The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP032125	Rhodobacteraceae bacterium BAR1 chromosome, complete genome	3558757	612445	620326	3558757	transposase	Klosneuvirus(33.33%)	7	NA	NA
AXX99667.1|612445_613042_-	ATP-binding cassette domain-containing protein	NA	A0A076FI99	Aureococcus_anophage	27.2	2.6e-06
AXX96988.1|613261_614446_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.3	2.3e-22
AXX96989.1|614442_615369_+	ornithine carbamoyltransferase	NA	M1I6M4	Paramecium_bursaria_Chlorella_virus	27.8	1.0e-20
AXX96990.1|615512_616273_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	34.6	3.4e-14
AXX96991.1|616316_617261_-	hypothetical protein	NA	NA	NA	NA	NA
AXX96992.1|617267_618923_-	energy-dependent translational throttle protein EttA	NA	A0A1V0SKJ1	Klosneuvirus	28.5	1.2e-45
AXX96993.1|618988_620326_-	hypothetical protein	NA	R9TRQ8	Vibrio_phage	30.0	5.0e-21
>prophage 2
CP032125	Rhodobacteraceae bacterium BAR1 chromosome, complete genome	3558757	788213	850040	3558757	tRNA,protease	Klosneuvirus(22.22%)	57	NA	NA
AXX97152.1|788213_789350_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AXX97153.1|789349_790219_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
AXX97154.1|790215_790410_+	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
AXX99681.1|790640_792026_+|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	29.9	1.7e-27
AXX97155.1|792173_793373_+	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
AXX97156.1|793401_793794_-	hypothetical protein	NA	NA	NA	NA	NA
AXX97157.1|793970_794489_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXX97158.1|794565_795534_-	threonine/serine dehydratase	NA	NA	NA	NA	NA
AXX97159.1|795534_796938_-	NADP-dependent phosphogluconate dehydrogenase	NA	A0A1D7RYH5	Synechococcus_phage	31.5	1.7e-27
AXX99682.1|796998_798114_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AXX97160.1|798219_798387_+	Tat pathway signal protein	NA	NA	NA	NA	NA
AXX97161.1|798551_799193_+	hypothetical protein	NA	NA	NA	NA	NA
AXX97162.1|799289_802271_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	35.2	3.7e-133
AXX97163.1|802358_803111_-	anti-sigma factor	NA	NA	NA	NA	NA
AXX99683.1|803107_803617_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
AXX97164.1|803683_804079_-	hypothetical protein	NA	NA	NA	NA	NA
AXX97165.1|804287_805343_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
AXX97166.1|805404_806271_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
AXX97167.1|806365_807286_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXX97168.1|807437_808469_+	hemolysin	NA	NA	NA	NA	NA
AXX97169.1|808544_809333_+	inositol monophosphatase	NA	NA	NA	NA	NA
AXX97170.1|809336_810260_-	AEC family transporter	NA	NA	NA	NA	NA
AXX97171.1|810261_810633_-	GFA family protein	NA	NA	NA	NA	NA
AXX97172.1|810629_811376_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
AXX97173.1|811502_812153_+	DUF3047 domain-containing protein	NA	NA	NA	NA	NA
AXX97174.1|812156_815576_-	bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	NA	NA	NA	NA	NA
AXX97175.1|815739_816204_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AXX97176.1|816494_817190_+	dTDP-6-deoxy-L-hexose 3-O-methyltransferase	NA	E3T537	Cafeteria_roenbergensis_virus	31.8	4.7e-23
AXX97177.1|817280_818426_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
AXX97178.1|818427_819813_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AXX97179.1|819816_821178_-	glutamine synthetase	NA	NA	NA	NA	NA
AXX97180.1|821245_822286_-	twin-arginine translocation signal domain-containing protein	NA	NA	NA	NA	NA
AXX97181.1|822353_823859_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
AXX97182.1|823858_824368_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
AXX97183.1|824355_825147_-	N-formylglutamate amidohydrolase	NA	NA	NA	NA	NA
AXX97184.1|825281_826154_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AXX97185.1|826500_827865_+	DUF4173 domain-containing protein	NA	NA	NA	NA	NA
AXX97186.1|827861_828548_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	38.6	3.1e-35
AXX97187.1|828535_829498_+	sensor histidine kinase	NA	NA	NA	NA	NA
AXX97188.1|829554_830241_-	HAD family hydrolase	NA	NA	NA	NA	NA
AXX97189.1|830241_830886_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AXX97190.1|830882_831428_-	thioredoxin family protein	NA	NA	NA	NA	NA
AXX99684.1|831516_832206_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AXX97191.1|832288_833677_-	ribulose-bisphosphate carboxylase	NA	NA	NA	NA	NA
AXX97192.1|833724_834789_-	fructose-bisphosphate aldolase class II	NA	NA	NA	NA	NA
AXX97193.1|834805_836011_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
AXX97194.1|836010_837012_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AXX97195.1|837024_838992_-	transketolase	NA	NA	NA	NA	NA
AXX97196.1|839004_839877_-	phosphoribulokinase	NA	NA	NA	NA	NA
AXX97197.1|839889_840897_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	34.1	2.9e-42
AXX97198.1|841002_841926_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXX97199.1|842013_843201_+	CoA transferase	NA	NA	NA	NA	NA
AXX97200.1|843200_844391_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXX97201.1|844387_845995_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.4	6.6e-28
AXX97202.1|845991_847701_-	hypothetical protein	NA	NA	NA	NA	NA
AXX97203.1|848006_848639_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	59.5	1.7e-59
AXX97204.1|848771_850040_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.7	6.6e-132
>prophage 3
CP032125	Rhodobacteraceae bacterium BAR1 chromosome, complete genome	3558757	1167508	1176386	3558757		uncultured_Mediterranean_phage(57.14%)	11	NA	NA
AXX99707.1|1167508_1168186_-	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	22.3	3.5e-07
AXX97492.1|1168432_1168657_+	Sec-independent protein translocase TatA	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	53.2	9.2e-05
AXX97493.1|1168697_1169282_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
AXX97494.1|1169278_1170229_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	36.2	3.2e-38
AXX97495.1|1170225_1171065_+	ATP-binding protein	NA	NA	NA	NA	NA
AXX97496.1|1171084_1172248_-	LysM peptidoglycan-binding domain-containing protein	NA	Q8SBN9	Clostridium_phage	37.0	7.9e-07
AXX97497.1|1172302_1172941_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	42.9	1.6e-25
AXX97498.1|1172937_1173726_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	34.4	4.1e-31
AXX97499.1|1173863_1174514_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXX97500.1|1174524_1174935_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AXX99708.1|1174931_1176386_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.2	8.0e-49
>prophage 4
CP032125	Rhodobacteraceae bacterium BAR1 chromosome, complete genome	3558757	2466006	2503201	3558757	head,terminase,capsid,portal,tail,protease	Acidithiobacillus_phage(37.5%)	49	NA	NA
AXX98618.1|2466006_2466681_-	DUF882 domain-containing protein	NA	A0A0K1LLY2	Rhodobacter_phage	46.4	6.3e-41
AXX98619.1|2466747_2467029_-	hypothetical protein	NA	K4I011	Acidithiobacillus_phage	51.6	2.7e-14
AXX98620.1|2467055_2468336_-	DUF2793 domain-containing protein	NA	A0A0B5A0F6	Paracoccus_phage	36.9	6.2e-29
AXX98621.1|2468332_2472280_-	hypothetical protein	NA	A0A0B5A7K5	Paracoccus_phage	42.1	4.1e-265
AXX98622.1|2472283_2472727_-	peptidase	NA	A0A1V0DYB6	Dinoroseobacter_phage	47.8	2.1e-29
AXX98623.1|2472723_2473611_-	DUF2163 domain-containing protein	NA	A0A0B5A5B8	Paracoccus_phage	46.9	1.0e-70
AXX98624.1|2473679_2473973_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
AXX98625.1|2473969_2474485_+	N-acetyltransferase	NA	NA	NA	NA	NA
AXX98626.1|2474496_2475123_-	TIGR02217 family protein	NA	A0A0B5A2K3	Paracoccus_phage	59.2	6.5e-64
AXX98627.1|2475123_2477256_-|tail	phage tail tape measure protein	tail	I6S2X0	Marinomonas_phage	38.7	3.4e-32
AXX98628.1|2477257_2477440_-	hypothetical protein	NA	G8DH53	Emiliania_huxleyi_virus	61.9	2.6e-05
AXX98629.1|2477478_2477916_-	hypothetical protein	NA	NA	NA	NA	NA
AXX98630.1|2477924_2478863_-	hypothetical protein	NA	G8DH51	Emiliania_huxleyi_virus	56.7	1.6e-98
AXX98631.1|2478918_2479350_-	acyl-CoA transferase	NA	G8DH50	Emiliania_huxleyi_virus	50.7	7.7e-32
AXX98632.1|2479382_2479727_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AXX98633.1|2479726_2479984_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
AXX98634.1|2480063_2480693_-	hypothetical protein	NA	G8DH49	Emiliania_huxleyi_virus	54.6	2.9e-56
AXX98635.1|2480689_2481001_-	hypothetical protein	NA	NA	NA	NA	NA
AXX98636.1|2481000_2482014_-|capsid	major capsid protein	capsid	K4I3Z3	Acidithiobacillus_phage	32.2	1.7e-37
AXX98637.1|2482029_2482407_-|head	head decoration protein	head	K4ICP8	Acidithiobacillus_phage	41.1	5.5e-10
AXX98638.1|2482413_2483358_-|protease	Clp protease ClpP	protease	K7PKX4	Enterobacterial_phage	42.0	2.3e-44
AXX99818.1|2483371_2484838_-|portal	phage portal protein	portal	K4I1F2	Acidithiobacillus_phage	55.8	3.0e-144
AXX98639.1|2484843_2485059_-	hypothetical protein	NA	A0A2H4JCJ9	uncultured_Caudovirales_phage	48.4	3.6e-06
AXX98640.1|2485492_2485783_+	transcriptional regulator	NA	NA	NA	NA	NA
AXX98641.1|2485787_2487734_-|terminase	phage terminase large subunit family protein	terminase	A0A2H4JIC6	uncultured_Caudovirales_phage	48.0	1.4e-152
AXX98642.1|2487636_2488206_-|terminase	terminase small subunit, Nu1	terminase	A0A2K9V2Q9	Faecalibacterium_phage	32.7	1.6e-13
AXX98643.1|2488308_2488503_+	hypothetical protein	NA	A0A1X9I6B9	Streptococcus_phage	53.7	2.9e-07
AXX98644.1|2488499_2488727_+	hypothetical protein	NA	NA	NA	NA	NA
AXX98645.1|2488819_2489050_+	hypothetical protein	NA	NA	NA	NA	NA
AXX98646.1|2489046_2489283_+	hypothetical protein	NA	NA	NA	NA	NA
AXX98647.1|2489279_2489786_+	DUF3489 domain-containing protein	NA	K4HZZ2	Acidithiobacillus_phage	55.1	3.6e-12
AXX98648.1|2489858_2490131_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
AXX98649.1|2490130_2490442_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AXX98650.1|2490377_2490644_-	hypothetical protein	NA	K4I1E3	Acidithiobacillus_phage	67.1	4.6e-19
AXX98651.1|2490656_2491781_-	DNA cytosine methyltransferase	NA	A0A0F7L3T9	uncultured_marine_virus	44.5	7.1e-37
AXX98652.1|2491786_2493016_-	DNA methylase N-4	NA	K4HZA5	Acidithiobacillus_phage	60.6	1.6e-135
AXX98653.1|2493413_2493806_-	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A1B3AYM0	Gordonia_phage	36.2	2.5e-05
AXX98654.1|2493802_2494027_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
AXX98655.1|2494092_2494533_-	hypothetical protein	NA	NA	NA	NA	NA
AXX99819.1|2494529_2494727_-	hypothetical protein	NA	NA	NA	NA	NA
AXX99820.1|2494732_2495221_-	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	65.6	5.2e-53
AXX98656.1|2495276_2495663_+	hypothetical protein	NA	NA	NA	NA	NA
AXX98657.1|2496037_2498374_-	hypothetical protein	NA	A0A1B2LRS1	Wolbachia_phage	52.2	2.9e-72
AXX99821.1|2498325_2499075_-	hypothetical protein	NA	K4HZA0	Acidithiobacillus_phage	52.5	9.8e-67
AXX98658.1|2499101_2499308_-	hypothetical protein	NA	NA	NA	NA	NA
AXX98659.1|2499521_2501225_-	helicase	NA	A0A2D1GP10	Streptomyces_phage	35.1	1.0e-42
AXX98660.1|2501237_2501825_-	hypothetical protein	NA	K4ICM8	Acidithiobacillus_phage	63.6	9.7e-54
AXX98661.1|2501843_2502719_-	ATP-binding protein	NA	K4HZX9	Acidithiobacillus_phage	63.8	3.3e-98
AXX99822.1|2502715_2503201_-	hypothetical protein	NA	K4HZ96	Acidithiobacillus_phage	42.2	9.6e-23
