assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	1	89825-89928	1	CRISPRCasFinder	no	csa3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Type I-A	TGGTGGGTGCGCTGCGCTTACCCACCCTACCATTCACC	38	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|315aa|up_7|CP027107.1_81295_82240_-,NA	NA|289aa|up_9|CP027107.1_80175_81042_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_8|CP027107.1_81043_81256_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|315aa|up_7|CP027107.1_81295_82240_-	NA	NA|500aa|up_6|CP027107.1_82485_83985_+	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component	NA|339aa|up_5|CP027107.1_84049_85066_+	PRK10014, PRK10014, DNA-binding transcriptional repressor MalI; Provisional	NA|462aa|up_4|CP027107.1_85285_86671_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|CP027107.1_86847_87342_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|CP027107.1_87345_88068_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|CP027107.1_88200_88710_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|CP027107.1_88706_89774_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|382aa|down_0|CP027107.1_90002_91148_-	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme	NA|457aa|down_1|CP027107.1_91159_92530_-	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase	NA|378aa|down_2|CP027107.1_92865_93999_+	PRK11784, PRK11784, tRNA 2-selenouridine synthase; Provisional	NA|805aa|down_3|CP027107.1_93988_96403_-	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|229aa|down_4|CP027107.1_96399_97086_-	PRK10584, PRK10584, putative ABC transporter ATP-binding protein YbbA; Provisional	NA|220aa|down_5|CP027107.1_97023_97683_+	PRK10528, PRK10528, multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional	NA|257aa|down_6|CP027107.1_97711_98482_+	PRK08017, PRK08017, SDR family oxidoreductase	NA|285aa|down_7|CP027107.1_98540_99395_+	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]	NA|306aa|down_8|CP027107.1_99504_100422_+	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]	NA|152aa|down_9|CP027107.1_100418_100874_+	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	2	158417-159360	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Type I-E	CGGTTTATCCCCGCTCGCGCGGGGAACAC,CGGTTTATCCCCGCTCGCGCGGGGAA,CGGTTTATCCCCGCTCGCGCGGGGAA	29,26,26	0	0	NA	NA	I-E:I-E:I-E	15,15,14	15	TypeI-E	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|74aa|up_2|CP027107.1_156135_156357_-,NA|84aa|up_1|CP027107.1_156353_156605_-,NA	NA|268aa|up_9|CP027107.1_148789_149593_+	cd13597, PBP2_lipoprotein_Tp32, The substrate-binding domain of the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum binds L-methionine; the type 2 periplasmic-binding protein fold	NA|264aa|up_8|CP027107.1_149589_150381_+	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|224aa|up_7|CP027107.1_150365_151037_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|519aa|up_6|CP027107.1_151201_152758_+	COG4943, COG4943, Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms]	NA|276aa|up_5|CP027107.1_152750_153578_-	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|206aa|up_4|CP027107.1_153634_154252_-	COG2364, COG2364, Predicted membrane protein [Function unknown]	NA|474aa|up_3|CP027107.1_154338_155760_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|74aa|up_2|CP027107.1_156135_156357_-	NA	NA|84aa|up_1|CP027107.1_156353_156605_-	NA	NA|153aa|up_0|CP027107.1_157327_157786_-	pfam12883, DUF3828, Protein of unknown function (DUF3828)	cas2|98aa|down_0|CP027107.1_159456_159750_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|down_1|CP027107.1_159749_160667_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|CP027107.1_160663_161314_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|251aa|down_3|CP027107.1_161295_162048_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|358aa|down_4|CP027107.1_162057_163131_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|202aa|down_5|CP027107.1_163142_163748_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|523aa|down_6|CP027107.1_163748_165317_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|878aa|down_7|CP027107.1_165669_168303_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|104aa|down_8|CP027107.1_168508_168820_+	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|191aa|down_9|CP027107.1_168851_169424_-	COG3126, COG3126, Uncharacterized protein conserved in bacteria [Function unknown]
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	3	185528-186289	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Unclear	CGGTTTATCCCCGCTCGCGCGGGGAACGG,CGGTTTATCCCCGCTCGCGCGGGGAACGG,CCGT---TCCCCGCGCGAGCGGGGATAAACC	29,29,31	0	0	NA	NA	I-E:I-E:I-E	12,12,12	12	Unclear	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|146aa|up_5|CP027107.1_178181_178619_+,NA|185aa|up_4|CP027107.1_180565_181120_+,NA	NA|593aa|up_9|CP027107.1_172559_174338_-	PRK10790, PRK10790, SmdB family multidrug efflux ABC transporter permease/ATP-binding protein	NA|592aa|up_8|CP027107.1_174330_176106_-	PRK10789, PRK10789, SmdA family multidrug ABC transporter permease/ATP-binding protein	NA|154aa|up_7|CP027107.1_176163_176625_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|349aa|up_6|CP027107.1_176740_177787_+	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism]	NA|146aa|up_5|CP027107.1_178181_178619_+	NA	NA|185aa|up_4|CP027107.1_180565_181120_+	NA	NA|273aa|up_3|CP027107.1_181159_181978_-	PRK15126, PRK15126, HMP-PP phosphatase	NA|577aa|up_2|CP027107.1_182069_183800_+	COG4533, COG4533, ABC-type uncharacterized transport system, periplasmic component [General function prediction only]	NA|232aa|up_1|CP027107.1_183829_184525_+	PRK11106, PRK11106, queuosine biosynthesis protein QueC; Provisional	NA|279aa|up_0|CP027107.1_184517_185354_-	cd07742, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|133aa|down_0|CP027107.1_186503_186902_-	TIGR00051, Acyl-CoA_thioesterase_YbgC, acyl-CoA thioester hydrolase, YbgC/YbaW family	NA|123aa|down_1|CP027107.1_187025_187394_-	TIGR00426, Hypothetical_protein_ybaV_precursor	NA|626aa|down_2|CP027107.1_187540_189418_-	PRK10788, PRK10788, periplasmic folding chaperone; Provisional	NA|91aa|down_3|CP027107.1_189633_189906_-	cd13831, HU, histone-like DNA-binding protein HU	NA|785aa|down_4|CP027107.1_190115_192470_-	PRK10787, PRK10787, DNA-binding ATP-dependent protease La; Provisional	NA|425aa|down_5|CP027107.1_192656_193931_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|208aa|down_6|CP027107.1_194054_194678_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|433aa|down_7|CP027107.1_194978_196277_-	PRK01490, tig, trigger factor; Provisional	NA|106aa|down_8|CP027107.1_196627_196945_-	PRK11628, PRK11628, transcriptional regulator BolA; Provisional	NA|193aa|down_9|CP027107.1_197243_197822_+	PRK11627, PRK11627, hypothetical protein; Provisional
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	4	402504-402625	4	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	AGTCAAACTCCAGTTCCACCTGCTCCGAACC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA	NA|141aa|up_9|CP027107.1_393527_393950_-	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|182aa|up_8|CP027107.1_393946_394492_-	pfam07152, YaeQ, YaeQ protein	NA|67aa|up_7|CP027107.1_394698_394899_+	PRK04964, PRK04964, hypothetical protein; Provisional	NA|87aa|up_6|CP027107.1_394885_395146_+	PRK11625, PRK11625, Rho-binding antiterminator; Provisional	NA|105aa|up_5|CP027107.1_395193_395508_-	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|435aa|up_4|CP027107.1_395500_396805_-	PRK10660, tilS, tRNA(Ile)-lysidine synthetase; Provisional	NA|130aa|up_3|CP027107.1_396869_397259_-	PRK11478, PRK11478, VOC family protein	NA|713aa|up_2|CP027107.1_397316_399455_-	PRK15399, PRK15399, lysine decarboxylase	NA|588aa|up_1|CP027107.1_399602_401366_-	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain	NA|320aa|up_0|CP027107.1_401529_402489_-	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|199aa|down_0|CP027107.1_406104_406701_-	PRK00015, rnhB, ribonuclease HII; Validated	NA|381aa|down_1|CP027107.1_406697_407840_-	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed	NA|263aa|down_2|CP027107.1_407839_408628_-	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA|152aa|down_3|CP027107.1_408631_409087_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|342aa|down_4|CP027107.1_409203_410229_-	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional	NA|165aa|down_5|CP027107.1_410232_410727_-	PRK10780, PRK10780, molecular chaperone Skp	NA|805aa|down_6|CP027107.1_410849_413264_-	PRK11067, PRK11067, outer membrane protein assembly factor YaeT; Provisional	NA|451aa|down_7|CP027107.1_413294_414647_-	PRK10779, PRK10779, sigma E protease regulator RseP	NA|286aa|down_8|CP027107.1_414658_415516_-	PRK11624, cdsA, phosphatidate cytidylyltransferase	NA|253aa|down_9|CP027107.1_415528_416287_-	PRK10240, PRK10240, (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	5	462753-463020	5,3,3	CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	4,4,3	4	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA|127aa|down_4|CP027107.1_466106_466487_+	NA|265aa|up_9|CP027107.1_451534_452329_+	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|285aa|up_8|CP027107.1_452341_453196_+	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed	NA|127aa|up_7|CP027107.1_453293_453674_+	PRK05449, PRK05449, aspartate alpha-decarboxylase; Provisional	NA|416aa|up_6|CP027107.1_453718_454966_-	cd10966, CE4_yadE_5s, Putative catalytic polysaccharide deacetylase domain of uncharacterized protein yadE and similar proteins	NA|257aa|up_5|CP027107.1_455130_455901_-	PRK15066, PRK15066, inner membrane transport permease; Provisional	NA|309aa|up_4|CP027107.1_455897_456824_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|221aa|up_3|CP027107.1_456932_457595_+	PRK10437, PRK10437, carbonic anhydrase; Provisional	NA|179aa|up_2|CP027107.1_457649_458186_-	PRK15423, PRK15423, hypoxanthine phosphoribosyltransferase; Provisional	NA|799aa|up_1|CP027107.1_458378_460775_+	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|521aa|up_0|CP027107.1_461104_462667_-	PRK10965, PRK10965, multicopper oxidase; Provisional	NA|116aa|down_0|CP027107.1_463397_463745_+	pfam09691, T2SS_PulS_OutS, Type II secretion system pilotin lipoprotein (PulS_OutS)	NA|284aa|down_1|CP027107.1_463868_464720_+	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|265aa|down_2|CP027107.1_464734_465529_+	PRK05462, PRK05462, adenosylmethionine decarboxylase	NA|122aa|down_3|CP027107.1_465557_465923_-	PRK05248, PRK05248, hypothetical protein; Provisional	NA|127aa|down_4|CP027107.1_466106_466487_+	NA	NA|866aa|down_5|CP027107.1_466573_469171_-	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|495aa|down_6|CP027107.1_470077_471562_+	pfam11737, DUF3300, Protein of unknown function (DUF3300)	NA|265aa|down_7|CP027107.1_471575_472370_+	pfam11453, DUF2950, Protein of unknown function (DUF2950)	NA|244aa|down_8|CP027107.1_472425_473157_-	PRK13731, PRK13731, complement resistance protein TraT	NA|475aa|down_9|CP027107.1_473471_474896_-	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	6	723771-723847	6	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GCATGTCCTCCGTAGGGCGGGTAAGC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA|156aa|down_2|CP027107.1_727769_728237_-,NA|30aa|down_5|CP027107.1_730472_730562_+	NA|84aa|up_9|CP027107.1_706589_706841_+	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding	NA|362aa|up_8|CP027107.1_706972_708058_+	pfam14072, DndB, DNA-sulfur modification-associated	NA|545aa|up_7|CP027107.1_708054_709689_+	PRK06850, PRK06850, hypothetical protein; Provisional	NA|667aa|up_6|CP027107.1_709678_711679_+	TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD	NA|118aa|up_5|CP027107.1_711678_712032_+	pfam08870, DndE, DNA sulphur modification protein DndE	NA|597aa|up_4|CP027107.1_712075_713866_-	pfam03235, DUF262, Protein of unknown function DUF262	NA|1691aa|up_3|CP027107.1_713883_718956_-	TIGR03237, dnd_assoc_2, DNA phosphorothioation-dependent restriction protein DptH	NA|441aa|up_2|CP027107.1_718936_720259_-	TIGR03236, dnd_assoc_1, DNA phosphorothioation-dependent restriction protein DptG	NA|550aa|up_1|CP027107.1_720263_721913_-	TIGR03238, dnd_assoc_3, DNA phosphorothioation-dependent restriction protein DptF	NA|340aa|up_0|CP027107.1_722559_723579_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|555aa|down_0|CP027107.1_723886_725551_-	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ	NA|548aa|down_1|CP027107.1_726065_727709_-	TIGR02361, Dihydroxyacetone_kinase_1, dihydroxyacetone kinase, ATP-dependent	NA|156aa|down_2|CP027107.1_727769_728237_-	NA	NA|361aa|down_3|CP027107.1_728301_729384_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|371aa|down_4|CP027107.1_729370_730483_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|30aa|down_5|CP027107.1_730472_730562_+	NA	NA|504aa|down_6|CP027107.1_730752_732264_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|154aa|down_7|CP027107.1_732524_732986_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_8|CP027107.1_732988_735844_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|401aa|down_9|CP027107.1_735960_737163_-	COG4269, COG4269, Predicted membrane protein [Function unknown]
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	7	732285-732376	7	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GCGCTTCGCTTACCCACCCTACCAAACA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|156aa|up_4|CP027107.1_727769_728237_-,NA|30aa|up_1|CP027107.1_730472_730562_+,NA|269aa|down_4|CP027107.1_737907_738714_-	NA|441aa|up_9|CP027107.1_718936_720259_-	TIGR03236, dnd_assoc_1, DNA phosphorothioation-dependent restriction protein DptG	NA|550aa|up_8|CP027107.1_720263_721913_-	TIGR03238, dnd_assoc_3, DNA phosphorothioation-dependent restriction protein DptF	NA|340aa|up_7|CP027107.1_722559_723579_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|555aa|up_6|CP027107.1_723886_725551_-	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ	NA|548aa|up_5|CP027107.1_726065_727709_-	TIGR02361, Dihydroxyacetone_kinase_1, dihydroxyacetone kinase, ATP-dependent	NA|156aa|up_4|CP027107.1_727769_728237_-	NA	NA|361aa|up_3|CP027107.1_728301_729384_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|371aa|up_2|CP027107.1_729370_730483_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|30aa|up_1|CP027107.1_730472_730562_+	NA	NA|504aa|up_0|CP027107.1_730752_732264_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|154aa|down_0|CP027107.1_732524_732986_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|CP027107.1_732988_735844_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|401aa|down_2|CP027107.1_735960_737163_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|CP027107.1_737357_737861_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|269aa|down_4|CP027107.1_737907_738714_-	NA	NA|255aa|down_5|CP027107.1_738758_739523_-	pfam06175, MiaE, tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)	NA|140aa|down_6|CP027107.1_739570_739990_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_7|CP027107.1_740153_741158_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_8|CP027107.1_741492_741945_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|407aa|down_9|CP027107.1_742616_743837_+	PRK01388, PRK01388, arginine deiminase; Provisional
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	8	741190-741428	4	PILER-CR	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	ATGGTGGGTGCGCTTCGCTTACCCACCCTACAAAACAACGCTCACCGTAGGGCGGGTAAGC	61	0	0	NA	NA	NA	2	2	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|30aa|up_9|CP027107.1_730472_730562_+,NA|269aa|up_3|CP027107.1_737907_738714_-,NA	NA|30aa|up_9|CP027107.1_730472_730562_+	NA	NA|504aa|up_8|CP027107.1_730752_732264_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|154aa|up_7|CP027107.1_732524_732986_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|up_6|CP027107.1_732988_735844_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|401aa|up_5|CP027107.1_735960_737163_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|up_4|CP027107.1_737357_737861_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|269aa|up_3|CP027107.1_737907_738714_-	NA	NA|255aa|up_2|CP027107.1_738758_739523_-	pfam06175, MiaE, tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)	NA|140aa|up_1|CP027107.1_739570_739990_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|up_0|CP027107.1_740153_741158_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_0|CP027107.1_741492_741945_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|407aa|down_1|CP027107.1_742616_743837_+	PRK01388, PRK01388, arginine deiminase; Provisional	NA|304aa|down_2|CP027107.1_743847_744759_+	PRK12354, PRK12354, carbamate kinase; Reviewed	NA|335aa|down_3|CP027107.1_744795_745800_+	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated	NA|468aa|down_4|CP027107.1_745848_747252_+	COG1288, COG1288, Predicted membrane protein [Function unknown]	NA|160aa|down_5|CP027107.1_747420_747900_+	COG1438, ArgR, Arginine repressor [Transcription]	NA|312aa|down_6|CP027107.1_748153_749089_+	COG0540, PyrB, Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism]	NA|154aa|down_7|CP027107.1_749099_749561_+	PRK00893, PRK00893, aspartate carbamoyltransferase regulatory subunit; Reviewed	NA|129aa|down_8|CP027107.1_749634_750021_+	PRK11401, PRK11401, enamine/imine deaminase	NA|718aa|down_9|CP027107.1_750073_752227_-	PRK01254, PRK01254, YgiQ family radical SAM protein
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	9	1126517-1126589	8	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GCGCTTCGCTTACCCGCCCTACG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA	NA|226aa|up_9|CP027107.1_1116515_1117193_-	PRK11536, PRK11536, 6-N-hydroxylaminopurine resistance protein; Provisional	NA|207aa|up_8|CP027107.1_1117263_1117884_-	PRK10925, PRK10925, superoxide dismutase [Mn]	NA|346aa|up_7|CP027107.1_1118256_1119294_+	pfam06379, RhaT, L-rhamnose-proton symport protein (RhaT)	NA|284aa|up_6|CP027107.1_1119290_1120142_-	PRK13501, PRK13501, HTH-type transcriptional activator RhaR	NA|279aa|up_5|CP027107.1_1120213_1121050_-	PRK13503, PRK13503, HTH-type transcriptional activator RhaS	NA|491aa|up_4|CP027107.1_1121351_1122824_+	PRK10640, rhaB, rhamnulokinase; Provisional	NA|419aa|up_3|CP027107.1_1122820_1124077_+	PRK01076, PRK01076, L-rhamnose isomerase; Provisional	NA|275aa|up_2|CP027107.1_1124086_1124911_+	PRK03634, PRK03634, rhamnulose-1-phosphate aldolase; Provisional	NA|383aa|up_1|CP027107.1_1125031_1126180_+	cd08188, PDDH, 1,3-Propanediol (1,3-PD) dehydrogenase	NA|105aa|up_0|CP027107.1_1126176_1126491_+	TIGR02625, L-rhamnose_mutarotase, L-rhamnose mutarotase	NA|421aa|down_0|CP027107.1_1126673_1127936_-	PRK09528, lacY, galactoside permease; Reviewed	NA|708aa|down_1|CP027107.1_1127993_1130117_-	COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism]	NA|336aa|down_2|CP027107.1_1130234_1131242_-	cd20010, PBP1_AglR-like, Ligand-binding domain of DNA transcription repressor specific for alpha-glucosides (AglR) and similar proteins	NA|183aa|down_3|CP027107.1_1131317_1131866_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|220aa|down_4|CP027107.1_1131971_1132631_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|108aa|down_5|CP027107.1_1132630_1132954_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|70aa|down_6|CP027107.1_1132992_1133202_-	pfam07338, DUF1471, Protein of unknown function (DUF1471)	NA|281aa|down_7|CP027107.1_1133332_1134175_-	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD	NA|196aa|down_8|CP027107.1_1134340_1134928_+	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit	NA|805aa|down_9|CP027107.1_1134976_1137391_+	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	10	1471982-1472103	9	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GGTGGATGCGCTGCGCTTATCCACCCTACGAA	32	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA	NA|210aa|up_9|CP027107.1_1459209_1459839_+	COG5571, COG5571, Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion [Cell motility and secretion]	NA|401aa|up_8|CP027107.1_1459995_1461198_+	TIGR00890, Uncharacterized_MFS-type_transporter_YhjX, oxalate/formate antiporter family transporter	NA|144aa|up_7|CP027107.1_1461316_1461748_+	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|560aa|up_6|CP027107.1_1461961_1463641_+	PRK11560, PRK11560, kdo(2)-lipid A phosphoethanolamine 7''-transferase	NA|153aa|up_5|CP027107.1_1464037_1464496_-	pfam07007, LprI, Lysozyme inhibitor LprI	NA|536aa|up_4|CP027107.1_1466171_1467779_+	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|340aa|up_3|CP027107.1_1467974_1468994_+	PRK10914, PRK10914, dipeptide ABC transporter permease DppB	NA|301aa|up_2|CP027107.1_1469003_1469906_+	PRK10913, PRK10913, dipeptide ABC transporter permease DppC	NA|332aa|up_1|CP027107.1_1469917_1470913_+	PRK11022, dppD, dipeptide transporter ATP-binding subunit; Provisional	NA|338aa|up_0|CP027107.1_1470899_1471913_+	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional	NA|562aa|down_0|CP027107.1_1472124_1473810_-	pfam11658, CBP_BcsG, Cellulose biosynthesis protein BcsG	NA|66aa|down_1|CP027107.1_1473802_1474000_-	pfam11120, CBP_BcsF, Cellulose biosynthesis protein BcsF	NA|525aa|down_2|CP027107.1_1473996_1475571_-	pfam10995, CBP_GIL, GGDEF I-site like or GIL domain	NA|68aa|down_3|CP027107.1_1475739_1475943_+	pfam10945, CBP_BcsR, Cellulose biosynthesis protein BcsR	NA|232aa|down_4|CP027107.1_1475939_1476635_+	pfam06564, CBP_BcsQ, Cellulose biosynthesis protein BcsQ	NA|873aa|down_5|CP027107.1_1476664_1479283_+	PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional	NA|811aa|down_6|CP027107.1_1479293_1481726_+	PRK11114, PRK11114, cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA|372aa|down_7|CP027107.1_1481732_1482848_+	PRK11097, PRK11097, cellulase	NA|1168aa|down_8|CP027107.1_1482829_1486333_+	PRK11447, PRK11447, cellulose synthase subunit BcsC; Provisional	NA|642aa|down_9|CP027107.1_1486489_1488415_+	PRK13561, PRK13561, putative diguanylate cyclase; Provisional
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	11	1592385-1592466	10	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GGGTGCGCTGCGCTTACCCACCCTAC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA|66aa|down_5|CP027107.1_1599781_1599979_-	NA|801aa|up_9|CP027107.1_1581478_1583881_+	PRK14985, PRK14985, maltodextrin phosphorylase; Provisional	NA|703aa|up_8|CP027107.1_1583891_1586000_+	PRK11052, malQ, 4-alpha-glucanotransferase; Provisional	NA|71aa|up_7|CP027107.1_1586269_1586482_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|192aa|up_6|CP027107.1_1586641_1587217_-	PRK11190, PRK11190, iron-sulfur cluster biogenesis protein NfuA	NA|226aa|up_5|CP027107.1_1587275_1587953_-	PRK11595, PRK11595, DNA utilization protein GntX; Provisional	NA|260aa|up_4|CP027107.1_1587992_1588772_+	PRK10349, PRK10349, pimeloyl-ACP methyl ester esterase BioH	NA|90aa|up_3|CP027107.1_1588853_1589123_+	PRK09929, PRK09929, hypothetical protein; Provisional	NA|79aa|up_2|CP027107.1_1589168_1589405_-	PRK15431, PRK15431, [Fe-S]-dependent transcriptional repressor FeoC	NA|772aa|up_1|CP027107.1_1589404_1591720_-	PRK09554, feoB, Fe(2+) transporter permease subunit FeoB	NA|75aa|up_0|CP027107.1_1591746_1591971_-	PRK09555, feoA, ferrous iron transporter A	NA|776aa|down_0|CP027107.1_1592584_1594912_-	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|158aa|down_1|CP027107.1_1595024_1595498_-	PRK01885, greB, transcription elongation factor GreB; Reviewed	NA|240aa|down_2|CP027107.1_1595839_1596559_+	PRK09468, ompR, osmolarity response regulator; Provisional	NA|449aa|down_3|CP027107.1_1596555_1597902_+	PRK09467, envZ, osmolarity sensor protein; Provisional	NA|540aa|down_4|CP027107.1_1597962_1599582_-	TIGR00224, Phosphoenolpyruvate_carboxykinase, phosphoenolpyruvate carboxykinase (ATP)	NA|66aa|down_5|CP027107.1_1599781_1599979_-	NA	NA|563aa|down_6|CP027107.1_1600010_1601699_+	pfam13687, DUF4153, Domain of unknown function (DUF4153)	NA|293aa|down_7|CP027107.1_1601747_1602626_-	PRK00114, hslO, Hsp33 family molecular chaperone HslO	NA|134aa|down_8|CP027107.1_1602649_1603051_-	PRK10348, PRK10348, ribosome-associated heat shock protein Hsp15; Provisional	NA|227aa|down_9|CP027107.1_1603050_1603731_-	PRK14988, PRK14988, GMP/IMP nucleotidase; Provisional
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	12	2048566-2048669	11	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GTAGGGTGGGTAAGCGCAGCGCACCCACCGG	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|63aa|up_5|CP027107.1_2042837_2043026_-,NA|66aa|up_2|CP027107.1_2044579_2044777_-,NA	NA|195aa|up_9|CP027107.1_2038348_2038933_+	PRK01736, PRK01736, hypothetical protein; Reviewed	NA|439aa|up_8|CP027107.1_2038956_2040273_+	PRK10879, PRK10879, proline aminopeptidase P II; Provisional	NA|393aa|up_7|CP027107.1_2040269_2041448_+	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated	NA|401aa|up_6|CP027107.1_2041458_2042661_+	PRK08013, PRK08013, oxidoreductase; Provisional	NA|63aa|up_5|CP027107.1_2042837_2043026_-	NA	NA|366aa|up_4|CP027107.1_2043083_2044181_+	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|130aa|up_3|CP027107.1_2044204_2044594_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|66aa|up_2|CP027107.1_2044579_2044777_-	NA	NA|958aa|up_1|CP027107.1_2044723_2047597_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|248aa|up_0|CP027107.1_2047764_2048508_+	PRK09730, PRK09730, SDR family oxidoreductase	NA|478aa|down_0|CP027107.1_2048722_2050156_-	PRK15014, PRK15014, 6-phospho-beta-glucosidase BglA; Provisional	NA|243aa|down_1|CP027107.1_2050307_2051036_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|105aa|down_2|CP027107.1_2051211_2051526_+	PRK04980, PRK04980, hypothetical protein; Provisional	NA|218aa|down_3|CP027107.1_2051668_2052322_+	PRK15087, PRK15087, hemolysin; Provisional	NA|330aa|down_4|CP027107.1_2052426_2053416_-	PRK09559, PRK09559, putative global regulator; Reviewed	NA|89aa|down_5|CP027107.1_2053693_2053960_+	PRK10878, PRK10878, FAD assembly factor SdhE	NA|139aa|down_6|CP027107.1_2053940_2054357_+	pfam07254, Cpta_toxin, Membrane-bound toxin component of toxin-antitoxin system	NA|174aa|down_7|CP027107.1_2054370_2054892_-	PRK12359, PRK12359, flavodoxin FldB; Provisional	NA|299aa|down_8|CP027107.1_2054993_2055890_+	PRK00283, xerD, tyrosine recombinase	NA|240aa|down_9|CP027107.1_2055912_2056632_+	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	13	2420360-2420493	12	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	TTCGTGGTTTTGTAGGGTGGGTAAGCGAAGCGCACCCACC	40	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|123aa|up_4|CP027107.1_2413721_2414090_+,NA	NA|1039aa|up_9|CP027107.1_2406637_2409754_-	PRK10555, PRK10555, multidrug efflux RND transporter permease AcrD	NA|215aa|up_8|CP027107.1_2409888_2410533_-	PRK10403, PRK10403, nitrate/nitrite response regulator protein NarP	NA|192aa|up_7|CP027107.1_2410729_2411305_+	PRK15009, PRK15009, GDP-mannose pyrophosphatase NudK; Provisional	NA|348aa|up_6|CP027107.1_2411434_2412478_+	pfam06674, DUF1176, Protein of unknown function (DUF1176)	NA|316aa|up_5|CP027107.1_2412553_2413501_+	COG0026, PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]	NA|123aa|up_4|CP027107.1_2413721_2414090_+	NA	NA|166aa|up_3|CP027107.1_2414089_2414587_+	pfam12883, DUF3828, Protein of unknown function (DUF3828)	NA|665aa|up_2|CP027107.1_2414780_2416775_-	PRK12753, PRK12753, transketolase; Reviewed	NA|317aa|up_1|CP027107.1_2416795_2417746_-	PRK12346, PRK12346, transaldolase A; Provisional	NA|760aa|up_0|CP027107.1_2418027_2420307_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|262aa|down_0|CP027107.1_2420526_2421312_-	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein	NA|331aa|down_1|CP027107.1_2421314_2422307_-	PRK10440, PRK10440, iron-enterobactin ABC transporter permease	NA|336aa|down_2|CP027107.1_2422303_2423311_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|415aa|down_3|CP027107.1_2423418_2424663_+	PRK10489, PRK10489, enterobactin transporter EntS	NA|320aa|down_4|CP027107.1_2424688_2425648_-	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional	NA|389aa|down_5|CP027107.1_2425834_2427001_+	PRK15016, PRK15016, isochorismate synthase EntC; Provisional	NA|535aa|down_6|CP027107.1_2427011_2428616_+	PRK10946, entE, (2,3-dihydroxybenzoyl)adenylate synthase	NA|290aa|down_7|CP027107.1_2428625_2429495_+	COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|251aa|down_8|CP027107.1_2429491_2430244_+	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	NA|138aa|down_9|CP027107.1_2430244_2430658_+	PRK10254, PRK10254, proofreading thioesterase EntH
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	14	2627528-2627617	13	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GCTTCGCTTACCCACCCTACGGCC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA|64aa|down_1|CP027107.1_2630050_2630242_-	NA|144aa|up_9|CP027107.1_2617614_2618046_-	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|327aa|up_8|CP027107.1_2618060_2619041_-	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown]	NA|227aa|up_7|CP027107.1_2619174_2619855_+	PRK15479, PRK15479, transcriptional regulator TctD	NA|479aa|up_6|CP027107.1_2619835_2621272_+	pfam08521, 2CSK_N, Two-component sensor kinase N-terminal	NA|181aa|up_5|CP027107.1_2621413_2621956_+	pfam07437, YfaZ, YfaZ precursor	NA|399aa|up_4|CP027107.1_2622049_2623246_+	PRK03673, PRK03673, nicotinamide mononucleotide deamidase-related protein YfaY	NA|451aa|up_3|CP027107.1_2623582_2624935_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|353aa|up_2|CP027107.1_2624944_2626003_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|85aa|up_1|CP027107.1_2626093_2626348_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|CP027107.1_2626349_2627480_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|CP027107.1_2627653_2629939_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|64aa|down_1|CP027107.1_2630050_2630242_-	NA	NA|244aa|down_2|CP027107.1_2630291_2631023_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|879aa|down_3|CP027107.1_2631182_2633819_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|950aa|down_4|CP027107.1_2634004_2636854_+	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC	NA|217aa|down_5|CP027107.1_2637024_2637675_-	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional	NA|885aa|down_6|CP027107.1_2637691_2640346_-	PRK10618, PRK10618, phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional	NA|380aa|down_7|CP027107.1_2641182_2642322_+	PRK10554, PRK10554, outer membrane porin protein C; Provisional	NA|344aa|down_8|CP027107.1_2642418_2643450_+	PRK10461, PRK10461, thiamine biosynthesis lipoprotein ApbE; Provisional	NA|355aa|down_9|CP027107.1_2643522_2644587_+	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	15	2750593-2750670	14	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	CGCTTACCCGCCCTACGAAAACC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|191aa|up_6|CP027107.1_2743687_2744260_+,NA|61aa|up_5|CP027107.1_2744307_2744490_+,NA|43aa|down_9|CP027107.1_2764133_2764262_-	NA|575aa|up_9|CP027107.1_2740587_2742312_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|133aa|up_8|CP027107.1_2742671_2743070_-	COG5455, COG5455, Predicted integral membrane protein [Function unknown]	NA|106aa|up_7|CP027107.1_2743229_2743547_+	pfam07377, DUF1493, Protein of unknown function (DUF1493)	NA|191aa|up_6|CP027107.1_2743687_2744260_+	NA	NA|61aa|up_5|CP027107.1_2744307_2744490_+	NA	NA|266aa|up_4|CP027107.1_2744699_2745497_+	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated	NA|267aa|up_3|CP027107.1_2745483_2746284_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|351aa|up_2|CP027107.1_2746431_2747484_+	PRK09250, PRK09250, class I fructose-bisphosphate aldolase	NA|300aa|up_1|CP027107.1_2747928_2748828_-	PRK13054, PRK13054, lipid kinase; Reviewed	NA|454aa|up_0|CP027107.1_2749078_2750440_-	PRK15452, PRK15452, putative protease; Provisional	NA|241aa|down_0|CP027107.1_2750925_2751648_-	PRK10710, PRK10710, DNA-binding transcriptional regulator BaeR; Provisional	NA|475aa|down_1|CP027107.1_2751644_2753069_-	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS	NA|472aa|down_2|CP027107.1_2753065_2754481_-	PRK10504, PRK10504, putative transporter; Provisional	NA|1030aa|down_3|CP027107.1_2754484_2757574_-	PRK10614, PRK10614, multidrug efflux system subunit MdtC; Provisional	NA|1041aa|down_4|CP027107.1_2757574_2760697_-	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA|416aa|down_5|CP027107.1_2760696_2761944_-	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|121aa|down_6|CP027107.1_2762174_2762537_+	COG4683, COG4683, Uncharacterized protein conserved in bacteria [Function unknown]	NA|99aa|down_7|CP027107.1_2762523_2762820_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|451aa|down_8|CP027107.1_2762829_2764182_-	PRK11678, PRK11678, putative chaperone; Provisional	NA|43aa|down_9|CP027107.1_2764133_2764262_-	NA
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	16	3122250-3122327	15	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GGTGGGTAAGCGCAGCGCACCCACC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA	NA|132aa|up_9|CP027107.1_3113202_3113598_+	PRK10278, PRK10278, SirB family protein	NA|270aa|up_8|CP027107.1_3113594_3114404_+	PRK10941, PRK10941, tetratricopeptide repeat-containing protein	NA|285aa|up_7|CP027107.1_3114444_3115299_+	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional	NA|368aa|up_6|CP027107.1_3115543_3116647_-	PRK10599, PRK10599, sodium-potassium/proton antiporter ChaA	NA|77aa|up_5|CP027107.1_3116921_3117152_+	PRK09582, chaB, putative cation transport regulator ChaB	NA|233aa|up_4|CP027107.1_3117369_3118068_+	COG3703, ChaC, Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism]	NA|82aa|up_3|CP027107.1_3118098_3118344_-	pfam08980, DUF1883, Domain of unknown function (DUF1883)	NA|596aa|up_2|CP027107.1_3118553_3120341_-	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|118aa|up_1|CP027107.1_3120488_3120842_-	COG1553, DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]	NA|401aa|up_0|CP027107.1_3120913_3122116_+	pfam08376, NIT, Nitrate and nitrite sensing	NA|417aa|down_0|CP027107.1_3122796_3124047_+	pfam13379, NMT1_2, NMT1-like family	NA|294aa|down_1|CP027107.1_3124056_3124938_+	TIGR01183, Nitrate_transport_permease_protein_NrtB, nitrate ABC transporter, permease protein	NA|263aa|down_2|CP027107.1_3124947_3125736_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|1356aa|down_3|CP027107.1_3125745_3129813_+	PRK14989, PRK14989, nitrite reductase subunit NirD; Provisional	NA|901aa|down_4|CP027107.1_3129809_3132512_+	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite	NA|184aa|down_5|CP027107.1_3132407_3132959_-	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|472aa|down_6|CP027107.1_3133137_3134553_+	PRK10177, PRK10177, YchO/YchP family invasin	NA|217aa|down_7|CP027107.1_3134549_3135200_-	PRK10651, PRK10651, transcriptional regulator NarL; Provisional	NA|603aa|down_8|CP027107.1_3135192_3137001_-	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX	NA|464aa|down_9|CP027107.1_3137313_3138705_+	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	18	3896135-3896214	17	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GGTGGGTAAGCGTCAGCGCACCCACCA	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA|67aa|down_1|CP027107.1_3899350_3899551_+,NA|75aa|down_9|CP027107.1_3907927_3908152_+	NA|181aa|up_9|CP027107.1_3886134_3886677_-	PRK00431, PRK00431, ADP-ribose-binding protein	NA|101aa|up_8|CP027107.1_3886749_3887052_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|159aa|up_7|CP027107.1_3887246_3887723_-	pfam06496, DUF1097, Protein of unknown function (DUF1097)	NA|189aa|up_6|CP027107.1_3887833_3888400_-	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only]	NA|246aa|up_5|CP027107.1_3888424_3889162_-	PRK09248, PRK09248, putative hydrolase; Validated	NA|314aa|up_4|CP027107.1_3889234_3890176_-	PRK15469, ghrA, glyoxylate/hydroxypyruvate reductase GhrA	NA|347aa|up_3|CP027107.1_3890261_3891302_-	PRK15206, PRK15206, long polar fimbrial protein LpfD; Provisional	NA|849aa|up_2|CP027107.1_3891318_3893865_-	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|230aa|up_1|CP027107.1_3893888_3894578_-	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|178aa|up_0|CP027107.1_3894657_3895191_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|775aa|down_0|CP027107.1_3896242_3898567_-	PRK09939, PRK09939, acid resistance putative oxidoreductase YdeP	NA|67aa|down_1|CP027107.1_3899350_3899551_+	NA	NA|356aa|down_2|CP027107.1_3899661_3900729_-	PRK10536, PRK10536, phosphate starvation-inducible protein PhoH	NA|428aa|down_3|CP027107.1_3900988_3902272_-	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme	NA|376aa|down_4|CP027107.1_3902277_3903405_-	PRK10378, PRK10378, inactive ferrous ion transporter periplasmic protein EfeO; Provisional	NA|277aa|down_5|CP027107.1_3903460_3904291_-	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein	NA|395aa|down_6|CP027107.1_3904648_3905833_+	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|141aa|down_7|CP027107.1_3905862_3906285_-	pfam12098, DUF3574, Protein of unknown function (DUF3574)	NA|503aa|down_8|CP027107.1_3906402_3907911_-	PRK15419, PRK15419, sodium/proline symporter PutP	NA|75aa|down_9|CP027107.1_3907927_3908152_+	NA
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	20	4147813-4147889	19	CRISPRCasFinder	no	DinG	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Type IV-A	GGTTTTCGTAGGGCGGGTAAGCG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA	NA|179aa|up_9|CP027107.1_4134260_4134797_+	PRK15289, lpfA, fimbrial protein; Provisional	NA|224aa|up_8|CP027107.1_4134863_4135535_+	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|821aa|up_7|CP027107.1_4135666_4138129_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|325aa|up_6|CP027107.1_4138152_4139127_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|170aa|up_5|CP027107.1_4139137_4139647_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	DinG|727aa|up_4|CP027107.1_4139637_4141818_-	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional	NA|282aa|up_3|CP027107.1_4142110_4142956_+	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional	NA|619aa|up_2|CP027107.1_4143063_4144920_+	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component	NA|491aa|up_1|CP027107.1_4144931_4146404_+	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|464aa|up_0|CP027107.1_4146413_4147805_+	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed	NA|468aa|down_0|CP027107.1_4148278_4149682_-	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional	NA|233aa|down_1|CP027107.1_4149907_4150606_+	PRK11552, PRK11552, putative DNA-binding transcriptional regulator; Provisional	NA|334aa|down_2|CP027107.1_4150598_4151600_+	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|577aa|down_3|CP027107.1_4151586_4153317_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|374aa|down_4|CP027107.1_4153313_4154435_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|369aa|down_5|CP027107.1_4154444_4155551_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|139aa|down_6|CP027107.1_4155512_4155929_-	pfam11076, YbhQ, Putative inner membrane protein YbhQ	NA|254aa|down_7|CP027107.1_4156064_4156826_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|414aa|down_8|CP027107.1_4156822_4158064_+	PRK11263, PRK11263, cardiolipin synthase ClsB	NA|343aa|down_9|CP027107.1_4158063_4159092_+	COG0392, COG0392, Predicted integral membrane protein [Function unknown]
GCA_003516125.1_ASM351612v1	CP027107	Cronobacter sakazakii strain CS-931 chromosome, complete genome	21	4164675-4164762	20	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	AGCGCACCCACCACACAGCCCACGGAGC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|74aa|up_7|CP027107.1_4159462_4159684_-,NA|60aa|down_1|CP027107.1_4167150_4167330_+,NA|79aa|down_2|CP027107.1_4167397_4167634_-	NA|414aa|up_9|CP027107.1_4156822_4158064_+	PRK11263, PRK11263, cardiolipin synthase ClsB	NA|343aa|up_8|CP027107.1_4158063_4159092_+	COG0392, COG0392, Predicted integral membrane protein [Function unknown]	NA|74aa|up_7|CP027107.1_4159462_4159684_-	NA	NA|236aa|up_6|CP027107.1_4159792_4160500_-	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|151aa|up_5|CP027107.1_4160594_4161047_-	PRK10678, moaE, molybdopterin synthase catalytic subunit MoaE	NA|82aa|up_4|CP027107.1_4161048_4161294_-	PRK11130, moaD, molybdopterin synthase small subunit; Provisional	NA|162aa|up_3|CP027107.1_4161286_4161772_-	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|171aa|up_2|CP027107.1_4161775_4162288_-	TIGR02667, Molybdenum_cofactor_biosynthesis_protein_B	NA|330aa|up_1|CP027107.1_4162309_4163299_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_0|CP027107.1_4163644_4164553_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|down_0|CP027107.1_4164895_4166917_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|60aa|down_1|CP027107.1_4167150_4167330_+	NA	NA|79aa|down_2|CP027107.1_4167397_4167634_-	NA	NA|236aa|down_3|CP027107.1_4167807_4168515_+	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE	NA|228aa|down_4|CP027107.1_4168511_4169195_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|253aa|down_5|CP027107.1_4169187_4169946_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|384aa|down_6|CP027107.1_4169929_4171081_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|down_7|CP027107.1_4171077_4172118_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|431aa|down_8|CP027107.1_4172199_4173492_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|227aa|down_9|CP027107.1_4173559_4174240_+	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	1	89754-89857	1	CRISPRCasFinder	no	csa3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Type I-A	TGGTGGGTGCGCTGCGCTTACCCACCCTACCATTCACC	38	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|315aa|up_7|CP027108.1_81224_82169_-,NA	NA|289aa|up_9|CP027108.1_80104_80971_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_8|CP027108.1_80972_81185_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|315aa|up_7|CP027108.1_81224_82169_-	NA	NA|500aa|up_6|CP027108.1_82414_83914_+	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component	NA|339aa|up_5|CP027108.1_83978_84995_+	PRK10014, PRK10014, DNA-binding transcriptional repressor MalI; Provisional	NA|462aa|up_4|CP027108.1_85214_86600_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|CP027108.1_86776_87271_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|CP027108.1_87274_87997_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|CP027108.1_88129_88639_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|CP027108.1_88635_89703_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|382aa|down_0|CP027108.1_89931_91077_-	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme	NA|457aa|down_1|CP027108.1_91088_92459_-	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase	NA|378aa|down_2|CP027108.1_92794_93928_+	PRK11784, PRK11784, tRNA 2-selenouridine synthase; Provisional	NA|805aa|down_3|CP027108.1_93917_96332_-	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|229aa|down_4|CP027108.1_96328_97015_-	PRK10584, PRK10584, putative ABC transporter ATP-binding protein YbbA; Provisional	NA|220aa|down_5|CP027108.1_96952_97612_+	PRK10528, PRK10528, multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional	NA|257aa|down_6|CP027108.1_97640_98411_+	PRK08017, PRK08017, SDR family oxidoreductase	NA|285aa|down_7|CP027108.1_98469_99324_+	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]	NA|306aa|down_8|CP027108.1_99433_100351_+	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]	NA|152aa|down_9|CP027108.1_100347_100803_+	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	2	158346-159289	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Type I-E	CGGTTTATCCCCGCTCGCGCGGGGAACAC,CGGTTTATCCCCGCTCGCGCGGGGAA,CGGTTTATCCCCGCTCGCGCGGGGAA	29,26,26	0	0	NA	NA	I-E:I-E:I-E	15,15,14	15	TypeI-E	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|74aa|up_2|CP027108.1_156064_156286_-,NA|84aa|up_1|CP027108.1_156282_156534_-,NA	NA|268aa|up_9|CP027108.1_148718_149522_+	cd13597, PBP2_lipoprotein_Tp32, The substrate-binding domain of the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum binds L-methionine; the type 2 periplasmic-binding protein fold	NA|264aa|up_8|CP027108.1_149518_150310_+	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|224aa|up_7|CP027108.1_150294_150966_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|519aa|up_6|CP027108.1_151130_152687_+	COG4943, COG4943, Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms]	NA|276aa|up_5|CP027108.1_152679_153507_-	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|206aa|up_4|CP027108.1_153563_154181_-	COG2364, COG2364, Predicted membrane protein [Function unknown]	NA|474aa|up_3|CP027108.1_154267_155689_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|74aa|up_2|CP027108.1_156064_156286_-	NA	NA|84aa|up_1|CP027108.1_156282_156534_-	NA	NA|153aa|up_0|CP027108.1_157256_157715_-	pfam12883, DUF3828, Protein of unknown function (DUF3828)	cas2|98aa|down_0|CP027108.1_159385_159679_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|down_1|CP027108.1_159678_160596_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|CP027108.1_160592_161243_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|251aa|down_3|CP027108.1_161224_161977_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|358aa|down_4|CP027108.1_161986_163060_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|202aa|down_5|CP027108.1_163071_163677_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|523aa|down_6|CP027108.1_163677_165246_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|878aa|down_7|CP027108.1_165598_168232_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|104aa|down_8|CP027108.1_168437_168749_+	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|191aa|down_9|CP027108.1_168780_169353_-	COG3126, COG3126, Uncharacterized protein conserved in bacteria [Function unknown]
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	3	185457-186218	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Unclear	CGGTTTATCCCCGCTCGCGCGGGGAACGG,CGGTTTATCCCCGCTCGCGCGGGGAACGG,CCGT---TCCCCGCGCGAGCGGGGATAAACC	29,29,31	0	0	NA	NA	I-E:I-E:I-E	12,12,12	12	Unclear	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|146aa|up_5|CP027108.1_178110_178548_+,NA|185aa|up_4|CP027108.1_180494_181049_+,NA	NA|593aa|up_9|CP027108.1_172488_174267_-	PRK10790, PRK10790, SmdB family multidrug efflux ABC transporter permease/ATP-binding protein	NA|592aa|up_8|CP027108.1_174259_176035_-	PRK10789, PRK10789, SmdA family multidrug ABC transporter permease/ATP-binding protein	NA|154aa|up_7|CP027108.1_176092_176554_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|349aa|up_6|CP027108.1_176669_177716_+	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism]	NA|146aa|up_5|CP027108.1_178110_178548_+	NA	NA|185aa|up_4|CP027108.1_180494_181049_+	NA	NA|273aa|up_3|CP027108.1_181088_181907_-	PRK15126, PRK15126, HMP-PP phosphatase	NA|577aa|up_2|CP027108.1_181998_183729_+	COG4533, COG4533, ABC-type uncharacterized transport system, periplasmic component [General function prediction only]	NA|232aa|up_1|CP027108.1_183758_184454_+	PRK11106, PRK11106, queuosine biosynthesis protein QueC; Provisional	NA|279aa|up_0|CP027108.1_184446_185283_-	cd07742, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|133aa|down_0|CP027108.1_186432_186831_-	TIGR00051, Acyl-CoA_thioesterase_YbgC, acyl-CoA thioester hydrolase, YbgC/YbaW family	NA|123aa|down_1|CP027108.1_186954_187323_-	TIGR00426, Hypothetical_protein_ybaV_precursor	NA|626aa|down_2|CP027108.1_187469_189347_-	PRK10788, PRK10788, periplasmic folding chaperone; Provisional	NA|91aa|down_3|CP027108.1_189562_189835_-	cd13831, HU, histone-like DNA-binding protein HU	NA|785aa|down_4|CP027108.1_190044_192399_-	PRK10787, PRK10787, DNA-binding ATP-dependent protease La; Provisional	NA|425aa|down_5|CP027108.1_192585_193860_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|208aa|down_6|CP027108.1_193983_194607_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|433aa|down_7|CP027108.1_194907_196206_-	PRK01490, tig, trigger factor; Provisional	NA|106aa|down_8|CP027108.1_196556_196874_-	PRK11628, PRK11628, transcriptional regulator BolA; Provisional	NA|193aa|down_9|CP027108.1_197172_197751_+	PRK11627, PRK11627, hypothetical protein; Provisional
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	4	402691-402812	4	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	AGTCAAACTCCAGTTCCACCTGCTCCGAACC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA	NA|141aa|up_9|CP027108.1_393714_394137_-	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|182aa|up_8|CP027108.1_394133_394679_-	pfam07152, YaeQ, YaeQ protein	NA|67aa|up_7|CP027108.1_394885_395086_+	PRK04964, PRK04964, hypothetical protein; Provisional	NA|87aa|up_6|CP027108.1_395072_395333_+	PRK11625, PRK11625, Rho-binding antiterminator; Provisional	NA|105aa|up_5|CP027108.1_395380_395695_-	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|435aa|up_4|CP027108.1_395687_396992_-	PRK10660, tilS, tRNA(Ile)-lysidine synthetase; Provisional	NA|130aa|up_3|CP027108.1_397056_397446_-	PRK11478, PRK11478, VOC family protein	NA|713aa|up_2|CP027108.1_397503_399642_-	PRK15399, PRK15399, lysine decarboxylase	NA|588aa|up_1|CP027108.1_399789_401553_-	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain	NA|320aa|up_0|CP027108.1_401716_402676_-	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|199aa|down_0|CP027108.1_406291_406888_-	PRK00015, rnhB, ribonuclease HII; Validated	NA|381aa|down_1|CP027108.1_406884_408027_-	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed	NA|263aa|down_2|CP027108.1_408026_408815_-	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA|152aa|down_3|CP027108.1_408818_409274_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|342aa|down_4|CP027108.1_409390_410416_-	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional	NA|165aa|down_5|CP027108.1_410419_410914_-	PRK10780, PRK10780, molecular chaperone Skp	NA|805aa|down_6|CP027108.1_411036_413451_-	PRK11067, PRK11067, outer membrane protein assembly factor YaeT; Provisional	NA|451aa|down_7|CP027108.1_413481_414834_-	PRK10779, PRK10779, sigma E protease regulator RseP	NA|286aa|down_8|CP027108.1_414845_415703_-	PRK11624, cdsA, phosphatidate cytidylyltransferase	NA|253aa|down_9|CP027108.1_415715_416474_-	PRK10240, PRK10240, (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	5	462940-463207	5,3,3	CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	4,4,3	4	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA|127aa|down_4|CP027108.1_466293_466674_+	NA|265aa|up_9|CP027108.1_451721_452516_+	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|285aa|up_8|CP027108.1_452528_453383_+	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed	NA|127aa|up_7|CP027108.1_453480_453861_+	PRK05449, PRK05449, aspartate alpha-decarboxylase; Provisional	NA|416aa|up_6|CP027108.1_453905_455153_-	cd10966, CE4_yadE_5s, Putative catalytic polysaccharide deacetylase domain of uncharacterized protein yadE and similar proteins	NA|257aa|up_5|CP027108.1_455317_456088_-	PRK15066, PRK15066, inner membrane transport permease; Provisional	NA|309aa|up_4|CP027108.1_456084_457011_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|221aa|up_3|CP027108.1_457119_457782_+	PRK10437, PRK10437, carbonic anhydrase; Provisional	NA|179aa|up_2|CP027108.1_457836_458373_-	PRK15423, PRK15423, hypoxanthine phosphoribosyltransferase; Provisional	NA|799aa|up_1|CP027108.1_458565_460962_+	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|521aa|up_0|CP027108.1_461291_462854_-	PRK10965, PRK10965, multicopper oxidase; Provisional	NA|116aa|down_0|CP027108.1_463584_463932_+	pfam09691, T2SS_PulS_OutS, Type II secretion system pilotin lipoprotein (PulS_OutS)	NA|284aa|down_1|CP027108.1_464055_464907_+	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|265aa|down_2|CP027108.1_464921_465716_+	PRK05462, PRK05462, adenosylmethionine decarboxylase	NA|122aa|down_3|CP027108.1_465744_466110_-	PRK05248, PRK05248, hypothetical protein; Provisional	NA|127aa|down_4|CP027108.1_466293_466674_+	NA	NA|866aa|down_5|CP027108.1_466760_469358_-	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|495aa|down_6|CP027108.1_470264_471749_+	pfam11737, DUF3300, Protein of unknown function (DUF3300)	NA|265aa|down_7|CP027108.1_471762_472557_+	pfam11453, DUF2950, Protein of unknown function (DUF2950)	NA|244aa|down_8|CP027108.1_472612_473344_-	PRK13731, PRK13731, complement resistance protein TraT	NA|475aa|down_9|CP027108.1_473658_475083_-	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	6	723961-724037	6	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GCATGTCCTCCGTAGGGCGGGTAAGC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA|156aa|down_2|CP027108.1_727959_728427_-,NA|30aa|down_5|CP027108.1_730662_730752_+	NA|84aa|up_9|CP027108.1_706779_707031_+	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding	NA|362aa|up_8|CP027108.1_707162_708248_+	pfam14072, DndB, DNA-sulfur modification-associated	NA|545aa|up_7|CP027108.1_708244_709879_+	PRK06850, PRK06850, hypothetical protein; Provisional	NA|667aa|up_6|CP027108.1_709868_711869_+	TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD	NA|118aa|up_5|CP027108.1_711868_712222_+	pfam08870, DndE, DNA sulphur modification protein DndE	NA|597aa|up_4|CP027108.1_712265_714056_-	pfam03235, DUF262, Protein of unknown function DUF262	NA|1691aa|up_3|CP027108.1_714073_719146_-	TIGR03237, dnd_assoc_2, DNA phosphorothioation-dependent restriction protein DptH	NA|441aa|up_2|CP027108.1_719126_720449_-	TIGR03236, dnd_assoc_1, DNA phosphorothioation-dependent restriction protein DptG	NA|550aa|up_1|CP027108.1_720453_722103_-	TIGR03238, dnd_assoc_3, DNA phosphorothioation-dependent restriction protein DptF	NA|340aa|up_0|CP027108.1_722749_723769_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|555aa|down_0|CP027108.1_724076_725741_-	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ	NA|548aa|down_1|CP027108.1_726255_727899_-	TIGR02361, Dihydroxyacetone_kinase_1, dihydroxyacetone kinase, ATP-dependent	NA|156aa|down_2|CP027108.1_727959_728427_-	NA	NA|361aa|down_3|CP027108.1_728491_729574_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|371aa|down_4|CP027108.1_729560_730673_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|30aa|down_5|CP027108.1_730662_730752_+	NA	NA|504aa|down_6|CP027108.1_730942_732454_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|154aa|down_7|CP027108.1_732714_733176_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_8|CP027108.1_733178_736034_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|401aa|down_9|CP027108.1_736150_737353_-	COG4269, COG4269, Predicted membrane protein [Function unknown]
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	7	732475-732566	7	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GCGCTTCGCTTACCCACCCTACCAAACA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|156aa|up_4|CP027108.1_727959_728427_-,NA|30aa|up_1|CP027108.1_730662_730752_+,NA|269aa|down_4|CP027108.1_738097_738904_-	NA|441aa|up_9|CP027108.1_719126_720449_-	TIGR03236, dnd_assoc_1, DNA phosphorothioation-dependent restriction protein DptG	NA|550aa|up_8|CP027108.1_720453_722103_-	TIGR03238, dnd_assoc_3, DNA phosphorothioation-dependent restriction protein DptF	NA|340aa|up_7|CP027108.1_722749_723769_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|555aa|up_6|CP027108.1_724076_725741_-	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ	NA|548aa|up_5|CP027108.1_726255_727899_-	TIGR02361, Dihydroxyacetone_kinase_1, dihydroxyacetone kinase, ATP-dependent	NA|156aa|up_4|CP027108.1_727959_728427_-	NA	NA|361aa|up_3|CP027108.1_728491_729574_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|371aa|up_2|CP027108.1_729560_730673_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|30aa|up_1|CP027108.1_730662_730752_+	NA	NA|504aa|up_0|CP027108.1_730942_732454_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|154aa|down_0|CP027108.1_732714_733176_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|CP027108.1_733178_736034_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|401aa|down_2|CP027108.1_736150_737353_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|CP027108.1_737547_738051_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|269aa|down_4|CP027108.1_738097_738904_-	NA	NA|255aa|down_5|CP027108.1_738948_739713_-	pfam06175, MiaE, tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)	NA|140aa|down_6|CP027108.1_739760_740180_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_7|CP027108.1_740343_741348_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_8|CP027108.1_741682_742135_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|407aa|down_9|CP027108.1_742806_744027_+	PRK01388, PRK01388, arginine deiminase; Provisional
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	8	741380-741618	4	PILER-CR	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	ATGGTGGGTGCGCTTCGCTTACCCACCCTACAAAACAACGCTCACCGTAGGGCGGGTAAGC	61	0	0	NA	NA	NA	2	2	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|30aa|up_9|CP027108.1_730662_730752_+,NA|269aa|up_3|CP027108.1_738097_738904_-,NA	NA|30aa|up_9|CP027108.1_730662_730752_+	NA	NA|504aa|up_8|CP027108.1_730942_732454_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|154aa|up_7|CP027108.1_732714_733176_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|up_6|CP027108.1_733178_736034_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|401aa|up_5|CP027108.1_736150_737353_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|up_4|CP027108.1_737547_738051_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|269aa|up_3|CP027108.1_738097_738904_-	NA	NA|255aa|up_2|CP027108.1_738948_739713_-	pfam06175, MiaE, tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)	NA|140aa|up_1|CP027108.1_739760_740180_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|up_0|CP027108.1_740343_741348_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_0|CP027108.1_741682_742135_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|407aa|down_1|CP027108.1_742806_744027_+	PRK01388, PRK01388, arginine deiminase; Provisional	NA|304aa|down_2|CP027108.1_744037_744949_+	PRK12354, PRK12354, carbamate kinase; Reviewed	NA|335aa|down_3|CP027108.1_744985_745990_+	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated	NA|468aa|down_4|CP027108.1_746038_747442_+	COG1288, COG1288, Predicted membrane protein [Function unknown]	NA|160aa|down_5|CP027108.1_747610_748090_+	COG1438, ArgR, Arginine repressor [Transcription]	NA|312aa|down_6|CP027108.1_748343_749279_+	COG0540, PyrB, Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism]	NA|154aa|down_7|CP027108.1_749289_749751_+	PRK00893, PRK00893, aspartate carbamoyltransferase regulatory subunit; Reviewed	NA|129aa|down_8|CP027108.1_749824_750211_+	PRK11401, PRK11401, enamine/imine deaminase	NA|718aa|down_9|CP027108.1_750263_752417_-	PRK01254, PRK01254, YgiQ family radical SAM protein
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	9	1126595-1126667	8	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GCGCTTCGCTTACCCGCCCTACG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA	NA|226aa|up_9|CP027108.1_1116593_1117271_-	PRK11536, PRK11536, 6-N-hydroxylaminopurine resistance protein; Provisional	NA|207aa|up_8|CP027108.1_1117341_1117962_-	PRK10925, PRK10925, superoxide dismutase [Mn]	NA|346aa|up_7|CP027108.1_1118334_1119372_+	pfam06379, RhaT, L-rhamnose-proton symport protein (RhaT)	NA|284aa|up_6|CP027108.1_1119368_1120220_-	PRK13501, PRK13501, HTH-type transcriptional activator RhaR	NA|279aa|up_5|CP027108.1_1120291_1121128_-	PRK13503, PRK13503, HTH-type transcriptional activator RhaS	NA|491aa|up_4|CP027108.1_1121429_1122902_+	PRK10640, rhaB, rhamnulokinase; Provisional	NA|419aa|up_3|CP027108.1_1122898_1124155_+	PRK01076, PRK01076, L-rhamnose isomerase; Provisional	NA|275aa|up_2|CP027108.1_1124164_1124989_+	PRK03634, PRK03634, rhamnulose-1-phosphate aldolase; Provisional	NA|383aa|up_1|CP027108.1_1125109_1126258_+	cd08188, PDDH, 1,3-Propanediol (1,3-PD) dehydrogenase	NA|105aa|up_0|CP027108.1_1126254_1126569_+	TIGR02625, L-rhamnose_mutarotase, L-rhamnose mutarotase	NA|421aa|down_0|CP027108.1_1126751_1128014_-	PRK09528, lacY, galactoside permease; Reviewed	NA|708aa|down_1|CP027108.1_1128071_1130195_-	COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism]	NA|336aa|down_2|CP027108.1_1130312_1131320_-	cd20010, PBP1_AglR-like, Ligand-binding domain of DNA transcription repressor specific for alpha-glucosides (AglR) and similar proteins	NA|183aa|down_3|CP027108.1_1131395_1131944_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|220aa|down_4|CP027108.1_1132049_1132709_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|108aa|down_5|CP027108.1_1132708_1133032_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|70aa|down_6|CP027108.1_1133070_1133280_-	pfam07338, DUF1471, Protein of unknown function (DUF1471)	NA|281aa|down_7|CP027108.1_1133410_1134253_-	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD	NA|196aa|down_8|CP027108.1_1134418_1135006_+	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit	NA|805aa|down_9|CP027108.1_1135054_1137469_+	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	10	1472060-1472181	9	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GGTGGATGCGCTGCGCTTATCCACCCTACGAA	32	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA	NA|210aa|up_9|CP027108.1_1459287_1459917_+	COG5571, COG5571, Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion [Cell motility and secretion]	NA|401aa|up_8|CP027108.1_1460073_1461276_+	TIGR00890, Uncharacterized_MFS-type_transporter_YhjX, oxalate/formate antiporter family transporter	NA|144aa|up_7|CP027108.1_1461394_1461826_+	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|560aa|up_6|CP027108.1_1462039_1463719_+	PRK11560, PRK11560, kdo(2)-lipid A phosphoethanolamine 7''-transferase	NA|153aa|up_5|CP027108.1_1464115_1464574_-	pfam07007, LprI, Lysozyme inhibitor LprI	NA|536aa|up_4|CP027108.1_1466249_1467857_+	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|340aa|up_3|CP027108.1_1468052_1469072_+	PRK10914, PRK10914, dipeptide ABC transporter permease DppB	NA|301aa|up_2|CP027108.1_1469081_1469984_+	PRK10913, PRK10913, dipeptide ABC transporter permease DppC	NA|332aa|up_1|CP027108.1_1469995_1470991_+	PRK11022, dppD, dipeptide transporter ATP-binding subunit; Provisional	NA|338aa|up_0|CP027108.1_1470977_1471991_+	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional	NA|562aa|down_0|CP027108.1_1472202_1473888_-	pfam11658, CBP_BcsG, Cellulose biosynthesis protein BcsG	NA|66aa|down_1|CP027108.1_1473880_1474078_-	pfam11120, CBP_BcsF, Cellulose biosynthesis protein BcsF	NA|525aa|down_2|CP027108.1_1474074_1475649_-	pfam10995, CBP_GIL, GGDEF I-site like or GIL domain	NA|68aa|down_3|CP027108.1_1475817_1476021_+	pfam10945, CBP_BcsR, Cellulose biosynthesis protein BcsR	NA|232aa|down_4|CP027108.1_1476017_1476713_+	pfam06564, CBP_BcsQ, Cellulose biosynthesis protein BcsQ	NA|873aa|down_5|CP027108.1_1476742_1479361_+	PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional	NA|811aa|down_6|CP027108.1_1479371_1481804_+	PRK11114, PRK11114, cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA|372aa|down_7|CP027108.1_1481810_1482926_+	PRK11097, PRK11097, cellulase	NA|1168aa|down_8|CP027108.1_1482907_1486411_+	PRK11447, PRK11447, cellulose synthase subunit BcsC; Provisional	NA|642aa|down_9|CP027108.1_1486567_1488493_+	PRK13561, PRK13561, putative diguanylate cyclase; Provisional
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	11	1592463-1592544	10	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GGGTGCGCTGCGCTTACCCACCCTAC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA|66aa|down_5|CP027108.1_1599859_1600057_-	NA|801aa|up_9|CP027108.1_1581556_1583959_+	PRK14985, PRK14985, maltodextrin phosphorylase; Provisional	NA|703aa|up_8|CP027108.1_1583969_1586078_+	PRK11052, malQ, 4-alpha-glucanotransferase; Provisional	NA|71aa|up_7|CP027108.1_1586347_1586560_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|192aa|up_6|CP027108.1_1586719_1587295_-	PRK11190, PRK11190, iron-sulfur cluster biogenesis protein NfuA	NA|226aa|up_5|CP027108.1_1587353_1588031_-	PRK11595, PRK11595, DNA utilization protein GntX; Provisional	NA|260aa|up_4|CP027108.1_1588070_1588850_+	PRK10349, PRK10349, pimeloyl-ACP methyl ester esterase BioH	NA|90aa|up_3|CP027108.1_1588931_1589201_+	PRK09929, PRK09929, hypothetical protein; Provisional	NA|79aa|up_2|CP027108.1_1589246_1589483_-	PRK15431, PRK15431, [Fe-S]-dependent transcriptional repressor FeoC	NA|772aa|up_1|CP027108.1_1589482_1591798_-	PRK09554, feoB, Fe(2+) transporter permease subunit FeoB	NA|75aa|up_0|CP027108.1_1591824_1592049_-	PRK09555, feoA, ferrous iron transporter A	NA|776aa|down_0|CP027108.1_1592662_1594990_-	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|158aa|down_1|CP027108.1_1595102_1595576_-	PRK01885, greB, transcription elongation factor GreB; Reviewed	NA|240aa|down_2|CP027108.1_1595917_1596637_+	PRK09468, ompR, osmolarity response regulator; Provisional	NA|449aa|down_3|CP027108.1_1596633_1597980_+	PRK09467, envZ, osmolarity sensor protein; Provisional	NA|540aa|down_4|CP027108.1_1598040_1599660_-	TIGR00224, Phosphoenolpyruvate_carboxykinase, phosphoenolpyruvate carboxykinase (ATP)	NA|66aa|down_5|CP027108.1_1599859_1600057_-	NA	NA|563aa|down_6|CP027108.1_1600088_1601777_+	pfam13687, DUF4153, Domain of unknown function (DUF4153)	NA|293aa|down_7|CP027108.1_1601825_1602704_-	PRK00114, hslO, Hsp33 family molecular chaperone HslO	NA|134aa|down_8|CP027108.1_1602727_1603129_-	PRK10348, PRK10348, ribosome-associated heat shock protein Hsp15; Provisional	NA|227aa|down_9|CP027108.1_1603128_1603809_-	PRK14988, PRK14988, GMP/IMP nucleotidase; Provisional
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	12	2048655-2048758	11	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GTAGGGTGGGTAAGCGCAGCGCACCCACCGG	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|63aa|up_5|CP027108.1_2042926_2043115_-,NA|66aa|up_2|CP027108.1_2044668_2044866_-,NA	NA|195aa|up_9|CP027108.1_2038437_2039022_+	PRK01736, PRK01736, hypothetical protein; Reviewed	NA|439aa|up_8|CP027108.1_2039045_2040362_+	PRK10879, PRK10879, proline aminopeptidase P II; Provisional	NA|393aa|up_7|CP027108.1_2040358_2041537_+	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated	NA|401aa|up_6|CP027108.1_2041547_2042750_+	PRK08013, PRK08013, oxidoreductase; Provisional	NA|63aa|up_5|CP027108.1_2042926_2043115_-	NA	NA|366aa|up_4|CP027108.1_2043172_2044270_+	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|130aa|up_3|CP027108.1_2044293_2044683_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|66aa|up_2|CP027108.1_2044668_2044866_-	NA	NA|958aa|up_1|CP027108.1_2044812_2047686_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|248aa|up_0|CP027108.1_2047853_2048597_+	PRK09730, PRK09730, SDR family oxidoreductase	NA|478aa|down_0|CP027108.1_2048811_2050245_-	PRK15014, PRK15014, 6-phospho-beta-glucosidase BglA; Provisional	NA|243aa|down_1|CP027108.1_2050396_2051125_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|105aa|down_2|CP027108.1_2051300_2051615_+	PRK04980, PRK04980, hypothetical protein; Provisional	NA|218aa|down_3|CP027108.1_2051757_2052411_+	PRK15087, PRK15087, hemolysin; Provisional	NA|330aa|down_4|CP027108.1_2052515_2053505_-	PRK09559, PRK09559, putative global regulator; Reviewed	NA|89aa|down_5|CP027108.1_2053782_2054049_+	PRK10878, PRK10878, FAD assembly factor SdhE	NA|139aa|down_6|CP027108.1_2054029_2054446_+	pfam07254, Cpta_toxin, Membrane-bound toxin component of toxin-antitoxin system	NA|174aa|down_7|CP027108.1_2054459_2054981_-	PRK12359, PRK12359, flavodoxin FldB; Provisional	NA|299aa|down_8|CP027108.1_2055082_2055979_+	PRK00283, xerD, tyrosine recombinase	NA|240aa|down_9|CP027108.1_2056001_2056721_+	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	13	2420392-2420525	12	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	TTCGTGGTTTTGTAGGGTGGGTAAGCGAAGCGCACCCACC	40	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|123aa|up_4|CP027108.1_2413753_2414122_+,NA	NA|1039aa|up_9|CP027108.1_2406669_2409786_-	PRK10555, PRK10555, multidrug efflux RND transporter permease AcrD	NA|215aa|up_8|CP027108.1_2409920_2410565_-	PRK10403, PRK10403, nitrate/nitrite response regulator protein NarP	NA|192aa|up_7|CP027108.1_2410761_2411337_+	PRK15009, PRK15009, GDP-mannose pyrophosphatase NudK; Provisional	NA|348aa|up_6|CP027108.1_2411466_2412510_+	pfam06674, DUF1176, Protein of unknown function (DUF1176)	NA|316aa|up_5|CP027108.1_2412585_2413533_+	COG0026, PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]	NA|123aa|up_4|CP027108.1_2413753_2414122_+	NA	NA|166aa|up_3|CP027108.1_2414121_2414619_+	pfam12883, DUF3828, Protein of unknown function (DUF3828)	NA|665aa|up_2|CP027108.1_2414812_2416807_-	PRK12753, PRK12753, transketolase; Reviewed	NA|317aa|up_1|CP027108.1_2416827_2417778_-	PRK12346, PRK12346, transaldolase A; Provisional	NA|760aa|up_0|CP027108.1_2418059_2420339_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|262aa|down_0|CP027108.1_2420558_2421344_-	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein	NA|331aa|down_1|CP027108.1_2421346_2422339_-	PRK10440, PRK10440, iron-enterobactin ABC transporter permease	NA|336aa|down_2|CP027108.1_2422335_2423343_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|415aa|down_3|CP027108.1_2423450_2424695_+	PRK10489, PRK10489, enterobactin transporter EntS	NA|320aa|down_4|CP027108.1_2424720_2425680_-	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional	NA|389aa|down_5|CP027108.1_2425866_2427033_+	PRK15016, PRK15016, isochorismate synthase EntC; Provisional	NA|535aa|down_6|CP027108.1_2427043_2428648_+	PRK10946, entE, (2,3-dihydroxybenzoyl)adenylate synthase	NA|290aa|down_7|CP027108.1_2428657_2429527_+	COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|251aa|down_8|CP027108.1_2429523_2430276_+	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	NA|138aa|down_9|CP027108.1_2430276_2430690_+	PRK10254, PRK10254, proofreading thioesterase EntH
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	14	2627560-2627649	13	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GCTTCGCTTACCCACCCTACGGCC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA|64aa|down_1|CP027108.1_2630082_2630274_-	NA|144aa|up_9|CP027108.1_2617646_2618078_-	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|327aa|up_8|CP027108.1_2618092_2619073_-	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown]	NA|227aa|up_7|CP027108.1_2619206_2619887_+	PRK15479, PRK15479, transcriptional regulator TctD	NA|479aa|up_6|CP027108.1_2619867_2621304_+	pfam08521, 2CSK_N, Two-component sensor kinase N-terminal	NA|181aa|up_5|CP027108.1_2621445_2621988_+	pfam07437, YfaZ, YfaZ precursor	NA|399aa|up_4|CP027108.1_2622081_2623278_+	PRK03673, PRK03673, nicotinamide mononucleotide deamidase-related protein YfaY	NA|451aa|up_3|CP027108.1_2623614_2624967_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|353aa|up_2|CP027108.1_2624976_2626035_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|85aa|up_1|CP027108.1_2626125_2626380_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|CP027108.1_2626381_2627512_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|CP027108.1_2627685_2629971_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|64aa|down_1|CP027108.1_2630082_2630274_-	NA	NA|244aa|down_2|CP027108.1_2630323_2631055_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|879aa|down_3|CP027108.1_2631214_2633851_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|950aa|down_4|CP027108.1_2634036_2636886_+	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC	NA|217aa|down_5|CP027108.1_2637056_2637707_-	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional	NA|885aa|down_6|CP027108.1_2637723_2640378_-	PRK10618, PRK10618, phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional	NA|380aa|down_7|CP027108.1_2641214_2642354_+	PRK10554, PRK10554, outer membrane porin protein C; Provisional	NA|344aa|down_8|CP027108.1_2642450_2643482_+	PRK10461, PRK10461, thiamine biosynthesis lipoprotein ApbE; Provisional	NA|355aa|down_9|CP027108.1_2643554_2644619_+	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	15	2750625-2750702	14	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	CGCTTACCCGCCCTACGAAAACC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|191aa|up_6|CP027108.1_2743719_2744292_+,NA|61aa|up_5|CP027108.1_2744339_2744522_+,NA|43aa|down_9|CP027108.1_2764165_2764294_-	NA|575aa|up_9|CP027108.1_2740619_2742344_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|133aa|up_8|CP027108.1_2742703_2743102_-	COG5455, COG5455, Predicted integral membrane protein [Function unknown]	NA|106aa|up_7|CP027108.1_2743261_2743579_+	pfam07377, DUF1493, Protein of unknown function (DUF1493)	NA|191aa|up_6|CP027108.1_2743719_2744292_+	NA	NA|61aa|up_5|CP027108.1_2744339_2744522_+	NA	NA|266aa|up_4|CP027108.1_2744731_2745529_+	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated	NA|267aa|up_3|CP027108.1_2745515_2746316_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|351aa|up_2|CP027108.1_2746463_2747516_+	PRK09250, PRK09250, class I fructose-bisphosphate aldolase	NA|300aa|up_1|CP027108.1_2747960_2748860_-	PRK13054, PRK13054, lipid kinase; Reviewed	NA|454aa|up_0|CP027108.1_2749110_2750472_-	PRK15452, PRK15452, putative protease; Provisional	NA|241aa|down_0|CP027108.1_2750957_2751680_-	PRK10710, PRK10710, DNA-binding transcriptional regulator BaeR; Provisional	NA|475aa|down_1|CP027108.1_2751676_2753101_-	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS	NA|472aa|down_2|CP027108.1_2753097_2754513_-	PRK10504, PRK10504, putative transporter; Provisional	NA|1030aa|down_3|CP027108.1_2754516_2757606_-	PRK10614, PRK10614, multidrug efflux system subunit MdtC; Provisional	NA|1041aa|down_4|CP027108.1_2757606_2760729_-	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA|416aa|down_5|CP027108.1_2760728_2761976_-	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|121aa|down_6|CP027108.1_2762206_2762569_+	COG4683, COG4683, Uncharacterized protein conserved in bacteria [Function unknown]	NA|99aa|down_7|CP027108.1_2762555_2762852_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|451aa|down_8|CP027108.1_2762861_2764214_-	PRK11678, PRK11678, putative chaperone; Provisional	NA|43aa|down_9|CP027108.1_2764165_2764294_-	NA
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	16	3122282-3122359	15	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GGTGGGTAAGCGCAGCGCACCCACC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA	NA|132aa|up_9|CP027108.1_3113234_3113630_+	PRK10278, PRK10278, SirB family protein	NA|270aa|up_8|CP027108.1_3113626_3114436_+	PRK10941, PRK10941, tetratricopeptide repeat-containing protein	NA|285aa|up_7|CP027108.1_3114476_3115331_+	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional	NA|368aa|up_6|CP027108.1_3115575_3116679_-	PRK10599, PRK10599, sodium-potassium/proton antiporter ChaA	NA|77aa|up_5|CP027108.1_3116953_3117184_+	PRK09582, chaB, putative cation transport regulator ChaB	NA|233aa|up_4|CP027108.1_3117401_3118100_+	COG3703, ChaC, Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism]	NA|82aa|up_3|CP027108.1_3118130_3118376_-	pfam08980, DUF1883, Domain of unknown function (DUF1883)	NA|596aa|up_2|CP027108.1_3118585_3120373_-	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|118aa|up_1|CP027108.1_3120520_3120874_-	COG1553, DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]	NA|401aa|up_0|CP027108.1_3120945_3122148_+	pfam08376, NIT, Nitrate and nitrite sensing	NA|417aa|down_0|CP027108.1_3122828_3124079_+	pfam13379, NMT1_2, NMT1-like family	NA|294aa|down_1|CP027108.1_3124088_3124970_+	TIGR01183, Nitrate_transport_permease_protein_NrtB, nitrate ABC transporter, permease protein	NA|263aa|down_2|CP027108.1_3124979_3125768_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|1356aa|down_3|CP027108.1_3125777_3129845_+	PRK14989, PRK14989, nitrite reductase subunit NirD; Provisional	NA|901aa|down_4|CP027108.1_3129841_3132544_+	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite	NA|184aa|down_5|CP027108.1_3132439_3132991_-	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|472aa|down_6|CP027108.1_3133169_3134585_+	PRK10177, PRK10177, YchO/YchP family invasin	NA|217aa|down_7|CP027108.1_3134581_3135232_-	PRK10651, PRK10651, transcriptional regulator NarL; Provisional	NA|603aa|down_8|CP027108.1_3135224_3137033_-	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX	NA|464aa|down_9|CP027108.1_3137345_3138737_+	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	17	3353309-3353383	16	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GCCCTACAAAACGCCACCCTTATCG	25	1	1	3353334-3353358	CP027107.1_3353352-3353376	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|298aa|up_9|CP027108.1_3343136_3344030_-,NA|74aa|up_0|CP027108.1_3352990_3353212_+,NA|63aa|down_4|CP027108.1_3361309_3361498_-	NA|298aa|up_9|CP027108.1_3343136_3344030_-	NA	NA|229aa|up_8|CP027108.1_3344069_3344756_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|249aa|up_7|CP027108.1_3344844_3345591_-	PRK10538, PRK10538, bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA|682aa|up_6|CP027108.1_3345750_3347796_+	PRK10280, PRK10280, peptidyl-dipeptidase Dcp	NA|268aa|up_5|CP027108.1_3348118_3348922_-	PRK15043, PRK15043, HTH-type transcriptional regulator MlrA	NA|304aa|up_4|CP027108.1_3349085_3349997_-	COG3781, COG3781, Predicted membrane protein [Function unknown]	NA|57aa|up_3|CP027108.1_3350555_3350726_+	COG3729, GsiB, General stress protein [General function prediction only]	NA|258aa|up_2|CP027108.1_3350839_3351613_+	pfam06884, DUF1264, Protein of unknown function (DUF1264)	NA|368aa|up_1|CP027108.1_3351822_3352926_+	PRK06520, PRK06520, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	NA|74aa|up_0|CP027108.1_3352990_3353212_+	NA	NA|605aa|down_0|CP027108.1_3353694_3355509_+	PRK08186, PRK08186, allophanate hydrolase; Provisional	NA|1203aa|down_1|CP027108.1_3355519_3359128_+	TIGR02712, Includes:_Allophanate_hydrolase, urea carboxylase	NA|234aa|down_2|CP027108.1_3359304_3360006_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|424aa|down_3|CP027108.1_3360041_3361313_+	pfam13433, Peripla_BP_5, Periplasmic binding protein domain	NA|63aa|down_4|CP027108.1_3361309_3361498_-	NA	NA|522aa|down_5|CP027108.1_3361496_3363062_+	TIGR03409, urea_trans_UrtB, urea ABC transporter, permease protein UrtB	NA|358aa|down_6|CP027108.1_3363058_3364132_+	TIGR03408, urea_trans_UrtC, urea ABC transporter, permease protein UrtC	NA|266aa|down_7|CP027108.1_3364131_3364929_+	TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD	NA|233aa|down_8|CP027108.1_3364938_3365637_+	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE	NA|105aa|down_9|CP027108.1_3365813_3366128_+	pfam07377, DUF1493, Protein of unknown function (DUF1493)
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	19	3896117-3896196	18	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	GGTGGGTAAGCGTCAGCGCACCCACCA	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA|67aa|down_1|CP027108.1_3899332_3899533_+,NA|75aa|down_9|CP027108.1_3907909_3908134_+	NA|181aa|up_9|CP027108.1_3886116_3886659_-	PRK00431, PRK00431, ADP-ribose-binding protein	NA|101aa|up_8|CP027108.1_3886731_3887034_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|159aa|up_7|CP027108.1_3887228_3887705_-	pfam06496, DUF1097, Protein of unknown function (DUF1097)	NA|189aa|up_6|CP027108.1_3887815_3888382_-	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only]	NA|246aa|up_5|CP027108.1_3888406_3889144_-	PRK09248, PRK09248, putative hydrolase; Validated	NA|314aa|up_4|CP027108.1_3889216_3890158_-	PRK15469, ghrA, glyoxylate/hydroxypyruvate reductase GhrA	NA|347aa|up_3|CP027108.1_3890243_3891284_-	PRK15206, PRK15206, long polar fimbrial protein LpfD; Provisional	NA|849aa|up_2|CP027108.1_3891300_3893847_-	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|230aa|up_1|CP027108.1_3893870_3894560_-	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|178aa|up_0|CP027108.1_3894639_3895173_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|775aa|down_0|CP027108.1_3896224_3898549_-	PRK09939, PRK09939, acid resistance putative oxidoreductase YdeP	NA|67aa|down_1|CP027108.1_3899332_3899533_+	NA	NA|356aa|down_2|CP027108.1_3899643_3900711_-	PRK10536, PRK10536, phosphate starvation-inducible protein PhoH	NA|428aa|down_3|CP027108.1_3900970_3902254_-	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme	NA|376aa|down_4|CP027108.1_3902259_3903387_-	PRK10378, PRK10378, inactive ferrous ion transporter periplasmic protein EfeO; Provisional	NA|277aa|down_5|CP027108.1_3903442_3904273_-	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein	NA|395aa|down_6|CP027108.1_3904630_3905815_+	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|141aa|down_7|CP027108.1_3905844_3906267_-	pfam12098, DUF3574, Protein of unknown function (DUF3574)	NA|503aa|down_8|CP027108.1_3906384_3907893_-	PRK15419, PRK15419, sodium/proline symporter PutP	NA|75aa|down_9|CP027108.1_3907909_3908134_+	NA
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	21	4147795-4147871	20	CRISPRCasFinder	no	DinG	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Type IV-A	GGTTTTCGTAGGGCGGGTAAGCG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA,NA	NA|179aa|up_9|CP027108.1_4134242_4134779_+	PRK15289, lpfA, fimbrial protein; Provisional	NA|224aa|up_8|CP027108.1_4134845_4135517_+	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|821aa|up_7|CP027108.1_4135648_4138111_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|325aa|up_6|CP027108.1_4138134_4139109_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|170aa|up_5|CP027108.1_4139119_4139629_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	DinG|727aa|up_4|CP027108.1_4139619_4141800_-	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional	NA|282aa|up_3|CP027108.1_4142092_4142938_+	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional	NA|619aa|up_2|CP027108.1_4143045_4144902_+	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component	NA|491aa|up_1|CP027108.1_4144913_4146386_+	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|464aa|up_0|CP027108.1_4146395_4147787_+	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed	NA|468aa|down_0|CP027108.1_4148260_4149664_-	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional	NA|233aa|down_1|CP027108.1_4149889_4150588_+	PRK11552, PRK11552, putative DNA-binding transcriptional regulator; Provisional	NA|334aa|down_2|CP027108.1_4150580_4151582_+	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|577aa|down_3|CP027108.1_4151568_4153299_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|374aa|down_4|CP027108.1_4153295_4154417_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|369aa|down_5|CP027108.1_4154426_4155533_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|139aa|down_6|CP027108.1_4155494_4155911_-	pfam11076, YbhQ, Putative inner membrane protein YbhQ	NA|254aa|down_7|CP027108.1_4156046_4156808_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|414aa|down_8|CP027108.1_4156804_4158046_+	PRK11263, PRK11263, cardiolipin synthase ClsB	NA|343aa|down_9|CP027108.1_4158045_4159074_+	COG0392, COG0392, Predicted integral membrane protein [Function unknown]
GCA_003516125.1_ASM351612v1	CP027108	Cronobacter sakazakii strain CS-931 plasmid pCsaCS931a, complete sequence	22	4164657-4164744	21	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	Orphan	AGCGCACCCACCACACAGCCCACGGAGC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	NA|74aa|up_7|CP027108.1_4159444_4159666_-,NA|60aa|down_1|CP027108.1_4167132_4167312_+,NA|79aa|down_2|CP027108.1_4167379_4167616_-	NA|414aa|up_9|CP027108.1_4156804_4158046_+	PRK11263, PRK11263, cardiolipin synthase ClsB	NA|343aa|up_8|CP027108.1_4158045_4159074_+	COG0392, COG0392, Predicted integral membrane protein [Function unknown]	NA|74aa|up_7|CP027108.1_4159444_4159666_-	NA	NA|236aa|up_6|CP027108.1_4159774_4160482_-	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|151aa|up_5|CP027108.1_4160576_4161029_-	PRK10678, moaE, molybdopterin synthase catalytic subunit MoaE	NA|82aa|up_4|CP027108.1_4161030_4161276_-	PRK11130, moaD, molybdopterin synthase small subunit; Provisional	NA|162aa|up_3|CP027108.1_4161268_4161754_-	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|171aa|up_2|CP027108.1_4161757_4162270_-	TIGR02667, Molybdenum_cofactor_biosynthesis_protein_B	NA|330aa|up_1|CP027108.1_4162291_4163281_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_0|CP027108.1_4163626_4164535_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|down_0|CP027108.1_4164877_4166899_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|60aa|down_1|CP027108.1_4167132_4167312_+	NA	NA|79aa|down_2|CP027108.1_4167379_4167616_-	NA	NA|236aa|down_3|CP027108.1_4167789_4168497_+	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE	NA|228aa|down_4|CP027108.1_4168493_4169177_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|253aa|down_5|CP027108.1_4169169_4169928_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|384aa|down_6|CP027108.1_4169911_4171063_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|down_7|CP027108.1_4171059_4172100_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|431aa|down_8|CP027108.1_4172181_4173474_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|227aa|down_9|CP027108.1_4173541_4174222_+	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein
