assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003515385.1_ASM351538v1	CP023016	Ralstonia solanacearum strain SL3022 chromosome, complete genome	1	1087595-1089637	1,1,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	Type I-E	GTGTTCCCCGCGTGGGCGGGGATGAACCG,GTGTTCCCCGCGTGGGCGGGGATGAACCG,GTGTTCCCCGCGTGGGCGGGGATGAACCG,GTGTTCCCCGCGTGGGCGGGGATGAACCG	29,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E	31,33,33,31	33	TypeI-E	WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA|79aa|up_6|CP023016.1_1081074_1081311_+,NA|107aa|up_4|CP023016.1_1082516_1082837_+,NA	NA|84aa|up_9|CP023016.1_1077049_1077301_+	TIGR02811, formate_dehydrogenase_accessory_protein_FdhX, formate dehydrogenase region TAT target	NA|999aa|up_8|CP023016.1_1077355_1080352_+	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|235aa|up_7|CP023016.1_1080367_1081072_+	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family	NA|79aa|up_6|CP023016.1_1081074_1081311_+	NA	NA|385aa|up_5|CP023016.1_1081334_1082489_+	COG2864, FdnI, Cytochrome b subunit of formate dehydrogenase [Energy production and conversion]	NA|107aa|up_4|CP023016.1_1082516_1082837_+	NA	NA|183aa|up_3|CP023016.1_1082915_1083464_+	pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC)	NA|292aa|up_2|CP023016.1_1083558_1084434_+	pfam02634, FdhD-NarQ, FdhD/NarQ family	NA|189aa|up_1|CP023016.1_1084602_1085169_+	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|760aa|up_0|CP023016.1_1085226_1087506_+	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]	cas3|911aa|down_0|CP023016.1_1089849_1092582_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|523aa|down_1|CP023016.1_1093060_1094629_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|201aa|down_2|CP023016.1_1094625_1095228_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|345aa|down_3|CP023016.1_1095247_1096282_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|258aa|down_4|CP023016.1_1096286_1097060_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|223aa|down_5|CP023016.1_1097056_1097725_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas1|297aa|down_6|CP023016.1_1097756_1098647_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|100aa|down_7|CP023016.1_1098643_1098943_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|472aa|down_8|CP023016.1_1102379_1103795_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|240aa|down_9|CP023016.1_1103903_1104623_-	COG5343, COG5343, Uncharacterized protein conserved in bacteria [Function unknown]
GCA_003515385.1_ASM351538v1	CP023016	Ralstonia solanacearum strain SL3022 chromosome, complete genome	2	1099012-1102328	2,2,3,4	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCAGGCGGGGATGAACCG,GTGTTCCCCGCGCAGGCGGGGATGAACCGN,GTGTTCCCCGCGCAGGCGGGGATGAACC,CGGTTCATCCCCGCCTGCGCGGGGA--ACACG	29,30,28,32	0	0	NA	NA	I-E:I-E:I-E:NA	54,54,47,47	54	TypeI-E	WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA,NA	NA|189aa|up_9|CP023016.1_1084602_1085169_+	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|760aa|up_8|CP023016.1_1085226_1087506_+	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]	cas3|911aa|up_7|CP023016.1_1089849_1092582_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|523aa|up_6|CP023016.1_1093060_1094629_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|201aa|up_5|CP023016.1_1094625_1095228_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|345aa|up_4|CP023016.1_1095247_1096282_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|258aa|up_3|CP023016.1_1096286_1097060_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|223aa|up_2|CP023016.1_1097056_1097725_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas1|297aa|up_1|CP023016.1_1097756_1098647_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|100aa|up_0|CP023016.1_1098643_1098943_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|472aa|down_0|CP023016.1_1102379_1103795_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|240aa|down_1|CP023016.1_1103903_1104623_-	COG5343, COG5343, Uncharacterized protein conserved in bacteria [Function unknown]	NA|335aa|down_2|CP023016.1_1109222_1110227_+	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|698aa|down_3|CP023016.1_1110241_1112335_+	PRK06975, PRK06975, bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed	NA|398aa|down_4|CP023016.1_1112337_1113531_+	COG3071, HemY, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]	NA|89aa|down_5|CP023016.1_1114120_1114387_-	COG5591, COG5591, Uncharacterized conserved protein [Function unknown]	NA|443aa|down_6|CP023016.1_1114532_1115861_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|253aa|down_7|CP023016.1_1116008_1116767_-	PRK07231, FabG-like, SDR family oxidoreductase	NA|479aa|down_8|CP023016.1_1116796_1118233_-	cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like	NA|176aa|down_9|CP023016.1_1118369_1118897_+	PRK01250, PRK01250, inorganic diphosphatase
GCA_003515385.1_ASM351538v1	CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1	1196375-1196977	1	CRISPRCasFinder	no		csa3	Orphan	AGCGTCGTGTTGGCGGCCAGCGCTTG	26	0	0	NA	NA	N:A	8	8	Orphan	WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA|142aa|up_0|CP023017.1_1195227_1195653_-,NA|76aa|down_4|CP023017.1_1203922_1204150_+,NA|341aa|down_5|CP023017.1_1204726_1205749_-,NA|145aa|down_6|CP023017.1_1207170_1207605_-,NA|95aa|down_7|CP023017.1_1207649_1207934_-,NA|125aa|down_8|CP023017.1_1210416_1210791_-	NA|319aa|up_9|CP023017.1_1181490_1182447_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|222aa|up_8|CP023017.1_1185497_1186163_-	TIGR01428, Haloacetate_dehalogenase, 2-haloalkanoic acid dehalogenase, type II	NA|492aa|up_7|CP023017.1_1186374_1187850_-	pfam00171, Aldedh, Aldehyde dehydrogenase family	NA|296aa|up_6|CP023017.1_1188100_1188988_+	pfam18014, Acetyltransf_18, Acetyltransferase (GNAT) domain	NA|311aa|up_5|CP023017.1_1189044_1189977_+	cd12164, GDH_like_2, Putative glycerate dehydrogenase and related proteins of the D-specific 2-hydroxy dehydrogenase family	NA|165aa|up_4|CP023017.1_1191619_1192114_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|125aa|up_3|CP023017.1_1192124_1192499_+	pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain	NA|467aa|up_2|CP023017.1_1192501_1193902_+	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]	NA|391aa|up_1|CP023017.1_1193898_1195071_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|142aa|up_0|CP023017.1_1195227_1195653_-	NA	NA|591aa|down_0|CP023017.1_1198441_1200214_-	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|118aa|down_1|CP023017.1_1200980_1201334_-	cd02227, cupin_TM1112-like, Thermotoga maritima TM1112 and related proteins, cupin domain	NA|394aa|down_2|CP023017.1_1201370_1202552_-	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|233aa|down_3|CP023017.1_1202548_1203247_-	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase	NA|76aa|down_4|CP023017.1_1203922_1204150_+	NA	NA|341aa|down_5|CP023017.1_1204726_1205749_-	NA	NA|145aa|down_6|CP023017.1_1207170_1207605_-	NA	NA|95aa|down_7|CP023017.1_1207649_1207934_-	NA	NA|125aa|down_8|CP023017.1_1210416_1210791_-	NA	NA|300aa|down_9|CP023017.1_1210914_1211814_-	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]
GCA_003515385.1_ASM351538v1	CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	2	1197239-1197336	2	CRISPRCasFinder	no		csa3	Orphan	AGCGTCGTGTTGGCGGCCAGCGCTTG	26	0	0	NA	NA	N:A	1	1	Orphan	WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	NA|142aa|up_0|CP023017.1_1195227_1195653_-,NA|76aa|down_4|CP023017.1_1203922_1204150_+,NA|341aa|down_5|CP023017.1_1204726_1205749_-,NA|145aa|down_6|CP023017.1_1207170_1207605_-,NA|95aa|down_7|CP023017.1_1207649_1207934_-,NA|125aa|down_8|CP023017.1_1210416_1210791_-	NA|319aa|up_9|CP023017.1_1181490_1182447_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|222aa|up_8|CP023017.1_1185497_1186163_-	TIGR01428, Haloacetate_dehalogenase, 2-haloalkanoic acid dehalogenase, type II	NA|492aa|up_7|CP023017.1_1186374_1187850_-	pfam00171, Aldedh, Aldehyde dehydrogenase family	NA|296aa|up_6|CP023017.1_1188100_1188988_+	pfam18014, Acetyltransf_18, Acetyltransferase (GNAT) domain	NA|311aa|up_5|CP023017.1_1189044_1189977_+	cd12164, GDH_like_2, Putative glycerate dehydrogenase and related proteins of the D-specific 2-hydroxy dehydrogenase family	NA|165aa|up_4|CP023017.1_1191619_1192114_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|125aa|up_3|CP023017.1_1192124_1192499_+	pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain	NA|467aa|up_2|CP023017.1_1192501_1193902_+	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]	NA|391aa|up_1|CP023017.1_1193898_1195071_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|142aa|up_0|CP023017.1_1195227_1195653_-	NA	NA|591aa|down_0|CP023017.1_1198441_1200214_-	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|118aa|down_1|CP023017.1_1200980_1201334_-	cd02227, cupin_TM1112-like, Thermotoga maritima TM1112 and related proteins, cupin domain	NA|394aa|down_2|CP023017.1_1201370_1202552_-	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|233aa|down_3|CP023017.1_1202548_1203247_-	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase	NA|76aa|down_4|CP023017.1_1203922_1204150_+	NA	NA|341aa|down_5|CP023017.1_1204726_1205749_-	NA	NA|145aa|down_6|CP023017.1_1207170_1207605_-	NA	NA|95aa|down_7|CP023017.1_1207649_1207934_-	NA	NA|125aa|down_8|CP023017.1_1210416_1210791_-	NA	NA|300aa|down_9|CP023017.1_1210914_1211814_-	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]
