assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003491165.1_ASM349116v1	CP023061	Escherichia coli strain FORC_069 chromosome, complete genome	1	1118185-1119006	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	cas3,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol	Unclear	GAGTTCCCCGCGCCAGCGGGGATAAACC,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	13,13,13	13	Unclear	cas3,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol	NA|40aa|up_3|CP023061.1_1115932_1116052_-,NA|47aa|up_1|CP023061.1_1116894_1117035_-,NA	NA|745aa|up_9|CP023061.1_1108940_1111175_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_8|CP023061.1_1111252_1111501_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_7|CP023061.1_1111500_1111836_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_6|CP023061.1_1111906_1112698_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_5|CP023061.1_1112925_1114563_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_4|CP023061.1_1114650_1115949_+	PRK00077, eno, enolase; Provisional	NA|40aa|up_3|CP023061.1_1115932_1116052_-	NA	NA|235aa|up_2|CP023061.1_1116008_1116713_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|CP023061.1_1116894_1117035_-	NA	NA|224aa|up_0|CP023061.1_1117173_1117845_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|CP023061.1_1119644_1121123_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|CP023061.1_1121149_1122427_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|CP023061.1_1122745_1123531_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|CP023061.1_1123600_1125055_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|CP023061.1_1125076_1126486_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|CP023061.1_1126463_1127243_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|CP023061.1_1127239_1128100_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|CP023061.1_1128247_1128823_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|CP023061.1_1128839_1129100_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|CP023061.1_1129090_1130362_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCA_003491165.1_ASM349116v1	CP023061	Escherichia coli strain FORC_069 chromosome, complete genome	3	2372205-2372328	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol	NA|46aa|up_8|CP023061.1_2364127_2364265_-,NA	NA|57aa|up_9|CP023061.1_2363666_2363837_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|46aa|up_8|CP023061.1_2364127_2364265_-	NA	NA|209aa|up_7|CP023061.1_2364292_2364919_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|CP023061.1_2364939_2367042_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|CP023061.1_2367054_2367693_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|185aa|up_4|CP023061.1_2367870_2368425_+	COG0437, HybA, Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion]	NA|262aa|up_3|CP023061.1_2368421_2369207_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|CP023061.1_2369210_2370023_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|CP023061.1_2370034_2371639_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|CP023061.1_2371764_2372070_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|CP023061.1_2372642_2373899_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|CP023061.1_2373939_2375313_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|CP023061.1_2375527_2376169_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|CP023061.1_2376208_2377357_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|CP023061.1_2377647_2378859_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|CP023061.1_2378971_2379904_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|CP023061.1_2379900_2380926_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|40aa|down_7|CP023061.1_2381194_2381314_+	PRK14756, small_mem_YnhF, YnhF family membrane protein; Validated	NA|390aa|down_8|CP023061.1_2381479_2382649_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|CP023061.1_2382794_2383376_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCA_003491165.1_ASM349116v1	CP023061	Escherichia coli strain FORC_069 chromosome, complete genome	5	3566510-3566654	5	CRISPRCasFinder	no		cas3,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol	NA,NA|43aa|down_3|CP023061.1_3571768_3571897_-	NA|330aa|up_9|CP023061.1_3554408_3555398_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|CP023061.1_3555794_3556703_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|CP023061.1_3556894_3558916_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|CP023061.1_3559494_3560172_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|CP023061.1_3560164_3560920_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|CP023061.1_3560906_3562061_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|CP023061.1_3562057_3563098_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|411aa|up_2|CP023061.1_3563241_3564474_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|CP023061.1_3564532_3565009_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|CP023061.1_3565160_3566444_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|CP023061.1_3566677_3568939_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|CP023061.1_3569121_3570555_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|333aa|down_2|CP023061.1_3570630_3571629_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|43aa|down_3|CP023061.1_3571768_3571897_-	NA	NA|318aa|down_4|CP023061.1_3571866_3572820_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_5|CP023061.1_3572860_3573856_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|307aa|down_6|CP023061.1_3573908_3574829_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_7|CP023061.1_3574829_3575888_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_8|CP023061.1_3575890_3576580_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_9|CP023061.1_3576579_3577353_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional
GCA_003491165.1_ASM349116v1	CP023061	Escherichia coli strain FORC_069 chromosome, complete genome	6	3806480-3806576	6	CRISPRCasFinder	no		cas3,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol	NA,NA|39aa|down_7|CP023061.1_3814711_3814828_+	NA|231aa|up_9|CP023061.1_3798265_3798958_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|CP023061.1_3799177_3799720_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|CP023061.1_3800200_3801067_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|CP023061.1_3801068_3801281_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|CP023061.1_3801388_3801910_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|CP023061.1_3801945_3803331_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|CP023061.1_3803504_3803999_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|CP023061.1_3804001_3804724_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|CP023061.1_3804841_3805351_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|CP023061.1_3805347_3806415_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|CP023061.1_3806609_3807503_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|CP023061.1_3807499_3808315_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|CP023061.1_3808325_3809585_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|CP023061.1_3809594_3811262_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|CP023061.1_3811578_3812628_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|CP023061.1_3812649_3813885_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|CP023061.1_3813895_3814681_+	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only]	NA|39aa|down_7|CP023061.1_3814711_3814828_+	NA	NA|382aa|down_8|CP023061.1_3814809_3815955_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_9|CP023061.1_3815976_3817278_-	PRK11412, PRK11412, uracil/xanthine transporter
