assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003490125.1_ASM349012v1	CP032051	Staphylococcus aureus strain O17 chromosome, complete genome	1	615310-615392	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	AATTCTACAGGCAATGCGAGTTGG	24	1	2	615334-615368|615334-615368	CP032051.1_812602-812568|CP032051.1_1022305-1022271	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|122aa|down_3|CP032051.1_620263_620629_+,NA|93aa|down_4|CP032051.1_620631_620910_+	NA|1080aa|up_9|CP032051.1_603315_606555_+	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD	NA|491aa|up_8|CP032051.1_606673_608146_+	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|497aa|up_7|CP032051.1_608268_609759_-	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|293aa|up_6|CP032051.1_610040_610919_-	PRK13674, PRK13674, GTP cyclohydrolase I FolE2	NA|222aa|up_5|CP032051.1_610931_611597_-	TIGR04000, thiol_BshB2, bacillithiol biosynthesis deacetylase BshB2	NA|123aa|up_4|CP032051.1_611610_611979_-	pfam08830, DUF1806, Protein of unknown function (DUF1806)	NA|253aa|up_3|CP032051.1_612248_613007_+	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|211aa|up_2|CP032051.1_613083_613716_+	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase	NA|183aa|up_1|CP032051.1_613717_614266_+	TIGR03127, RuMP_HxlB, 6-phospho 3-hexuloisomerase	NA|216aa|up_0|CP032051.1_614378_615026_+	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|467aa|down_0|CP032051.1_615827_617228_+	cd17366, MFS_ProP, Proline/betaine transporter of the Major Facilitator Superfamily of transporters	NA|459aa|down_1|CP032051.1_617771_619148_+	cd17633, AFD_YhfT-like, fatty acid-CoA ligase VraA	NA|380aa|down_2|CP032051.1_619149_620289_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|122aa|down_3|CP032051.1_620263_620629_+	NA	NA|93aa|down_4|CP032051.1_620631_620910_+	NA	NA|56aa|down_5|CP032051.1_621100_621268_-	pfam17412, VraX, Family of unknown function	NA|277aa|down_6|CP032051.1_621802_622633_-	COG0351, ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]	NA|219aa|down_7|CP032051.1_622816_623473_+	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|127aa|down_8|CP032051.1_623473_623854_+	pfam17261, DUF5327, Family of unknown function (DUF5327)	NA|123aa|down_9|CP032051.1_623986_624355_+	COG2363, COG2363, Uncharacterized small membrane protein [Function unknown]
GCA_003490125.1_ASM349012v1	CP032051	Staphylococcus aureus strain O17 chromosome, complete genome	2	713589-713688	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	AAGATCCCCTAATTAATAAATTAAAAGGGG	30	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|230aa|down_1|CP032051.1_715509_716199_-,NA|124aa|down_3|CP032051.1_716836_717208_+,NA|100aa|down_4|CP032051.1_717345_717645_+	NA|206aa|up_9|CP032051.1_702764_703382_+	COG1392, COG1392, Phosphate transport regulator (distant homolog of PhoU) [Inorganic ion transport and metabolism]	NA|336aa|up_8|CP032051.1_703397_704405_+	pfam01384, PHO4, Phosphate transporter family	NA|266aa|up_7|CP032051.1_704990_705788_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|215aa|up_6|CP032051.1_706148_706793_+	COG0670, COG0670, Integral membrane protein, interacts with FtsH [General function prediction only]	NA|717aa|up_5|CP032051.1_707488_709639_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|146aa|up_4|CP032051.1_709706_710144_+	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|239aa|up_3|CP032051.1_710333_711050_+	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator	NA|158aa|up_2|CP032051.1_711049_711523_+	COG3542, COG3542, Uncharacterized conserved protein [Function unknown]	NA|215aa|up_1|CP032051.1_711875_712520_+	COG2306, COG2306, Predicted RNA-binding protein, associated with RNAses E/G family [General function prediction only]	NA|289aa|up_0|CP032051.1_712635_713502_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|163aa|down_0|CP032051.1_714922_715411_+	COG2839, COG2839, Uncharacterized protein conserved in bacteria [Function unknown]	NA|230aa|down_1|CP032051.1_715509_716199_-	NA	NA|148aa|down_2|CP032051.1_716325_716769_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|124aa|down_3|CP032051.1_716836_717208_+	NA	NA|100aa|down_4|CP032051.1_717345_717645_+	NA	NA|181aa|down_5|CP032051.1_717724_718267_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|189aa|down_6|CP032051.1_718361_718928_-	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only]	NA|153aa|down_7|CP032051.1_718929_719388_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|228aa|down_8|CP032051.1_719390_720074_-	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|292aa|down_9|CP032051.1_720244_721120_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase
GCA_003490125.1_ASM349012v1	CP032051	Staphylococcus aureus strain O17 chromosome, complete genome	3	861034-861167	1	PILER-CR	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GGCGGGGCCCCAACATAGAG	20	2	10	861054-861092|861113-861148|861113-861148|861113-861148|861113-861148|861113-861148|861113-861148|861113-861148|861113-861148|861113-861148	CP032051.1_533409-533447|CP032051.1_43303-43268|CP032051.1_142886-142851|CP032051.1_533295-533330|CP032051.1_615411-615446|CP032051.1_1608837-1608872|CP032051.1_2070324-2070359|CP032051.1_2329566-2329601|CP032051.1_2329622-2329657|CP032051.1_2464321-2464286	NA	2	2	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|38aa|up_6|CP032051.1_855747_855861_+,NA|105aa|down_7|CP032051.1_868915_869230_-	NA|107aa|up_9|CP032051.1_854325_854646_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_8|CP032051.1_854789_855146_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_7|CP032051.1_855303_855684_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|38aa|up_6|CP032051.1_855747_855861_+	NA	NA|293aa|up_5|CP032051.1_855862_856741_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|131aa|up_4|CP032051.1_857266_857659_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|up_3|CP032051.1_857651_857948_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|up_2|CP032051.1_858197_859223_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|up_1|CP032051.1_859215_859911_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|up_0|CP032051.1_859928_860750_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|65aa|down_0|CP032051.1_861454_861649_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_1|CP032051.1_861882_862734_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|254aa|down_2|CP032051.1_863062_863824_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|436aa|down_3|CP032051.1_863921_865229_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|414aa|down_4|CP032051.1_865343_866585_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|155aa|down_5|CP032051.1_866574_867039_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|466aa|down_6|CP032051.1_867189_868587_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|105aa|down_7|CP032051.1_868915_869230_-	NA	NA|347aa|down_8|CP032051.1_869594_870635_+	COG4536, CorB, Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism]	NA|356aa|down_9|CP032051.1_870648_871716_+	COG2070, COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
GCA_003490125.1_ASM349012v1	CP032051	Staphylococcus aureus strain O17 chromosome, complete genome	4	906116-906197	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CAATTTCTACAGGCAATGCAAGTTGG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA	NA|499aa|up_9|CP032051.1_895001_896498_-	PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|110aa|up_8|CP032051.1_896490_896820_-	PRK08600, PRK08600, putative monovalent cation/H+ antiporter subunit C; Reviewed	NA|143aa|up_7|CP032051.1_896831_897260_-	PRK12573, PRK12573, Na(+)/H(+) antiporter subunit B	NA|802aa|up_6|CP032051.1_897252_899658_-	PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed	NA|128aa|up_5|CP032051.1_899788_900172_-	pfam08810, KapB, Kinase associated protein B	NA|198aa|up_4|CP032051.1_900235_900829_+	cd01927, cyclophilin_WD40, cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain	NA|126aa|up_3|CP032051.1_901244_901622_+	COG1098, VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis]	NA|376aa|up_2|CP032051.1_901982_903110_+	cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 4	NA|397aa|up_1|CP032051.1_903417_904608_+	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional	NA|415aa|up_0|CP032051.1_904716_905961_+	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	NA|310aa|down_0|CP032051.1_906354_907284_-	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins	NA|460aa|down_1|CP032051.1_907525_908905_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|402aa|down_2|CP032051.1_908894_910100_-	PRK00509, PRK00509, argininosuccinate synthase; Provisional	NA|444aa|down_3|CP032051.1_910449_911781_+	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional	NA|192aa|down_4|CP032051.1_912652_913228_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|175aa|down_5|CP032051.1_913232_913757_+	TIGR02227, Inactive_signal_peptidase_IA	NA|192aa|down_6|CP032051.1_913772_914348_+	TIGR02227, Inactive_signal_peptidase_IA	NA|1159aa|down_7|CP032051.1_914507_917984_+	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|1218aa|down_8|CP032051.1_917984_921638_+	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|301aa|down_9|CP032051.1_921803_922706_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]
GCA_003490125.1_ASM349012v1	CP032051	Staphylococcus aureus strain O17 chromosome, complete genome	6	1038513-1038609	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GCATAAAAGCCCCTAACAACTAAAAGTTGTAAGG	34	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|432aa|down_0|CP032051.1_1038904_1040200_+	NA|224aa|up_9|CP032051.1_1026310_1026982_+	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|730aa|up_8|CP032051.1_1026974_1029164_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|495aa|up_7|CP032051.1_1029142_1030627_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|343aa|up_6|CP032051.1_1030619_1031648_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|189aa|up_5|CP032051.1_1031650_1032217_+	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]	NA|493aa|up_4|CP032051.1_1032231_1033710_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|416aa|up_3|CP032051.1_1033731_1034979_+	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional	NA|269aa|up_2|CP032051.1_1035244_1036051_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|407aa|up_1|CP032051.1_1036043_1037264_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|192aa|up_0|CP032051.1_1037459_1038035_-	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]	NA|432aa|down_0|CP032051.1_1038904_1040200_+	NA	NA|391aa|down_1|CP032051.1_1040623_1041796_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|181aa|down_2|CP032051.1_1041849_1042392_+	pfam05128, DUF697, Domain of unknown function (DUF697)	NA|89aa|down_3|CP032051.1_1042545_1042812_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|573aa|down_4|CP032051.1_1042814_1044533_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|78aa|down_5|CP032051.1_1044767_1045001_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|454aa|down_6|CP032051.1_1045198_1046560_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|340aa|down_7|CP032051.1_1046556_1047576_+	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]	NA|221aa|down_8|CP032051.1_1047708_1048371_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	NA|566aa|down_9|CP032051.1_1048484_1050182_-	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]
GCA_003490125.1_ASM349012v1	CP032051	Staphylococcus aureus strain O17 chromosome, complete genome	7	1880115-1880197	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CAACATAGTGAAATTGGATCCTCA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|141aa|up_0|CP032051.1_1879368_1879791_-,NA|51aa|down_0|CP032051.1_1880289_1880442_+,NA|51aa|down_1|CP032051.1_1880506_1880659_-	NA|979aa|up_9|CP032051.1_1866859_1869796_-	COG4717, COG4717, Uncharacterized conserved protein [Function unknown]	NA|399aa|up_8|CP032051.1_1869785_1870982_-	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]	NA|115aa|up_7|CP032051.1_1872059_1872404_-	PRK13676, PRK13676, YlbF/YmcA family competence regulator	NA|375aa|up_6|CP032051.1_1872472_1873597_-	COG4399, COG4399, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_5|CP032051.1_1873775_1874240_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|208aa|up_4|CP032051.1_1874595_1875219_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|371aa|up_3|CP032051.1_1875240_1876353_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|274aa|up_2|CP032051.1_1876515_1877337_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|462aa|up_1|CP032051.1_1877787_1879173_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|141aa|up_0|CP032051.1_1879368_1879791_-	NA	NA|51aa|down_0|CP032051.1_1880289_1880442_+	NA	NA|51aa|down_1|CP032051.1_1880506_1880659_-	NA	NA|200aa|down_2|CP032051.1_1880683_1881283_-	COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]	NA|157aa|down_3|CP032051.1_1881441_1881912_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|376aa|down_4|CP032051.1_1881916_1883044_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|243aa|down_5|CP032051.1_1883194_1883923_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|486aa|down_6|CP032051.1_1883909_1885367_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|354aa|down_7|CP032051.1_1885624_1886686_-	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|149aa|down_8|CP032051.1_1895000_1895447_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|317aa|down_9|CP032051.1_1895543_1896494_-	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family
GCA_003490125.1_ASM349012v1	CP032051	Staphylococcus aureus strain O17 chromosome, complete genome	8	2294879-2295097	1	CRT	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GTTGGGGCCCCGTTCCCCAACTTGCACATTATTGTAAGCTG	41	2	9	2294920-2294937|2294979-2294996|2294979-2294996|2294979-2294996|2294979-2294996|2294979-2294996|2294979-2294996|2294979-2294996|2294979-2294996	CP032051.1_869705-869688|CP032051.1_780137-780120|CP032051.1_1122885-1122868|CP032051.1_2434941-2434924|CP032051.1_1771687-1771670|CP032051.1_452426-452409|CP032051.1_657056-657073|CP032051.1_1716562-1716545|CP032051.1_1931351-1931368	NA	3	3	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|55aa|up_7|CP032051.1_2285414_2285579_+,NA|106aa|up_6|CP032051.1_2285813_2286131_+,NA	NA|288aa|up_9|CP032051.1_2283091_2283955_+	COG4975, GlcU, Putative glucose uptake permease [Carbohydrate transport and metabolism]	NA|297aa|up_8|CP032051.1_2284373_2285264_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|55aa|up_7|CP032051.1_2285414_2285579_+	NA	NA|106aa|up_6|CP032051.1_2285813_2286131_+	NA	NA|1056aa|up_5|CP032051.1_2286317_2289485_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_4|CP032051.1_2289601_2290867_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|255aa|up_3|CP032051.1_2291498_2292263_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_2|CP032051.1_2292425_2292866_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_1|CP032051.1_2292858_2294070_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_0|CP032051.1_2294171_2294522_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|341aa|down_0|CP032051.1_2295279_2296302_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|CP032051.1_2296321_2296921_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|CP032051.1_2296927_2297161_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|CP032051.1_2297166_2297613_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|CP032051.1_2297626_2298112_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|CP032051.1_2298108_2299368_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|CP032051.1_2299430_2299925_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|CP032051.1_2299926_2300433_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|303aa|down_8|CP032051.1_2300463_2301372_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|CP032051.1_2301636_2302242_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
GCA_003490125.1_ASM349012v1	CP032051	Staphylococcus aureus strain O17 chromosome, complete genome	10	2736684-2736762	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTCTCTATGTTGGGGCCCCGCCAA	24	1	14	2736708-2736738|2736708-2736738|2736708-2736738|2736708-2736738|2736708-2736738|2736708-2736738|2736708-2736738|2736708-2736738|2736708-2736738|2736708-2736738|2736708-2736738|2736708-2736738|2736708-2736738|2736708-2736738	CP032051.1_615329-615299|CP032051.1_812665-812695|CP032051.1_1022310-1022340|CP032051.1_1022368-1022398|CP032051.1_1332201-1332171|CP032051.1_1407476-1407506|CP032051.1_2310406-2310376|CP032051.1_2766122-2766152|CP032051.1_1608812-1608782|CP032051.1_2766180-2766210|CP032051.1_533441-533411|CP032051.1_926263-926293|CP032051.1_1628384-1628414|CP032051.1_1716583-1716553	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|88aa|down_1|CP032051.1_2739622_2739886_-,NA|52aa|down_2|CP032051.1_2740108_2740264_-,NA|39aa|down_3|CP032051.1_2740271_2740388_-	NA|159aa|up_9|CP032051.1_2728132_2728609_-	PRK05528, PRK05528, peptide-methionine (S)-S-oxide reductase	NA|167aa|up_8|CP032051.1_2728611_2729112_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|256aa|up_7|CP032051.1_2729346_2730114_-	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|231aa|up_6|CP032051.1_2730110_2730803_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|229aa|up_5|CP032051.1_2730819_2731506_-	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane]	NA|187aa|up_4|CP032051.1_2732329_2732890_-	pfam18665, TetR_C_37, Tetracyclin repressor-like, C-terminal domain	NA|400aa|up_3|CP032051.1_2733092_2734292_+	TIGR03937, Poly-beta-16-N-acetyl-D-glucosamine_synthase, poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA|102aa|up_2|CP032051.1_2734255_2734561_+	TIGR03932, IcaD_partial, intracellular adhesion protein D	NA|291aa|up_1|CP032051.1_2734557_2735430_+	TIGR03933, Poly-beta-16-N-acetyl-D-glucosamine_N-deacetylase, intercellular adhesin biosynthesis polysaccharide N-deacetylase	NA|351aa|up_0|CP032051.1_2735416_2736469_+	COG3936, COG3936, Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation [Carbohydrate transport and metabolism]	NA|682aa|down_0|CP032051.1_2736859_2738905_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|88aa|down_1|CP032051.1_2739622_2739886_-	NA	NA|52aa|down_2|CP032051.1_2740108_2740264_-	NA	NA|39aa|down_3|CP032051.1_2740271_2740388_-	NA	NA|211aa|down_4|CP032051.1_2740422_2741055_-	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA|253aa|down_5|CP032051.1_2741051_2741810_-	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional	NA|235aa|down_6|CP032051.1_2741806_2742511_-	PRK13587, PRK13587, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional	NA|193aa|down_7|CP032051.1_2742503_2743082_-	PRK13142, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional	NA|193aa|down_8|CP032051.1_2743078_2743657_-	cd07914, IGPD, Imidazoleglycerol-phosphate dehydratase	NA|338aa|down_9|CP032051.1_2743625_2744639_-	COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
GCA_003490125.1_ASM349012v1	CP032051	Staphylococcus aureus strain O17 chromosome, complete genome	11	2766003-2766088	9	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAACTTGCACATTATTGTAAGCTGACTTT	30	1	9	2766033-2766058|2766033-2766058|2766033-2766058|2766033-2766058|2766033-2766058|2766033-2766058|2766033-2766058|2766033-2766058|2766033-2766058	CP032051.1_615418-615393|CP032051.1_1608844-1608819|CP032051.1_2329629-2329604|CP032051.1_2129532-2129507|CP032051.1_1628465-1628490|CP032051.1_1628488-1628513|CP032051.1_2329573-2329548|CP032051.1_2434992-2434967|CP032051.1_2464314-2464339	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|64aa|up_4|CP032051.1_2763222_2763414_+,NA	NA|351aa|up_9|CP032051.1_2757297_2758350_+	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism]	NA|271aa|up_8|CP032051.1_2758592_2759405_+	COG2162, NhoA, Arylamine N-acetyltransferase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|171aa|up_7|CP032051.1_2759700_2760213_-	COG3247, HdeD, Uncharacterized conserved protein [Function unknown]	NA|253aa|up_6|CP032051.1_2760502_2761261_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|627aa|up_5|CP032051.1_2761250_2763131_+	pfam02687, FtsX, FtsX-like permease family	NA|64aa|up_4|CP032051.1_2763222_2763414_+	NA	NA|76aa|up_3|CP032051.1_2763779_2764007_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|190aa|up_2|CP032051.1_2764133_2764703_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|127aa|up_1|CP032051.1_2764962_2765343_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|118aa|up_0|CP032051.1_2765425_2765779_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|280aa|down_0|CP032051.1_2766446_2767286_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|240aa|down_1|CP032051.1_2767328_2768048_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|595aa|down_2|CP032051.1_2768047_2769832_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|460aa|down_3|CP032051.1_2769991_2771371_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|118aa|down_4|CP032051.1_2771513_2771867_-	PRK00499, rnpA, ribonuclease P; Reviewed	NA|46aa|down_5|CP032051.1_2771987_2772125_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
