The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4114585	206142	293077	4114585	transposase,protease,coat	Clostridium_phage(11.11%)	73	NA	NA
AXU52061.1|206142_207105_+|protease	membrane-associated CAAX amino terminal protease	protease	NA	NA	NA	NA
AXU52062.1|207203_208184_-|protease	membrane-associated caaX amino terminal protease	protease	NA	NA	NA	NA
AXU52063.1|209311_209779_+	glyoxalase	NA	NA	NA	NA	NA
AXU52064.1|210950_211664_+	two-component response regulator	NA	A0A2R2ZGH8	Clostridioides_phage	35.5	5.9e-29
AXU52065.1|211936_213709_+	lantibiotic ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.9	5.4e-15
AXU52066.1|213730_215152_+	radical SAM family protein	NA	NA	NA	NA	NA
AXU52067.1|215180_216251_+	peptide maturation system protein	NA	NA	NA	NA	NA
AXU52068.1|216266_216518_+	peptide maturation system acyl carrier-related protein	NA	NA	NA	NA	NA
AXU52069.1|216568_216772_+	hypothetical protein	NA	NA	NA	NA	NA
AXU52070.1|217257_217551_+	hypothetical protein	NA	NA	NA	NA	NA
AXU52071.1|217682_219032_-	amino acid transporter	NA	NA	NA	NA	NA
AXU52072.1|219068_220289_-	amidohydrolase/peptidase	NA	NA	NA	NA	NA
AXU52073.1|220657_222670_-	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA	NA
AXU52074.1|223140_223791_+	cyclic nucleotide-binding protein	NA	NA	NA	NA	NA
AXU52075.1|223930_225307_-	drug/sodium antiporter	NA	NA	NA	NA	NA
AXU52076.1|225322_227236_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	32.4	2.6e-63
AXU52077.1|227371_228004_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
AXU52078.1|228151_228682_+	formylmethanofuran dehydrogenase subunit E	NA	NA	NA	NA	NA
AXU52079.1|228857_229028_-	ferredoxin	NA	NA	NA	NA	NA
AXU52080.1|229312_230380_+	lipoprotein	NA	NA	NA	NA	NA
AXU52081.1|230549_232451_+	oxidoreductase, acetyl-CoA synthase subunit	NA	NA	NA	NA	NA
AXU52082.1|232431_232917_+	oxidoreductase, electron transfer subunit	NA	NA	NA	NA	NA
AXU52083.1|232891_234118_+	oxidoreductase, NAD/FAD binding subunit	NA	NA	NA	NA	NA
AXU52084.1|234256_235444_-	cyclopropane-fatty-acyl-phospholipid synthase	NA	A0A2I2L5L3	Orpheovirus	33.8	5.5e-48
AXU52085.1|235716_236541_+	ATP-binding protein	NA	NA	NA	NA	NA
AXU52086.1|236669_237935_+	NAD-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
AXU52087.1|238244_238736_+|protease	membrane-associated metalloprotease	protease	NA	NA	NA	NA
AXU52088.1|239066_240200_+|protease	membrane-associated metalloprotease	protease	NA	NA	NA	NA
AXU52089.1|241115_242138_+	cell wall hydrolase	NA	A0A0A8WF62	Clostridium_phage	55.8	4.3e-33
AXU52090.1|242433_243354_+	aspartate carbamoyltransferase catalytic chain	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	42.5	7.1e-59
AXU52091.1|243392_244085_+	dihydroorotate dehydrogenase electron transfer subunit	NA	NA	NA	NA	NA
AXU52092.1|244077_244980_+	dihydroorotate dehydrogenase 1B	NA	NA	NA	NA	NA
AXU52093.1|245064_245649_+	orotate phosphoribosyltransferase	NA	Q58MW1	Prochlorococcus_phage	28.1	2.2e-05
AXU52094.1|245863_246790_+	ketopantoate reductase	NA	NA	NA	NA	NA
AXU52095.1|246841_247732_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXU52096.1|247919_248951_+	membrane protein	NA	NA	NA	NA	NA
AXU52097.1|249244_250120_+	DNA glycosylase	NA	NA	NA	NA	NA
AXU52098.1|250137_251628_+	cardiolipin synthetase	NA	NA	NA	NA	NA
AXU52099.1|251820_252105_+	10 kDa chaperonin	NA	A0A221S4A8	uncultured_virus	42.6	1.4e-13
AXU52100.1|252137_253766_+	60 kDa chaperonin	NA	A0A240F779	uncultured_virus	55.8	3.4e-157
AXU52101.1|254027_254768_+	NCAIR mutase-like protein	NA	A0A288TYA6	Enterococcus_phage	44.8	4.0e-20
AXU52102.1|254851_255586_+	hypothetical protein	NA	NA	NA	NA	NA
AXU52103.1|255615_256035_+	hypothetical protein	NA	NA	NA	NA	NA
AXU52104.1|256416_257952_+	GMP synthase	NA	A0A1V0SH76	Hokovirus	33.7	1.2e-23
AXU52105.1|258490_259921_+	membrane-associated nucleotidase	NA	NA	NA	NA	NA
AXU52106.1|260068_260377_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXU52107.1|260413_260935_+	chromate transporter	NA	NA	NA	NA	NA
AXU52108.1|261609_265038_-	DNA repair protein	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	37.6	4.8e-177
AXU52109.1|265356_267591_+	signaling protein	NA	NA	NA	NA	NA
AXU52110.1|267846_269877_+	transcription antiterminator	NA	NA	NA	NA	NA
AXU52111.1|269873_270326_+	PTS system transporter subunit IIA	NA	NA	NA	NA	NA
AXU52112.1|270327_271383_+	fructose-like permease EIIC subunit 2	NA	NA	NA	NA	NA
AXU52113.1|271449_271758_+	PTS system fructose-like transporter subunit EIIB	NA	NA	NA	NA	NA
AXU52114.1|271861_273127_+	sugar-phosphate kinase	NA	NA	NA	NA	NA
AXU52115.1|273214_273931_+	hydrolase	NA	NA	NA	NA	NA
AXU52116.1|274125_274419_-|coat	spore coat protein	coat	NA	NA	NA	NA
AXU52117.1|274424_274640_-	hypothetical protein	NA	NA	NA	NA	NA
AXU52118.1|275087_275486_+|transposase	transposase	transposase	A0A0A8WIU6	Clostridium_phage	96.2	2.5e-69
AXU52119.1|275482_276646_+|transposase	transposase	transposase	A0A0A8WI33	Clostridium_phage	99.0	1.7e-219
AXU52120.1|276900_277413_-	nitroreductase	NA	A0A1V0E011	Clostridioides_phage	88.2	1.6e-84
AXU52121.1|277862_278339_+	phosphoribosylaminoimidazole carboxylase catalytic subunit	NA	A0A2P0VNU7	Tetraselmis_virus	45.8	6.9e-26
AXU52122.1|278344_279043_+	phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	43.9	1.5e-45
AXU52123.1|279054_280422_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.0	2.6e-49
AXU52124.1|280415_281492_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.2	1.3e-64
AXU52125.1|281485_282079_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.4	7.3e-25
AXU52126.1|282071_283604_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	49.7	2.3e-38
AXU52127.1|283614_284865_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
AXU52128.1|284889_288696_+	formylglycinamidine ribonucleotide synthetase	NA	A6N228	Microbacterium_phage	24.5	1.0e-31
AXU52129.1|288901_289774_+	dtdp-4-dehydrorhamnose reductase	NA	H9NCE8	Sphingomonas_phage	30.0	1.7e-14
AXU52130.1|289882_290752_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	61.1	8.1e-97
AXU52131.1|290800_291358_+	dtdp-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.6	1.3e-47
AXU52132.1|291395_292379_+	dtdp-glucose 4,6-dehydratase	NA	A0A291LAD7	Escherichia_phage	47.0	5.0e-79
AXU52133.1|292408_293077_+	transglycosylase	NA	A0A0H3V0Q1	Geobacillus_virus	46.9	5.3e-24
>prophage 2
CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4114585	1401620	1425993	4114585	tail	Clostridium_phage(54.55%)	29	NA	NA
AXU53093.1|1401620_1401821_+	cold shock protein	NA	A0A1W6JNX5	Morganella_phage	66.2	2.7e-16
AXU53094.1|1402241_1402670_+	regulatory protein	NA	NA	NA	NA	NA
AXU53095.1|1402812_1403568_-	peptidyl-prolyl isomerase	NA	NA	NA	NA	NA
AXU53096.1|1403688_1404105_-	hypothetical protein	NA	NA	NA	NA	NA
AXU53097.1|1404268_1404775_-	phage protein	NA	A0A0A8WEK1	Clostridium_phage	67.1	4.0e-56
AXU53098.1|1404856_1405177_-	phage repressor	NA	A0A0A8WE28	Clostridium_phage	54.5	3.7e-23
AXU53099.1|1405345_1405543_+	phage regulatory protein	NA	NA	NA	NA	NA
AXU53100.1|1405647_1406088_+	DNA-binding protein	NA	A0A090EUN5	Clostridium_phage	51.4	6.0e-32
AXU53101.1|1406336_1406780_+	hypothetical protein	NA	A0A1V0DZX9	Clostridioides_phage	36.1	1.7e-18
AXU53102.1|1406784_1407849_+	phage-like element pbsx protein xkdK	NA	A0A1V0DZX4	Clostridioides_phage	53.1	4.4e-97
AXU53103.1|1407862_1408291_+	phage-like element pbsx protein XkdM	NA	A0A1V0DZX1	Clostridioides_phage	51.8	2.8e-34
AXU53104.1|1408404_1408851_+	Phage XkdN-like protein	NA	A0A090EUD0	Clostridium_phage	36.0	8.2e-13
AXU53105.1|1408877_1409045_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53106.1|1409044_1411498_+	phage protein	NA	A0A1V0DZX3	Clostridioides_phage	61.0	6.1e-17
AXU53107.1|1411497_1411920_+	phage-like element pbsx protein xkdP	NA	A0A090DBR9	Clostridium_phage	71.1	1.7e-52
AXU53108.1|1412201_1413731_+	phage cell wall hydrolase	NA	A0A1V0DZX6	Clostridioides_phage	81.1	1.0e-243
AXU53109.1|1413746_1414073_+	hypothetical protein	NA	J9QE86	Clostridium_phage	94.4	1.0e-52
AXU53110.1|1414072_1414501_+	phage protein	NA	A0A0A8WJ32	Clostridium_phage	82.4	4.4e-64
AXU53111.1|1414493_1415546_+	phage protein	NA	A0A0A8WFP3	Clostridium_phage	70.4	1.3e-138
AXU53112.1|1415542_1416241_+	phage protein	NA	A0A090D815	Clostridium_phage	56.3	1.6e-47
AXU53113.1|1416241_1417228_+|tail	phage tail fiber protein	tail	A0A2H4J039	uncultured_Caudovirales_phage	45.8	3.4e-59
AXU53114.1|1417249_1422427_+	RCC1 domain-containing protein, alpha-tubulin suppressor	NA	A0A0A8WEY5	Clostridium_phage	26.7	3.5e-78
AXU53115.1|1422443_1422797_+	hypothetical protein	NA	A0A0A8WJF2	Clostridium_phage	42.1	4.2e-12
AXU53116.1|1423059_1423320_+	hypothetical protein	NA	E2ELK7	Clostridium_phage	90.6	9.9e-35
AXU53117.1|1423526_1423982_-	hypothetical protein	NA	NA	NA	NA	NA
AXU53118.1|1424209_1424629_-	phage regulatory protein	NA	S5MUV6	Brevibacillus_phage	37.2	2.4e-06
AXU53119.1|1424927_1425137_+	phage regulatory protein	NA	Q5YAA3	Bacillus_phage	47.2	5.9e-06
AXU53120.1|1425168_1425378_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53121.1|1425594_1425993_-	phage regulatory protein	NA	A0A1L2JY18	Aeribacillus_phage	29.7	2.7e-07
>prophage 3
CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4114585	1505431	1515158	4114585		Pandoravirus(37.5%)	11	NA	NA
AXU53190.1|1505431_1506016_+	para-aminobenzoate synthase glutamine amidotransferase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	52.6	1.4e-57
AXU53191.1|1506017_1507367_+	para-aminobenzoate synthase component I	NA	S4VNU7	Pandoravirus	41.2	2.2e-37
AXU53192.1|1507356_1508100_+	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
AXU53193.1|1508133_1508835_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53194.1|1508860_1509433_+	GTP cyclohydrolase I	NA	E7DN69	Pneumococcus_phage	51.6	3.0e-44
AXU53195.1|1509496_1510288_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	28.8	1.1e-23
AXU53196.1|1510298_1510664_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AXU53197.1|1510656_1511163_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	NA	S4VNV0	Pandoravirus	35.2	2.7e-12
AXU53198.1|1511143_1511929_+	chorismate biosynthesis-like protein	NA	E3T537	Cafeteria_roenbergensis_virus	27.9	1.7e-13
AXU53199.1|1512183_1513974_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	32.6	1.2e-51
AXU53200.1|1513991_1515158_+	RNA polymerase sigma factor (sigma-43)	NA	M4SMP8	Cyanophage	36.8	9.6e-37
>prophage 4
CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4114585	1639641	1695728	4114585	portal,holin,capsid,terminase,head,tail	Clostridium_phage(82.26%)	76	NA	NA
AXU53311.1|1639641_1641336_+	acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	29.5	7.2e-49
AXU53312.1|1641693_1642824_-	prophage lambdaba04, site-specific recombinase	NA	A0A0A8WIE1	Clostridium_phage	98.9	4.3e-215
AXU53313.1|1643063_1643570_-	putative Zn peptidase	NA	A0A0A8WEK1	Clostridium_phage	99.4	1.3e-86
AXU53314.1|1643647_1643989_-	phage repressor	NA	A0A0A8WE28	Clostridium_phage	88.5	5.8e-51
AXU53315.1|1644781_1644976_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53316.1|1645050_1645431_-	transcriptional regulator	NA	A0A0A8WF83	Clostridium_phage	64.7	9.1e-37
AXU53317.1|1645575_1645767_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53318.1|1645778_1646552_+	prophage antirepressor	NA	A0A0A8WIE3	Clostridium_phage	84.3	4.0e-47
AXU53319.1|1646557_1647361_+	phage anti-repressor	NA	X5JAW6	Clostridium_phage	68.8	1.2e-91
AXU53320.1|1647401_1648010_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53321.1|1648157_1648328_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53322.1|1648489_1648882_+	Helix-turn-helix domain protein	NA	A0A0A8WHS2	Clostridium_phage	89.9	5.3e-56
AXU53323.1|1648862_1649012_+	hypothetical protein	NA	A0A0A8WIF8	Clostridium_phage	89.4	4.2e-14
AXU53324.1|1649082_1649520_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53325.1|1649531_1650698_+	phage-like protein	NA	S5MUB5	Brevibacillus_phage	55.9	6.5e-118
AXU53326.1|1650712_1651048_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53327.1|1651100_1651673_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
AXU53328.1|1651695_1652268_+	phage-like protein	NA	S5MC21	Brevibacillus_phage	66.7	8.5e-63
AXU53329.1|1652267_1654226_+	dna-directed dna polymerase i	NA	A0A0A7RTL3	Clostridium_phage	68.8	3.3e-263
AXU53330.1|1654237_1656655_+	virulence-associated protein e	NA	A0A0A7RTG3	Clostridium_phage	67.9	0.0e+00
AXU53331.1|1656946_1657273_+	phage-like protein	NA	A0A2K5B272	Erysipelothrix_phage	55.4	8.7e-20
AXU53332.1|1657221_1658592_+	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	NA	A0A1S7FYY5	Listeria_phage	60.3	8.4e-157
AXU53333.1|1658745_1659225_+	sigma-70 region 4 type 2	NA	I2E8Y5	Clostridium_phage	45.9	8.5e-32
AXU53334.1|1659367_1659625_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53335.1|1659770_1660706_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53336.1|1660724_1661309_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53337.1|1661321_1662014_+	phage DNA-binding protein	NA	A0A0A8WFS6	Clostridium_phage	98.3	5.8e-122
AXU53338.1|1661991_1663245_+|terminase	phage terminase large subunit	terminase	X5JAB3	Clostridium_phage	98.8	5.2e-246
AXU53339.1|1663250_1664693_+|portal	phage portal protein	portal	A0A0A8WIH2	Clostridium_phage	94.4	1.2e-267
AXU53340.1|1664682_1666044_+|head	phage minor head protein	head	A0A0A8WIE7	Clostridium_phage	81.5	1.1e-188
AXU53341.1|1666046_1666208_+	hypothetical protein	NA	Q7Y4I8	Streptococcus_phage	60.4	5.2e-10
AXU53342.1|1666539_1666932_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53343.1|1666932_1667130_+	hypothetical protein	NA	NA	NA	NA	NA
AXU53344.1|1667172_1667403_+	hypothetical protein	NA	A0A090EUB5	Clostridium_phage	90.8	3.1e-32
AXU53345.1|1667447_1668011_+	phage scaffold protein	NA	X5JAB4	Clostridium_phage	100.0	4.9e-87
AXU53346.1|1668022_1668922_+|capsid	phage major capsid protein	capsid	A0A0A8WFI8	Clostridium_phage	92.0	1.6e-156
AXU53347.1|1668921_1669155_+	hypothetical protein	NA	A0A0A8WFD0	Clostridium_phage	96.1	3.2e-32
AXU53348.1|1669164_1669566_+	hypothetical protein	NA	A0A0A8WIE8	Clostridium_phage	88.0	3.9e-62
AXU53349.1|1669559_1669922_+	phage protein	NA	X5JAV9	Clostridium_phage	82.5	1.1e-47
AXU53350.1|1669921_1670347_+	phage protein	NA	A0A0A8WFV8	Clostridium_phage	96.5	8.0e-74
AXU53351.1|1670339_1670777_+	phage protein	NA	X5JAB5	Clostridium_phage	92.4	2.2e-74
AXU53352.1|1670769_1670946_+	hypothetical protein	NA	A0A0A8WFD8	Clostridium_phage	93.1	6.5e-22
AXU53353.1|1670947_1672258_+	phage protein	NA	X5JAJ1	Clostridium_phage	91.1	4.6e-229
AXU53354.1|1672275_1672746_+	phage protein	NA	A0A0A8WJ62	Clostridium_phage	89.1	7.2e-76
AXU53355.1|1672816_1673257_+	phage protein	NA	X5JAB6	Clostridium_phage	64.4	7.8e-48
AXU53356.1|1673331_1673451_+	phage protein	NA	NA	NA	NA	NA
AXU53357.1|1673599_1673761_+	hypothetical protein	NA	A0A0A8WFE0	Clostridium_phage	76.5	2.0e-06
AXU53358.1|1674395_1675169_+	hypothetical protein	NA	X5JB37	Clostridium_phage	37.5	7.1e-36
AXU53359.1|1675235_1677605_+|tail	phage tail tape measure protein	tail	X5JAB7	Clostridium_phage	70.1	9.0e-284
AXU53360.1|1677620_1678316_+	phage cell wall hydrolase	NA	X5J9Z8	Clostridium_phage	93.1	6.2e-116
AXU53361.1|1678308_1680264_+	phage cell wall hydrolase	NA	A0A0A8WIF2	Clostridium_phage	76.8	4.4e-268
AXU53362.1|1680277_1680538_+	phage protein	NA	A0A0A8WJ65	Clostridium_phage	87.2	4.9e-34
AXU53363.1|1680542_1680962_+	phage protein	NA	A0A0A8WFW6	Clostridium_phage	94.2	4.8e-71
AXU53364.1|1680962_1682012_+	phage protein	NA	A0A0A8WFK0	Clostridium_phage	96.0	7.0e-188
AXU53365.1|1682004_1682622_+	phage protein	NA	A0A0A8WII4	Clostridium_phage	89.8	2.2e-104
AXU53366.1|1682637_1683666_+|tail	phage tail fiber protein	tail	A0A0A8WIF4	Clostridium_phage	81.2	1.4e-127
AXU53367.1|1683679_1685158_+	hypothetical protein	NA	J9QE87	Clostridium_phage	69.7	2.8e-150
AXU53368.1|1685171_1685465_+	hypothetical protein	NA	A0A2R2ZGK0	Clostridioides_phage	79.4	7.0e-37
AXU53369.1|1685464_1685647_+	hypothetical protein	NA	A0A0K2SUB6	Clostridium_phage	91.7	1.2e-23
AXU53370.1|1685680_1685872_+	hypothetical protein	NA	A3QSB9	Clostridium_virus	93.7	1.3e-23
AXU53371.1|1685888_1687022_+	Ig domain-containing protein	NA	E2ELJ9	Clostridium_phage	46.0	3.2e-77
AXU53372.1|1687040_1687406_+	hypothetical protein	NA	E2ELK0	Clostridium_phage	98.3	1.1e-55
AXU53373.1|1687406_1687541_+	phage protein, XkdX family	NA	E2ELK1	Clostridium_phage	100.0	2.8e-17
AXU53374.1|1687755_1688340_+	hypothetical protein	NA	E2ELK5	Clostridium_phage	51.1	3.0e-23
AXU53375.1|1688364_1688658_+	hypothetical protein	NA	A0A2R2ZGK0	Clostridioides_phage	70.1	8.9e-32
AXU53376.1|1688657_1688822_+	hypothetical protein	NA	E2ELK4	Clostridium_phage	100.0	2.1e-22
AXU53377.1|1689019_1689631_+	hypothetical protein	NA	E2ELK5	Clostridium_phage	81.3	1.9e-89
AXU53378.1|1689642_1689951_+	hypothetical protein	NA	E2ELK6	Clostridium_phage	83.8	1.4e-43
AXU53379.1|1689950_1690133_+	hypothetical protein	NA	J9QDY8	Clostridium_phage	76.7	9.1e-19
AXU53380.1|1690173_1690404_+	Hemolysin XhlA	NA	A0A0A8WJM3	Clostridium_phage	51.3	5.9e-15
AXU53381.1|1690423_1690681_+|holin	holin	holin	A3QSC5	Clostridium_virus	100.0	1.1e-41
AXU53382.1|1690941_1691805_+	AbiF-like protein	NA	A3QSC6	Clostridium_virus	100.0	2.2e-163
AXU53383.1|1691883_1692696_+	N-acetylmuramoyl-l-alanine amidase	NA	X5JAJ5	Clostridium_phage	95.9	2.4e-151
AXU53384.1|1692852_1695144_+	penicillin-binding protein	NA	NA	NA	NA	NA
AXU53385.1|1695185_1695362_-	putative PemI	NA	A0A0A8WHQ4	Clostridium_phage	63.8	4.2e-13
AXU53386.1|1695599_1695728_-	hypothetical protein	NA	A0A0A8WEJ5	Clostridium_phage	95.2	5.8e-12
>prophage 5
CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4114585	2386330	2447258	4114585	protease,tRNA,transposase,integrase	Streptococcus_phage(46.15%)	52	2384650:2384667	2420783:2420800
2384650:2384667	attL	TACTATCTATAAATAATA	NA	NA	NA	NA
AXU54010.1|2386330_2387146_-|integrase	integrase	integrase	A0A1S5SEW7	Streptococcus_phage	62.4	7.1e-95
AXU54011.1|2387246_2387945_+	conjugative transposon protein	NA	A0A1S5SF64	Streptococcus_phage	84.5	4.9e-105
AXU54012.1|2388032_2388653_+	cAMP-binding regulatory protein	NA	NA	NA	NA	NA
AXU54013.1|2389331_2390258_+	hypothetical protein	NA	NA	NA	NA	NA
AXU54014.1|2390271_2390721_+	N-acetyltransferase GCN5	NA	NA	NA	NA	NA
AXU54015.1|2391080_2391488_+	conjugative transposon protein	NA	A0A1S5SEW0	Streptococcus_phage	26.7	1.7e-09
AXU54016.1|2391489_2391720_+	conjugative transposon protein	NA	NA	NA	NA	NA
AXU54017.1|2392109_2392313_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	74.6	4.4e-22
AXU54018.1|2392390_2392639_+|integrase	integrase	integrase	A0A1S5SEW7	Streptococcus_phage	79.0	3.9e-20
AXU54019.1|2392814_2393447_+	streptogramin A acetyltransferase	NA	A0A2R8FE91	Brazilian_cedratvirus	42.2	6.0e-25
AXU54020.1|2393816_2394686_-	radical SAM protein	NA	NA	NA	NA	NA
AXU54021.1|2394782_2395640_-	lysophospholipase	NA	NA	NA	NA	NA
AXU54022.1|2395854_2397873_-	membrane protein	NA	NA	NA	NA	NA
AXU54023.1|2398143_2398920_-	nitrite transporter	NA	NA	NA	NA	NA
AXU54024.1|2398976_2399948_-	anaerobic sulfite reductase subunit C	NA	NA	NA	NA	NA
AXU54025.1|2400079_2401189_-|transposase	transposase-like protein B	transposase	A0A0H3UZC2	Geobacillus_virus	53.5	7.3e-111
AXU54026.1|2401843_2402635_-	anaerobic sulfite reductase subunit B	NA	NA	NA	NA	NA
AXU54027.1|2402635_2403643_-	anaerobic sulfite reductase subunit A	NA	NA	NA	NA	NA
AXU54028.1|2404033_2404723_-	cAMP-binding regulatory protein	NA	NA	NA	NA	NA
AXU54029.1|2404785_2405634_-	transcriptional regulator	NA	NA	NA	NA	NA
AXU54030.1|2405652_2406540_-	glucokinase	NA	NA	NA	NA	NA
AXU54031.1|2406597_2407401_-	hypothetical protein	NA	A0A2I7QV58	Vibrio_phage	23.6	9.3e-07
AXU54032.1|2407560_2408013_-	beta-D-galactosidase	NA	NA	NA	NA	NA
AXU54033.1|2408142_2409645_-	sodium:solute symporter	NA	NA	NA	NA	NA
AXU54034.1|2409677_2410559_-	N-acetylneuraminate lyase	NA	NA	NA	NA	NA
AXU54035.1|2410628_2411300_-	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
AXU54036.1|2411572_2412064_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54037.1|2412085_2413450_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54038.1|2413868_2415044_+	signaling protein	NA	NA	NA	NA	NA
AXU54039.1|2415216_2416614_-|tRNA	asparaginyl-tRNA synthetase	tRNA	M1PB22	Moumouvirus	39.8	4.9e-88
AXU54040.1|2417092_2417287_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54041.1|2417576_2419250_-|protease	germination-specific protease	protease	NA	NA	NA	NA
AXU54042.1|2419259_2422610_-|protease	germination-specific protease	protease	A0A127AWU5	Bacillus_phage	32.3	2.5e-05
2420783:2420800	attR	TATTATTTATAGATAGTA	NA	NA	NA	NA
AXU54043.1|2422825_2424022_-	VWA domain containing CoxE-like protein	NA	NA	NA	NA	NA
AXU54044.1|2424042_2424864_-	ATPase	NA	NA	NA	NA	NA
AXU54045.1|2425327_2426422_+	permease	NA	NA	NA	NA	NA
AXU54046.1|2426572_2426929_+	hypothetical protein	NA	NA	NA	NA	NA
AXU54047.1|2427021_2428290_-	L-lysine 2,3-aminomutase	NA	NA	NA	NA	NA
AXU54048.1|2428691_2430074_-	GntR family transcriptional regulator	NA	A0A1X9I5H2	Streptococcus_phage	25.2	2.1e-14
AXU54049.1|2430202_2430889_+	amino acid recemase	NA	NA	NA	NA	NA
AXU54050.1|2431073_2432609_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54051.1|2432883_2433933_+	PTS system transporter subunit EIIC	NA	NA	NA	NA	NA
AXU54052.1|2433981_2435016_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54053.1|2435033_2435381_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AXU54054.1|2435638_2437021_+	proton-dependent oligopeptide transporter	NA	NA	NA	NA	NA
AXU54055.1|2437101_2438895_-	peptidase	NA	A0A0P0I8D7	Acinetobacter_phage	39.4	1.1e-127
AXU54056.1|2439147_2440539_-	proton-dependent oligopeptide transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.4	1.7e-56
AXU54057.1|2440992_2442135_-	protein export chaperone	NA	NA	NA	NA	NA
AXU54058.1|2442245_2443283_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54059.1|2443804_2444362_-	membrane-spanning protein	NA	NA	NA	NA	NA
AXU54060.1|2444389_2445916_-	oxidoreductase	NA	NA	NA	NA	NA
AXU54061.1|2446295_2447258_-|protease	membrane-associated caaX amino terminal protease	protease	NA	NA	NA	NA
>prophage 6
CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4114585	2481421	2487492	4114585	transposase	Clostridium_phage(71.43%)	10	NA	NA
AXU54090.1|2481421_2481817_-	prophage antirepressor-related protein	NA	X5JAW1	Clostridium_phage	91.5	2.9e-62
AXU54091.1|2481869_2482235_-	phage-related regulatory protein	NA	A0A2R2ZGW3	Clostridioides_phage	69.0	4.9e-40
AXU54092.1|2482355_2482508_-	hypothetical protein	NA	X5JAJ2	Clostridium_phage	57.1	2.1e-05
AXU54093.1|2483388_2484237_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54094.1|2484504_2484657_-	hypothetical protein	NA	J9QED5	Clostridium_phage	54.0	3.3e-06
AXU54095.1|2484930_2485263_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54096.1|2485289_2485544_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54097.1|2485692_2486124_-|transposase	transposase-like protein b	transposase	A0A0H3UZC2	Geobacillus_virus	63.7	9.0e-33
AXU54098.1|2486821_2487013_-	repressor	NA	A0A0A8WFF9	Clostridium_phage	68.9	1.9e-14
AXU54099.1|2487117_2487492_-	regulatory protein	NA	A0A0A8WJU1	Clostridium_phage	88.0	7.1e-50
>prophage 7
CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4114585	2728950	2762249	4114585	tail,terminase,capsid,portal	Clostridium_phage(94.12%)	43	NA	NA
AXU54320.1|2728950_2729244_-	hypothetical protein	NA	Q24LG2	Clostridium_phage	93.5	5.9e-44
AXU54321.1|2729335_2729863_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54322.1|2729925_2730771_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54323.1|2731060_2731858_-	phage-related cell wall hydrolase	NA	A0A0A8WIC2	Clostridium_phage	91.0	1.9e-140
AXU54324.1|2731857_2732124_-	hypothetical protein	NA	A0A1J1J9U0	Escherichia_phage	91.9	7.0e-36
AXU54325.1|2732187_2732358_-	hypothetical protein	NA	A0A0A8WHY8	Clostridium_phage	70.9	2.8e-14
AXU54326.1|2732369_2732717_-	hypothetical protein	NA	A3QSB8	Clostridium_virus	93.9	5.7e-54
AXU54327.1|2732732_2734370_-	Glycine rich protein	NA	J9QD15	Clostridium_phage	58.8	6.4e-95
AXU54328.1|2734383_2735190_-|tail	phage tail fiber protein	tail	X5JAJ4	Clostridium_phage	79.5	1.0e-101
AXU54329.1|2735205_2735823_-	phage protein	NA	A0A0A8WII4	Clostridium_phage	89.8	2.2e-104
AXU54330.1|2735815_2736865_-	phage protein	NA	A0A0A8WFK0	Clostridium_phage	97.4	1.2e-190
AXU54331.1|2736865_2737285_-	phage protein	NA	A0A0A8WFW6	Clostridium_phage	94.2	4.8e-71
AXU54332.1|2737289_2737550_-	phage protein	NA	A0A0A8WJ65	Clostridium_phage	87.2	4.9e-34
AXU54333.1|2737563_2739522_-	phage cell wall hydrolase	NA	A0A0A8WIF2	Clostridium_phage	81.7	1.1e-274
AXU54334.1|2739514_2740210_-	phage cell wall hydrolase	NA	X5J9Z8	Clostridium_phage	93.5	1.9e-117
AXU54335.1|2740221_2742459_-|tail	phage tail tape measure protein	tail	X5JAB7	Clostridium_phage	61.0	3.0e-236
AXU54336.1|2742455_2742572_-|tail	phage tail tape measure protein	tail	NA	NA	NA	NA
AXU54337.1|2742642_2743212_-	phage protein	NA	A0A0A8WFW4	Clostridium_phage	37.4	1.5e-27
AXU54338.1|2743255_2743816_-	phage lipoprotein	NA	NA	NA	NA	NA
AXU54339.1|2744621_2744798_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54340.1|2744860_2745679_-	prophage antirepressor-related protein	NA	X5JAW1	Clostridium_phage	73.3	4.2e-87
AXU54341.1|2745799_2745982_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54342.1|2747141_2747300_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54343.1|2747361_2748165_-	prophage antirepressor-related protein	NA	X5JAW1	Clostridium_phage	70.0	5.5e-76
AXU54344.1|2748293_2748464_-	Ribbon-helix-helix protein, copG family	NA	NA	NA	NA	NA
AXU54345.1|2748766_2749519_-	hypothetical protein	NA	A0A090DCP8	Clostridium_phage	51.6	8.0e-61
AXU54346.1|2750550_2750655_-	hypothetical protein	NA	A0A090D809	Clostridium_phage	73.5	1.9e-05
AXU54347.1|2751497_2751938_-	phage protein	NA	X5JAB6	Clostridium_phage	63.7	8.6e-47
AXU54348.1|2752009_2752480_-	phage protein	NA	A0A0A8WJ62	Clostridium_phage	82.1	7.0e-71
AXU54349.1|2752496_2753807_-	phage protein	NA	X5JAJ1	Clostridium_phage	93.3	8.9e-233
AXU54350.1|2753807_2753993_-	hypothetical protein	NA	A0A0A8WFD8	Clostridium_phage	91.4	3.4e-21
AXU54351.1|2753976_2754414_-	phage protein	NA	X5JAB5	Clostridium_phage	95.2	1.1e-75
AXU54352.1|2754406_2754832_-	phage protein	NA	A0A0A8WFV8	Clostridium_phage	96.5	8.0e-74
AXU54353.1|2754831_2755194_-	phage protein	NA	X5JAV9	Clostridium_phage	82.5	1.1e-47
AXU54354.1|2755187_2755589_-	hypothetical protein	NA	X5JAJ0	Clostridium_phage	97.7	1.2e-68
AXU54355.1|2755598_2755832_-	hypothetical protein	NA	A0A0A8WFD0	Clostridium_phage	97.4	1.4e-32
AXU54356.1|2755831_2756731_-|capsid	phage major capsid protein	capsid	A0A0A8WFI8	Clostridium_phage	99.3	5.3e-168
AXU54357.1|2756742_2757306_-	phage scaffold protein	NA	A0A0A8WFU8	Clostridium_phage	88.2	5.1e-84
AXU54358.1|2757373_2757622_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54359.1|2757623_2759159_-	phage protein	NA	A0A0A8WIE7	Clostridium_phage	95.6	2.1e-193
AXU54360.1|2759148_2760588_-|portal	phage portal protein	portal	X5J9Z4	Clostridium_phage	91.9	1.7e-261
AXU54361.1|2760592_2761843_-|terminase	phage terminase large subunit, pbsx family	terminase	A0A0A7RTE7	Clostridium_phage	83.0	9.8e-205
AXU54362.1|2761823_2762249_-	phage-like protein	NA	A0A090DCM3	Clostridium_phage	89.0	1.1e-62
>prophage 8
CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4114585	2765670	2780174	4114585		Clostridium_phage(75.0%)	33	NA	NA
AXU54368.1|2765670_2766159_-	DNA-binding protein	NA	A0A090EUN5	Clostridium_phage	100.0	6.1e-86
AXU54369.1|2766248_2767085_-	phage protein	NA	A0A0A8WJ22	Clostridium_phage	82.2	3.1e-122
AXU54370.1|2767431_2767806_+	hypothetical protein	NA	NA	NA	NA	NA
AXU54371.1|2768017_2768257_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54372.1|2768365_2768701_-	hypothetical protein	NA	A0A0A8WFN1	Clostridium_phage	97.3	4.2e-54
AXU54373.1|2768684_2768819_-	hypothetical protein	NA	A0A0A8WJ82	Clostridium_phage	100.0	1.8e-16
AXU54374.1|2768818_2769184_-	hypothetical protein	NA	A0A0A8WG34	Clostridium_phage	90.9	9.9e-57
AXU54375.1|2769197_2769455_-	hypothetical protein	NA	A0A0A8WJU8	Clostridium_phage	90.6	1.7e-34
AXU54376.1|2769472_2769604_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54377.1|2769631_2770006_-	hypothetical protein	NA	A0A2R2ZGN2	Clostridioides_phage	78.2	2.8e-46
AXU54378.1|2770075_2770888_-	phage replication protein	NA	A0A0A8WI94	Clostridium_phage	88.9	2.2e-08
AXU54379.1|2770902_2771163_-	phage recombination protein	NA	NA	NA	NA	NA
AXU54380.1|2771256_2771805_-	phage recombination protein	NA	A8ATK8	Listeria_phage	46.6	9.7e-40
AXU54381.1|2772140_2772386_-	hypothetical protein	NA	X5JAW8	Clostridium_phage	81.5	1.3e-28
AXU54382.1|2772375_2772558_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54383.1|2772690_2773020_-	phage DNA-binding protein	NA	A0A090D837	Clostridium_phage	82.6	1.1e-41
AXU54384.1|2773036_2773234_-	phage regulatory protein	NA	A0A0A8WJU5	Clostridium_phage	98.5	9.5e-30
AXU54385.1|2773302_2773536_+	hypothetical protein	NA	A0A0A8WJQ0	Clostridium_phage	84.4	2.0e-31
AXU54386.1|2773539_2773710_-	hypothetical protein	NA	A0A0A8WFJ6	Clostridium_phage	96.4	1.4e-26
AXU54387.1|2773775_2774408_-	prophage antirepressor	NA	X5JAJ8	Clostridium_phage	88.3	1.5e-105
AXU54388.1|2774397_2774583_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54389.1|2774778_2775129_+	putative prophage repressor	NA	NA	NA	NA	NA
AXU54390.1|2775195_2775363_+	Mnt	NA	A0A0A8WG21	Clostridium_phage	100.0	1.2e-22
AXU54391.1|2775374_2775512_-	hypothetical protein	NA	A0A0A8WJA6	Clostridium_phage	95.6	1.6e-15
AXU54392.1|2775568_2776357_-	phage anti-repressor	NA	B6SBX3	Clostridium_virus	98.1	5.2e-135
AXU54393.1|2776360_2776819_-	putative prophage LambdaCh01, transcriptional regulator	NA	A0A1L2BY71	Clostridium_phage	39.6	1.5e-17
AXU54394.1|2776863_2777055_-	DNA-binding protein	NA	A0A0K2CNP2	Brevibacillus_phage	49.2	2.4e-06
AXU54395.1|2777211_2777454_+	putative transcriptional regulator	NA	A0A0K2CNE2	Brevibacillus_phage	51.3	6.9e-14
AXU54396.1|2777649_2777799_-	DNA-binding protein	NA	NA	NA	NA	NA
AXU54397.1|2777863_2778184_+	phage regulatory protein	NA	A0A090D830	Clostridium_phage	41.4	7.0e-14
AXU54398.1|2778296_2778680_+	hypothetical protein	NA	A0A0A7RTI7	Clostridium_phage	71.2	1.2e-36
AXU54399.1|2778720_2778861_-	hypothetical protein	NA	NA	NA	NA	NA
AXU54400.1|2779274_2780174_-	cell surface protein	NA	A0A2R2ZGK6	Clostridioides_phage	52.3	1.1e-64
>prophage 9
CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4114585	3083054	3092007	4114585		Catovirus(50.0%)	8	NA	NA
AXU54646.1|3083054_3084968_-	capsular polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.8	1.1e-26
AXU54647.1|3085051_3086143_-	capsular polysaccharide biosynthesis glycosyl transferase	NA	A0A1V0SL50	Klosneuvirus	26.2	1.4e-16
AXU54648.1|3086148_3087444_-	UDP-glucose 6-dehydrogenase	NA	A0A127AXI2	Bacillus_phage	43.6	2.9e-90
AXU54649.1|3087469_3088222_-	teichuronic acid biosynthesis glycosyl transferase	NA	A0A1V0SAH6	Catovirus	40.5	4.6e-16
AXU54650.1|3088269_3089178_-	beta-glycosyltransferase	NA	NA	NA	NA	NA
AXU54651.1|3089199_3089949_-	teichuronic acid biosynthesis glycosyl transferase	NA	A0A1V0SAH6	Catovirus	38.8	1.2e-16
AXU54652.1|3089977_3091153_-	minor teichoic acid biosynthesis protein	NA	NA	NA	NA	NA
AXU54653.1|3091167_3092007_-	glycosyl transferase	NA	A0A2P1ELT8	Moumouvirus	26.3	7.0e-05
>prophage 10
CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4114585	3693855	3747215	4114585	protease	Agrobacterium_phage(22.22%)	50	NA	NA
AXU55135.1|3693855_3694935_-|protease	protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	25.7	3.3e-15
AXU55136.1|3695090_3696440_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
AXU55137.1|3696704_3698333_-	sodium-dependent phosphate transporter	NA	NA	NA	NA	NA
AXU55138.1|3698456_3700061_-	FAD-dependent dehydrogenase	NA	NA	NA	NA	NA
AXU55139.1|3700108_3700426_-	hypothetical protein	NA	NA	NA	NA	NA
AXU55140.1|3700430_3700796_-	hypothetical protein	NA	NA	NA	NA	NA
AXU55141.1|3700876_3701914_-	protein translocase	NA	NA	NA	NA	NA
AXU55142.1|3702166_3702751_-	hypothetical protein	NA	NA	NA	NA	NA
AXU55143.1|3702765_3703209_-	hypothetical protein	NA	NA	NA	NA	NA
AXU55144.1|3703209_3704082_-	fimbrial assembly protein	NA	NA	NA	NA	NA
AXU55145.1|3704134_3704494_-	type IV pilin	NA	NA	NA	NA	NA
AXU55146.1|3704547_3705633_-	type IV pilus-assembly protein	NA	NA	NA	NA	NA
AXU55147.1|3705803_3707153_-	type IV pilus-assembly protein	NA	NA	NA	NA	NA
AXU55148.1|3707175_3707856_-	membrane protein	NA	NA	NA	NA	NA
AXU55149.1|3708247_3709327_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
AXU55150.1|3709904_3711275_+	transporter	NA	NA	NA	NA	NA
AXU55151.1|3711539_3712151_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA	NA
AXU55152.1|3712140_3714504_-|protease	ATP-dependent protease La	protease	A0A0R6PGP8	Moraxella_phage	44.4	4.0e-175
AXU55153.1|3714683_3715196_+	chromate transport protein	NA	NA	NA	NA	NA
AXU55154.1|3715183_3715711_+	chromate transport protein	NA	NA	NA	NA	NA
AXU55155.1|3715781_3717032_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.1	6.1e-146
AXU55156.1|3717050_3717635_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	58.8	9.3e-57
AXU55157.1|3717784_3719071_-	trigger factor	NA	NA	NA	NA	NA
AXU55158.1|3719264_3719735_-	phosphoesterase	NA	NA	NA	NA	NA
AXU55159.1|3719734_3721084_-	ribonuclease PH	NA	NA	NA	NA	NA
AXU55160.1|3721243_3723268_-	DNA ligase	NA	A0A0K2QQN8	Ralstonia_phage	37.6	3.8e-113
AXU55161.1|3723453_3724392_-	D-isomer specific 2-hydroxyacid dehydrogenase	NA	NA	NA	NA	NA
AXU55162.1|3724493_3724916_-	hypothetical protein	NA	NA	NA	NA	NA
AXU55163.1|3725103_3726387_+	transporter	NA	NA	NA	NA	NA
AXU55164.1|3726464_3726980_-	electron transport protein	NA	NA	NA	NA	NA
AXU55165.1|3726979_3728356_-	hydrogenase	NA	NA	NA	NA	NA
AXU55166.1|3728380_3728932_-	electron transport protein	NA	NA	NA	NA	NA
AXU55167.1|3728989_3729205_-	hypothetical protein	NA	NA	NA	NA	NA
AXU55168.1|3729173_3730007_-	formate dehydrogenase accessory protein	NA	NA	NA	NA	NA
AXU55169.1|3732450_3733509_-	ABC transporter permease	NA	NA	NA	NA	NA
AXU55170.1|3733719_3734379_-	two-component response regulator	NA	W8CYM9	Bacillus_phage	33.6	4.2e-29
AXU55171.1|3734684_3735314_+	hypothetical protein	NA	NA	NA	NA	NA
AXU55172.1|3735340_3735979_+	hypothetical protein	NA	NA	NA	NA	NA
AXU55173.1|3736084_3736660_-	hypothetical protein	NA	NA	NA	NA	NA
AXU55174.1|3736952_3737231_-	Mor transcription activator domain-containing protein	NA	NA	NA	NA	NA
AXU55175.1|3737539_3738301_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
AXU55176.1|3738469_3740530_-	exosporium glycoprotein	NA	A0A285PXU9	Cedratvirus	64.7	1.4e-38
AXU55177.1|3740608_3741685_-	glycosyl transferase	NA	A0A1V0SAJ8	Catovirus	25.3	1.3e-16
AXU55178.1|3741996_3742581_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	51.3	3.6e-48
AXU55179.1|3742577_3743060_-	AraC family transcription regulator	NA	NA	NA	NA	NA
AXU55180.1|3743258_3744674_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AXU55181.1|3744788_3745457_+	B3/4 domain protein	NA	NA	NA	NA	NA
AXU55182.1|3745632_3746151_-	nitroreductase	NA	NA	NA	NA	NA
AXU55183.1|3746302_3746626_+	transcriptional regulator	NA	NA	NA	NA	NA
AXU55184.1|3746630_3747215_-|protease	protease	protease	NA	NA	NA	NA
>prophage 11
CP016106	Clostridioides difficile strain DSM 29637 chromosome, complete genome	4114585	3768825	3790842	4114585		Streptococcus_phage(76.92%)	18	NA	NA
AXU55203.1|3768825_3771591_-	magnesium transporting ATPase, P-type	NA	M1HJQ2	Paramecium_bursaria_Chlorella_virus	25.6	5.8e-48
AXU55204.1|3771756_3772068_-	hypothetical protein	NA	NA	NA	NA	NA
AXU55205.1|3772314_3772992_-	magnesium transporting ATPase protein C	NA	G3MA03	Bacillus_virus	36.0	3.3e-13
AXU55206.1|3773129_3773633_-	transcriptional regulator	NA	NA	NA	NA	NA
AXU55207.1|3773648_3776312_-	magnesium transporting ATPase, P-type 1	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	24.8	1.8e-38
AXU55208.1|3777097_3778000_-	conjugative transposon protein	NA	A0A1S5SF22	Streptococcus_phage	52.3	5.8e-82
AXU55209.1|3778016_3779024_-	cell wall hydrolase	NA	A0A1S5SEZ8	Streptococcus_phage	69.3	3.6e-133
AXU55210.1|3779020_3781225_-	conjugative transposon protein	NA	A0A1S5SF30	Streptococcus_phage	51.3	2.4e-182
AXU55211.1|3781224_3783675_-	conjugative transposon protein	NA	A0A1S5SF64	Streptococcus_phage	76.2	0.0e+00
AXU55212.1|3784168_3784672_-	conjugative transposon protein	NA	A0A1S5SF25	Streptococcus_phage	60.2	4.4e-55
AXU55213.1|3784689_3785193_-	conjugative tansposon protein	NA	NA	NA	NA	NA
AXU55214.1|3785506_3786259_-	hypothetical protein	NA	NA	NA	NA	NA
AXU55215.1|3786339_3786561_-	conjugative transposon protein	NA	A0A1S5SEY0	Streptococcus_phage	87.7	9.0e-29
AXU55216.1|3786561_3786696_-	conjugative transposon protein	NA	NA	NA	NA	NA
AXU55217.1|3786708_3787905_-	conjugative transposon replication initiation factor	NA	A0A1S5SEX3	Streptococcus_phage	61.8	1.4e-147
AXU55218.1|3788089_3789484_-	conjugative transposon FtsK/SpoIIIE-like protein	NA	A0A1S5SFB5	Streptococcus_phage	65.3	1.0e-173
AXU55219.1|3790116_3790500_-	conjugative transposon protein	NA	A0A1S5SF96	Streptococcus_phage	57.0	6.8e-32
AXU55220.1|3790515_3790842_-	conjugative transposon protein	NA	A0A1S5SF38	Streptococcus_phage	52.4	4.0e-25
