assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	1	342984-343083	1	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	TGCCGGTCACCGATGGCCTCAAGCGCCGGCCGGGCT	36	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|68aa|up_9|CP031742.1_333775_333979_-,NA|321aa|up_4|CP031742.1_336428_337391_+,NA|97aa|down_1|CP031742.1_345183_345474_-,NA|199aa|down_6|CP031742.1_350169_350766_-	NA|68aa|up_9|CP031742.1_333775_333979_-	NA	NA|57aa|up_8|CP031742.1_334173_334344_+	PRK01110, rpmF, 50S ribosomal protein L32; Validated	NA|294aa|up_7|CP031742.1_334399_335281_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|202aa|up_6|CP031742.1_335388_335994_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|114aa|up_5|CP031742.1_336090_336432_+	pfam03551, PadR, Transcriptional regulator PadR-like family	NA|321aa|up_4|CP031742.1_336428_337391_+	NA	NA|307aa|up_3|CP031742.1_337403_338324_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|316aa|up_2|CP031742.1_338351_339299_+	cd00311, TIM, Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate	NA|249aa|up_1|CP031742.1_339412_340159_+	cd00311, TIM, Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate	NA|475aa|up_0|CP031742.1_341438_342863_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|646aa|down_0|CP031742.1_343169_345107_-	smart00065, GAF, Domain present in phytochromes and cGMP-specific phosphodiesterases	NA|97aa|down_1|CP031742.1_345183_345474_-	NA	NA|267aa|down_2|CP031742.1_345458_346259_-	TIGR01963, D-beta-hydroxybutyrate_dehydrogenase, 3-hydroxybutyrate dehydrogenase	NA|180aa|down_3|CP031742.1_346366_346906_-	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|540aa|down_4|CP031742.1_346983_348603_-	COG0815, Lnt, Apolipoprotein N-acyltransferase [Cell envelope biogenesis, outer membrane]	NA|479aa|down_5|CP031742.1_348662_350099_-	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|199aa|down_6|CP031742.1_350169_350766_-	NA	NA|262aa|down_7|CP031742.1_350826_351612_-	PRK00865, PRK00865, glutamate racemase; Provisional	NA|397aa|down_8|CP031742.1_351702_352893_-	COG4110, COG4110, Uncharacterized protein involved in stress response [General function prediction only]	NA|172aa|down_9|CP031742.1_353227_353743_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	2	369266-369381	2	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	ACCGGCACCCCCAGTCGCGGCGCAGCCACACCCCGGCCGGCG	42	1	1	369308-369339	CP031742.1_3124870-3124839	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|813aa|up_9|CP031742.1_357893_360332_-,NA|107aa|up_6|CP031742.1_362879_363200_+,NA|181aa|up_0|CP031742.1_368619_369162_+,NA|226aa|down_0|CP031742.1_369472_370150_-	NA|813aa|up_9|CP031742.1_357893_360332_-	NA	NA|269aa|up_8|CP031742.1_360600_361407_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|379aa|up_7|CP031742.1_361419_362556_-	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism]	NA|107aa|up_6|CP031742.1_362879_363200_+	NA	NA|179aa|up_5|CP031742.1_363436_363973_+	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|413aa|up_4|CP031742.1_364055_365294_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|220aa|up_3|CP031742.1_365345_366005_-	pfam13532, 2OG-FeII_Oxy_2, 2OG-Fe(II) oxygenase superfamily	NA|406aa|up_2|CP031742.1_366136_367354_+	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters	NA|402aa|up_1|CP031742.1_367422_368627_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|181aa|up_0|CP031742.1_368619_369162_+	NA	NA|226aa|down_0|CP031742.1_369472_370150_-	NA	NA|374aa|down_1|CP031742.1_370331_371453_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|227aa|down_2|CP031742.1_371449_372130_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|408aa|down_3|CP031742.1_372407_373631_-	TIGR02032, Uncharacterized_protein_MJ1520, geranylgeranyl reductase family	NA|456aa|down_4|CP031742.1_373791_375159_+	PRK07907, PRK07907, hypothetical protein; Provisional	NA|327aa|down_5|CP031742.1_375230_376211_-	cd01562, Thr-dehyd, Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen	NA|341aa|down_6|CP031742.1_376336_377359_-	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|324aa|down_7|CP031742.1_377561_378533_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|347aa|down_8|CP031742.1_378788_379829_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|173aa|down_9|CP031742.1_379835_380354_-	pfam04978, DUF664, Protein of unknown function (DUF664)
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	3	1110820-1110904	3	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	CAGCCCGGCCGGCGCATGAGGCCA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|79aa|up_5|CP031742.1_1104783_1105020_-,NA|74aa|up_2|CP031742.1_1107843_1108065_+,NA	NA|269aa|up_9|CP031742.1_1101348_1102155_-	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|142aa|up_8|CP031742.1_1102222_1102648_-	PLN02772, PLN02772, guanylate kinase	NA|466aa|up_7|CP031742.1_1102835_1104233_+	PRK07818, PRK07818, dihydrolipoamide dehydrogenase; Reviewed	NA|139aa|up_6|CP031742.1_1104370_1104787_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|79aa|up_5|CP031742.1_1104783_1105020_-	NA	NA|280aa|up_4|CP031742.1_1105543_1106383_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|429aa|up_3|CP031742.1_1106379_1107666_+	pfam05231, MASE1, MASE1	NA|74aa|up_2|CP031742.1_1107843_1108065_+	NA	NA|195aa|up_1|CP031742.1_1108132_1108717_-	PRK12519, PRK12519, RNA polymerase sigma factor; Provisional	NA|334aa|up_0|CP031742.1_1108857_1109859_+	cd01104, HTH_MlrA-CarA, Helix-Turn-Helix DNA binding domain of the transcription regulators MlrA and CarA	NA|458aa|down_0|CP031742.1_1110981_1112355_-	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair]	NA|525aa|down_1|CP031742.1_1112387_1113962_-	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	NA|709aa|down_2|CP031742.1_1114950_1117077_+	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|351aa|down_3|CP031742.1_1117387_1118440_+	cd01148, TroA_a, Metal binding protein TroA_a	NA|354aa|down_4|CP031742.1_1118436_1119498_+	TIGR03869, transport_system_permease_protein, proposed F420-0 ABC transporter, permease protein	NA|268aa|down_5|CP031742.1_1119494_1120298_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|1634aa|down_6|CP031742.1_1121663_1126565_-	pfam12458, DUF3686, ATPase involved in DNA repair	NA|700aa|down_7|CP031742.1_1126927_1129027_-	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown]	NA|205aa|down_8|CP031742.1_1129391_1130006_-	pfam07290, DUF1449, Protein of unknown function (DUF1449)	NA|356aa|down_9|CP031742.1_1130315_1131383_+	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms]
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	4	1120300-1120385	4	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	TGGCCTCAAGCGCCGGCCGGGCT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|74aa|up_9|CP031742.1_1107843_1108065_+,NA|61aa|down_7|CP031742.1_1134089_1134272_-	NA|74aa|up_9|CP031742.1_1107843_1108065_+	NA	NA|195aa|up_8|CP031742.1_1108132_1108717_-	PRK12519, PRK12519, RNA polymerase sigma factor; Provisional	NA|334aa|up_7|CP031742.1_1108857_1109859_+	cd01104, HTH_MlrA-CarA, Helix-Turn-Helix DNA binding domain of the transcription regulators MlrA and CarA	NA|279aa|up_6|CP031742.1_1110001_1110838_+	cd01107, HTH_BmrR, Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator	NA|458aa|up_5|CP031742.1_1110981_1112355_-	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair]	NA|525aa|up_4|CP031742.1_1112387_1113962_-	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	NA|709aa|up_3|CP031742.1_1114950_1117077_+	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|351aa|up_2|CP031742.1_1117387_1118440_+	cd01148, TroA_a, Metal binding protein TroA_a	NA|354aa|up_1|CP031742.1_1118436_1119498_+	TIGR03869, transport_system_permease_protein, proposed F420-0 ABC transporter, permease protein	NA|268aa|up_0|CP031742.1_1119494_1120298_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|1634aa|down_0|CP031742.1_1121663_1126565_-	pfam12458, DUF3686, ATPase involved in DNA repair	NA|700aa|down_1|CP031742.1_1126927_1129027_-	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown]	NA|205aa|down_2|CP031742.1_1129391_1130006_-	pfam07290, DUF1449, Protein of unknown function (DUF1449)	NA|356aa|down_3|CP031742.1_1130315_1131383_+	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms]	NA|334aa|down_4|CP031742.1_1131470_1132472_+	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2	NA|307aa|down_5|CP031742.1_1132691_1133612_+	PRK09485, mmuM, homocysteine methyltransferase; Provisional	NA|133aa|down_6|CP031742.1_1133676_1134075_+	cd07235, MRD, Mitomycin C resistance protein (MRD)	NA|61aa|down_7|CP031742.1_1134089_1134272_-	NA	NA|386aa|down_8|CP031742.1_1134268_1135426_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|328aa|down_9|CP031742.1_1135480_1136464_-	pfam00665, rve, Integrase core domain
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	5	1179238-1179386	5	CRISPRCasFinder	no	DEDDh	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Unclear	AGCCCGGCCGGCGATTGAGGCCA	23	0	0	NA	NA	NA	2	2	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|208aa|up_9|CP031742.1_1165471_1166095_+,NA|790aa|down_3|CP031742.1_1182577_1184947_+,NA|106aa|down_5|CP031742.1_1191327_1191645_+,NA|186aa|down_8|CP031742.1_1193933_1194491_-	NA|208aa|up_9|CP031742.1_1165471_1166095_+	NA	NA|376aa|up_8|CP031742.1_1166579_1167707_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|143aa|up_7|CP031742.1_1167873_1168302_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|355aa|up_6|CP031742.1_1168415_1169480_+	TIGR03062, hypothetical_protein_lp_1332, YhgE/Pip C-terminal domain	NA|287aa|up_5|CP031742.1_1169602_1170463_+	pfam01636, APH, Phosphotransferase enzyme family	DEDDh|238aa|up_4|CP031742.1_1170488_1171202_-	PRK07942, PRK07942, DNA polymerase III subunit epsilon; Provisional	NA|414aa|up_3|CP031742.1_1171328_1172570_-	pfam18725, HEPN_SAV2148, SAV2148-like HEPN	NA|716aa|up_2|CP031742.1_1172864_1175012_+	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|828aa|up_1|CP031742.1_1175103_1177587_+	cd11336, AmyAc_MTSase, Alpha amylase catalytic domain found in maltooligosyl trehalose synthase (MTSase)	NA|429aa|up_0|CP031742.1_1177770_1179057_+	cd06904, M14_MpaA-like, Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A and related proteins	NA|184aa|down_0|CP031742.1_1179411_1179963_-	pfam00498, FHA, FHA domain	NA|589aa|down_1|CP031742.1_1180221_1181988_+	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase	NA|160aa|down_2|CP031742.1_1181984_1182464_+	cd04663, Nudix_Hydrolase_6, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|790aa|down_3|CP031742.1_1182577_1184947_+	NA	NA|249aa|down_4|CP031742.1_1185208_1185955_-	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase and Choline Kinase family	NA|106aa|down_5|CP031742.1_1191327_1191645_+	NA	NA|136aa|down_6|CP031742.1_1191945_1192353_-	pfam01641, SelR, SelR domain	NA|468aa|down_7|CP031742.1_1192366_1193770_-	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional	NA|186aa|down_8|CP031742.1_1193933_1194491_-	NA	NA|261aa|down_9|CP031742.1_1194611_1195394_-	PRK14059, PRK14059, pyrimidine reductase family protein
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	6	1596287-1596682	6,1,1	CRISPRCasFinder,CRT,PILER-CR	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	GGGTCCACCCCCGCGCGTGCAGGGAGCAG,GGGTCCACCCCCGCGCGTGCAGGGAGCAG,GGGTCCACCCCCGCGCGTGCAGGGAGCAG	29,29,29	0	0	NA	NA	NA:NA:NA	6,6,5	6	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|200aa|up_2|CP031742.1_1591725_1592325_-,NA	NA|425aa|up_9|CP031742.1_1583341_1584616_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|450aa|up_8|CP031742.1_1584542_1585892_+	pfam04030, ALO, D-arabinono-1,4-lactone oxidase	NA|373aa|up_7|CP031742.1_1585911_1587030_-	PHA03307, PHA03307, transcriptional regulator ICP4; Provisional	NA|345aa|up_6|CP031742.1_1587508_1588543_+	pfam11268, DUF3071, Protein of unknown function (DUF3071)	NA|276aa|up_5|CP031742.1_1588615_1589443_-	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|273aa|up_4|CP031742.1_1589683_1590502_+	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains	NA|394aa|up_3|CP031742.1_1590544_1591726_-	pfam01663, Phosphodiest, Type I phosphodiesterase / nucleotide pyrophosphatase	NA|200aa|up_2|CP031742.1_1591725_1592325_-	NA	NA|961aa|up_1|CP031742.1_1592386_1595269_-	TIGR02717, Uncharacterized_protein_MJ0590, acetyl coenzyme A synthetase (ADP forming), alpha domain	NA|94aa|up_0|CP031742.1_1595416_1595698_+	TIGR01003, Phosphocarrier_protein_HPr, Phosphotransferase System HPr (HPr) Family	NA|229aa|down_0|CP031742.1_1597884_1598571_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|258aa|down_1|CP031742.1_1598792_1599566_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|464aa|down_2|CP031742.1_1599977_1601369_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|455aa|down_3|CP031742.1_1601361_1602726_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|816aa|down_4|CP031742.1_1602923_1605371_+	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|373aa|down_5|CP031742.1_1605453_1606572_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|532aa|down_6|CP031742.1_1606683_1608279_-	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	NA|292aa|down_7|CP031742.1_1608316_1609192_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|323aa|down_8|CP031742.1_1609202_1610171_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|470aa|down_9|CP031742.1_1610173_1611583_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	8	1968942-1969045	8	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	CCCCAGCCCGGCCGGCGCTTGAGGCC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|104aa|up_6|CP031742.1_1961657_1961969_+,NA|206aa|up_5|CP031742.1_1962053_1962671_-,NA|80aa|up_2|CP031742.1_1966763_1967003_-,NA	NA|336aa|up_9|CP031742.1_1955247_1956255_+	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR)	NA|374aa|up_8|CP031742.1_1956537_1957659_+	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|1052aa|up_7|CP031742.1_1957991_1961147_-	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|104aa|up_6|CP031742.1_1961657_1961969_+	NA	NA|206aa|up_5|CP031742.1_1962053_1962671_-	NA	NA|745aa|up_4|CP031742.1_1962706_1964941_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|503aa|up_3|CP031742.1_1965237_1966746_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|80aa|up_2|CP031742.1_1966763_1967003_-	NA	NA|499aa|up_1|CP031742.1_1966999_1968496_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|99aa|up_0|CP031742.1_1968501_1968798_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|723aa|down_0|CP031742.1_1969106_1971275_-	cd01948, EAL, EAL domain	NA|729aa|down_1|CP031742.1_1971502_1973689_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|338aa|down_2|CP031742.1_1973709_1974723_-	cd03310, CIMS_like, CIMS - Cobalamine-independent methonine synthase, or MetE	NA|233aa|down_3|CP031742.1_1974803_1975502_-	PRK08219, PRK08219, SDR family oxidoreductase	NA|183aa|down_4|CP031742.1_1975527_1976076_-	pfam03641, Lysine_decarbox, Possible lysine decarboxylase	NA|121aa|down_5|CP031742.1_1976161_1976524_+	pfam04248, NTP_transf_9, Domain of unknown function (DUF427)	NA|259aa|down_6|CP031742.1_1976579_1977356_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|382aa|down_7|CP031742.1_1977400_1978546_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|245aa|down_8|CP031742.1_1978607_1979342_+	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase	NA|390aa|down_9|CP031742.1_1979364_1980534_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	9	2203109-2203246	9	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	TGGCCTCAAGCGCCGGCCGGGCT	23	0	0	NA	NA	NA	2	2	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA,NA|88aa|down_1|CP031742.1_2204862_2205126_+,NA|198aa|down_3|CP031742.1_2206676_2207270_+,NA|284aa|down_9|CP031742.1_2213452_2214304_+	NA|299aa|up_9|CP031742.1_2192166_2193063_-	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily	NA|268aa|up_8|CP031742.1_2193583_2194387_+	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]	NA|293aa|up_7|CP031742.1_2194383_2195262_+	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|265aa|up_6|CP031742.1_2195330_2196125_+	pfam12147, Methyltransf_20, Putative methyltransferase	NA|372aa|up_5|CP031742.1_2196146_2197262_-	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku	NA|302aa|up_4|CP031742.1_2197335_2198241_+	cd04863, MtLigD_Pol_like, MtLigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Mycobacterium tuberculosis (Mt)LigD	NA|126aa|up_3|CP031742.1_2198405_2198783_+	pfam08239, SH3_3, Bacterial SH3 domain	NA|466aa|up_2|CP031742.1_2198936_2200334_+	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|486aa|up_1|CP031742.1_2200330_2201788_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|369aa|up_0|CP031742.1_2201828_2202935_-	cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins	NA|385aa|down_0|CP031742.1_2203546_2204701_-	pfam18845, baeRF_family3, Bacterial archaeo-eukaryotic release factor family 3	NA|88aa|down_1|CP031742.1_2204862_2205126_+	NA	NA|362aa|down_2|CP031742.1_2205301_2206387_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|198aa|down_3|CP031742.1_2206676_2207270_+	NA	NA|415aa|down_4|CP031742.1_2207340_2208585_-	pfam17885, Smoa_sbd, Styrene monooxygenase A putative substrate binding domain	NA|209aa|down_5|CP031742.1_2208642_2209269_-	COG2229, COG2229, Predicted GTPase [General function prediction only]	NA|134aa|down_6|CP031742.1_2209249_2209651_-	pfam05331, DUF742, Protein of unknown function (DUF742)	NA|167aa|down_7|CP031742.1_2209647_2210148_-	smart00960, Robl_LC7, Roadblock/LC7 domain	NA|992aa|down_8|CP031742.1_2210144_2213120_-	cd00075, HATPase, Histidine kinase-like ATPase domain	NA|284aa|down_9|CP031742.1_2213452_2214304_+	NA
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	10	2283710-2283884	2	PILER-CR	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	CGTGCCGCTTCAAGATGGCCTCAAGCGCCGGCCGGGCTGGAT	42	0	0	NA	NA	NA	2	2	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|142aa|up_3|CP031742.1_2279883_2280309_-,NA	NA|198aa|up_9|CP031742.1_2274604_2275198_+	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase	NA|327aa|up_8|CP031742.1_2275229_2276210_+	COG2515, Acd, 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]	NA|532aa|up_7|CP031742.1_2276213_2277809_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|87aa|up_6|CP031742.1_2277887_2278148_+	pfam02148, zf-UBP, Zn-finger in ubiquitin-hydrolases and other protein	NA|138aa|up_5|CP031742.1_2278366_2278780_+	PRK04069, PRK04069, serine-protein kinase RsbW; Provisional	NA|288aa|up_4|CP031742.1_2279010_2279874_+	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily	NA|142aa|up_3|CP031742.1_2279883_2280309_-	NA	NA|323aa|up_2|CP031742.1_2280408_2281377_+	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|86aa|up_1|CP031742.1_2281695_2281953_+	pfam02467, Whib, Transcription factor WhiB	NA|489aa|up_0|CP031742.1_2282153_2283620_-	pfam12282, H_kinase_N, Signal transduction histidine kinase	NA|261aa|down_0|CP031742.1_2284314_2285097_+	PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional	NA|498aa|down_1|CP031742.1_2285246_2286740_-	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|300aa|down_2|CP031742.1_2286745_2287645_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|336aa|down_3|CP031742.1_2287641_2288649_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|433aa|down_4|CP031742.1_2288740_2290039_-	cd14747, PBP2_MalE, Maltose-binding protein MalE; possesses type 2 periplasmic binding fold	NA|235aa|down_5|CP031742.1_2290409_2291114_+	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|745aa|down_6|CP031742.1_2291615_2293850_+	PRK15015, PRK15015, carbon starvation protein CstA	NA|81aa|down_7|CP031742.1_2293846_2294089_+	pfam04328, Sel_put, Selenoprotein, putative	NA|792aa|down_8|CP031742.1_2294704_2297080_+	TIGR02506, Ribonucleoside-diphosphate_reductase_large_subunit, ribonucleoside-diphosphate reductase, alpha subunit	NA|351aa|down_9|CP031742.1_2297079_2298132_+	cd01049, RNRR2, Ribonucleotide Reductase, R2/beta subunit, ferritin-like diiron-binding domain
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	11	2469521-2469720	2	CRT	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	AGCCCGGCCGGCGCTTGAGGCCC	23	0	0	NA	NA	NA	3	3	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|402aa|up_7|CP031742.1_2458385_2459591_+,NA|556aa|up_6|CP031742.1_2459581_2461249_+,NA|115aa|up_4|CP031742.1_2463036_2463381_+,NA|208aa|up_3|CP031742.1_2463627_2464251_+,NA	NA|923aa|up_9|CP031742.1_2454356_2457125_+	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	NA|173aa|up_8|CP031742.1_2457789_2458308_+	pfam14435, SUKH-4, SUKH-4 immunity protein	NA|402aa|up_7|CP031742.1_2458385_2459591_+	NA	NA|556aa|up_6|CP031742.1_2459581_2461249_+	NA	NA|458aa|up_5|CP031742.1_2461361_2462735_+	cd18041, DEXXQc_DNA2, DEXXQ-box helicase domain of DNA2	NA|115aa|up_4|CP031742.1_2463036_2463381_+	NA	NA|208aa|up_3|CP031742.1_2463627_2464251_+	NA	NA|437aa|up_2|CP031742.1_2464393_2465704_-	TIGR03296, hypothetical_protein, M6 family metalloprotease domain	NA|647aa|up_1|CP031742.1_2466066_2468007_+	cd01948, EAL, EAL domain	NA|204aa|up_0|CP031742.1_2468020_2468632_-	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal	NA|362aa|down_0|CP031742.1_2469785_2470871_-	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|244aa|down_1|CP031742.1_2470970_2471702_-	COG3473, COG3473, Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|280aa|down_2|CP031742.1_2471872_2472712_-	COG3473, COG3473, Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|335aa|down_3|CP031742.1_2472985_2473990_+	cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase	NA|496aa|down_4|CP031742.1_2474108_2475596_+	PRK06169, PRK06169, putative amidase; Provisional	NA|168aa|down_5|CP031742.1_2475702_2476206_-	pfam12903, DUF3830, Protein of unknown function (DUF3830)	NA|294aa|down_6|CP031742.1_2476302_2477184_+	cd01002, PBP2_Ehub_like, Substrate binding domain of ectoine/hydroxyectoine specific ABC transport system; the type 2 periplasmic binding protein fold	NA|246aa|down_7|CP031742.1_2477180_2477918_+	TIGR03004, ectoine_ehuC, ectoine/hydroxyectoine ABC transporter, permease protein EhuC	NA|217aa|down_8|CP031742.1_2477914_2478565_+	TIGR03003, ectoine_ehuD, ectoine/hydroxyectoine ABC transporter, permease protein EhuD	NA|272aa|down_9|CP031742.1_2478554_2479370_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	12	2524841-2524927	10	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	TGGCCTCAAGCGCCGGCCGGGCT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA,NA|282aa|down_4|CP031742.1_2528135_2528981_-	NA|337aa|up_9|CP031742.1_2514888_2515899_-	cd03267, ABC_NatA_like, ATP-binding cassette domain of an uncharacterized transporter similar in sequence to NatA	NA|290aa|up_8|CP031742.1_2515947_2516817_-	pfam06182, ABC2_membrane_6, ABC-2 family transporter protein	NA|274aa|up_7|CP031742.1_2516809_2517631_-	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|774aa|up_6|CP031742.1_2517853_2520175_+	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|107aa|up_5|CP031742.1_2520238_2520559_-	PRK11431, PRK11431, quaternary ammonium compound efflux SMR transporter SugE	NA|101aa|up_4|CP031742.1_2520722_2521025_-	smart00883, Cpn10, Chaperonin 10 Kd subunit	NA|118aa|up_3|CP031742.1_2521139_2521493_-	pfam12277, DUF3618, Protein of unknown function (DUF3618)	NA|156aa|up_2|CP031742.1_2521640_2522108_+	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|500aa|up_1|CP031742.1_2522281_2523781_+	cd17366, MFS_ProP, Proline/betaine transporter of the Major Facilitator Superfamily of transporters	NA|201aa|up_0|CP031742.1_2524209_2524812_-	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|128aa|down_0|CP031742.1_2525065_2525449_-	COG5074, COG5074, t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion]	NA|242aa|down_1|CP031742.1_2525581_2526307_-	PRK00173, rph, ribonuclease PH; Reviewed	NA|78aa|down_2|CP031742.1_2526418_2526652_-	cd00212, PTS_IIB_glc, PTS_IIB, PTS system, glucose/sucrose specific IIB subunit	NA|429aa|down_3|CP031742.1_2526819_2528106_+	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component	NA|282aa|down_4|CP031742.1_2528135_2528981_-	NA	NA|250aa|down_5|CP031742.1_2529194_2529944_-	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|317aa|down_6|CP031742.1_2530228_2531179_-	TIGR01136, Cysteine_synthase, cysteine synthase	NA|95aa|down_7|CP031742.1_2531178_2531463_-	cd17074, Ubl_CysO_like, ubiquitin-like (Ubl) domain found in Mycobacterium tuberculosis CysO and similar proteins	NA|145aa|down_8|CP031742.1_2531854_2532289_-	cd08070, MPN_like, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding)	NA|482aa|down_9|CP031742.1_2532389_2533835_-	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	13	2772436-2772529	11	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	CACCTCAGCCCAATCCCCAGCCCGGCCGGCG	31	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|270aa|up_9|CP031742.1_2763401_2764211_+,NA|125aa|up_7|CP031742.1_2764815_2765190_+,NA|180aa|up_6|CP031742.1_2765232_2765772_-,NA|268aa|down_1|CP031742.1_2774225_2775029_+,NA|104aa|down_2|CP031742.1_2775110_2775422_-,NA|87aa|down_4|CP031742.1_2776706_2776967_-	NA|270aa|up_9|CP031742.1_2763401_2764211_+	NA	NA|170aa|up_8|CP031742.1_2764249_2764759_+	COG2018, COG2018, Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only]	NA|125aa|up_7|CP031742.1_2764815_2765190_+	NA	NA|180aa|up_6|CP031742.1_2765232_2765772_-	NA	NA|278aa|up_5|CP031742.1_2765917_2766751_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|203aa|up_4|CP031742.1_2766959_2767568_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|267aa|up_3|CP031742.1_2767570_2768371_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|329aa|up_2|CP031742.1_2768367_2769354_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|466aa|up_1|CP031742.1_2769809_2771207_-	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|347aa|up_0|CP031742.1_2771378_2772419_+	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|407aa|down_0|CP031742.1_2772677_2773898_+	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|268aa|down_1|CP031742.1_2774225_2775029_+	NA	NA|104aa|down_2|CP031742.1_2775110_2775422_-	NA	NA|305aa|down_3|CP031742.1_2775514_2776429_-	pfam12811, BaxI_1, Bax inhibitor 1 like	NA|87aa|down_4|CP031742.1_2776706_2776967_-	NA	NA|89aa|down_5|CP031742.1_2777017_2777284_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|265aa|down_6|CP031742.1_2777293_2778088_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|328aa|down_7|CP031742.1_2778189_2779173_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|205aa|down_8|CP031742.1_2779356_2779971_+	pfam04229, GrpB, GrpB protein	NA|258aa|down_9|CP031742.1_2780729_2781503_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	14	2897321-2897441	12	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	CAGCCCGGCCGGCGCTTGAGGCCATCAGTGACC	33	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|158aa|up_8|CP031742.1_2888610_2889084_+,NA|62aa|up_4|CP031742.1_2893613_2893799_-,NA|65aa|down_5|CP031742.1_2906246_2906441_+	NA|71aa|up_9|CP031742.1_2888347_2888560_+	COG1928, PMT1, Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]	NA|158aa|up_8|CP031742.1_2888610_2889084_+	NA	NA|116aa|up_7|CP031742.1_2889087_2889435_-	pfam07045, DUF1330, Domain of unknown function (DUF1330)	NA|540aa|up_6|CP031742.1_2889759_2891379_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|567aa|up_5|CP031742.1_2891509_2893210_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|62aa|up_4|CP031742.1_2893613_2893799_-	NA	NA|303aa|up_3|CP031742.1_2893923_2894832_-	pfam04471, Mrr_cat, Restriction endonuclease	NA|184aa|up_2|CP031742.1_2895075_2895627_+	cd04333, ProX_deacylase, This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens  ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS)	NA|284aa|up_1|CP031742.1_2895623_2896475_+	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein	NA|140aa|up_0|CP031742.1_2896793_2897213_+	TIGR02246, hypothetical_protein, conserved hypothetical protein	NA|409aa|down_0|CP031742.1_2897518_2898745_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|155aa|down_1|CP031742.1_2899004_2899469_+	pfam04686, SsgA, Streptomyces sporulation and cell division protein, SsgA	NA|754aa|down_2|CP031742.1_2899560_2901822_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|191aa|down_3|CP031742.1_2902003_2902576_-	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal	NA|1117aa|down_4|CP031742.1_2902799_2906150_+	COG4946, COG4946, Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]	NA|65aa|down_5|CP031742.1_2906246_2906441_+	NA	NA|292aa|down_6|CP031742.1_2906517_2907393_-	PRK05872, PRK05872, short chain dehydrogenase; Provisional	NA|306aa|down_7|CP031742.1_2907389_2908307_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|518aa|down_8|CP031742.1_2908303_2909857_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|226aa|down_9|CP031742.1_2909989_2910667_+	cd04778, HTH_MerR-like_sg2, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	15	2990611-2990827	3,13,3	CRT,CRISPRCasFinder,PILER-CR	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	GGGACCACCCCCGCACACGCGGGGACCAC,GGACCACCCCCGCACACGCGGGGACCAC,GGGACCACCCCCGCACACGCGGGGACCACACTCC	29,28,34	0	0	NA	NA	NA:NA:NA	3,3,2	3	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|345aa|up_1|CP031742.1_2986597_2987632_-,NA|249aa|down_2|CP031742.1_2995612_2996359_+,NA|67aa|down_8|CP031742.1_3004468_3004669_+	NA|97aa|up_9|CP031742.1_2976484_2976775_-	pfam01381, HTH_3, Helix-turn-helix	NA|256aa|up_8|CP031742.1_2976881_2977649_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|610aa|up_7|CP031742.1_2977666_2979496_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|917aa|up_6|CP031742.1_2979651_2982402_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|254aa|up_5|CP031742.1_2982601_2983363_+	pfam05719, GPP34, Golgi phosphoprotein 3 (GPP34)	NA|286aa|up_4|CP031742.1_2983735_2984593_+	pfam13560, HTH_31, Helix-turn-helix domain	NA|70aa|up_3|CP031742.1_2985018_2985228_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|372aa|up_2|CP031742.1_2985332_2986448_-	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase	NA|345aa|up_1|CP031742.1_2986597_2987632_-	NA	NA|912aa|up_0|CP031742.1_2987714_2990450_-	sd00006, TPR, Tetratricopeptide repeat	NA|204aa|down_0|CP031742.1_2991044_2991656_+	pfam14124, DUF4291, Domain of unknown function (DUF4291)	NA|610aa|down_1|CP031742.1_2993715_2995545_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|249aa|down_2|CP031742.1_2995612_2996359_+	NA	NA|692aa|down_3|CP031742.1_2996432_2998508_-	pfam01341, Glyco_hydro_6, Glycosyl hydrolases family 6	NA|407aa|down_4|CP031742.1_2998857_3000078_-	cd03469, Rieske_RO_Alpha_N, Rieske non-heme iron oxygenase (RO) family, N-terminal Rieske domain of the oxygenase alpha subunit; The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms	NA|141aa|down_5|CP031742.1_3001342_3001765_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|440aa|down_6|CP031742.1_3001939_3003259_+	PRK00077, eno, enolase; Provisional	NA|348aa|down_7|CP031742.1_3003280_3004324_-	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]	NA|67aa|down_8|CP031742.1_3004468_3004669_+	NA	NA|860aa|down_9|CP031742.1_3004682_3007262_-	PRK09234, fbiC, FO synthase; Reviewed
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	16	3000228-3000440	14,4,4	CRISPRCasFinder,CRT,PILER-CR	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	GGGACCACCCCCGCATACGCGGGGAGCACC,GGGACCACCCCCGCATACGCGGGGAGCAC,CGGGACCACCCCCGCATACGCGGGGAGCACC	30,29,31	0	0	NA	NA	NA:NA:NA	3,3,2	3	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|345aa|up_6|CP031742.1_2986597_2987632_-,NA|249aa|up_2|CP031742.1_2995612_2996359_+,NA|67aa|down_3|CP031742.1_3004468_3004669_+	NA|286aa|up_9|CP031742.1_2983735_2984593_+	pfam13560, HTH_31, Helix-turn-helix domain	NA|70aa|up_8|CP031742.1_2985018_2985228_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|372aa|up_7|CP031742.1_2985332_2986448_-	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase	NA|345aa|up_6|CP031742.1_2986597_2987632_-	NA	NA|912aa|up_5|CP031742.1_2987714_2990450_-	sd00006, TPR, Tetratricopeptide repeat	NA|204aa|up_4|CP031742.1_2991044_2991656_+	pfam14124, DUF4291, Domain of unknown function (DUF4291)	NA|610aa|up_3|CP031742.1_2993715_2995545_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|249aa|up_2|CP031742.1_2995612_2996359_+	NA	NA|692aa|up_1|CP031742.1_2996432_2998508_-	pfam01341, Glyco_hydro_6, Glycosyl hydrolases family 6	NA|407aa|up_0|CP031742.1_2998857_3000078_-	cd03469, Rieske_RO_Alpha_N, Rieske non-heme iron oxygenase (RO) family, N-terminal Rieske domain of the oxygenase alpha subunit; The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms	NA|141aa|down_0|CP031742.1_3001342_3001765_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|440aa|down_1|CP031742.1_3001939_3003259_+	PRK00077, eno, enolase; Provisional	NA|348aa|down_2|CP031742.1_3003280_3004324_-	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]	NA|67aa|down_3|CP031742.1_3004468_3004669_+	NA	NA|860aa|down_4|CP031742.1_3004682_3007262_-	PRK09234, fbiC, FO synthase; Reviewed	NA|106aa|down_5|CP031742.1_3007307_3007625_-	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain	NA|204aa|down_6|CP031742.1_3007670_3008282_-	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|711aa|down_7|CP031742.1_3008278_3010411_-	pfam01804, Penicil_amidase, Penicillin amidase	NA|241aa|down_8|CP031742.1_3010655_3011378_+	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|431aa|down_9|CP031742.1_3011512_3012805_+	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	17	3132728-3132939	5,15,5	PILER-CR,CRISPRCasFinder,CRT	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	GGGACCAACCCCGCACGCGCGGGGAGCAG,CTGCTCCCCGCGCGTGCGGGGTTGG,CTGCTCCCCGCGCGTGCGGGGTTGGTCCC	29,25,29	0	0	NA	NA	NA:NA:NA	2,3,3	3	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|175aa|up_5|CP031742.1_3128276_3128801_+,NA|84aa|up_1|CP031742.1_3131192_3131444_+,NA	NA|420aa|up_9|CP031742.1_3119224_3120484_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|1070aa|up_8|CP031742.1_3121416_3124626_-	PRK14083, PRK14083, HSP90 family protein; Provisional	NA|287aa|up_7|CP031742.1_3125547_3126408_-	pfam11228, DUF3027, Protein of unknown function (DUF3027)	NA|476aa|up_6|CP031742.1_3126819_3128247_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|175aa|up_5|CP031742.1_3128276_3128801_+	NA	NA|242aa|up_4|CP031742.1_3128821_3129547_+	cd17766, futalosine_nucleosidase_MqnB, futalosine nucleosidase which catalyzes the hydrolysis of futalosine to dehypoxanthinylfutalosine and a hypoxanthine base; similar to Thermus thermophiles MqnB	NA|301aa|up_3|CP031742.1_3129647_3130550_+	cd13635, PBP2_Ttha1568_Mqnd, A menaquinone biosynthetic enzyme exhibits the type 2 periplasmic-binding protein fold	NA|128aa|up_2|CP031742.1_3130667_3131051_-	COG1278, CspC, Cold shock proteins [Transcription]	NA|84aa|up_1|CP031742.1_3131192_3131444_+	NA	NA|234aa|up_0|CP031742.1_3131758_3132460_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|640aa|down_0|CP031742.1_3132949_3134869_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|642aa|down_1|CP031742.1_3134865_3136791_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|44aa|down_2|CP031742.1_3136949_3137081_-	NF033212, SapB_AmfS_lanti, SapB/AmfS family lantipeptide	NA|858aa|down_3|CP031742.1_3137214_3139788_-	cd04791, LanC_SerThrkinase, Lanthionine synthetase C-like domain associated with serine/threonine kinases	NA|326aa|down_4|CP031742.1_3140000_3140978_-	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|285aa|down_5|CP031742.1_3140974_3141829_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|363aa|down_6|CP031742.1_3141825_3142914_-	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism]	NA|355aa|down_7|CP031742.1_3142931_3143996_-	pfam01032, FecCD, FecCD transport family	NA|229aa|down_8|CP031742.1_3144150_3144837_+	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|181aa|down_9|CP031742.1_3145670_3146213_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	18	3145518-3145604	16	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	ACAGCCCGGCCGGCGATTGAGGCC	24	1	1	3145542-3145580	CP031742.1_4869907-4869869	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA,NA|66aa|down_8|CP031742.1_3153454_3153652_+	NA|234aa|up_9|CP031742.1_3131758_3132460_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|640aa|up_8|CP031742.1_3132949_3134869_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|642aa|up_7|CP031742.1_3134865_3136791_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|44aa|up_6|CP031742.1_3136949_3137081_-	NF033212, SapB_AmfS_lanti, SapB/AmfS family lantipeptide	NA|858aa|up_5|CP031742.1_3137214_3139788_-	cd04791, LanC_SerThrkinase, Lanthionine synthetase C-like domain associated with serine/threonine kinases	NA|326aa|up_4|CP031742.1_3140000_3140978_-	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|285aa|up_3|CP031742.1_3140974_3141829_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|363aa|up_2|CP031742.1_3141825_3142914_-	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism]	NA|355aa|up_1|CP031742.1_3142931_3143996_-	pfam01032, FecCD, FecCD transport family	NA|229aa|up_0|CP031742.1_3144150_3144837_+	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|181aa|down_0|CP031742.1_3145670_3146213_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|341aa|down_1|CP031742.1_3146440_3147463_+	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|563aa|down_2|CP031742.1_3147838_3149527_+	cd01150, AXO, Peroxisomal acyl-CoA oxidase	NA|440aa|down_3|CP031742.1_3149643_3150963_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|203aa|down_4|CP031742.1_3151097_3151706_-	COG2229, COG2229, Predicted GTPase [General function prediction only]	NA|125aa|down_5|CP031742.1_3151680_3152055_-	pfam05331, DUF742, Protein of unknown function (DUF742)	NA|134aa|down_6|CP031742.1_3152051_3152453_-	pfam03259, Robl_LC7, Roadblock/LC7 domain	NA|342aa|down_7|CP031742.1_3152449_3153475_-	cd00075, HATPase, Histidine kinase-like ATPase domain	NA|66aa|down_8|CP031742.1_3153454_3153652_+	NA	NA|360aa|down_9|CP031742.1_3153995_3155075_-	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	19	3568770-3568855	17	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	TGGCCTCAAGCGCCGGCCGGGCTG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|157aa|up_5|CP031742.1_3564241_3564712_-,NA|152aa|up_3|CP031742.1_3565409_3565865_+,NA|339aa|up_0|CP031742.1_3567504_3568521_+,NA|141aa|down_0|CP031742.1_3569602_3570025_-,NA|211aa|down_8|CP031742.1_3578132_3578765_+,NA|99aa|down_9|CP031742.1_3578792_3579089_-	NA|621aa|up_9|CP031742.1_3558496_3560359_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|325aa|up_8|CP031742.1_3560818_3561793_+	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|313aa|up_7|CP031742.1_3562175_3563114_-	TIGR03620, F420_MSMEG_4141, probable F420-dependent oxidoreductase, MSMEG_4141 family	NA|239aa|up_6|CP031742.1_3563426_3564143_+	pfam11575, FhuF_C, FhuF 2Fe-2S C-terminal domain	NA|157aa|up_5|CP031742.1_3564241_3564712_-	NA	NA|154aa|up_4|CP031742.1_3564951_3565413_+	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]	NA|152aa|up_3|CP031742.1_3565409_3565865_+	NA	NA|140aa|up_2|CP031742.1_3566048_3566468_+	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|323aa|up_1|CP031742.1_3566539_3567508_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|339aa|up_0|CP031742.1_3567504_3568521_+	NA	NA|141aa|down_0|CP031742.1_3569602_3570025_-	NA	NA|345aa|down_1|CP031742.1_3570210_3571245_-	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|266aa|down_2|CP031742.1_3571921_3572719_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|378aa|down_3|CP031742.1_3572788_3573922_-	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism]	NA|385aa|down_4|CP031742.1_3573918_3575073_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|230aa|down_5|CP031742.1_3575317_3576007_+	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family	NA|405aa|down_6|CP031742.1_3576225_3577440_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|122aa|down_7|CP031742.1_3577417_3577783_-	pfam08000, bPH_1, Bacterial PH domain	NA|211aa|down_8|CP031742.1_3578132_3578765_+	NA	NA|99aa|down_9|CP031742.1_3578792_3579089_-	NA
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	20	3705389-3705499	6	PILER-CR	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	GATGTTTCACGTGAAACATC	20	0	0	NA	NA	NA	2	2	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|129aa|up_1|CP031742.1_3703804_3704191_-,NA	NA|476aa|up_9|CP031742.1_3693655_3695083_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|327aa|up_8|CP031742.1_3695103_3696084_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|438aa|up_7|CP031742.1_3696086_3697400_-	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit	NA|221aa|up_6|CP031742.1_3697741_3698404_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|524aa|up_5|CP031742.1_3698507_3700079_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|549aa|up_4|CP031742.1_3700478_3702125_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|183aa|up_3|CP031742.1_3702206_3702755_-	pfam10759, DUF2587, Protein of unknown function (DUF2587)	NA|267aa|up_2|CP031742.1_3702774_3703575_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|129aa|up_1|CP031742.1_3703804_3704191_-	NA	NA|328aa|up_0|CP031742.1_3704375_3705359_-	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase	NA|369aa|down_0|CP031742.1_3705506_3706613_-	pfam02254, TrkA_N, TrkA-N domain	NA|585aa|down_1|CP031742.1_3706609_3708364_-	cd00887, MoeA, MoeA family	NA|306aa|down_2|CP031742.1_3708360_3709278_-	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide	NA|479aa|down_3|CP031742.1_3709704_3711141_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|349aa|down_4|CP031742.1_3711140_3712187_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|399aa|down_5|CP031742.1_3712183_3713380_-	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit	NA|155aa|down_6|CP031742.1_3713584_3714049_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|240aa|down_7|CP031742.1_3714201_3714921_-	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain	NA|262aa|down_8|CP031742.1_3715037_3715823_-	pfam00588, SpoU_methylase, SpoU rRNA Methylase family	NA|406aa|down_9|CP031742.1_3715833_3717051_-	smart00752, HTTM, Horizontally Transferred TransMembrane Domain
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	21	3899138-3899223	18	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	AGCCCGGCCGGCGTTTGAGGCCA	23	1	1	3899161-3899200	CP031742.1_2850515-2850476	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|165aa|up_3|CP031742.1_3895332_3895827_+,NA|140aa|up_1|CP031742.1_3897439_3897859_-,NA|135aa|down_5|CP031742.1_3906407_3906812_-,NA|498aa|down_9|CP031742.1_3914702_3916196_+	NA|230aa|up_9|CP031742.1_3889446_3890136_-	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|99aa|up_8|CP031742.1_3890303_3890600_-	COG5450, COG5450, Transcription regulator of the Arc/MetJ class [Transcription]	NA|528aa|up_7|CP031742.1_3890738_3892322_-	cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus aminopeptidase and similar proteins	NA|198aa|up_6|CP031742.1_3892542_3893136_-	TIGR03252, TIGR03252, uncharacterized HhH-GPD family protein	NA|271aa|up_5|CP031742.1_3893199_3894012_-	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|250aa|up_4|CP031742.1_3894410_3895160_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|165aa|up_3|CP031742.1_3895332_3895827_+	NA	NA|457aa|up_2|CP031742.1_3895899_3897270_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|140aa|up_1|CP031742.1_3897439_3897859_-	NA	NA|402aa|up_0|CP031742.1_3897851_3899056_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|191aa|down_0|CP031742.1_3899608_3900181_+	pfam04471, Mrr_cat, Restriction endonuclease	NA|174aa|down_1|CP031742.1_3900555_3901077_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|137aa|down_2|CP031742.1_3901105_3901516_+	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|797aa|down_3|CP031742.1_3901583_3903974_+	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]	NA|468aa|down_4|CP031742.1_3905024_3906428_+	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|135aa|down_5|CP031742.1_3906407_3906812_-	NA	NA|706aa|down_6|CP031742.1_3907523_3909641_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|425aa|down_7|CP031742.1_3909701_3910976_+	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|603aa|down_8|CP031742.1_3911379_3913188_+	cd07328, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase	NA|498aa|down_9|CP031742.1_3914702_3916196_+	NA
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	22	4007615-4008745	19,6,7	CRISPRCasFinder,CRT,PILER-CR	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	CGGAACACCCCCGCCCTCGCGGGGACCAC,CGGAACACCCCCGCCCTCGCGGGGACCAC,GGAACACCCCCGCCCTCGCGGGGACCAC	29,29,28	0	0	NA	NA	NA:NA:NA	18,18,17	18	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|185aa|up_9|CP031742.1_3999084_3999639_+,NA|185aa|up_7|CP031742.1_4001455_4002010_+,NA|73aa|up_4|CP031742.1_4004578_4004797_-,NA|66aa|up_3|CP031742.1_4004793_4004991_-,NA|233aa|down_6|CP031742.1_4013437_4014136_-	NA|185aa|up_9|CP031742.1_3999084_3999639_+	NA	NA|523aa|up_8|CP031742.1_3999657_4001226_-	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|185aa|up_7|CP031742.1_4001455_4002010_+	NA	NA|400aa|up_6|CP031742.1_4002022_4003222_-	TIGR04188, conserved_hypothetical_protein, methyltransferase, ATP-grasp peptide maturase system	NA|86aa|up_5|CP031742.1_4004190_4004448_-	TIGR04186, conserved_hypothetical_protein, putative ATP-grasp target RiPP	NA|73aa|up_4|CP031742.1_4004578_4004797_-	NA	NA|66aa|up_3|CP031742.1_4004793_4004991_-	NA	NA|147aa|up_2|CP031742.1_4004987_4005428_-	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|426aa|up_1|CP031742.1_4005772_4007050_+	COG2976, COG2976, Uncharacterized protein conserved in bacteria [Function unknown]	NA|180aa|up_0|CP031742.1_4007046_4007586_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|220aa|down_0|CP031742.1_4008879_4009539_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|424aa|down_1|CP031742.1_4009547_4010819_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|192aa|down_2|CP031742.1_4011211_4011787_+	pfam03928, Haem_degrading, Haem-degrading	NA|207aa|down_3|CP031742.1_4011827_4012448_+	sd00045, ANK, ankyrin repeats	NA|136aa|down_4|CP031742.1_4012478_4012886_-	COG0251, TdcF, Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis]	NA|127aa|down_5|CP031742.1_4013053_4013434_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|233aa|down_6|CP031742.1_4013437_4014136_-	NA	NA|67aa|down_7|CP031742.1_4014292_4014493_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|314aa|down_8|CP031742.1_4014371_4015313_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|65aa|down_9|CP031742.1_4015500_4015695_+	pfam14404, Strep_pep, Ribosomally synthesized peptide in Streptomyces species
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	23	4233995-4234137	20	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	TGGCCTCAAGCGCCGGCCGGGCT	23	0	0	NA	NA	NA	2	2	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|67aa|up_7|CP031742.1_4227979_4228180_-,NA|105aa|up_1|CP031742.1_4232483_4232798_+,NA|175aa|down_8|CP031742.1_4245814_4246339_-	NA|357aa|up_9|CP031742.1_4226160_4227231_+	COG5012, COG5012, Predicted cobalamin binding protein [General function prediction only]	NA|125aa|up_8|CP031742.1_4227282_4227657_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|67aa|up_7|CP031742.1_4227979_4228180_-	NA	NA|117aa|up_6|CP031742.1_4228178_4228529_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|180aa|up_5|CP031742.1_4228656_4229196_+	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|119aa|up_4|CP031742.1_4229227_4229584_-	cd04766, HTH_HspR, Helix-Turn-Helix DNA binding domain of the HspR transcription regulator	NA|68aa|up_3|CP031742.1_4230169_4230373_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|504aa|up_2|CP031742.1_4230806_4232318_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|105aa|up_1|CP031742.1_4232483_4232798_+	NA	NA|330aa|up_0|CP031742.1_4232886_4233876_-	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|262aa|down_0|CP031742.1_4234289_4235075_+	cd01832, SGNH_hydrolase_like_1, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases	NA|562aa|down_1|CP031742.1_4235659_4237345_-	PRK14975, PRK14975, bifunctional 3'-5' exonuclease/DNA polymerase; Provisional	NA|392aa|down_2|CP031742.1_4237474_4238650_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|385aa|down_3|CP031742.1_4238697_4239852_-	pfam06224, HTH_42, Winged helix DNA-binding domain	NA|183aa|down_4|CP031742.1_4239921_4240470_+	PRK12863, PRK12863, YciI-like protein; Reviewed	NA|420aa|down_5|CP031742.1_4240632_4241892_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|417aa|down_6|CP031742.1_4242172_4243423_+	pfam10979, DUF2786, Protein of unknown function (DUF2786)	NA|758aa|down_7|CP031742.1_4243530_4245804_+	TIGR01667, Uncharacterized_protein_HI_1680, integral membrane protein, YccS/YhfK family	NA|175aa|down_8|CP031742.1_4245814_4246339_-	NA	NA|81aa|down_9|CP031742.1_4246706_4246949_+	pfam04149, DUF397, Domain of unknown function (DUF397)
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	24	4235316-4235482	8	PILER-CR	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	TGGCCTCAAACGCCGGCCGGGCTGAGGGGG	30	0	0	NA	NA	NA	2	2	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|67aa|up_8|CP031742.1_4227979_4228180_-,NA|105aa|up_2|CP031742.1_4232483_4232798_+,NA|175aa|down_7|CP031742.1_4245814_4246339_-	NA|125aa|up_9|CP031742.1_4227282_4227657_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|67aa|up_8|CP031742.1_4227979_4228180_-	NA	NA|117aa|up_7|CP031742.1_4228178_4228529_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|180aa|up_6|CP031742.1_4228656_4229196_+	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|119aa|up_5|CP031742.1_4229227_4229584_-	cd04766, HTH_HspR, Helix-Turn-Helix DNA binding domain of the HspR transcription regulator	NA|68aa|up_4|CP031742.1_4230169_4230373_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|504aa|up_3|CP031742.1_4230806_4232318_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|105aa|up_2|CP031742.1_4232483_4232798_+	NA	NA|330aa|up_1|CP031742.1_4232886_4233876_-	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|262aa|up_0|CP031742.1_4234289_4235075_+	cd01832, SGNH_hydrolase_like_1, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases	NA|562aa|down_0|CP031742.1_4235659_4237345_-	PRK14975, PRK14975, bifunctional 3'-5' exonuclease/DNA polymerase; Provisional	NA|392aa|down_1|CP031742.1_4237474_4238650_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|385aa|down_2|CP031742.1_4238697_4239852_-	pfam06224, HTH_42, Winged helix DNA-binding domain	NA|183aa|down_3|CP031742.1_4239921_4240470_+	PRK12863, PRK12863, YciI-like protein; Reviewed	NA|420aa|down_4|CP031742.1_4240632_4241892_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|417aa|down_5|CP031742.1_4242172_4243423_+	pfam10979, DUF2786, Protein of unknown function (DUF2786)	NA|758aa|down_6|CP031742.1_4243530_4245804_+	TIGR01667, Uncharacterized_protein_HI_1680, integral membrane protein, YccS/YhfK family	NA|175aa|down_7|CP031742.1_4245814_4246339_-	NA	NA|81aa|down_8|CP031742.1_4246706_4246949_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|160aa|down_9|CP031742.1_4246998_4247478_-	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	25	4733823-4733968	21	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	CACCCCCGCGTACGCGGGGACCAC	24	0	0	NA	NA	NA	2	2	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA,NA|71aa|down_0|CP031742.1_4734232_4734445_+,NA|192aa|down_3|CP031742.1_4736922_4737498_+,NA|186aa|down_6|CP031742.1_4739495_4740053_+,NA|166aa|down_8|CP031742.1_4741830_4742328_+	NA|155aa|up_9|CP031742.1_4722355_4722820_+	cd06587, VOC, vicinal oxygen chelate (VOC) family	NA|507aa|up_8|CP031742.1_4722880_4724401_-	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|398aa|up_7|CP031742.1_4724497_4725691_-	TIGR03356, BGL, beta-galactosidase	NA|278aa|up_6|CP031742.1_4725755_4726589_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|317aa|up_5|CP031742.1_4726585_4727536_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|417aa|up_4|CP031742.1_4727541_4728792_-	cd14747, PBP2_MalE, Maltose-binding protein MalE; possesses type 2 periplasmic binding fold	NA|300aa|up_3|CP031742.1_4729485_4730385_+	COG3458, COG3458, Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|284aa|up_2|CP031742.1_4730482_4731334_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|293aa|up_1|CP031742.1_4731561_4732440_-	cd08663, DAP_dppA_1, Peptidase M55, D-aminopeptidase dipeptide-binding protein family	NA|370aa|up_0|CP031742.1_4732476_4733586_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|71aa|down_0|CP031742.1_4734232_4734445_+	NA	NA|177aa|down_1|CP031742.1_4734573_4735104_-	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|476aa|down_2|CP031742.1_4735210_4736638_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|192aa|down_3|CP031742.1_4736922_4737498_+	NA	NA|406aa|down_4|CP031742.1_4737634_4738852_+	pfam03738, GSP_synth, Glutathionylspermidine synthase preATP-grasp	NA|165aa|down_5|CP031742.1_4738888_4739383_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|186aa|down_6|CP031742.1_4739495_4740053_+	NA	NA|418aa|down_7|CP031742.1_4740220_4741474_-	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional	NA|166aa|down_8|CP031742.1_4741830_4742328_+	NA	NA|278aa|down_9|CP031742.1_4742767_4743601_+	pfam13365, Trypsin_2, Trypsin-like peptidase domain
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	26	5079334-5079412	22	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	TGGCCTCAAGCGCCGGCCGGGCTGG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA,NA|330aa|down_3|CP031742.1_5081948_5082938_+,NA|94aa|down_8|CP031742.1_5087879_5088161_-	NA|566aa|up_9|CP031742.1_5060685_5062383_+	COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]	NA|122aa|up_8|CP031742.1_5062479_5062845_+	cd07238, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|1271aa|up_7|CP031742.1_5062990_5066803_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|480aa|up_6|CP031742.1_5066989_5068429_+	pfam05576, Peptidase_S37, PS-10 peptidase S37	NA|619aa|up_5|CP031742.1_5068515_5070372_-	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain	NA|753aa|up_4|CP031742.1_5070791_5073050_+	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|430aa|up_3|CP031742.1_5073248_5074538_+	PRK05614, gltA, citrate synthase	NA|764aa|up_2|CP031742.1_5075143_5077435_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|103aa|up_1|CP031742.1_5077559_5077868_-	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]	NA|361aa|up_0|CP031742.1_5078130_5079213_+	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family	NA|64aa|down_0|CP031742.1_5079459_5079651_-	PHA02519, PHA02519, plasmid partition protein SopA; Reviewed	NA|308aa|down_1|CP031742.1_5079835_5080759_-	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase	NA|313aa|down_2|CP031742.1_5081013_5081952_+	TIGR04382, myo-inositol_catabolism_protein, 5-dehydro-2-deoxygluconokinase	NA|330aa|down_3|CP031742.1_5081948_5082938_+	NA	NA|284aa|down_4|CP031742.1_5082943_5083795_+	pfam04962, KduI, KduI/IolB family	NA|629aa|down_5|CP031742.1_5083791_5085678_+	TIGR04377, 3D-35/4-trihydroxycyclohexane-12-dione_hydrolase, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase	NA|500aa|down_6|CP031742.1_5085691_5087191_+	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|200aa|down_7|CP031742.1_5087269_5087869_+	pfam06042, NTP_transf_6, Nucleotidyltransferase	NA|94aa|down_8|CP031742.1_5087879_5088161_-	NA	NA|890aa|down_9|CP031742.1_5089863_5092533_+	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	27	5100559-5100832	9,7,23	PILER-CR,CRT,CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	GGGACCACCCCCGCACACGCGGGGAGCACT,AGTGCTCCCCGCGTGTGCGGGGGTGGTCCC,GTGCTCCCCGCGTGTGCGGGGGTGGTCCC	30,30,29	0	0	NA	NA	NA:NA:NA	4,4,4	4	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|94aa|up_6|CP031742.1_5087879_5088161_-,NA|587aa|up_1|CP031742.1_5096186_5097947_-,NA|120aa|down_4|CP031742.1_5105278_5105638_-,NA|381aa|down_6|CP031742.1_5106636_5107779_+,NA|212aa|down_8|CP031742.1_5109624_5110260_+	NA|629aa|up_9|CP031742.1_5083791_5085678_+	TIGR04377, 3D-35/4-trihydroxycyclohexane-12-dione_hydrolase, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase	NA|500aa|up_8|CP031742.1_5085691_5087191_+	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|200aa|up_7|CP031742.1_5087269_5087869_+	pfam06042, NTP_transf_6, Nucleotidyltransferase	NA|94aa|up_6|CP031742.1_5087879_5088161_-	NA	NA|890aa|up_5|CP031742.1_5089863_5092533_+	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|293aa|up_4|CP031742.1_5092529_5093408_+	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only]	NA|220aa|up_3|CP031742.1_5093504_5094164_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|584aa|up_2|CP031742.1_5094289_5096041_-	pfam13515, FUSC_2, Fusaric acid resistance protein-like	NA|587aa|up_1|CP031742.1_5096186_5097947_-	NA	NA|710aa|up_0|CP031742.1_5097950_5100080_-	pfam13424, TPR_12, Tetratricopeptide repeat	NA|518aa|down_0|CP031742.1_5100964_5102518_-	pfam08386, Abhydrolase_4, TAP-like protein	NA|136aa|down_1|CP031742.1_5102671_5103079_-	TIGR02869, Spore_cortex-lytic_enzyme, spore cortex-lytic enzyme	NA|304aa|down_2|CP031742.1_5103410_5104322_+	pfam01471, PG_binding_1, Putative peptidoglycan binding domain	NA|284aa|down_3|CP031742.1_5104318_5105170_+	pfam10901, DUF2690, Protein of unknown function (DUF2690)	NA|120aa|down_4|CP031742.1_5105278_5105638_-	NA	NA|278aa|down_5|CP031742.1_5105649_5106483_-	cd18107, SpoU-like_AviRb, SAM-dependent rRNA methylase related to AviRb	NA|381aa|down_6|CP031742.1_5106636_5107779_+	NA	NA|405aa|down_7|CP031742.1_5108101_5109316_-	pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap	NA|212aa|down_8|CP031742.1_5109624_5110260_+	NA	NA|1444aa|down_9|CP031742.1_5110325_5114657_-	cd14490, CBM6-CBM35-CBM36_like_1, uncharacterized members of the carbohydrate binding module 6 (CBM6) and CBM35_like superfamily
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	28	5148173-5148385	8,24,10	CRT,CRISPRCasFinder,PILER-CR	no	Cas9_archaeal	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	 or Type II-C?, Type II-B,Type II-A	CGGGACCACCCCCGCCTGCGCGGGGACCAC,GGGACCACCCCCGCCTGCGCGGGGACCAC,GACGGGACCACCCCCGCCTGCGCGGGGACCAC	30,29,32	0	0	NA	NA	NA:NA:NA	3,3,2	3	orTypeII-C?,TypeII-A,TypeII-B	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|441aa|up_2|CP031742.1_5143895_5145218_-,NA|323aa|up_0|CP031742.1_5146348_5147317_-,NA|117aa|down_7|CP031742.1_5159704_5160055_+,NA|66aa|down_9|CP031742.1_5162404_5162602_+	NA|135aa|up_9|CP031742.1_5134089_5134494_-	cd14771, TrHb2_Mt-trHbO-like_O, Truncated hemoglobins, group 2 (O); Mycobacterium tuberculosis hemoglobin O like	NA|328aa|up_8|CP031742.1_5134731_5135715_+	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR)	NA|314aa|up_7|CP031742.1_5135851_5136793_+	TIGR04188, conserved_hypothetical_protein, methyltransferase, ATP-grasp peptide maturase system	NA|385aa|up_6|CP031742.1_5136871_5138026_-	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|453aa|up_5|CP031742.1_5138192_5139551_-	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|528aa|up_4|CP031742.1_5139750_5141334_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|793aa|up_3|CP031742.1_5141337_5143716_-	pfam16918, PknG_TPR, Protein kinase G tetratricopeptide repeat	NA|441aa|up_2|CP031742.1_5143895_5145218_-	NA	NA|336aa|up_1|CP031742.1_5145326_5146334_-	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|323aa|up_0|CP031742.1_5146348_5147317_-	NA	NA|326aa|down_0|CP031742.1_5148537_5149515_-	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]	NA|422aa|down_1|CP031742.1_5149505_5150771_-	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase	NA|430aa|down_2|CP031742.1_5150815_5152105_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|355aa|down_3|CP031742.1_5152329_5153394_-	pfam00924, MS_channel, Mechanosensitive ion channel	Cas9_archaeal|193aa|down_4|CP031742.1_5153789_5154368_+	COG1403, McrA, Restriction endonuclease [Defense mechanisms]	NA|500aa|down_5|CP031742.1_5154797_5156297_+	TIGR01840, poly3-hydroxybutyrate_depolymerase_A_precursor, esterase, PHB depolymerase family	NA|1020aa|down_6|CP031742.1_5156293_5159353_-	pfam07555, NAGidase, beta-N-acetylglucosaminidase	NA|117aa|down_7|CP031742.1_5159704_5160055_+	NA	NA|765aa|down_8|CP031742.1_5160056_5162351_+	pfam02446, Glyco_hydro_77, 4-alpha-glucanotransferase	NA|66aa|down_9|CP031742.1_5162404_5162602_+	NA
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	29	5210034-5210120	25	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	CAGCCCGGCCGGCGCTTGAGGCC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA,NA|65aa|down_7|CP031742.1_5220178_5220373_+	NA|1107aa|up_9|CP031742.1_5193632_5196953_-	cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_II, Peptidase S8 family domain in Tripeptidyl aminopeptidases_II	NA|401aa|up_8|CP031742.1_5197393_5198596_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|139aa|up_7|CP031742.1_5198741_5199158_+	pfam01471, PG_binding_1, Putative peptidoglycan binding domain	NA|862aa|up_6|CP031742.1_5199242_5201828_-	TIGR02412, Aminopeptidase_N, aminopeptidase N, Streptomyces lividans type	NA|215aa|up_5|CP031742.1_5201993_5202638_+	pfam01323, DSBA, DSBA-like thioredoxin domain	NA|485aa|up_4|CP031742.1_5202723_5204178_+	COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]	NA|213aa|up_3|CP031742.1_5204363_5205002_-	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|483aa|up_2|CP031742.1_5205168_5206617_-	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|481aa|up_1|CP031742.1_5206807_5208250_-	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|198aa|up_0|CP031742.1_5208600_5209194_+	pfam02632, BioY, BioY family	NA|479aa|down_0|CP031742.1_5210254_5211691_-	TIGR01773, GABA_permease, gamma-aminobutyrate permease	NA|164aa|down_1|CP031742.1_5212064_5212556_+	PRK05571, PRK05571, ribose-5-phosphate isomerase B; Provisional	NA|294aa|down_2|CP031742.1_5212555_5213437_+	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]	NA|410aa|down_3|CP031742.1_5213379_5214609_-	PRK01346, PRK01346, enhanced intracellular survival protein Eis	NA|372aa|down_4|CP031742.1_5214768_5215884_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|401aa|down_5|CP031742.1_5216665_5217868_-	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|401aa|down_6|CP031742.1_5218201_5219404_-	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|65aa|down_7|CP031742.1_5220178_5220373_+	NA	NA|512aa|down_8|CP031742.1_5220880_5222416_+	PRK01490, tig, trigger factor; Provisional	NA|220aa|down_9|CP031742.1_5222672_5223332_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	30	5285921-5286006	26	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	GGCCTCAAGCGCCGGCCGGGCTG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|78aa|up_9|CP031742.1_5271035_5271269_+,NA|248aa|up_6|CP031742.1_5276262_5277006_+,NA|76aa|up_1|CP031742.1_5284245_5284473_+,NA	NA|78aa|up_9|CP031742.1_5271035_5271269_+	NA	NA|449aa|up_8|CP031742.1_5271247_5272594_-	PRK13375, pimE, mannosyltransferase; Provisional	NA|966aa|up_7|CP031742.1_5273148_5276046_+	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|248aa|up_6|CP031742.1_5276262_5277006_+	NA	NA|283aa|up_5|CP031742.1_5277136_5277985_+	TIGR00762, DegV, EDD domain protein, DegV family	NA|375aa|up_4|CP031742.1_5278134_5279259_+	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]	NA|1066aa|up_3|CP031742.1_5279903_5283101_+	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|296aa|up_2|CP031742.1_5283242_5284130_+	pfam04264, YceI, YceI-like domain	NA|76aa|up_1|CP031742.1_5284245_5284473_+	NA	NA|330aa|up_0|CP031742.1_5284916_5285906_+	PRK07914, PRK07914, hypothetical protein; Reviewed	NA|89aa|down_0|CP031742.1_5286195_5286462_-	pfam01649, Ribosomal_S20p, Ribosomal protein S20	NA|624aa|down_1|CP031742.1_5286752_5288624_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|656aa|down_2|CP031742.1_5288995_5290963_+	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]	NA|411aa|down_3|CP031742.1_5291065_5292298_+	PRK05628, PRK05628, coproporphyrinogen III oxidase; Validated	NA|195aa|down_4|CP031742.1_5292302_5292887_+	cd06260, DUF820, Domain of unknown function (DUF820)	NA|278aa|down_5|CP031742.1_5292894_5293728_-	pfam11296, DUF3097, Protein of unknown function (DUF3097)	NA|247aa|down_6|CP031742.1_5293737_5294478_-	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|339aa|down_7|CP031742.1_5294698_5295715_+	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|381aa|down_8|CP031742.1_5295715_5296858_+	PRK14278, PRK14278, chaperone protein DnaJ; Provisional	NA|362aa|down_9|CP031742.1_5297012_5298098_+	pfam03060, NMO, Nitronate monooxygenase
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	31	5683831-5683917	27	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	GGTGTTCCCCGCGTGTGCGGGGGTGG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|72aa|up_9|CP031742.1_5672690_5672906_+,NA|93aa|up_5|CP031742.1_5675575_5675854_+,NA|482aa|down_1|CP031742.1_5685201_5686647_-,NA|70aa|down_2|CP031742.1_5686802_5687012_-,NA|134aa|down_9|CP031742.1_5694641_5695043_-	NA|72aa|up_9|CP031742.1_5672690_5672906_+	NA	NA|234aa|up_8|CP031742.1_5672982_5673684_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|207aa|up_7|CP031742.1_5673875_5674496_-	pfam11241, DUF3043, Protein of unknown function (DUF3043)	NA|259aa|up_6|CP031742.1_5674781_5675558_+	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|93aa|up_5|CP031742.1_5675575_5675854_+	NA	NA|440aa|up_4|CP031742.1_5676026_5677346_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|228aa|up_3|CP031742.1_5677342_5678026_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|1063aa|up_2|CP031742.1_5678290_5681479_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|401aa|up_1|CP031742.1_5681638_5682841_-	PRK09375, PRK09375, quinolinate synthase NadA	NA|119aa|up_0|CP031742.1_5683154_5683511_+	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein	NA|343aa|down_0|CP031742.1_5684042_5685071_-	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]	NA|482aa|down_1|CP031742.1_5685201_5686647_-	NA	NA|70aa|down_2|CP031742.1_5686802_5687012_-	NA	NA|325aa|down_3|CP031742.1_5687187_5688162_+	cd01942, ribokinase_group_A, Ribokinase-like subgroup A	NA|459aa|down_4|CP031742.1_5688210_5689587_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|322aa|down_5|CP031742.1_5690024_5690990_+	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]	NA|579aa|down_6|CP031742.1_5690986_5692723_+	cd01662, Ubiquinol_Oxidase_I, Ubiquinol oxidase subunit I	NA|133aa|down_7|CP031742.1_5692719_5693118_+	pfam12270, Cyt_c_ox_IV, Cytochrome c oxidase subunit IV	NA|407aa|down_8|CP031742.1_5693299_5694520_+	pfam17964, Big_10, Bacterial Ig domain	NA|134aa|down_9|CP031742.1_5694641_5695043_-	NA
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	32	5723596-5723680	28	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	TGGCCTCAGGCGCCGGCCGGGCT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|394aa|up_8|CP031742.1_5713512_5714694_+,NA|182aa|down_0|CP031742.1_5723819_5724365_+,NA|202aa|down_4|CP031742.1_5738965_5739571_-	NA|342aa|up_9|CP031742.1_5712447_5713473_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|394aa|up_8|CP031742.1_5713512_5714694_+	NA	NA|428aa|up_7|CP031742.1_5714650_5715934_-	pfam09594, GT87, Glycosyltransferase family 87	NA|381aa|up_6|CP031742.1_5716052_5717195_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|599aa|up_5|CP031742.1_5717281_5719078_-	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases	NA|257aa|up_4|CP031742.1_5719357_5720128_+	cd07392, MPP_PAE1087, Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain	NA|149aa|up_3|CP031742.1_5720277_5720724_+	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|397aa|up_2|CP031742.1_5720773_5721964_+	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|159aa|up_1|CP031742.1_5722039_5722516_+	pfam17230, DUF5304, Family of unknown function (DUF5304)	NA|314aa|up_0|CP031742.1_5722595_5723537_+	TIGR00744, Glucokinase_Glucose_kinase	NA|182aa|down_0|CP031742.1_5723819_5724365_+	NA	NA|2096aa|down_1|CP031742.1_5727202_5733490_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|1030aa|down_2|CP031742.1_5733883_5736973_+	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|261aa|down_3|CP031742.1_5738152_5738935_+	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family	NA|202aa|down_4|CP031742.1_5738965_5739571_-	NA	NA|263aa|down_5|CP031742.1_5739563_5740352_-	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|263aa|down_6|CP031742.1_5740578_5741367_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|403aa|down_7|CP031742.1_5741485_5742694_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|224aa|down_8|CP031742.1_5742732_5743404_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|335aa|down_9|CP031742.1_5743460_5744465_+	cd12183, LDH_like_2, D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	33	5807587-5807694	29	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	TGGCCTCAAGCGCCGGCCGGGCTGT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|231aa|up_0|CP031742.1_5806694_5807387_-,NA|212aa|down_4|CP031742.1_5815711_5816347_+,NA|346aa|down_7|CP031742.1_5817662_5818700_-,NA|524aa|down_8|CP031742.1_5818859_5820431_-	NA|154aa|up_9|CP031742.1_5796895_5797357_+	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms]	NA|204aa|up_8|CP031742.1_5797491_5798103_+	PRK14764, PRK14764, lipoprotein signal peptidase; Provisional	NA|315aa|up_7|CP031742.1_5798185_5799130_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|162aa|up_6|CP031742.1_5799164_5799650_+	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|529aa|up_5|CP031742.1_5799780_5801367_+	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309	NA|190aa|up_4|CP031742.1_5801626_5802196_+	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|580aa|up_3|CP031742.1_5802210_5803950_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|549aa|up_2|CP031742.1_5804011_5805658_-	COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]	NA|273aa|up_1|CP031742.1_5805784_5806603_-	pfam13462, Thioredoxin_4, Thioredoxin	NA|231aa|up_0|CP031742.1_5806694_5807387_-	NA	NA|1183aa|down_0|CP031742.1_5808387_5811936_+	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated	NA|410aa|down_1|CP031742.1_5812441_5813671_+	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins	NA|338aa|down_2|CP031742.1_5813751_5814765_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|267aa|down_3|CP031742.1_5814842_5815643_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|212aa|down_4|CP031742.1_5815711_5816347_+	NA	NA|165aa|down_5|CP031742.1_5816381_5816876_-	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|252aa|down_6|CP031742.1_5816895_5817651_-	pfam02190, LON_substr_bdg, ATP-dependent protease La (LON) substrate-binding domain	NA|346aa|down_7|CP031742.1_5817662_5818700_-	NA	NA|524aa|down_8|CP031742.1_5818859_5820431_-	NA	NA|441aa|down_9|CP031742.1_5820658_5821981_+	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	34	6486236-6486337	30	CRISPRCasFinder	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	CGGGCTGTTCTGCCGGGCTCCGTC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA|81aa|up_2|CP031742.1_6484708_6484951_-,NA|143aa|up_1|CP031742.1_6485072_6485501_-,NA|65aa|down_9|CP031742.1_6497185_6497380_-	NA|91aa|up_9|CP031742.1_6475583_6475856_+	cd11547, NTP-PPase_HisE, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|286aa|up_8|CP031742.1_6475927_6476785_+	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed	NA|156aa|up_7|CP031742.1_6476817_6477285_+	pfam10756, bPH_6, Bacterial PH domain	NA|623aa|up_6|CP031742.1_6477325_6479194_-	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|454aa|up_5|CP031742.1_6480517_6481879_+	cd02549, Peptidase_C39A, A sub-family of peptidase family C39	NA|420aa|up_4|CP031742.1_6481949_6483209_-	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites	NA|391aa|up_3|CP031742.1_6483573_6484746_+	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|81aa|up_2|CP031742.1_6484708_6484951_-	NA	NA|143aa|up_1|CP031742.1_6485072_6485501_-	NA	NA|147aa|up_0|CP031742.1_6485764_6486205_+	smart00344, HTH_ASNC, helix_turn_helix ASNC type	NA|551aa|down_0|CP031742.1_6486735_6488388_+	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]	NA|263aa|down_1|CP031742.1_6488916_6489705_+	cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1	NA|192aa|down_2|CP031742.1_6489767_6490343_+	pfam04186, FxsA, FxsA cytoplasmic membrane protein	NA|125aa|down_3|CP031742.1_6490448_6490823_-	pfam13397, RbpA, RNA polymerase-binding protein	NA|451aa|down_4|CP031742.1_6491077_6492430_-	cd17482, MFS_YxiO_like, Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major Facilitator Superfamily	NA|259aa|down_5|CP031742.1_6492466_6493243_-	cd08561, GDPD_cytoplasmic_ScUgpQ2_like, Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins	NA|218aa|down_6|CP031742.1_6493239_6493893_-	COG2364, COG2364, Predicted membrane protein [Function unknown]	NA|509aa|down_7|CP031742.1_6493992_6495519_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|525aa|down_8|CP031742.1_6495578_6497153_-	pfam08611, DUF1774, Fungal protein of unknown function (DUF1774)	NA|65aa|down_9|CP031742.1_6497185_6497380_-	NA
GCA_003428925.1_ASM342892v1	CP031742	Streptomyces koyangensis strain VK-A60T chromosome, complete genome	35	7160454-7160784	31,9,11	CRISPRCasFinder,CRT,PILER-CR	no		csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	Orphan	GTCGTACCCCCACGTGCGTGGGCTGTCC,GTCGTACCCCCACGTGCGTGGGCTGTCC,GTCGTACCCCCACGTGCGTGGGCTGTCC	28,28,28	0	0	NA	NA	NA:NA:NA	5,5,4	5	Orphan	csa3,RT,DEDDh,Cas14u_CAS-V,DinG,cas3,PD-DExK,WYL,cas3HD,cas8e,cse2gr11,cas7,cas5,cas6e,c2c9_V-U4,Cas9_archaeal,cas4	NA,NA|61aa|down_0|CP031742.1_7161249_7161432_-,NA|61aa|down_5|CP031742.1_7166014_7166197_+	NA|493aa|up_9|CP031742.1_7138268_7139747_+	cd17631, FACL_FadD13-like, fatty acyl-CoA synthetase, including FadD13	NA|409aa|up_8|CP031742.1_7139850_7141077_-	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	NA|1274aa|up_7|CP031742.1_7141125_7144947_-	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|2898aa|up_6|CP031742.1_7144939_7153633_-	PRK12467, PRK12467, peptide synthase; Provisional	NA|437aa|up_5|CP031742.1_7154200_7155511_+	PRK09294, PRK09294, phthiocerol/phthiodiolone dimycocerosyl transferase	NA|174aa|up_4|CP031742.1_7155566_7156088_+	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional	NA|286aa|up_3|CP031742.1_7156643_7157501_+	TIGR03384, betaine_BetI, transcriptional repressor BetI	NA|298aa|up_2|CP031742.1_7157568_7158462_+	pfam05853, BKACE, beta-keto acid cleavage enzyme	NA|319aa|up_1|CP031742.1_7158548_7159505_+	PRK07066, PRK07066, L-carnitine dehydrogenase	NA|160aa|up_0|CP031742.1_7159501_7159981_+	PRK07531, PRK07531, carnitine 3-dehydrogenase	NA|61aa|down_0|CP031742.1_7161249_7161432_-	NA	NA|386aa|down_1|CP031742.1_7161428_7162586_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|270aa|down_2|CP031742.1_7162682_7163491_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|386aa|down_3|CP031742.1_7163557_7164715_+	pfam13546, DDE_5, DDE superfamily endonuclease	NA|402aa|down_4|CP031742.1_7164771_7165976_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|61aa|down_5|CP031742.1_7166014_7166197_+	NA	NA|141aa|down_6|CP031742.1_7166257_7166680_-	sd00045, ANK, ankyrin repeats	NA|415aa|down_7|CP031742.1_7167282_7168526_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|674aa|down_8|CP031742.1_7169613_7171635_+	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|313aa|down_9|CP031742.1_7171691_7172630_-	PRK15442, PRK15442, beta-lactamase TEM; Provisional
