assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003408635.1_ASM340863v1	CP031606	Pseudomonas sp. phDV1 chromosome, complete genome	1	880693-882797	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	RT,csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PD-DExK,DinG,WYL,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Type I-E	GTGTTCCCCGCGCCAGCGGGGATGAACC,GTGTTCCCCGCGCCAGCGGGGATGAACCG,GTGTTCCCCGCGCCAGCGGGGATGAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	34,34,34	34	TypeI-E	RT,csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PD-DExK,DinG,WYL,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|430aa|up_9|CP031606.1_866832_868122_-	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase	NA|210aa|up_8|CP031606.1_868144_868774_-	PRK00043, thiE, thiamine phosphate synthase	NA|266aa|up_7|CP031606.1_868770_869568_-	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|387aa|up_6|CP031606.1_869711_870872_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|249aa|up_5|CP031606.1_870962_871709_+	TIGR03950, hypothetical_protein, siderophore ferric iron reductase, AHA_1954 family	NA|256aa|up_4|CP031606.1_871702_872470_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|659aa|up_3|CP031606.1_872472_874449_+	PRK10577, PRK10577, Fe(3+)-hydroxamate ABC transporter permease FhuB	NA|297aa|up_2|CP031606.1_874589_875480_+	PRK10576, PRK10576, Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD	NA|214aa|up_1|CP031606.1_878319_878961_+	PRK14996, PRK14996, TetR family transcriptional regulator; Provisional	NA|550aa|up_0|CP031606.1_878957_880607_+	PRK11561, PRK11561, isovaleryl CoA dehydrogenase; Provisional	cas3|886aa|down_0|CP031606.1_883005_885663_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|94aa|down_1|CP031606.1_885665_885947_-	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|97aa|down_2|CP031606.1_885943_886234_-	COG3905, COG3905, Predicted transcriptional regulator [Transcription]	NA|84aa|down_3|CP031606.1_886499_886751_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|142aa|down_4|CP031606.1_886750_887176_+	cd18746, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	cas8e|512aa|down_5|CP031606.1_887285_888821_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|181aa|down_6|CP031606.1_888817_889360_+	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas7|381aa|down_7|CP031606.1_889370_890513_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|221aa|down_8|CP031606.1_890515_891178_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|205aa|down_9|CP031606.1_891152_891767_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e
GCA_003408635.1_ASM340863v1	CP031606	Pseudomonas sp. phDV1 chromosome, complete genome	2	893909-898027	2,2,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh	RT,csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PD-DExK,DinG,WYL,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Type I-E	GTGTTCCCCGCGCCAGCGGGGATGAACCG,GTGTTCCCCGCGCCAGCGGGGATGAACCG,GTGTTCCCCGCGCCAGCGGGGATGAACCG,GTGTTCCCCGCGCCAGCGGGGATGAACCG	29,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E	65,67,67,65	67	TypeI-E	RT,csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PD-DExK,DinG,WYL,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA,NA|140aa|down_9|CP031606.1_906582_907002_-	NA|84aa|up_9|CP031606.1_886499_886751_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|142aa|up_8|CP031606.1_886750_887176_+	cd18746, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	cas8e|512aa|up_7|CP031606.1_887285_888821_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|181aa|up_6|CP031606.1_888817_889360_+	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas7|381aa|up_5|CP031606.1_889370_890513_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|221aa|up_4|CP031606.1_890515_891178_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|205aa|up_3|CP031606.1_891152_891767_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	NA|274aa|up_2|CP031606.1_891792_892614_+	pfam04383, KilA-N, KilA-N domain	cas1|296aa|up_1|CP031606.1_892655_893543_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|100aa|up_0|CP031606.1_893542_893842_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|228aa|down_0|CP031606.1_898322_899006_+	pfam01891, CbiM, Cobalt uptake substrate-specific transmembrane region	NA|491aa|down_1|CP031606.1_899103_900576_+	PRK08292, PRK08292, AMP nucleosidase; Provisional	NA|148aa|down_2|CP031606.1_901441_901885_-	PRK10514, PRK10514, putative acetyltransferase; Provisional	NA|344aa|down_3|CP031606.1_902097_903129_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|207aa|down_4|CP031606.1_903251_903872_+	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE	NA|131aa|down_5|CP031606.1_904080_904473_-	cd01040, Mb-like, myoglobin-like; M family globin domain	NA|73aa|down_6|CP031606.1_904556_904775_-	pfam10981, DUF2788, Protein of unknown function (DUF2788)	NA|160aa|down_7|CP031606.1_904867_905347_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|294aa|down_8|CP031606.1_905696_906578_-	PRK09509, fieF, CDF family cation-efflux pump FieF	NA|140aa|down_9|CP031606.1_906582_907002_-	NA
GCA_003408635.1_ASM340863v1	CP031606	Pseudomonas sp. phDV1 chromosome, complete genome	3	4268402-4268502	3	CRISPRCasFinder	no		RT,csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PD-DExK,DinG,WYL,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Orphan	CCTGCCATCCCTGGCGGCAACCCT	24	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PD-DExK,DinG,WYL,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA,NA|204aa|down_1|CP031606.1_4269319_4269931_-	NA|207aa|up_9|CP031606.1_4260864_4261485_+	pfam07021, MetW, Methionine biosynthesis protein MetW	NA|139aa|up_8|CP031606.1_4261499_4261916_+	pfam14467, DUF4426, Domain of unknown function (DUF4426)	NA|199aa|up_7|CP031606.1_4262056_4262653_+	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|387aa|up_6|CP031606.1_4262649_4263810_+	PRK05660, PRK05660, radical SAM family heme chaperone HemW	NA|108aa|up_5|CP031606.1_4263897_4264221_+	pfam11872, DUF3392, Protein of unknown function (DUF3392)	NA|448aa|up_4|CP031606.1_4264455_4265799_-	pfam07044, DUF1329, Protein of unknown function (DUF1329)	NA|239aa|up_3|CP031606.1_4265980_4266697_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|265aa|up_2|CP031606.1_4266764_4267559_-	PRK00208, thiG, thiazole synthase; Reviewed	NA|67aa|up_1|CP031606.1_4267577_4267778_-	PRK05659, PRK05659, sulfur carrier protein ThiS; Validated	NA|124aa|up_0|CP031606.1_4267880_4268252_-	COG2363, COG2363, Uncharacterized small membrane protein [Function unknown]	NA|243aa|down_0|CP031606.1_4268589_4269318_+	PRK00056, mtgA, monofunctional biosynthetic peptidoglycan transglycosylase; Provisional	NA|204aa|down_1|CP031606.1_4269319_4269931_-	NA	NA|285aa|down_2|CP031606.1_4269993_4270848_-	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed	NA|339aa|down_3|CP031606.1_4270991_4272008_-	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning]	NA|223aa|down_4|CP031606.1_4272007_4272676_-	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|439aa|down_5|CP031606.1_4272672_4273989_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|145aa|down_6|CP031606.1_4274328_4274763_+	pfam04940, BLUF, Sensors of blue-light using FAD	NA|456aa|down_7|CP031606.1_4274904_4276272_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|487aa|down_8|CP031606.1_4276268_4277729_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|207aa|down_9|CP031606.1_4277728_4278349_+	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95
GCA_003408635.1_ASM340863v1	CP031606	Pseudomonas sp. phDV1 chromosome, complete genome	4	4525753-4526142	3,4	CRT,CRISPRCasFinder	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	RT,csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PD-DExK,DinG,WYL,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Type I-F	CNTCACTGCCGANTAGGCAGCTCAGAAA,TCACTGCCGAATAGGCAGCTCAGAAA	28,26	0	0	NA	NA	I-F:I-F	6,6	6	TypeI-F	RT,csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PD-DExK,DinG,WYL,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA|102aa|up_8|CP031606.1_4516125_4516431_+,NA|141aa|up_4|CP031606.1_4521835_4522258_-,NA|321aa|up_0|CP031606.1_4524526_4525489_-,NA	NA|113aa|up_9|CP031606.1_4515716_4516055_+	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]	NA|102aa|up_8|CP031606.1_4516125_4516431_+	NA	NA|751aa|up_7|CP031606.1_4516591_4518844_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|532aa|up_6|CP031606.1_4518840_4520436_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|334aa|up_5|CP031606.1_4520571_4521573_+	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|141aa|up_4|CP031606.1_4521835_4522258_-	NA	NA|354aa|up_3|CP031606.1_4522382_4523444_+	pfam10023, Aminopep, Putative aminopeptidase	NA|77aa|up_2|CP031606.1_4523507_4523738_+	pfam06649, DUF1161, Protein of unknown function (DUF1161)	NA|216aa|up_1|CP031606.1_4523813_4524461_-	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065	NA|321aa|up_0|CP031606.1_4524526_4525489_-	NA	cas1|323aa|down_0|CP031606.1_4526196_4527165_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3-cas2|1117aa|down_1|CP031606.1_4527161_4530512_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	NA|422aa|down_2|CP031606.1_4530643_4531909_-	pfam07804, HipA_C, HipA-like C-terminal domain	NA|114aa|down_3|CP031606.1_4531908_4532250_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|318aa|down_4|CP031606.1_4532576_4533530_+	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	cas8f|454aa|down_5|CP031606.1_4534078_4535440_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|334aa|down_6|CP031606.1_4535432_4536434_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|340aa|down_7|CP031606.1_4536439_4537459_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|188aa|down_8|CP031606.1_4537461_4538025_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|163aa|down_9|CP031606.1_4541713_4542202_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family
GCA_003408635.1_ASM340863v1	CP031606	Pseudomonas sp. phDV1 chromosome, complete genome	5	4538156-4541606	4,5,4,5	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	RT,csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PD-DExK,DinG,WYL,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Type I-F	GTTCACTGCCGTGTAGGCAGCTCAGAAA,GTTCACTGCCGTGTAGGCAGCTCAGAAA,GTTCACTGCCGTGTAGGCAGCTCAGAAA,GTTCACTGCCGTGTAGGCAGCTCAGAAA	28,28,28,28	0	0	NA	NA	I-F:I-F:I-F:I-F	55,57,57,55	57	TypeI-F	RT,csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PD-DExK,DinG,WYL,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA|321aa|up_9|CP031606.1_4524526_4525489_-,NA	NA|321aa|up_9|CP031606.1_4524526_4525489_-	NA	cas1|323aa|up_8|CP031606.1_4526196_4527165_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3-cas2|1117aa|up_7|CP031606.1_4527161_4530512_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	NA|422aa|up_6|CP031606.1_4530643_4531909_-	pfam07804, HipA_C, HipA-like C-terminal domain	NA|114aa|up_5|CP031606.1_4531908_4532250_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|318aa|up_4|CP031606.1_4532576_4533530_+	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	cas8f|454aa|up_3|CP031606.1_4534078_4535440_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|334aa|up_2|CP031606.1_4535432_4536434_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|340aa|up_1|CP031606.1_4536439_4537459_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|188aa|up_0|CP031606.1_4537461_4538025_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|163aa|down_0|CP031606.1_4541713_4542202_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|181aa|down_1|CP031606.1_4542210_4542753_-	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E	NA|683aa|down_2|CP031606.1_4542874_4544923_+	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP)	NA|98aa|down_3|CP031606.1_4544919_4545213_+	pfam09526, DUF2387, Probable metal-binding protein (DUF2387)	NA|264aa|down_4|CP031606.1_4545282_4546074_-	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|329aa|down_5|CP031606.1_4546155_4547142_+	pfam13593, SBF_like, SBF-like CPA transporter family (DUF4137)	NA|354aa|down_6|CP031606.1_4547217_4548279_+	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|243aa|down_7|CP031606.1_4548645_4549374_+	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|101aa|down_8|CP031606.1_4549549_4549852_-	smart00938, P-II, Nitrogen regulatory protein P-II	NA|314aa|down_9|CP031606.1_4549853_4550795_-	pfam05982, Sbt_1, Na+-dependent bicarbonate transporter superfamily
