assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003402915.1_ASM340291v1	CP031553	Pasteurella multocida strain EB168 chromosome, complete genome	1	209087-209954	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3-cas2,cas1,cas6f,cas7f,cas5f	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Unclear	TTTCTAAGCCATCTACACGATGGTGAAC,TTTCTAAGCCATCTACACGATGGTGAAC,TTTCTAAGCCATCTACACGATGGTGAAC	28,28,28	0	0	NA	NA	NA:NA:NA	14,14,14	14	Unclear	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA|197aa|up_3|CP031553.1_201990_202581_-,NA|219aa|down_5|CP031553.1_222581_223238_+,NA|75aa|down_6|CP031553.1_224923_225148_-,NA|474aa|down_7|CP031553.1_225265_226687_-	NA|108aa|up_9|CP031553.1_197377_197701_-	TIGR02011, Protein_yfhF	NA|129aa|up_8|CP031553.1_197770_198157_-	PRK11325, PRK11325, scaffold protein; Provisional	NA|405aa|up_7|CP031553.1_198388_199603_-	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|155aa|up_6|CP031553.1_199650_200115_-	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR	NA|239aa|up_5|CP031553.1_200193_200910_-	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|268aa|up_4|CP031553.1_201123_201927_+	PRK10757, PRK10757, inositol-1-monophosphatase	NA|197aa|up_3|CP031553.1_201990_202581_-	NA	NA|619aa|up_2|CP031553.1_202721_204578_-	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	cas3-cas2|1107aa|up_1|CP031553.1_204635_207956_-	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas1|327aa|up_0|CP031553.1_207936_208917_-	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas6f|187aa|down_0|CP031553.1_210094_210655_-	TIGR02563, conserved_hypothetical_protein, CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST	cas7f|336aa|down_1|CP031553.1_210657_211665_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|321aa|down_2|CP031553.1_211667_212630_-	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2	NA|403aa|down_3|CP031553.1_217813_219022_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|402aa|down_4|CP031553.1_220240_221446_-	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|219aa|down_5|CP031553.1_222581_223238_+	NA	NA|75aa|down_6|CP031553.1_224923_225148_-	NA	NA|474aa|down_7|CP031553.1_225265_226687_-	NA	NA|364aa|down_8|CP031553.1_226709_227801_-	pfam06527, TniQ, TniQ	NA|643aa|down_9|CP031553.1_228644_230573_-	pfam00665, rve, Integrase core domain
GCA_003402915.1_ASM340291v1	CP031553	Pasteurella multocida strain EB168 chromosome, complete genome	2	231230-231382	2	CRISPRCasFinder	no	cas5f,cas8f	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Type I-F	TTATGACATTTATTTCTGGTTTTTA	25	0	0	NA	NA	NA	2	2	TypeI-F	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA|219aa|up_5|CP031553.1_222581_223238_+,NA|75aa|up_4|CP031553.1_224923_225148_-,NA|474aa|up_3|CP031553.1_225265_226687_-,NA|88aa|down_8|CP031553.1_244223_244487_+,NA|282aa|down_9|CP031553.1_250375_251221_+	cas7f|336aa|up_9|CP031553.1_210657_211665_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|321aa|up_8|CP031553.1_211667_212630_-	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2	NA|403aa|up_7|CP031553.1_217813_219022_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|402aa|up_6|CP031553.1_220240_221446_-	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|219aa|up_5|CP031553.1_222581_223238_+	NA	NA|75aa|up_4|CP031553.1_224923_225148_-	NA	NA|474aa|up_3|CP031553.1_225265_226687_-	NA	NA|364aa|up_2|CP031553.1_226709_227801_-	pfam06527, TniQ, TniQ	NA|643aa|up_1|CP031553.1_228644_230573_-	pfam00665, rve, Integrase core domain	NA|221aa|up_0|CP031553.1_230562_231225_-	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal	cas8f|445aa|down_0|CP031553.1_231416_232751_-	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1	NA|720aa|down_1|CP031553.1_232981_235141_-	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|683aa|down_2|CP031553.1_235274_237323_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|371aa|down_3|CP031553.1_237504_238617_+	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|90aa|down_4|CP031553.1_238755_239025_-	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|968aa|down_5|CP031553.1_239191_242095_-	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|172aa|down_6|CP031553.1_242136_242652_-	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ	NA|164aa|down_7|CP031553.1_242667_243159_-	COG3721, HugX, Putative heme iron utilization protein [Inorganic ion transport and metabolism]	NA|88aa|down_8|CP031553.1_244223_244487_+	NA	NA|282aa|down_9|CP031553.1_250375_251221_+	NA
GCA_003402915.1_ASM340291v1	CP031553	Pasteurella multocida strain EB168 chromosome, complete genome	3	763254-764601	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Unclear	TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAAC	28,28,28	3	3	764362-764393|764422-764453|764482-764513	CP031553.1_997532-997501|CP031553.1_887170-887139|CP031553.1_1634421-1634390	I-F:I-F:I-F	22,22,21	22	Unclear	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA,NA	NA|468aa|up_9|CP031553.1_751639_753043_-	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]	NA|240aa|up_8|CP031553.1_753054_753774_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|529aa|up_7|CP031553.1_753851_755438_-	COG1620, LldP, L-lactate permease [Energy production and conversion]	NA|456aa|up_6|CP031553.1_755796_757164_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|204aa|up_5|CP031553.1_757191_757803_-	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only]	NA|309aa|up_4|CP031553.1_757988_758915_+	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional	NA|475aa|up_3|CP031553.1_759177_760602_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|136aa|up_2|CP031553.1_760717_761125_+	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and    metabolism]	NA|349aa|up_1|CP031553.1_761193_762240_+	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF	NA|322aa|up_0|CP031553.1_762236_763202_+	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	cas3|443aa|down_0|CP031553.1_764748_766077_-	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|238aa|down_1|CP031553.1_766188_766902_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|235aa|down_2|CP031553.1_766949_767654_-	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism]	NA|968aa|down_3|CP031553.1_767929_770833_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_4|CP031553.1_770913_771573_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|190aa|down_5|CP031553.1_771636_772206_+	pfam04220, YihI, Der GTPase activator (YihI)	NA|143aa|down_6|CP031553.1_772211_772640_+	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|456aa|down_7|CP031553.1_772663_774031_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|223aa|down_8|CP031553.1_774071_774740_+	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|112aa|down_9|CP031553.1_774835_775171_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCA_003402915.1_ASM340291v1	CP031553	Pasteurella multocida strain EB168 chromosome, complete genome	4	1090316-1090468	4	CRISPRCasFinder	no		cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Orphan	TAAAAACTAGAAATAAATGTCATAA	25	0	0	NA	NA	NA	2	2	Orphan	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA|229aa|up_1|CP031553.1_1085782_1086469_+,NA|486aa|down_2|CP031553.1_1094974_1096432_+,NA|75aa|down_3|CP031553.1_1096549_1096774_+,NA|219aa|down_4|CP031553.1_1098462_1099119_-	NA|384aa|up_9|CP031553.1_1075573_1076725_-	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|330aa|up_8|CP031553.1_1077188_1078178_+	cd13547, PBP2_Fbp_like_2, Substrate binding domain of an uncharacterized ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|363aa|up_7|CP031553.1_1078192_1079281_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|565aa|up_6|CP031553.1_1079283_1080978_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|353aa|up_5|CP031553.1_1080999_1082058_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|228aa|up_4|CP031553.1_1082827_1083511_-	PRK14118, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA|424aa|up_3|CP031553.1_1083651_1084923_+	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|281aa|up_2|CP031553.1_1084919_1085762_+	COG2861, COG2861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|229aa|up_1|CP031553.1_1085782_1086469_+	NA	NA|854aa|up_0|CP031553.1_1086575_1089137_-	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|221aa|down_0|CP031553.1_1090472_1091135_+	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal	NA|374aa|down_1|CP031553.1_1093892_1095014_+	pfam06527, TniQ, TniQ	NA|486aa|down_2|CP031553.1_1094974_1096432_+	NA	NA|75aa|down_3|CP031553.1_1096549_1096774_+	NA	NA|219aa|down_4|CP031553.1_1098462_1099119_-	NA	NA|408aa|down_5|CP031553.1_1100252_1101476_+	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|223aa|down_6|CP031553.1_1101569_1102238_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|403aa|down_7|CP031553.1_1102676_1103885_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|955aa|down_8|CP031553.1_1104279_1107144_-	PRK11054, helD, DNA helicase IV; Provisional	NA|206aa|down_9|CP031553.1_1110854_1111472_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed
