assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003368045.1_ASM336804v1	CP012206	Campylobacter jejuni strain CJ067CC45, complete genome	1	1178369-1178603	1,1	PILER-CR,CRISPRCasFinder	no	cas4	DEDDh,WYL,cas4,cas9,cas2,cas1,csa3	Unclear	TCAACTTTAGCAATATTTTACCATATAAACAATTAATAATAGGCTAAAACATTTTGTTTA,ATTTTATCATATAAACAATTAATAATAGGCTAAAAC	60,36	0	0	NA	NA	NA:NA	2,3	3	Unclear	DEDDh,WYL,cas4,cas9,cas2,cas1,csa3	NA|111aa|up_3|CP012206.1_1176297_1176630_+,NA|77aa|up_1|CP012206.1_1177840_1178071_+,NA|416aa|down_2|CP012206.1_1181768_1183016_-,NA|158aa|down_3|CP012206.1_1183018_1183492_-,NA|195aa|down_4|CP012206.1_1183535_1184120_-,NA|205aa|down_6|CP012206.1_1185865_1186480_-,NA|121aa|down_7|CP012206.1_1187171_1187534_-,NA|84aa|down_8|CP012206.1_1187536_1187788_-,NA|61aa|down_9|CP012206.1_1187895_1188078_-	NA|222aa|up_9|CP012206.1_1169468_1170134_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|393aa|up_8|CP012206.1_1170203_1171382_-	PRK14121, PRK14121, tRNA (guanine-N(7)-)-methyltransferase; Provisional	NA|411aa|up_7|CP012206.1_1171381_1172614_-	COG3401, COG3401, Fibronectin type 3 domain-containing protein [General function prediction only]	NA|323aa|up_6|CP012206.1_1172561_1173530_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|367aa|up_5|CP012206.1_1173607_1174708_+	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|400aa|up_4|CP012206.1_1175058_1176258_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|111aa|up_3|CP012206.1_1176297_1176630_+	NA	NA|313aa|up_2|CP012206.1_1176672_1177611_-	TIGR02225, Tyrosine_recombinase_XerD, tyrosine recombinase XerD	NA|77aa|up_1|CP012206.1_1177840_1178071_+	NA	NA|76aa|up_0|CP012206.1_1178083_1178311_+	cd07996, WGR_MMR_like, WGR domain of molybdate metabolism regulator and related proteins	NA|166aa|down_0|CP012206.1_1179720_1180218_-	PTZ00077, PTZ00077, asparagine synthetase-like protein; Provisional	NA|389aa|down_1|CP012206.1_1180542_1181709_-	TIGR01391, DNA_primase, DNA primase, catalytic core	NA|416aa|down_2|CP012206.1_1181768_1183016_-	NA	NA|158aa|down_3|CP012206.1_1183018_1183492_-	NA	NA|195aa|down_4|CP012206.1_1183535_1184120_-	NA	NA|522aa|down_5|CP012206.1_1184214_1185780_-	pfam13708, DUF4942, Domain of unknown function (DUF4942)	NA|205aa|down_6|CP012206.1_1185865_1186480_-	NA	NA|121aa|down_7|CP012206.1_1187171_1187534_-	NA	NA|84aa|down_8|CP012206.1_1187536_1187788_-	NA	NA|61aa|down_9|CP012206.1_1187895_1188078_-	NA
GCA_003368045.1_ASM336804v1	CP012206	Campylobacter jejuni strain CJ067CC45, complete genome	2	1211349-1211450	2	CRISPRCasFinder	no	cas4,cas9	DEDDh,WYL,cas4,cas9,cas2,cas1,csa3	Type II-A,Type II-B,Type II-C	TATTTTACCATATAAACAATTAATAATAGGCTAAAA	36	0	0	NA	NA	NA	1	1	TypeII-A,TypeII-B,TypeII-C	DEDDh,WYL,cas4,cas9,cas2,cas1,csa3	NA|230aa|up_9|CP012206.1_1200418_1201108_+,NA|268aa|up_8|CP012206.1_1201395_1202199_+,NA|99aa|up_4|CP012206.1_1206277_1206574_+,NA|90aa|up_1|CP012206.1_1208141_1208411_+,NA|107aa|down_0|CP012206.1_1211471_1211792_-,NA|114aa|down_1|CP012206.1_1211781_1212123_-,NA|149aa|down_2|CP012206.1_1212124_1212571_-,NA|132aa|down_3|CP012206.1_1212560_1212956_-,NA|131aa|down_4|CP012206.1_1212957_1213350_-,NA|76aa|down_6|CP012206.1_1215705_1215933_-,NA|163aa|down_7|CP012206.1_1215960_1216449_-,NA|166aa|down_8|CP012206.1_1216467_1216965_-,NA|176aa|down_9|CP012206.1_1217227_1217755_-	NA|230aa|up_9|CP012206.1_1200418_1201108_+	NA	NA|268aa|up_8|CP012206.1_1201395_1202199_+	NA	NA|95aa|up_7|CP012206.1_1202216_1202501_+	smart01040, Bro-N, BRO family, N-terminal domain	NA|456aa|up_6|CP012206.1_1202515_1203883_+	TIGR03743, SXT_TraD, conjugative coupling factor TraD, SXT/TOL subfamily	NA|802aa|up_5|CP012206.1_1203875_1206281_+	TIGR01596, CRISPR-associated_endonuclease_Cas3-HD, CRISPR-associated endonuclease Cas3-HD	NA|99aa|up_4|CP012206.1_1206277_1206574_+	NA	NA|147aa|up_3|CP012206.1_1206570_1207011_+	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins	NA|299aa|up_2|CP012206.1_1207029_1207926_+	COG1639, COG1639, Predicted signal transduction protein [Signal transduction mechanisms]	NA|90aa|up_1|CP012206.1_1208141_1208411_+	NA	cas9|966aa|up_0|CP012206.1_1208391_1211289_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|107aa|down_0|CP012206.1_1211471_1211792_-	NA	NA|114aa|down_1|CP012206.1_1211781_1212123_-	NA	NA|149aa|down_2|CP012206.1_1212124_1212571_-	NA	NA|132aa|down_3|CP012206.1_1212560_1212956_-	NA	NA|131aa|down_4|CP012206.1_1212957_1213350_-	NA	NA|335aa|down_5|CP012206.1_1214039_1215044_-	pfam05816, TelA, Toxic anion resistance protein (TelA)	NA|76aa|down_6|CP012206.1_1215705_1215933_-	NA	NA|163aa|down_7|CP012206.1_1215960_1216449_-	NA	NA|166aa|down_8|CP012206.1_1216467_1216965_-	NA	NA|176aa|down_9|CP012206.1_1217227_1217755_-	NA
GCA_003368045.1_ASM336804v1	CP012206	Campylobacter jejuni strain CJ067CC45, complete genome	3	1236073-1236160	3	CRISPRCasFinder	no		DEDDh,WYL,cas4,cas9,cas2,cas1,csa3	Orphan	TATTTTATCATACAAACAATTAA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas4,cas9,cas2,cas1,csa3	NA|82aa|up_9|CP012206.1_1227539_1227785_+,NA|283aa|up_3|CP012206.1_1232965_1233814_+,NA|299aa|down_0|CP012206.1_1236462_1237359_-,NA|78aa|down_1|CP012206.1_1238018_1238252_+,NA|107aa|down_3|CP012206.1_1238659_1238980_+,NA|205aa|down_6|CP012206.1_1244145_1244760_-,NA|119aa|down_7|CP012206.1_1244746_1245103_-,NA|397aa|down_8|CP012206.1_1245090_1246281_-	NA|82aa|up_9|CP012206.1_1227539_1227785_+	NA	NA|257aa|up_8|CP012206.1_1228835_1229606_+	pfam13728, TraF, F plasmid transfer operon protein	NA|225aa|up_7|CP012206.1_1229618_1230293_+	TIGR02743, hypothetical_protein, type-F conjugative transfer system protein TraW	NA|333aa|up_6|CP012206.1_1230312_1231311_+	pfam06834, TraU, TraU protein	NA|221aa|up_5|CP012206.1_1231333_1231996_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|315aa|up_4|CP012206.1_1232011_1232956_+	pfam09673, TrbC_Ftype, Type-F conjugative transfer system pilin assembly protein	NA|283aa|up_3|CP012206.1_1232965_1233814_+	NA	NA|261aa|up_2|CP012206.1_1233800_1234583_+	pfam05818, TraT, Enterobacterial TraT complement resistance protein	NA|143aa|up_1|CP012206.1_1234595_1235024_+	COG2143, COG2143, Thioredoxin-related protein [Posttranslational modification, protein turnover, chaperones]	NA|336aa|up_0|CP012206.1_1235025_1236033_+	pfam12873, DUF3825, Domain of unknown function (DUF3825)	NA|299aa|down_0|CP012206.1_1236462_1237359_-	NA	NA|78aa|down_1|CP012206.1_1238018_1238252_+	NA	NA|94aa|down_2|CP012206.1_1238252_1238534_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|107aa|down_3|CP012206.1_1238659_1238980_+	NA	NA|903aa|down_4|CP012206.1_1239006_1241715_-	pfam07916, TraG_N, TraG-like protein, N-terminal region	NA|722aa|down_5|CP012206.1_1241983_1244149_-	PRK12355, PRK12355, type-F conjugative transfer system mating-pair stabilization protein TraN	NA|205aa|down_6|CP012206.1_1244145_1244760_-	NA	NA|119aa|down_7|CP012206.1_1244746_1245103_-	NA	NA|397aa|down_8|CP012206.1_1245090_1246281_-	NA	NA|489aa|down_9|CP012206.1_1246289_1247756_-	pfam06122, TraH, Conjugative relaxosome accessory transposon protein
GCA_003368045.1_ASM336804v1	CP012206	Campylobacter jejuni strain CJ067CC45, complete genome	5	1469084-1469316	5,1,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	DEDDh,WYL,cas4,cas9,cas2,cas1,csa3	Type II-C, Type II-B,Type II-A,Type II-B, or Type II-C?	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT,GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT,ATTTTACCATAAAGAAATTTAAAAAGGGACTAAAAC	36,36,36	2	2	1469120-1469149|1469121-1469150	CP012206.1_1725046-1725017|CP012206.1_1725046-1725017	NA:NA:NA	3,3,3	3	TypeII-C,TypeII-B,TypeII-A,TypeII-B,orTypeII-C?	DEDDh,WYL,cas4,cas9,cas2,cas1,csa3	NA,NA	NA|214aa|up_9|CP012206.1_1459665_1460307_-	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family	NA|738aa|up_8|CP012206.1_1460303_1462517_-	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|181aa|up_7|CP012206.1_1462565_1463108_-	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|64aa|up_6|CP012206.1_1463107_1463299_-	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional	NA|234aa|up_5|CP012206.1_1463273_1463975_-	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only]	NA|383aa|up_4|CP012206.1_1464290_1465439_-	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase	NA|514aa|up_3|CP012206.1_1465562_1467104_+	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|74aa|up_2|CP012206.1_1467105_1467327_+	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism]	NA|149aa|up_1|CP012206.1_1467327_1467774_+	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|397aa|up_0|CP012206.1_1467777_1468968_+	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism]	cas2|144aa|down_0|CP012206.1_1469461_1469893_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|297aa|down_1|CP012206.1_1469885_1470776_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|985aa|down_2|CP012206.1_1470772_1473727_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|486aa|down_3|CP012206.1_1473933_1475391_+	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion]	NA|326aa|down_4|CP012206.1_1475415_1476393_-	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins	NA|330aa|down_5|CP012206.1_1476452_1477442_-	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|202aa|down_6|CP012206.1_1477502_1478108_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|250aa|down_7|CP012206.1_1478104_1478854_+	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|245aa|down_8|CP012206.1_1478828_1479563_+	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only]	NA|346aa|down_9|CP012206.1_1479559_1480597_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]
GCA_003368045.1_ASM336804v1	CP012206	Campylobacter jejuni strain CJ067CC45, complete genome	6	1712459-1712545	6	CRISPRCasFinder	no		DEDDh,WYL,cas4,cas9,cas2,cas1,csa3	Orphan	ATTATACCGACATTTTGCGACTTATA	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas4,cas9,cas2,cas1,csa3	NA|139aa|up_9|CP012206.1_1703924_1704341_-,NA|132aa|up_8|CP012206.1_1704412_1704808_-,NA|73aa|up_7|CP012206.1_1704876_1705095_-,NA|102aa|up_6|CP012206.1_1705106_1705412_-,NA|115aa|up_5|CP012206.1_1705425_1705770_-,NA|142aa|up_4|CP012206.1_1706224_1706650_-,NA|240aa|up_3|CP012206.1_1707887_1708607_-,NA|210aa|down_1|CP012206.1_1713677_1714307_-,NA|78aa|down_3|CP012206.1_1715463_1715697_-,NA|106aa|down_4|CP012206.1_1715790_1716108_-,NA|137aa|down_5|CP012206.1_1716119_1716530_-,NA|175aa|down_6|CP012206.1_1716526_1717051_-,NA|122aa|down_8|CP012206.1_1717887_1718253_-	NA|139aa|up_9|CP012206.1_1703924_1704341_-	NA	NA|132aa|up_8|CP012206.1_1704412_1704808_-	NA	NA|73aa|up_7|CP012206.1_1704876_1705095_-	NA	NA|102aa|up_6|CP012206.1_1705106_1705412_-	NA	NA|115aa|up_5|CP012206.1_1705425_1705770_-	NA	NA|142aa|up_4|CP012206.1_1706224_1706650_-	NA	NA|240aa|up_3|CP012206.1_1707887_1708607_-	NA	NA|261aa|up_2|CP012206.1_1708637_1709420_-	pfam07424, TrbM, TrbM	NA|318aa|up_1|CP012206.1_1709534_1710488_-	pfam07996, T4SS, Type IV secretion system proteins	NA|374aa|up_0|CP012206.1_1710484_1711606_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|275aa|down_0|CP012206.1_1712822_1713647_+	pfam01051, Rep_3, Initiator Replication protein	NA|210aa|down_1|CP012206.1_1713677_1714307_-	NA	NA|223aa|down_2|CP012206.1_1714316_1714985_-	cd02042, ParAB_family, partition proteins ParAB family	NA|78aa|down_3|CP012206.1_1715463_1715697_-	NA	NA|106aa|down_4|CP012206.1_1715790_1716108_-	NA	NA|137aa|down_5|CP012206.1_1716119_1716530_-	NA	NA|175aa|down_6|CP012206.1_1716526_1717051_-	NA	NA|153aa|down_7|CP012206.1_1717413_1717872_-	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB)	NA|122aa|down_8|CP012206.1_1717887_1718253_-	NA	NA|656aa|down_9|CP012206.1_1718459_1720427_-	COG0550, TopA, Topoisomerase IA [DNA replication, recombination, and repair]
