The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	451072	520450	5518379	integrase,terminase,tRNA,tail,protease,capsid,head,portal	uncultured_Caudovirales_phage(61.11%)	75	468680:468697	484675:484692
AXK94973.1|451072_452020_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	37.2	2.2e-07
AXK94974.1|452034_452544_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.3	2.6e-18
AXK94975.1|452672_453797_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
AXK94976.1|453768_454242_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
AXK94977.1|454267_454810_+	hypothetical protein	NA	NA	NA	NA	NA
AXK94978.1|454814_455387_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA	NA
AXK94979.1|455390_456209_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
AXK94980.1|456205_456463_+	DUF1488 domain-containing protein	NA	NA	NA	NA	NA
AXK99683.1|456438_456993_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
AXK94981.1|462788_463010_-	hypothetical protein	NA	NA	NA	NA	NA
AXK94982.1|463303_466414_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AXK94983.1|466426_467566_-	MexX family efflux pump subunit	NA	NA	NA	NA	NA
AXK94984.1|467944_468595_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA	NA
468680:468697	attL	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
AXK94985.1|468870_470097_+|integrase	integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	62.2	1.8e-150
AXK94986.1|470189_471131_+	hypothetical protein	NA	NA	NA	NA	NA
AXK94987.1|471312_471597_+	transcriptional regulator	NA	NA	NA	NA	NA
AXK94988.1|471607_472387_+	hypothetical protein	NA	Q8HA02	Enterobacteria_phage	51.5	6.2e-40
AXK94989.1|472510_472705_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
AXK99684.1|472928_473108_+	host cell division inhibitor Icd-like protein	NA	A0A2H4JGW3	uncultured_Caudovirales_phage	94.9	2.6e-26
AXK94990.1|473100_473289_+	hypothetical protein	NA	NA	NA	NA	NA
AXK94991.1|473281_473596_+	hypothetical protein	NA	NA	NA	NA	NA
AXK94992.1|473592_473961_+	hypothetical protein	NA	A0A2H4JCX7	uncultured_Caudovirales_phage	81.1	3.7e-51
AXK94993.1|473957_474323_+	hypothetical protein	NA	NA	NA	NA	NA
AXK94994.1|474322_476458_+	DNA primase	NA	A0A1W6JPG0	Morganella_phage	62.4	3.4e-205
AXK94995.1|476800_477136_+	hypothetical protein	NA	NA	NA	NA	NA
AXK94996.1|477184_477697_-	hypothetical protein	NA	NA	NA	NA	NA
AXK94997.1|477960_479127_+|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	95.9	9.8e-207
AXK94998.1|479178_479739_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	95.7	1.2e-98
AXK94999.1|479740_480982_+|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	96.5	1.0e-230
AXK95000.1|480978_481314_+|head,tail	head-tail adaptor	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	57.8	3.7e-26
AXK95001.1|481310_481610_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JD08	uncultured_Caudovirales_phage	80.8	3.4e-39
AXK95002.1|481609_482053_+	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	91.8	2.8e-77
AXK95003.1|482179_482371_+|terminase	terminase	terminase	NA	NA	NA	NA
AXK95004.1|482328_482685_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	99.2	5.5e-60
AXK95005.1|482668_484330_+|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	98.0	0.0e+00
AXK95006.1|484332_484524_+	hypothetical protein	NA	NA	NA	NA	NA
AXK95007.1|484677_484974_-	Fis family transcriptional regulator	NA	NA	NA	NA	NA
484675:484692	attR	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
AXK95008.1|484998_485964_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AXK95009.1|486121_486316_-	hypothetical protein	NA	NA	NA	NA	NA
AXK95010.1|486321_487203_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
AXK95011.1|487214_488666_-	sodium/panthothenate symporter	NA	NA	NA	NA	NA
AXK95012.1|488655_488898_-	hypothetical protein	NA	NA	NA	NA	NA
AXK95013.1|489008_490358_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AXK95014.1|490368_490836_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AXK95015.1|490858_491311_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
AXK95016.1|491534_492143_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
AXK95017.1|492142_493144_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
AXK95018.1|493372_493564_+	hypothetical protein	NA	NA	NA	NA	NA
AXK95019.1|493643_495584_+	RNase E specificity factor CsrD	NA	NA	NA	NA	NA
AXK95020.1|495705_495912_-	hypothetical protein	NA	NA	NA	NA	NA
AXK95021.1|495889_496933_+	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
AXK95022.1|497003_497996_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
AXK95023.1|497995_498484_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
AXK95024.1|498491_499073_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AXK95025.1|499075_500545_+	ribonuclease G	NA	NA	NA	NA	NA
AXK95026.1|500582_504380_+	AsmA2 domain-containing protein	NA	NA	NA	NA	NA
AXK95027.1|504468_505914_+|protease	metalloprotease TldD	protease	NA	NA	NA	NA
AXK95028.1|505949_506879_-	transcriptional regulator	NA	NA	NA	NA	NA
AXK95029.1|507010_507214_+	protein AaeX	NA	NA	NA	NA	NA
AXK95030.1|507221_508154_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA	NA
AXK95031.1|508159_510127_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
AXK95032.1|510206_510482_+	hypothetical protein	NA	NA	NA	NA	NA
AXK95033.1|510532_510799_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
AXK95034.1|510897_511161_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
AXK95035.1|511536_512007_-	arginine repressor	NA	NA	NA	NA	NA
AXK95036.1|512421_513360_+	malate dehydrogenase	NA	NA	NA	NA	NA
AXK95037.1|513496_514555_-|protease	serine endoprotease DegS	protease	NA	NA	NA	NA
AXK95038.1|514642_516010_-|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	25.3	6.0e-22
AXK95039.1|516183_516582_-	hypothetical protein	NA	NA	NA	NA	NA
AXK95040.1|516772_517900_+	cell division protein ZapE	NA	NA	NA	NA	NA
AXK95041.1|518165_518594_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
AXK95042.1|518609_519002_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
AXK95043.1|519111_519315_-	hypothetical protein	NA	NA	NA	NA	NA
AXK95044.1|519313_519952_+	stringent starvation protein A	NA	NA	NA	NA	NA
AXK95045.1|519955_520450_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	54.8	1.5e-26
>prophage 2
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	1226321	1275465	5518379	coat,integrase,tail,tRNA,transposase,capsid,head,portal,plate	Salmonella_phage(80.0%)	63	1225979:1225995	1252938:1252954
1225979:1225995	attL	CCAGCTGCTGGCGCAGG	NA	NA	NA	NA
AXK95735.1|1226321_1227302_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
AXK95736.1|1227347_1228346_-|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	94.5	2.2e-183
AXK95737.1|1228348_1228978_-	phage repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	54.5	1.4e-61
AXK95738.1|1229100_1229343_+	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	98.8	4.0e-38
AXK95739.1|1229375_1229885_+	hypothetical protein	NA	A0A1S6L008	Salmonella_phage	85.8	1.1e-77
AXK95740.1|1229892_1230093_+	DUF2724 domain-containing protein	NA	A0A1S6L005	Salmonella_phage	68.8	4.5e-19
AXK95741.1|1230056_1230395_+	hypothetical protein	NA	A0A218M4I7	Erwinia_phage	58.0	6.2e-29
AXK95742.1|1230462_1230696_+	DUF2732 domain-containing protein	NA	A0A1S6L021	Salmonella_phage	90.9	6.0e-31
AXK95743.1|1230695_1230923_+	hypothetical protein	NA	A0A1S6L007	Salmonella_phage	92.0	5.1e-35
AXK95744.1|1230919_1231771_+	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	75.4	2.2e-115
AXK95745.1|1231767_1234152_+	endonuclease	NA	A0A1S6L028	Salmonella_phage	87.9	0.0e+00
AXK95746.1|1234381_1234633_+	hypothetical protein	NA	NA	NA	NA	NA
AXK95747.1|1234632_1236117_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXK95748.1|1236224_1236413_+	hypothetical protein	NA	A0A1S6L006	Salmonella_phage	90.3	2.2e-23
AXK95749.1|1236424_1236658_+	DinI family protein	NA	A0A0M4S6H1	Salmonella_phage	96.1	2.0e-34
AXK95750.1|1236753_1237437_-	hypothetical protein	NA	NA	NA	NA	NA
AXK95751.1|1237423_1238503_-	hypothetical protein	NA	NA	NA	NA	NA
AXK95752.1|1238502_1239504_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99707.1|1240025_1240295_+	hypothetical protein	NA	D2IZW1	Enterococcus_phage	41.3	1.4e-15
AXK95753.1|1240351_1241395_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	85.6	3.1e-172
AXK95754.1|1241394_1243158_-	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	91.8	0.0e+00
AXK95755.1|1243298_1244132_+|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	77.6	4.4e-100
AXK95756.1|1244148_1245201_+|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	91.0	6.8e-175
AXK95757.1|1245204_1245858_+	hypothetical protein	NA	A0A1S6KZX1	Salmonella_phage	80.0	1.9e-90
AXK95758.1|1245953_1246418_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	85.7	1.5e-73
AXK95759.1|1246417_1246621_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	89.6	9.8e-30
AXK99708.1|1246624_1246840_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	88.7	6.1e-30
AXK95760.1|1246820_1247330_+	lysozyme	NA	E5G6N1	Salmonella_phage	85.2	1.6e-81
AXK95761.1|1247334_1247718_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	45.4	1.9e-18
AXK95762.1|1247714_1248143_+	hypothetical protein	NA	A0A1S6KZX8	Salmonella_phage	82.5	7.1e-54
AXK95763.1|1248072_1248276_+	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	77.6	3.0e-23
AXK95764.1|1248238_1248661_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	83.2	8.2e-63
AXK95765.1|1248653_1249100_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	72.3	2.5e-54
AXK95766.1|1249122_1249989_-	hypothetical protein	NA	NA	NA	NA	NA
AXK95767.1|1250083_1250656_+|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	70.8	1.4e-76
AXK95768.1|1250652_1251015_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	85.6	8.4e-48
AXK95769.1|1251001_1251910_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	68.9	1.9e-109
AXK95770.1|1251902_1252574_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	58.9	3.2e-61
AXK95771.1|1252575_1254525_+|coat	spore coat protein CotH	coat	Q6QI97	Burkholderia_phage	38.9	1.0e-06
1252938:1252954	attR	CCTGCGCCAGCAGCTGG	NA	NA	NA	NA
AXK95772.1|1254534_1255653_+	hypothetical protein	NA	A0A248XD67	Klebsiella_phage	38.0	4.4e-55
AXK95773.1|1255704_1256778_+|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	53.6	6.6e-40
AXK95774.1|1256926_1258099_+|tail	phage tail protein	tail	A0A1S6KZY7	Salmonella_phage	91.5	3.4e-207
AXK95775.1|1258108_1258624_+|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	84.2	1.4e-80
AXK95776.1|1258676_1258976_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	78.0	8.2e-33
AXK95777.1|1258990_1259110_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
AXK95778.1|1259102_1261733_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	41.9	8.9e-115
AXK95779.1|1261729_1262215_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.1	5.2e-61
AXK95780.1|1262211_1263306_+	late control protein D	NA	E5G6Q3	Salmonella_phage	83.6	2.4e-170
AXK95781.1|1263372_1263591_+	levansucrase regulator	NA	Q53ZE7	Salmonella_virus	72.2	1.9e-26
AXK95782.1|1263618_1263996_-	hypothetical protein	NA	NA	NA	NA	NA
AXK95783.1|1264599_1265082_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	47.4	2.3e-29
AXK95784.1|1265192_1265669_+	ubiquinone-binding protein	NA	NA	NA	NA	NA
AXK95785.1|1265658_1265949_+	RnfH family protein	NA	NA	NA	NA	NA
AXK95786.1|1266015_1266357_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
AXK95787.1|1266504_1268166_-	DNA repair protein RecN	NA	NA	NA	NA	NA
AXK95788.1|1268252_1269131_-	NAD(+) kinase	NA	NA	NA	NA	NA
AXK95789.1|1269255_1269846_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AXK95790.1|1269965_1271252_-	DUF21 domain-containing protein	NA	NA	NA	NA	NA
AXK95791.1|1271271_1272063_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
AXK95792.1|1272226_1273591_+	signal recognition particle protein	NA	NA	NA	NA	NA
AXK95793.1|1273850_1274099_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AXK95794.1|1274117_1274666_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AXK95795.1|1274697_1275465_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
>prophage 3
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	1380181	1432924	5518379	terminase,tail,transposase,holin	Salmonella_phage(40.38%)	63	NA	NA
AXK95884.1|1380181_1381648_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	1.2e-87
AXK95885.1|1381715_1383293_+	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA	NA
AXK95886.1|1383484_1384735_+	DUF4102 domain-containing protein	NA	A0A1X9TCT6	Enterobacter_phage	84.4	5.8e-205
AXK95887.1|1384677_1384920_-	hypothetical protein	NA	NA	NA	NA	NA
AXK95888.1|1384916_1385510_-	adenine methylase	NA	T1SA14	Salmonella_phage	91.9	6.3e-109
AXK95889.1|1385506_1386169_-	hypothetical protein	NA	A0A059VF56	Pseudomonas_phage	46.6	1.2e-47
AXK95890.1|1386165_1386324_-	DUF1317 domain-containing protein	NA	T1SAR0	Salmonella_phage	78.8	1.1e-17
AXK95891.1|1386316_1386610_-	PerC family transcriptional regulator	NA	T1S9J5	Salmonella_phage	71.1	4.0e-32
AXK95892.1|1386719_1386968_-	AlpA family phage regulatory protein	NA	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	76.8	4.9e-31
AXK95893.1|1387016_1387898_-	recombinase RecT	NA	T1SBJ5	Salmonella_phage	84.3	8.9e-136
AXK95894.1|1387894_1388716_-	exodeoxyribonuclease VIII	NA	A0A193GYK2	Enterobacter_phage	80.2	1.8e-130
AXK95895.1|1388712_1389012_-	hypothetical protein	NA	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	54.5	2.1e-20
AXK95896.1|1389378_1389960_-	XRE family transcriptional regulator	NA	Q858D7	Salmonella_phage	64.3	7.1e-65
AXK95897.1|1390114_1390348_+	hypothetical protein	NA	T1SAR5	Salmonella_phage	66.2	9.2e-24
AXK95898.1|1390494_1390704_+	hypothetical protein	NA	A0A193GYW4	Enterobacter_phage	78.3	1.8e-26
AXK95899.1|1390703_1391471_+	primosomal protein	NA	A0A193GZ86	Enterobacter_phage	91.4	8.9e-140
AXK95900.1|1391467_1392253_+	replication protein	NA	A0A193GYX1	Enterobacter_phage	87.7	3.7e-133
AXK95901.1|1392372_1392720_+	DUF1064 domain-containing protein	NA	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	82.6	6.5e-50
AXK95902.1|1392912_1393323_+	hypothetical protein	NA	A0A2P1MXC5	Escherichia_phage	45.1	4.3e-16
AXK95903.1|1393306_1393498_+	hypothetical protein	NA	NA	NA	NA	NA
AXK95904.1|1393494_1394139_+	hypothetical protein	NA	Q1MVG0	Enterobacteria_phage	79.3	8.0e-110
AXK99711.1|1394432_1394900_+	hypothetical protein	NA	A0A2R2Z312	Escherichia_phage	51.7	1.3e-37
AXK95905.1|1394899_1395193_+	hypothetical protein	NA	Q6UAT9	Klebsiella_phage	86.6	2.7e-44
AXK95906.1|1395189_1395810_+	hypothetical protein	NA	Q1MVF7	Enterobacteria_phage	40.7	1.0e-29
AXK99713.1|1395809_1396013_+	hypothetical protein	NA	NA	NA	NA	NA
AXK95907.1|1396005_1396344_+	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	80.0	1.8e-44
AXK95908.1|1396440_1397925_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXK95909.1|1397924_1398176_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99712.1|1398328_1398586_+	lF-82	NA	NA	NA	NA	NA
AXK95910.1|1398663_1399248_+|terminase	terminase small subunit	terminase	T1SBI8	Salmonella_phage	88.6	2.2e-90
AXK95911.1|1399244_1400720_+|terminase	terminase	terminase	Q858H3	Salmonella_phage	93.1	6.4e-280
AXK95912.1|1400763_1401135_-	hypothetical protein	NA	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	91.9	3.7e-59
AXK95913.1|1401184_1401427_+	hypothetical protein	NA	NA	NA	NA	NA
AXK95914.1|1401888_1402095_+	hypothetical protein	NA	T1SA67	Salmonella_phage	88.2	4.8e-08
AXK95915.1|1402109_1403792_+|tail	phage tail protein	tail	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	84.4	1.5e-264
AXK95916.1|1403788_1404085_+	hypothetical protein	NA	T1SBI9	Salmonella_phage	70.4	1.2e-33
AXK95917.1|1404087_1404768_+	peptidase	NA	G9L6C4	Escherichia_phage	84.0	6.1e-76
AXK95918.1|1404782_1405769_+	hypothetical protein	NA	A0A193GZ49	Enterobacter_phage	94.2	2.5e-179
AXK95919.1|1405822_1406260_+	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	91.7	1.3e-66
AXK95920.1|1406270_1406612_+	hypothetical protein	NA	G9L6C7	Escherichia_phage	70.8	2.4e-36
AXK95921.1|1406662_1406986_+	hypothetical protein	NA	G9L6C8	Escherichia_phage	85.0	5.3e-46
AXK95922.1|1406985_1407591_+	hypothetical protein	NA	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	77.0	4.0e-87
AXK95923.1|1407590_1410068_+	hypothetical protein	NA	Q858G3	Salmonella_phage	84.4	0.0e+00
AXK95924.1|1410067_1410532_+	hypothetical protein	NA	Q858G2	Salmonella_phage	81.2	1.5e-70
AXK95925.1|1410531_1411071_+	hypothetical protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	80.0	8.0e-71
AXK95926.1|1411081_1413616_+	hypothetical protein	NA	Q858G0	Salmonella_phage	84.1	0.0e+00
AXK95927.1|1413615_1415526_+	hypothetical protein	NA	Q858F9	Salmonella_phage	82.7	5.4e-287
AXK95928.1|1415525_1418282_+	hypothetical protein	NA	Q858F8	Salmonella_phage	95.4	0.0e+00
AXK95929.1|1418278_1418473_+	hypothetical protein	NA	Q858F7	Salmonella_phage	67.2	6.5e-15
AXK95930.1|1418507_1418660_-	transmembrane anchored protein	NA	G9L6D9	Escherichia_phage	83.7	2.5e-14
AXK95931.1|1418758_1419055_-	hypothetical protein	NA	T1SA06	Salmonella_phage	63.9	6.9e-24
AXK95932.1|1421882_1422146_+	hypothetical protein	NA	NA	NA	NA	NA
AXK95933.1|1422186_1423320_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99714.1|1423308_1423395_+	ABC transporter	NA	NA	NA	NA	NA
AXK95934.1|1423433_1424414_-|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	98.5	1.5e-184
AXK95935.1|1425282_1426545_-|transposase	IS1380 family transposase ISEc9	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
AXK95936.1|1427435_1427576_-	ABC transporter	NA	NA	NA	NA	NA
AXK95937.1|1427653_1428970_+	right-handed parallel beta-helix repeat-containing protein	NA	A0A0K2FI18	Enterobacter_phage	32.3	2.3e-34
AXK95938.1|1429056_1429461_+	hypothetical protein	NA	T1SA79	Salmonella_phage	81.1	8.7e-54
AXK95939.1|1429447_1429753_+|holin	phage holin family protein	holin	A0A193GYK3	Enterobacter_phage	81.4	2.7e-39
AXK95940.1|1429742_1430372_+	endolysin	NA	Q858F0	Salmonella_phage	76.9	1.8e-90
AXK95941.1|1430368_1430869_+	DUF2514 domain-containing protein	NA	Q858E9	Salmonella_phage	76.9	1.3e-59
AXK95942.1|1431055_1432924_-	phosphatase	NA	A0A2P0VMN7	Tetraselmis_virus	22.6	2.6e-07
>prophage 4
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	1763121	1770027	5518379		Planktothrix_phage(33.33%)	6	NA	NA
AXK99729.1|1763121_1763985_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
AXK96228.1|1763995_1764769_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
AXK99730.1|1765010_1765904_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
AXK96229.1|1766149_1767511_-	U32 family peptidase	NA	Q6DW11	Phage_TP	94.8	1.8e-207
AXK96230.1|1767829_1768552_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
AXK96231.1|1768548_1770027_-	two-component system sensor histidine kinase BaeA	NA	W8CYF6	Bacillus_phage	28.3	8.5e-30
>prophage 5
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	1810762	1826508	5518379		Enterobacteria_phage(33.33%)	15	NA	NA
AXK96258.1|1810762_1812169_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	3.6e-38
AXK96259.1|1812392_1813457_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.7	4.4e-105
AXK96260.1|1813470_1814340_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	67.4	3.4e-111
AXK96261.1|1814371_1815262_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	3.7e-28
AXK96262.1|1815276_1815831_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	57.6	1.9e-51
AXK96263.1|1816010_1817177_+	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	7.0e-112
AXK96264.1|1818125_1819130_-	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	29.2	4.0e-31
AXK96265.1|1819085_1819367_+	hypothetical protein	NA	NA	NA	NA	NA
AXK96266.1|1819969_1821034_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	55.0	2.6e-105
AXK96267.1|1821047_1821917_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	67.0	5.7e-111
AXK96268.1|1821948_1822839_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	3.7e-28
AXK96269.1|1822853_1823408_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	57.6	1.9e-51
AXK96270.1|1823494_1824325_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AXK96271.1|1824353_1825187_+	ABC transporter permease	NA	NA	NA	NA	NA
AXK96272.1|1825176_1826508_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.1	6.9e-15
>prophage 6
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	2792159	2803046	5518379		Escherichia_phage(87.5%)	9	NA	NA
AXK97171.1|2792159_2795267_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
AXK97172.1|2795321_2796587_+	MFS transporter	NA	NA	NA	NA	NA
AXK97173.1|2796617_2797706_-	chromosome segregation protein SMC	NA	A0A077SLJ9	Escherichia_phage	100.0	8.0e-211
AXK97174.1|2797792_2798053_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	97.7	3.5e-40
AXK97175.1|2798350_2799211_+	class A broad-spectrum beta-lactamase SHV-11	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
AXK97176.1|2799231_2799993_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
AXK97177.1|2800253_2801156_+	oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.3	7.7e-159
AXK97178.1|2801167_2802433_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.5	6.6e-233
AXK97179.1|2802425_2803046_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 7
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	2996311	3132987	5518379	integrase,terminase,tail,transposase,lysis,protease,holin,head,plate	uncultured_Caudovirales_phage(21.18%)	156	3020684:3020701	3141427:3141444
AXK97362.1|2996311_2997397_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AXK97363.1|2997360_2999115_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AXK97364.1|3000786_3004212_-	type VI secretion protein VasK	NA	NA	NA	NA	NA
AXK97365.1|3004195_3005335_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97366.1|3005331_3005589_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
AXK97367.1|3005633_3008051_-	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
AXK97368.1|3008038_3008569_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXK97369.1|3008636_3009167_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXK97370.1|3009235_3009766_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AXK97371.1|3009829_3010609_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AXK97372.1|3010609_3012988_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	33.8	9.2e-18
AXK97373.1|3012980_3015635_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	33.4	2.5e-96
AXK97374.1|3015899_3016391_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AXK97375.1|3016395_3018102_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97376.1|3018098_3018788_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
AXK99779.1|3018784_3020125_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AXK97377.1|3020137_3021682_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
3020684:3020701	attL	ATCTTTCACCGCGCCGCC	NA	NA	NA	NA
AXK97378.1|3021724_3022216_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AXK97379.1|3022685_3023666_+|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
AXK97380.1|3023704_3023848_-	ABC transporter	NA	NA	NA	NA	NA
AXK97381.1|3024261_3024510_+	damage-inducible protein DinI	NA	S5MQI1	Escherichia_phage	70.4	1.4e-25
AXK97382.1|3024732_3025017_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97383.1|3025121_3025331_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97384.1|3025327_3026059_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99780.1|3026069_3026798_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97385.1|3029148_3029346_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97386.1|3029345_3030212_-	hypothetical protein	NA	A0A2H4IYR0	uncultured_Caudovirales_phage	64.5	1.9e-34
AXK97387.1|3030211_3030985_-	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	54.4	2.8e-77
AXK97388.1|3030981_3032178_-	hypothetical protein	NA	A0A0M4RD32	Salmonella_phage	72.9	3.9e-158
AXK97389.1|3032177_3032531_-	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	80.3	2.3e-50
AXK97390.1|3032532_3033186_-	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	63.5	1.0e-59
AXK97391.1|3033239_3033806_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97392.1|3033842_3034028_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97393.1|3034080_3034422_-	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	46.6	1.8e-23
AXK97394.1|3034421_3035444_-	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	54.2	9.2e-100
AXK97395.1|3035446_3035749_-	hypothetical protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	55.2	2.0e-26
AXK97396.1|3035749_3036349_-	hypothetical protein	NA	A0A2H4J1B3	uncultured_Caudovirales_phage	57.6	9.9e-54
AXK97397.1|3036348_3038352_-	lytic transglycosylase	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	63.6	1.2e-247
AXK97398.1|3038341_3038494_-	NTP pyrophosphohydrolase	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	88.0	7.6e-19
AXK97399.1|3038529_3038955_-	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	63.4	2.6e-40
AXK97400.1|3038958_3039399_-	DUF3277 domain-containing protein	NA	A0A0M5M1K6	Salmonella_phage	80.1	3.3e-62
AXK97401.1|3039409_3040555_-	hypothetical protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	76.9	6.3e-166
AXK97402.1|3040558_3040999_-	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	51.7	1.6e-40
AXK97403.1|3041093_3041480_-|head,tail	head-tail adaptor	head,tail	A0A2H4J1A4	uncultured_Caudovirales_phage	78.2	1.1e-48
AXK97404.1|3041479_3041986_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97405.1|3041982_3042402_-	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	60.7	3.3e-40
AXK97406.1|3042370_3042652_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97407.1|3042691_3043633_-	DUF2184 domain-containing protein	NA	A0A2H4J191	uncultured_Caudovirales_phage	77.1	1.7e-137
AXK97408.1|3043644_3044139_-	hypothetical protein	NA	A0A2H4JHM9	uncultured_Caudovirales_phage	62.7	4.2e-50
AXK97409.1|3044142_3045345_-	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	54.1	2.6e-106
AXK97410.1|3045396_3045945_-	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	56.3	3.0e-49
AXK97411.1|3046000_3047452_-	hypothetical protein	NA	A0A0M4S6U1	Salmonella_phage	68.8	3.8e-192
AXK97412.1|3047689_3049090_-|terminase	PBSX family phage terminase large subunit	terminase	A0A077KAW0	Edwardsiella_phage	69.0	9.4e-188
AXK97413.1|3049040_3049793_-	hypothetical protein	NA	A0A077KBY7	Edwardsiella_phage	66.0	4.0e-12
AXK97414.1|3049894_3050215_-	negative regulator GrlR	NA	NA	NA	NA	NA
AXK97415.1|3050449_3050839_-	lipase chaperone	NA	A0A192Y6H8	Salmonella_phage	49.2	9.4e-21
AXK97416.1|3050835_3051366_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	77.1	2.7e-79
AXK97417.1|3051368_3051617_-|lysis	lysis protein	lysis	NA	NA	NA	NA
AXK97418.1|3052022_3052805_-	antitermination protein	NA	F1C595	Cronobacter_phage	76.8	7.2e-113
AXK97419.1|3052801_3053278_-	hypothetical protein	NA	A0A286N2Q1	Klebsiella_phage	100.0	1.8e-90
AXK97420.1|3053274_3054237_-	DNA primase	NA	A0A286N2Q0	Klebsiella_phage	99.4	4.8e-183
AXK97421.1|3054238_3055897_-	helicase	NA	A0A286N2P9	Klebsiella_phage	96.0	0.0e+00
AXK97422.1|3056205_3056499_-	hypothetical protein	NA	A0A286S2B5	Klebsiella_phage	97.6	2.8e-38
AXK97423.1|3056473_3056695_-	XRE family transcriptional regulator	NA	A0A286S2C1	Klebsiella_phage	100.0	3.0e-32
AXK97424.1|3056792_3057461_+	LexA family transcriptional repressor	NA	A0A286S2B2	Klebsiella_phage	99.5	2.4e-125
AXK97425.1|3057631_3057946_+	hypothetical protein	NA	A0A286S1T9	Klebsiella_phage	100.0	1.0e-49
AXK97426.1|3057938_3058127_+	hypothetical protein	NA	A0A286S1P8	Klebsiella_phage	100.0	4.6e-26
AXK99781.1|3058421_3058535_+	ABC transporter	NA	NA	NA	NA	NA
AXK97427.1|3058573_3059554_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
AXK97428.1|3059607_3059862_+	hypothetical protein	NA	A0A286S1Q6	Klebsiella_phage	98.7	2.0e-35
AXK97429.1|3059854_3060109_+	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	97.6	3.1e-41
AXK97430.1|3060295_3060721_+	hypothetical protein	NA	A0A286S1S2	Klebsiella_phage	77.9	3.5e-53
AXK97431.1|3060717_3060912_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97432.1|3060908_3061736_+|protease	serine protease	protease	Q8W654	Enterobacteria_phage	84.0	5.5e-111
AXK97433.1|3061840_3062359_+	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	98.8	1.7e-94
AXK97434.1|3062364_3063075_+	DNA-binding protein	NA	A0A286S260	Klebsiella_phage	88.3	2.1e-111
AXK97435.1|3063064_3063289_+	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	89.2	3.1e-29
AXK97436.1|3063285_3063498_+	hypothetical protein	NA	A0A286S2B6	Klebsiella_phage	98.6	3.4e-33
AXK97437.1|3063494_3063974_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97438.1|3064152_3064395_+	AlpA family transcriptional regulator	NA	A0A0M4RTZ2	Salmonella_phage	73.8	2.2e-20
AXK97439.1|3064375_3065557_-|integrase	integrase	integrase	A0A0M4QX09	Salmonella_phage	84.2	5.6e-202
AXK97440.1|3065753_3066302_+|protease	protease	protease	NA	NA	NA	NA
AXK97441.1|3066500_3068033_-	phosphohydrolase	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	30.0	1.1e-21
AXK97442.1|3068249_3069011_-	3-oxoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.5	2.4e-20
AXK97443.1|3069119_3070034_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK97444.1|3070334_3070523_+	cold-shock protein	NA	NA	NA	NA	NA
AXK97445.1|3070593_3070902_-	anti-sigma regulatory factor	NA	NA	NA	NA	NA
AXK97446.1|3070907_3071045_+	glycosyl hydrolase family 2	NA	NA	NA	NA	NA
AXK97447.1|3071069_3071939_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	42.1	5.7e-50
AXK97448.1|3072017_3073220_-	MFS transporter	NA	NA	NA	NA	NA
AXK97449.1|3073292_3074429_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97450.1|3074601_3075486_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK97451.1|3075610_3076444_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97452.1|3076674_3077061_+	glyoxalase	NA	NA	NA	NA	NA
AXK97453.1|3077228_3078845_-	oligopeptide ABC transporter substrate-binding protein OppA	NA	NA	NA	NA	NA
AXK97454.1|3079030_3079738_+	murein peptide amidase A	NA	NA	NA	NA	NA
AXK97455.1|3079734_3080700_-	L-Ala-D/L-Glu epimerase	NA	NA	NA	NA	NA
AXK97456.1|3080802_3081309_+	thiol peroxidase	NA	NA	NA	NA	NA
AXK99782.1|3081379_3082402_-	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
AXK97457.1|3082533_3084075_-	transcriptional regulator TyrR	NA	NA	NA	NA	NA
AXK97458.1|3084247_3085561_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
AXK97459.1|3085692_3086574_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK97460.1|3086663_3087725_-	TIGR01620 family protein	NA	NA	NA	NA	NA
AXK97461.1|3087721_3089119_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97462.1|3089221_3089440_-	phage shock protein D	NA	NA	NA	NA	NA
AXK97463.1|3089468_3089828_-	envelope stress response membrane protein PspC	NA	NA	NA	NA	NA
AXK97464.1|3089827_3090052_-	envelope stress response membrane protein PspB	NA	NA	NA	NA	NA
AXK97465.1|3090107_3090776_-	phage shock protein PspA	NA	NA	NA	NA	NA
AXK99783.1|3090943_3091918_+	phage shock protein operon transcriptional activator	NA	NA	NA	NA	NA
AXK97466.1|3091908_3093300_-	MFS transporter	NA	NA	NA	NA	NA
AXK97467.1|3093325_3094495_-	amidohydrolase	NA	NA	NA	NA	NA
AXK97468.1|3096953_3097784_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AXK97469.1|3097894_3098800_+	NAD-dependent dehydratase	NA	NA	NA	NA	NA
AXK97470.1|3099133_3100777_+	peptide ABC transporter substrate-binding protein SapA	NA	NA	NA	NA	NA
AXK97471.1|3100773_3101739_+	peptide ABC transporter permease SapB	NA	NA	NA	NA	NA
AXK97472.1|3101943_3102615_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.6	4.5e-79
AXK99784.1|3102801_3103629_+	FRG domain-containing protein	NA	A0A1S6KZX9	Salmonella_phage	30.2	8.4e-19
AXK97473.1|3103704_3104970_-	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	82.7	9.6e-208
AXK97474.1|3104971_3105391_-	translesion error-prone DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	57.5	1.4e-35
AXK97475.1|3105470_3106955_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXK97476.1|3106954_3107206_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97477.1|3107852_3108275_-	hypothetical protein	NA	K7P834	Enterobacteria_phage	45.3	3.6e-26
AXK97478.1|3108867_3109572_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXK97479.1|3110187_3110535_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
AXK99785.1|3110698_3111490_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
AXK97480.1|3112471_3113176_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXK97481.1|3113212_3113500_-	hypothetical protein	NA	A0A286N2Q7	Klebsiella_phage	95.4	4.4e-36
AXK97482.1|3113496_3114036_-	hypothetical protein	NA	A0A286N2Q6	Klebsiella_phage	98.9	3.3e-101
AXK97483.1|3114032_3114344_-|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	100.0	3.8e-49
AXK99786.1|3114981_3115671_-	antiterminator	NA	I6PDF8	Cronobacter_phage	53.1	2.1e-55
AXK97484.1|3115807_3116446_-	hypothetical protein	NA	H6WRY9	Salmonella_phage	69.8	3.2e-74
AXK97485.1|3116438_3117107_-	serine/threonine protein phosphatase	NA	K7P6H8	Enterobacteria_phage	78.7	1.4e-104
AXK97486.1|3117103_3117271_-	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	62.5	4.6e-09
AXK97487.1|3117251_3117719_-	recombination protein NinB	NA	Q8VNP6	Enterobacteria_phage	45.8	3.4e-33
AXK97488.1|3118239_3119268_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97489.1|3119475_3119721_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97490.1|3119776_3120079_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AXK97491.1|3120075_3120924_-	ATP-binding protein	NA	K7PLU3	Enterobacteria_phage	60.1	5.1e-88
AXK97492.1|3120920_3121781_-	replication protein	NA	K7PGT1	Enterobacteria_phage	53.3	1.0e-59
AXK97493.1|3121866_3122088_-	transcriptional regulator	NA	G8EYH8	Enterobacteria_phage	41.7	6.9e-05
AXK97494.1|3122128_3122356_-	transcriptional regulator	NA	Q76H55	Enterobacteria_phage	77.1	1.4e-24
AXK99787.1|3122467_3123166_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	84.1	3.7e-108
AXK99788.1|3123188_3123308_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97495.1|3123453_3124530_+	ParA family protein	NA	H2BD62	Pseudomonas_phage	37.9	9.1e-58
AXK97496.1|3124611_3124815_-	hypothetical protein	NA	A0A192Y6Q5	Salmonella_phage	71.6	3.9e-18
AXK97497.1|3125243_3125438_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97498.1|3125526_3125811_+	hypothetical protein	NA	G8C7T1	Escherichia_phage	79.8	1.1e-39
AXK97499.1|3125826_3126672_+	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	59.2	1.8e-69
AXK97500.1|3126957_3127638_+	exonuclease	NA	A0A0M3ULE0	Salmonella_phage	91.2	8.2e-121
AXK97501.1|3127634_3128063_+	regulator	NA	M9NYX4	Enterobacteria_phage	80.3	7.5e-64
AXK97502.1|3128059_3128722_+	DNA methyltransferase	NA	G8C7S6	Escherichia_phage	84.6	2.7e-105
AXK97503.1|3128718_3129033_+	hypothetical protein	NA	K7PM28	Enterobacteria_phage	50.8	1.6e-10
AXK99789.1|3128929_3130117_-|integrase	integrase	integrase	K7PGY1	Enterobacteria_phage	52.4	1.1e-120
AXK97504.1|3130293_3131184_+	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
AXK97505.1|3131183_3132176_+	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	27.2	3.0e-07
AXK97506.1|3132177_3132987_+	peptide ABC transporter ATP-binding protein SapF	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	2.1e-14
3141427:3141444	attR	ATCTTTCACCGCGCCGCC	NA	NA	NA	NA
>prophage 8
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	3260659	3348538	5518379	integrase,terminase,tail,tRNA,capsid,holin,head,portal	Klebsiella_phage(45.45%)	96	3287462:3287476	3346349:3346363
AXK97626.1|3260659_3261160_+|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
AXK97627.1|3261276_3261723_+	DUF441 domain-containing protein	NA	NA	NA	NA	NA
AXK99794.1|3261706_3262498_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXK97628.1|3262599_3263784_+	cyanate MFS transporter	NA	NA	NA	NA	NA
AXK97629.1|3263815_3264508_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97630.1|3264653_3265163_+	DUF523 domain-containing protein	NA	NA	NA	NA	NA
AXK97631.1|3265149_3265506_+	DUF488 domain-containing protein	NA	NA	NA	NA	NA
AXK97632.1|3265495_3265735_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
AXK97633.1|3266035_3267049_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.0	1.4e-12
AXK97634.1|3267106_3267208_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99795.1|3267207_3267282_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97635.1|3267399_3267525_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97636.1|3267584_3267848_-	DUF2534 domain-containing protein	NA	NA	NA	NA	NA
AXK97637.1|3267978_3268617_-	leucine efflux protein	NA	NA	NA	NA	NA
AXK97638.1|3268706_3269621_-	lipid A biosynthesis palmitoleoyl acyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.1e-72
AXK97639.1|3269836_3270028_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97640.1|3270282_3271326_-	L-asparaginase	NA	NA	NA	NA	NA
AXK97641.1|3271628_3272837_+	phosphodiesterase	NA	NA	NA	NA	NA
AXK97642.1|3272910_3274695_+	hypothetical protein	NA	A0A127AWB9	Bacillus_phage	36.1	5.8e-17
AXK97643.1|3274701_3275592_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK97644.1|3275712_3277221_+	3,4-dihydroxybenzoate decarboxylase	NA	NA	NA	NA	NA
AXK97645.1|3277531_3278218_-	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AXK97646.1|3278615_3278795_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97647.1|3278834_3279467_-	DNA-binding protein	NA	NA	NA	NA	NA
AXK97648.1|3280033_3280231_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97649.1|3280346_3281357_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AXK97650.1|3281353_3282760_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AXK97651.1|3282815_3283703_-	Mn-containing catalase	NA	NA	NA	NA	NA
AXK97652.1|3283719_3284226_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
AXK97653.1|3284252_3284747_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
AXK97654.1|3284837_3285023_-	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA	NA
AXK97655.1|3285644_3286838_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA	NA
AXK97656.1|3286950_3287178_+	DUF1272 domain-containing protein	NA	NA	NA	NA	NA
3287462:3287476	attL	TGGCTGGCGTTCTTT	NA	NA	NA	NA
AXK97657.1|3287614_3287938_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AXK97658.1|3287930_3288323_+	amino acid-binding protein	NA	NA	NA	NA	NA
AXK97659.1|3288319_3289033_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AXK97660.1|3289305_3289458_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.0	3.8e-18
AXK97661.1|3289612_3291109_-|tail	phage tail protein	tail	A0A0P0IDN1	Klebsiella_phage	63.7	1.4e-125
AXK97662.1|3291177_3303882_-	DUF1983 domain-containing protein	NA	Q6UAW1	Klebsiella_phage	47.1	0.0e+00
AXK97663.1|3303944_3304538_-|tail	tail assembly protein	tail	K7PHE5	Enterobacteria_phage	76.6	8.0e-80
AXK97664.1|3304564_3304987_-	hypothetical protein	NA	J9Q806	Salmonella_phage	50.0	5.9e-29
AXK97665.1|3305028_3305739_-	peptidase P60	NA	Q6UAW4	Klebsiella_phage	90.3	1.9e-136
AXK97666.1|3305740_3306496_-|tail	phage minor tail protein L	tail	Q6UAW5	Klebsiella_phage	80.5	4.6e-125
AXK97667.1|3306492_3306831_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	88.4	1.4e-57
AXK97668.1|3306830_3310166_-|tail	phage tail tape measure protein	tail	Q6UAW7	Klebsiella_phage	88.3	0.0e+00
AXK97669.1|3310165_3310384_-	hypothetical protein	NA	Q6UAW9	Klebsiella_phage	90.5	5.4e-34
AXK97670.1|3310398_3310764_-|tail	phage tail protein	tail	Q6UAW8	Klebsiella_phage	89.3	1.6e-51
AXK97671.1|3310821_3311283_-|tail	phage tail protein	tail	Q6UAX0	Klebsiella_phage	83.7	7.8e-67
AXK97672.1|3311314_3311716_-	hypothetical protein	NA	Q6UAX1	Klebsiella_phage	94.0	2.3e-62
AXK97673.1|3311712_3312102_-	hypothetical protein	NA	Q6UAX2	Klebsiella_phage	86.0	9.6e-58
AXK97674.1|3312082_3312421_-|head,tail	head-tail adaptor protein	head,tail	Q6UAX3	Klebsiella_phage	90.2	2.8e-53
AXK97675.1|3312417_3312735_-|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6UAX4	Klebsiella_phage	89.8	1.5e-45
AXK97676.1|3312715_3312976_-	hypothetical protein	NA	Q6UAX5	Klebsiella_phage	60.5	7.4e-22
AXK97677.1|3313034_3314321_-|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	89.0	9.8e-216
AXK97678.1|3314398_3315319_-	serine peptidase	NA	Q6UAX7	Klebsiella_phage	88.2	9.6e-149
AXK97679.1|3315355_3316615_-|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	89.8	1.8e-222
AXK97680.1|3316614_3316794_-	hypothetical protein	NA	Q6UAX9	Klebsiella_phage	57.6	3.1e-11
AXK97681.1|3316787_3318509_-|terminase	terminase large subunit	terminase	Q7Y413	Yersinia_phage	57.4	1.5e-190
AXK97682.1|3318508_3318943_-|terminase	phage terminase small subunit P27 family	terminase	A0A1J0GV10	Halomonas_phage	61.9	9.4e-30
AXK97683.1|3319191_3319623_-	hypothetical protein	NA	Q6UAS0	Klebsiella_phage	61.6	1.8e-41
AXK97684.1|3319619_3319943_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97685.1|3319894_3320257_-	HNH endonuclease	NA	Q6UAS2	Klebsiella_phage	83.3	1.2e-57
AXK97686.1|3320583_3320808_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97687.1|3320846_3321284_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97688.1|3322233_3322584_-	hypothetical protein	NA	R9TPM9	Aeromonas_phage	38.1	7.9e-11
AXK97689.1|3322580_3323078_-	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	84.6	1.1e-77
AXK97690.1|3323077_3323293_-|holin	holin	holin	A5LH82	Enterobacteria_phage	88.7	2.7e-30
AXK97691.1|3325544_3326147_-	hypothetical protein	NA	H9C175	Pectobacterium_phage	68.6	1.1e-76
AXK97692.1|3326163_3327195_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	49.6	4.7e-96
AXK97693.1|3327194_3327398_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97694.1|3327394_3327787_-	DNA-binding protein	NA	K7PHB4	Enterobacterial_phage	36.6	8.0e-12
AXK97695.1|3327827_3328118_-	hypothetical protein	NA	H6WRY6	Salmonella_phage	56.9	8.0e-17
AXK97696.1|3328129_3328363_-	DinI family protein	NA	K7PM44	Enterobacteria_phage	71.1	3.7e-25
AXK97697.1|3328441_3329926_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXK97698.1|3329925_3330177_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97699.1|3330766_3332128_-	dGTPase	NA	NA	NA	NA	NA
AXK97700.1|3332301_3333015_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99796.1|3333366_3334236_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97701.1|3334324_3335716_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97702.1|3336064_3336505_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97703.1|3336518_3336983_-	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	72.2	4.1e-63
AXK99797.1|3336975_3337980_-	DNA-binding protein	NA	A0A0U2RT81	Escherichia_phage	40.0	1.0e-31
AXK97704.1|3338039_3338594_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97705.1|3338596_3338821_-	Cro/Cl family transcriptional regulator	NA	H6WRX5	Salmonella_phage	62.5	1.3e-19
AXK97706.1|3338909_3339347_+	helix-turn-helix domain-containing protein	NA	H6WRX4	Salmonella_phage	62.2	1.3e-39
AXK97707.1|3339668_3339983_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97708.1|3340145_3340364_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97709.1|3340373_3340568_+	DUF1482 domain-containing protein	NA	NA	NA	NA	NA
AXK97710.1|3340610_3340955_+	transcriptional regulator	NA	NA	NA	NA	NA
AXK97711.1|3341096_3343235_+	exonuclease	NA	S4TNL0	Salmonella_phage	42.7	5.6e-99
AXK97712.1|3343287_3343533_+	excisionase	NA	NA	NA	NA	NA
AXK97713.1|3343513_3344641_+|integrase	integrase	integrase	O21925	Phage_21	58.4	4.4e-119
AXK97714.1|3344758_3346009_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
AXK97715.1|3346249_3346900_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
3346349:3346363	attR	AAAGAACGCCAGCCA	NA	NA	NA	NA
AXK97716.1|3346916_3347375_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AXK99798.1|3347431_3348538_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 9
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	3564881	3657832	5518379	integrase,tail,tRNA,protease,capsid,head,portal,plate	Salmonella_phage(56.9%)	96	3620407:3620425	3657907:3657925
AXK97910.1|3564881_3566174_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.7	7.3e-94
AXK97911.1|3566264_3567608_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.8	7.3e-81
AXK97912.1|3567616_3568228_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
AXK97913.1|3568350_3572604_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.2	5.2e-88
AXK97914.1|3572739_3573234_-	leucine-responsive regulatory protein	NA	NA	NA	NA	NA
AXK97915.1|3573766_3574735_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.0	3.2e-62
AXK97916.1|3574849_3576616_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	25.9	2.3e-21
AXK97917.1|3576616_3578338_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
AXK97918.1|3578382_3579084_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
AXK97919.1|3579437_3579656_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
AXK97920.1|3579776_3582056_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
AXK97921.1|3582086_3582404_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
AXK97922.1|3582729_3582951_+	cold shock domain protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
AXK97923.1|3582905_3583088_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97924.1|3583027_3584968_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
AXK97925.1|3584964_3586080_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
AXK97926.1|3586226_3587885_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
AXK97927.1|3588304_3589000_+	aquaporin Z	NA	NA	NA	NA	NA
AXK97928.1|3589115_3590015_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99807.1|3590158_3591811_+	hydroxylamine reductase	NA	NA	NA	NA	NA
AXK97929.1|3591821_3592790_+	NADH oxidoreductase	NA	NA	NA	NA	NA
AXK97930.1|3593001_3593436_-	DoxX family protein	NA	NA	NA	NA	NA
AXK99808.1|3593587_3595306_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA	NA
AXK97931.1|3595344_3596346_+	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
AXK97932.1|3596356_3597799_+	DUF2867 domain-containing protein	NA	NA	NA	NA	NA
AXK97933.1|3597886_3598900_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AXK97934.1|3598896_3599727_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B0UZW5	Roseobacter_phage	31.6	4.1e-05
AXK97935.1|3599758_3600898_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AXK97936.1|3600950_3601130_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97937.1|3601775_3602291_+	lipoprotein	NA	NA	NA	NA	NA
AXK97938.1|3602517_3603246_+	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	37.1	1.2e-29
AXK99809.1|3603266_3603998_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK97939.1|3604004_3604721_+	arginine transporter permease subunit ArtQ	NA	NA	NA	NA	NA
AXK97940.1|3604720_3605389_+	arginine transporter permease subunit ArtM	NA	NA	NA	NA	NA
AXK97941.1|3605572_3606304_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXK97942.1|3606346_3607819_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	31.8	7.9e-28
AXK97943.1|3607815_3608532_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.9	2.1e-34
AXK97944.1|3608610_3609738_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A2K5B251	Erysipelothrix_phage	25.6	1.3e-19
AXK97945.1|3609779_3610268_-	DUF2593 domain-containing protein	NA	NA	NA	NA	NA
AXK97946.1|3610325_3611171_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
AXK97947.1|3611167_3612121_-	putrescine ABC transporter permease	NA	NA	NA	NA	NA
AXK99810.1|3612131_3613265_-	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.9	2.2e-30
AXK97948.1|3613428_3614541_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
AXK97949.1|3614889_3615369_-	YbjN domain-containing protein	NA	NA	NA	NA	NA
AXK97950.1|3615457_3616360_-	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	35.3	2.0e-34
AXK97951.1|3617181_3617469_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97952.1|3617671_3617935_+	GrxA family glutaredoxin	NA	A0A2I7SAE2	Vibrio_phage	73.1	1.6e-27
AXK97953.1|3617941_3618325_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99811.1|3618591_3620277_+	transporter	NA	NA	NA	NA	NA
3620407:3620425	attL	ATGGGTTTTTTGTTGCCTG	NA	NA	NA	NA
AXK97954.1|3620496_3620715_-	transcriptional regulator	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
AXK97955.1|3620806_3621907_-	late control protein D	NA	A0A1S6KZZ5	Salmonella_phage	87.4	4.9e-176
AXK97956.1|3621903_3622389_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	75.6	7.2e-63
AXK97957.1|3622385_3625013_-|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	42.0	5.6e-117
AXK97958.1|3625005_3625125_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
AXK97959.1|3625139_3625439_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	79.0	3.7e-33
AXK97960.1|3625491_3626007_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	85.4	1.3e-81
AXK97961.1|3626016_3627189_-|tail	phage tail protein	tail	A0A1S6KZY7	Salmonella_phage	93.3	1.9e-210
AXK97962.1|3627327_3628404_-|tail	phage tail protein	tail	Q37842	Escherichia_phage	44.8	1.2e-25
AXK97963.1|3628433_3628637_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97964.1|3628633_3629365_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97965.1|3629368_3632320_-	hypothetical protein	NA	A0A2H4N7A3	Pectobacterium_phage	50.9	1.2e-06
AXK97966.1|3632321_3632921_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	60.5	1.3e-58
AXK97967.1|3632913_3633822_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	66.9	7.6e-106
AXK97968.1|3633808_3634171_-|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	83.9	4.9e-48
AXK97969.1|3634167_3634740_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	72.3	4.7e-77
AXK97970.1|3634834_3635527_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97971.1|3635523_3635970_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	71.2	2.2e-50
AXK97972.1|3635962_3636394_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	82.5	9.9e-64
AXK97973.1|3636489_3636918_-	hypothetical protein	NA	A0A1S6KZX8	Salmonella_phage	77.9	9.6e-51
AXK97974.1|3636914_3637298_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	42.0	2.1e-17
AXK97975.1|3637302_3637812_-	lysozyme	NA	E5G6N1	Salmonella_phage	83.4	2.1e-81
AXK97976.1|3637792_3638008_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	90.1	3.6e-30
AXK97977.1|3638011_3638215_-|tail	phage tail protein	tail	A0A1S6KZY4	Salmonella_phage	88.1	1.3e-29
AXK97978.1|3638214_3638679_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	8.4e-77
AXK97979.1|3638774_3639425_-	hypothetical protein	NA	E5G6M7	Salmonella_phage	96.3	8.7e-112
AXK97980.1|3639428_3640487_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.1	1.1e-180
AXK97981.1|3640503_3641337_-|capsid	capsid protein	capsid	A0A1S6KZW9	Salmonella_phage	88.8	6.3e-123
AXK97982.1|3641479_3643246_+	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	99.0	0.0e+00
AXK97983.1|3643245_3644271_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	86.7	7.6e-171
AXK97984.1|3644332_3646075_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97985.1|3646350_3647028_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97986.1|3647142_3647448_-	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
AXK99812.1|3647386_3647575_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	98.4	5.5e-27
AXK97987.1|3647728_3650143_-	replication endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
AXK97988.1|3650139_3650997_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	95.4	2.0e-156
AXK97989.1|3650993_3651221_-	hypothetical protein	NA	E5G6L7	Salmonella_phage	98.7	6.0e-36
AXK97990.1|3651220_3651454_-	DUF2732 domain-containing protein	NA	E5G6L6	Salmonella_phage	96.1	4.1e-32
AXK97991.1|3651521_3651863_-	hypothetical protein	NA	E5G6L5	Salmonella_phage	99.1	4.6e-56
AXK97992.1|3651826_3652027_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	97.0	1.6e-32
AXK97993.1|3652034_3652544_-	hypothetical protein	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
AXK97994.1|3652576_3652798_-	regulator	NA	NA	NA	NA	NA
AXK99813.1|3652943_3653822_+	Repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	39.9	1.7e-30
AXK97995.1|3653833_3654778_+	hypothetical protein	NA	NA	NA	NA	NA
AXK97996.1|3654876_3656361_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXK97997.1|3656360_3656612_-	hypothetical protein	NA	NA	NA	NA	NA
AXK97998.1|3656779_3657832_+|integrase	integrase	integrase	A0A218M4I3	Erwinia_phage	57.0	1.0e-106
3657907:3657925	attR	ATGGGTTTTTTGTTGCCTG	NA	NA	NA	NA
>prophage 10
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	4310705	4322358	5518379	integrase	Enterobacteria_phage(70.0%)	13	4311155:4311169	4334210:4334224
AXK98585.1|4310705_4311809_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.5	4.8e-62
4311155:4311169	attL	CAATCTCTCCGCGCT	NA	NA	NA	NA
AXK98586.1|4311819_4313073_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	44.9	8.9e-89
AXK98587.1|4313425_4314616_+|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	62.7	6.4e-145
AXK98588.1|4314603_4315554_+	cobyrinic acid a,c-diamide synthase	NA	A0A1X9IGI7	Lactococcus_phage	27.1	1.2e-13
AXK98589.1|4315553_4315979_+	hypothetical protein	NA	NA	NA	NA	NA
AXK98590.1|4316546_4317113_-	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
AXK98591.1|4317130_4317376_-	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
AXK98592.1|4317372_4318110_-	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	59.4	1.9e-70
AXK98593.1|4318651_4318918_+	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	71.6	2.6e-30
AXK98594.1|4318914_4319472_+	Ash-like/host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	70.4	1.8e-33
AXK98595.1|4319468_4319696_+	hypothetical protein	NA	NA	NA	NA	NA
AXK98596.1|4319692_4320013_+	hypothetical protein	NA	NA	NA	NA	NA
AXK98597.1|4320024_4322358_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	82.2	0.0e+00
4334210:4334224	attR	CAATCTCTCCGCGCT	NA	NA	NA	NA
>prophage 11
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	4790604	4800129	5518379	transposase	Enterobacteria_phage(83.33%)	10	NA	NA
AXK99006.1|4790604_4792938_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	83.9	0.0e+00
AXK99007.1|4792952_4793273_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99008.1|4793269_4793497_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99009.1|4793493_4794042_-	Ash-like/host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	69.4	1.1e-30
AXK99010.1|4794865_4795603_+	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	59.4	1.1e-70
AXK99011.1|4795599_4795845_+	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
AXK99012.1|4795862_4796429_+	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
AXK99013.1|4797169_4798249_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99014.1|4798249_4798786_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99015.1|4799148_4800129_+|transposase	IS5 family transposase ISKpn26	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
>prophage 12
CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	4986777	5024833	5518379	integrase,transposase	Salmonella_phage(16.67%)	38	4976969:4976984	5006188:5006203
4976969:4976984	attL	CCTGGCCGGTGGCGTG	NA	NA	NA	NA
AXK99199.1|4986777_4989663_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	39.9	1.1e-190
AXK99200.1|4990365_4991130_-|transposase	IS6 family transposase IS6100	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
AXK99201.1|4991217_4991331_+	NTP-binding protein	NA	NA	NA	NA	NA
AXK99202.1|4991636_4992137_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXK99203.1|4992155_4992335_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99204.1|4992264_4993104_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA	NA
AXK99205.1|4993097_4993445_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
AXK99206.1|4993608_4994400_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
AXK99875.1|4994492_4995752_-	chloramphenicol efflux MFS transporter CmlA10	NA	S4TR35	Salmonella_phage	31.3	1.1e-25
AXK99207.1|4996006_4996540_-	aminoglycoside nucleotidyltransferase ANT(2'')-Ia	NA	NA	NA	NA	NA
AXK99208.1|4996613_4996946_-	quaternary ammonium compound efflux SMR transporter QacL	NA	E5E3Y9	Acinetobacter_phage	34.3	3.5e-08
AXK99209.1|4997196_4998156_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	40.5	1.7e-47
AXK99210.1|4998046_4998751_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXK99211.1|4998741_4998939_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99212.1|4998979_4999783_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	Q75ZG1	Hepacivirus	34.3	4.9e-24
AXK99213.1|4999782_5000619_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA	NA
AXK99214.1|5000742_5001108_-	DUF3742 domain-containing protein	NA	NA	NA	NA	NA
AXK99215.1|5001192_5001825_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99216.1|5001837_5002464_-|integrase	integrase	integrase	NA	NA	NA	NA
AXK99217.1|5002783_5004628_+	relaxase	NA	NA	NA	NA	NA
AXK99218.1|5004708_5007360_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	33.9	5.2e-155
5006188:5006203	attR	CACGCCACCGGCCAGG	NA	NA	NA	NA
AXK99219.1|5007385_5009251_-	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	37.1	3.4e-52
AXK99220.1|5009311_5010625_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.2	1.3e-77
AXK99221.1|5010676_5011984_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AXK99222.1|5012002_5012833_-	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
AXK99223.1|5012891_5014226_-	DUF3422 domain-containing protein	NA	NA	NA	NA	NA
AXK99224.1|5014408_5014807_-	VOC family protein	NA	NA	NA	NA	NA
AXK99225.1|5014850_5015960_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	30.4	2.9e-35
AXK99226.1|5016019_5016295_-	regulator	NA	NA	NA	NA	NA
AXK99227.1|5016577_5017468_-	nitrilase	NA	NA	NA	NA	NA
AXK99228.1|5017464_5018073_-	GNAT family acetyltransferase	NA	NA	NA	NA	NA
AXK99229.1|5018074_5018482_-	isopropylmalate/homocitrate/citramalate synthase	NA	NA	NA	NA	NA
AXK99230.1|5018636_5019542_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXK99231.1|5019692_5021669_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
AXK99232.1|5021882_5022101_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99876.1|5022044_5022476_-	DUF488 domain-containing protein	NA	NA	NA	NA	NA
AXK99233.1|5022883_5023222_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AXK99234.1|5023282_5024833_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	42.0	4.5e-90
>prophage 1
CP026131	Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence	164510	5197	19003	164510	transposase	Enterobacteria_phage(18.18%)	18	NA	NA
AXK99903.1|5197_6178_-|transposase	IS5 family transposase ISKpn26	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
AXL00085.1|6691_7087_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99904.1|7083_7695_+	DUF2913 domain-containing protein	NA	NA	NA	NA	NA
AXK99905.1|7691_8642_-|transposase	ISNCY family transposase	transposase	Q2A0A7	Sodalis_phage	55.6	6.6e-76
AXK99906.1|8788_8989_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99907.1|9042_9675_-	LacI family DNA-binding transcriptional regulator	NA	A0A1V0E035	Clostridioides_phage	31.9	2.5e-07
AXK99908.1|10037_11243_+	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	89.2	1.1e-205
AXK99909.1|11239_12211_+	chromosome partitioning protein ParB	NA	Q1MVJ4	Enterobacteria_phage	68.9	1.4e-113
AXK99910.1|12346_13618_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.0	6.1e-154
AXK99911.1|13617_14040_-	peptidase	NA	A0A1W6JNS2	Morganella_phage	51.5	3.1e-30
AXK99912.1|14219_14891_-	DNA breaking-rejoining protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	61.7	5.1e-83
AXK99913.1|15249_15927_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.9	1.6e-28
AXK99914.1|15926_16148_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99915.1|16158_16578_+	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AXK99916.1|16631_17411_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99917.1|17815_18322_+	antirestriction protein	NA	A0A1I9S7Y0	Rhodococcus_phage	31.8	4.8e-09
AXK99918.1|18364_18556_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99919.1|18742_19003_+	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	46.2	4.1e-12
>prophage 2
CP026131	Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence	164510	48770	57953	164510		Escherichia_phage(42.86%)	10	NA	NA
AXK99962.1|48770_49472_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.2	1.6e-26
AXK99963.1|49908_50139_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99964.1|50201_50873_-	Mediator of plasmid stability	NA	NA	NA	NA	NA
AXK99965.1|50875_51847_-	StbA family protein	NA	A0A222YXF2	Escherichia_phage	46.8	1.1e-73
AXK99966.1|52095_53580_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AXK99967.1|53579_53831_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99968.1|53989_54421_+	peptidase	NA	A0A1W6JNS2	Morganella_phage	53.3	2.1e-29
AXK99969.1|54420_55692_+	DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.7	7.5e-152
AXK99970.1|55773_56751_-	chromosome partitioning protein ParB	NA	Q38420	Escherichia_phage	53.8	1.4e-86
AXK99971.1|56747_57953_-	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.3	5.3e-163
>prophage 3
CP026131	Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence	164510	73092	85483	164510	transposase	Escherichia_phage(62.5%)	10	NA	NA
AXK99985.1|73092_73518_-	antirestriction protein	NA	A0A2D0W8Z5	Bordetella_virus	37.3	5.3e-17
AXK99986.1|73628_73907_-	hypothetical protein	NA	NA	NA	NA	NA
AXK99987.1|75449_76010_+|transposase	transposase	transposase	A0A1B0V7I5	Salmonella_phage	100.0	1.1e-59
AXK99988.1|76013_78980_+|transposase	Tn3-like element TnAs1 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	100.0	0.0e+00
AXK99989.1|79220_80081_+	class A extended-spectrum beta-lactamase SHV-12	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
AXK99990.1|80101_80863_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
AXK99991.1|80853_81087_+	hypothetical protein	NA	NA	NA	NA	NA
AXK99992.1|81124_82027_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
AXK99993.1|83660_84365_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXK99994.1|84778_85483_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
>prophage 4
CP026131	Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence	164510	137135	151763	164510	transposase,protease	Escherichia_phage(44.44%)	14	NA	NA
AXL00056.1|137135_137840_+|transposase	IS6 family transposase IS15DI	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
AXL00057.1|138289_139045_-	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA	NA
AXL00058.1|139214_140075_-	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
AXL00096.1|140257_140794_-	recombinase	NA	Q1MVP4	Enterobacteria_phage	100.0	2.8e-84
AXL00059.1|140885_141074_+	hypothetical protein	NA	NA	NA	NA	NA
AXL00060.1|141751_142456_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXL00061.1|142492_142687_-	hypothetical protein	NA	Q1MVP5	Enterobacteria_phage	100.0	4.8e-26
AXL00062.1|143566_144271_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXL00063.1|146021_146990_-|transposase	IS5-like element IS903B family transposase	transposase	A0A1B0VFY5	Salmonella_phage	100.0	1.6e-186
AXL00064.1|147024_147900_-	class A extended-spectrum beta-lactamase CTX-M-65	NA	A0A1B0VBP7	Salmonella_phage	98.9	6.8e-152
AXL00065.1|148410_149115_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AXL00066.1|150324_150429_-	hypothetical protein	NA	NA	NA	NA	NA
AXL00067.1|150425_150890_-	mRNA interferase PemK	NA	NA	NA	NA	NA
AXL00068.1|151109_151763_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
