The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP022720	Staphylococcus aureus strain 135 chromosome, complete genome	2730989	712438	720258	2730989		Hokovirus(16.67%)	10	NA	NA
AXJ30106.1|712438_713494_-	Histidine protein kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
AXJ30107.1|713493_714180_-	Response regulator SaeR	NA	NA	NA	NA	NA
AXJ30108.1|714154_714628_-	DoxX	NA	NA	NA	NA	NA
AXJ30109.1|714969_715410_-	Electron transfer DM13	NA	NA	NA	NA	NA
AXJ30110.1|715689_716274_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ30111.1|716372_717086_-	7-carboxy-7-deazaguanine synthase	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
AXJ30112.1|717089_717509_-	6-carboxy-5,6,7,8-tetrahydropterin synthase	NA	S4U060	uncultured_phage	28.7	6.3e-07
AXJ30113.1|717510_718179_-	7-cyano-7-deazaguanine synthase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
AXJ30114.1|718529_719123_+	Anthranilate synthase component 2	NA	A0A0P0IKJ1	Acinetobacter_phage	43.5	1.2e-38
AXJ30115.1|719106_720258_+	Aminodeoxychorismate synthase component 1	NA	S4VNU7	Pandoravirus	36.1	3.5e-23
>prophage 2
CP022720	Staphylococcus aureus strain 135 chromosome, complete genome	2730989	732229	746848	2730989		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
AXJ30124.1|732229_733288_+	Histidinol-phosphate aminotransferase	NA	A0A0H3TLT9	Faustovirus	27.3	1.5e-20
AXJ30125.1|733638_734181_+	Putative 5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AXJ30126.1|734804_735722_-	Putative lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
AXJ30127.1|735991_737497_-	Di-/tripeptide transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AXJ30128.1|737837_738338_-	NADPH-dependent 7-cyano-7-deazaguanine reductase	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
AXJ30129.1|738357_739224_-	EamA-like transporter family protein	NA	NA	NA	NA	NA
AXJ30130.1|740024_740423_+	ribonucleotide reductase stimulatory protein	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
AXJ30131.1|740385_742491_+	Ribonucleoside-diphosphate reductase subunit alpha 2	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AXJ30132.1|742608_743580_+	Ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AXJ30133.1|744133_745147_+	Fe(3+) dicitrate transport system permease protein FecD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.0	2.2e-138
AXJ30134.1|745133_746090_+	Iron-uptake system permease protein FeuC	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AXJ30135.1|746086_746848_+	putative siderophore transport system ATP-binding protein YusV	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 3
CP022720	Staphylococcus aureus strain 135 chromosome, complete genome	2730989	997156	1005629	2730989		Synechococcus_phage(33.33%)	9	NA	NA
AXJ30369.1|997156_997639_+	N5-carboxyaminoimidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
AXJ30370.1|997625_998750_+	N5-carboxyaminoimidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AXJ30371.1|998753_999458_+	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.6	8.1e-47
AXJ30372.1|999457_999721_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AXJ30373.1|999722_1000394_+	Phosphoribosylformylglycinamidine synthase 1	NA	NA	NA	NA	NA
AXJ30374.1|1000386_1002576_+	Phosphoribosylformylglycinamidine synthase 2	NA	A6N228	Microbacterium_phage	39.8	2.7e-141
AXJ30375.1|1002554_1004039_+	Amidophosphoribosyltransferase precursor	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
AXJ30376.1|1004031_1005060_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	4.5e-62
AXJ30377.1|1005062_1005629_+	Phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.7	7.2e-30
>prophage 4
CP022720	Staphylococcus aureus strain 135 chromosome, complete genome	2730989	1446254	1533144	2730989	head,portal,lysis,tail,terminase,capsid,protease,tRNA,holin	Staphylococcus_phage(72.73%)	101	NA	NA
AXJ30758.1|1446254_1447547_-|tRNA	Asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
AXJ30759.1|1447868_1450562_-	hypothetical protein	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
AXJ30760.1|1450585_1451557_-	Bifunctional ligase/repressor BirA	NA	NA	NA	NA	NA
AXJ30761.1|1451543_1452746_-	CCA-adding enzyme	NA	H7BUW3	unidentified_phage	42.0	1.2e-34
AXJ30762.1|1452750_1453893_-	GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase	NA	NA	NA	NA	NA
AXJ30763.1|1454133_1454451_-	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
AXJ30764.1|1454787_1455486_-	Putative neutral zinc metallopeptidase	NA	NA	NA	NA	NA
AXJ30765.1|1455539_1456127_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ30766.1|1456116_1456704_-	hypothetical protein	NA	G3MAV7	Bacillus_virus	27.2	2.8e-08
AXJ30767.1|1456705_1457950_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AXJ30768.1|1457956_1459255_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AXJ30769.1|1459264_1460329_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
AXJ30770.1|1460354_1461521_-	Chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	7.6e-34
AXJ30771.1|1461906_1462107_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ30772.1|1462315_1462765_-	Nucleoside diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
AXJ30773.1|1462856_1463816_-	Heptaprenyl diphosphate synthase component 2	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
AXJ30774.1|1463817_1464543_-	Demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
AXJ30775.1|1464545_1465118_-	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1	NA	NA	NA	NA	NA
AXJ30776.1|1465548_1465821_-	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
AXJ30777.1|1465991_1466990_-	Glycerol-3-phosphate dehydrogenase [NAD(P)+]	NA	NA	NA	NA	NA
AXJ30778.1|1467006_1468317_-	GTPase Der	NA	NA	NA	NA	NA
AXJ30779.1|1468538_1469714_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
AXJ30780.1|1470411_1471071_-	Cytidylate kinase	NA	NA	NA	NA	NA
AXJ30781.1|1471147_1472116_+	putative L-asparaginase	NA	NA	NA	NA	NA
AXJ30782.1|1472230_1473217_-	Glucosaminate ammonia-lyase	NA	NA	NA	NA	NA
AXJ30783.1|1473618_1475073_-	Elastin-binding protein EbpS	NA	NA	NA	NA	NA
AXJ30784.1|1475225_1476605_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.3	3.8e-56
AXJ30785.1|1476594_1477548_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ30786.1|1477655_1477904_+	Ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
AXJ30787.1|1478009_1478555_-	Riboflavin transporter RibU	NA	NA	NA	NA	NA
AXJ30788.1|1478956_1479889_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ30789.1|1479945_1480863_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ30790.1|1480920_1481826_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ30791.1|1481916_1482168_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.4e-25
AXJ30792.1|1482551_1483337_-	hypothetical protein	NA	D2JLG6	Staphylococcus_phage	98.1	1.8e-140
AXJ30793.1|1483952_1485407_-	putative cell wall hydrolase LytN precursor	NA	Q8SDN4	Staphylococcus_virus	99.8	7.5e-289
AXJ30794.1|1485417_1485720_-|holin,lysis	Phage lysis protein, holin	holin,lysis	B7T0L0	Staphylococcus_virus	100.0	4.1e-48
AXJ30795.1|1485855_1486155_-	hypothetical protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AXJ30796.1|1486200_1486365_-	hypothetical protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AXJ30797.1|1486357_1486747_-	hypothetical protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
AXJ30798.1|1486746_1488213_-	hypothetical protein	NA	Q8SDN8	Staphylococcus_virus	100.0	3.4e-257
AXJ30799.1|1488212_1490123_-	hypothetical protein	NA	A0A2I6PF35	Staphylococcus_phage	100.0	0.0e+00
AXJ30800.1|1490138_1490429_-	hypothetical protein	NA	Q8SDP0	Staphylococcus_virus	100.0	2.1e-49
AXJ30801.1|1490428_1492012_-|tail	Prophage endopeptidase tail	tail	Q8SDP1	Staphylococcus_virus	100.0	7.1e-309
AXJ30802.1|1492020_1492845_-|tail	Phage tail protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
AXJ30803.1|1492844_1495322_-	Glycyl-glycine endopeptidase ALE-1 precursor	NA	U5U762	Staphylococcus_phage	98.3	0.0e+00
AXJ30804.1|1495285_1499044_-	Chromosome partition protein Smc	NA	A0A2I6PDD9	Staphylococcus_phage	98.5	0.0e+00
AXJ30805.1|1499057_1499216_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AXJ30806.1|1499257_1499608_-	hypothetical protein	NA	A0A2I6PDE6	Staphylococcus_phage	100.0	1.1e-55
AXJ30807.1|1499665_1500121_-	Bacterial Ig-like domain (group 2)	NA	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
AXJ30808.1|1500212_1500854_-|tail	Phage major tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
AXJ30809.1|1500888_1501284_-	hypothetical protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
AXJ30810.1|1501284_1501686_-	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
AXJ30811.1|1501682_1502015_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
AXJ30812.1|1502026_1502305_-|head,tail	Phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
AXJ30813.1|1502373_1503537_-|capsid	Phage capsid family protein	capsid	A0A2I6PDD7	Staphylococcus_phage	100.0	9.4e-218
AXJ30814.1|1503548_1504322_-|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	M1TAZ4	Staphylococcus_phage	100.0	9.2e-137
AXJ30815.1|1504305_1505544_-|portal	Phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	100.0	6.9e-235
AXJ30816.1|1505548_1507240_-	Phage Terminase	NA	A0A2I6PE44	Staphylococcus_phage	99.8	0.0e+00
AXJ30817.1|1507229_1507535_-|terminase	Phage terminase, small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
AXJ30818.1|1507663_1507978_-	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
AXJ30819.1|1508134_1508572_-	hypothetical protein	NA	A0A2K9VBV2	Staphylococcus_phage	99.3	7.9e-77
AXJ30820.1|1508584_1509943_-	hypothetical protein	NA	A0A2K9VBW3	Staphylococcus_phage	100.0	4.3e-262
AXJ30821.1|1509932_1510223_-	VRR-NUC domain protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
AXJ30822.1|1510563_1513011_-	Virulence-associated protein E	NA	Q4ZCG0	Staphylococcus_virus	100.0	0.0e+00
AXJ30823.1|1513062_1513263_-	hypothetical protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
AXJ30824.1|1513330_1513483_-	Transcriptional activator RinB	NA	A7TWI2	Staphylococcus_phage	100.0	2.6e-19
AXJ30825.1|1513479_1513686_-	hypothetical protein	NA	A0A1X9H0C2	Staphylococcus_phage	100.0	1.3e-21
AXJ30826.1|1513722_1514259_-	dUTPase	NA	A0A1X9H0S5	Staphylococcus_phage	100.0	1.4e-96
AXJ30827.1|1514251_1514662_-	hypothetical protein	NA	C8CH13	Staphylococcus_phage	100.0	2.3e-70
AXJ30828.1|1514658_1515192_-	hypothetical protein	NA	A0A1X9H0D4	Staphylococcus_phage	96.1	8.5e-81
AXJ30829.1|1515188_1515536_-	YopX protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
AXJ30830.1|1515532_1515934_-	hypothetical protein	NA	A0A0N7E0T5	Staphylococcus_phage	100.0	7.0e-72
AXJ30831.1|1515936_1516143_-	hypothetical protein	NA	A0A0N9BAW9	Staphylococcus_phage	100.0	3.0e-34
AXJ30832.1|1516156_1516399_-	hypothetical protein	NA	Q8SDR2	Staphylococcus_virus	100.0	2.5e-40
AXJ30833.1|1516413_1516614_-	hypothetical protein	NA	A0A2I6PF32	Staphylococcus_phage	100.0	1.3e-29
AXJ30834.1|1516616_1516874_-	hypothetical protein	NA	A0A2I6PF10	Staphylococcus_phage	100.0	5.7e-43
AXJ30835.1|1516873_1517275_-	PVL ORF-50-like family protein	NA	A0A2I6PF14	Staphylococcus_phage	100.0	1.2e-68
AXJ30836.1|1517274_1517460_-	hypothetical protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
AXJ30837.1|1517472_1519434_-	DNA polymerase I, thermostable	NA	A0A2I6PF18	Staphylococcus_phage	100.0	0.0e+00
AXJ30838.1|1519493_1520051_-	hypothetical protein	NA	A0A2I6PF05	Staphylococcus_phage	100.0	1.8e-97
AXJ30839.1|1520076_1521243_-	PD-(D/E)XK nuclease superfamily protein	NA	A0A2I6PDL4	Staphylococcus_phage	100.0	8.3e-222
AXJ30840.1|1521239_1521602_-	hypothetical protein	NA	A0A2K9VBV1	Staphylococcus_phage	100.0	6.4e-56
AXJ30841.1|1521616_1521940_-	hypothetical protein	NA	A7TWG2	Staphylococcus_phage	99.1	2.5e-51
AXJ30842.1|1522018_1522180_-	hypothetical protein	NA	A0A2I6PDF7	Staphylococcus_phage	96.2	1.2e-19
AXJ30843.1|1522191_1522455_-	hypothetical protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
AXJ30844.1|1522479_1522695_-	hypothetical protein	NA	A0A2I6PDN5	Staphylococcus_phage	95.8	5.5e-31
AXJ30845.1|1522750_1522981_+	hypothetical protein	NA	A0A2I6PE22	Staphylococcus_phage	97.4	1.8e-35
AXJ30846.1|1522977_1523154_-	hypothetical protein	NA	B7T0F9	Staphylococcus_virus	98.3	1.3e-25
AXJ30847.1|1523242_1523434_-	helix-turn-helix protein	NA	A0A2I6PEL6	Staphylococcus_phage	100.0	2.3e-28
AXJ30848.1|1523594_1523924_+	helix-turn-helix protein	NA	A0A2I6PEN2	Staphylococcus_phage	100.0	3.2e-54
AXJ30849.1|1523927_1524398_+	hypothetical protein	NA	A0A2I6PEK4	Staphylococcus_phage	99.4	5.3e-87
AXJ30850.1|1524415_1524850_+	hypothetical protein	NA	A0A2I6PEM0	Staphylococcus_phage	100.0	1.2e-24
AXJ30851.1|1524878_1525274_+	hypothetical protein	NA	A0A2I6PEJ7	Staphylococcus_phage	99.2	1.1e-69
AXJ30852.1|1525384_1525510_+	hypothetical protein	NA	A0A2I6PF02	Staphylococcus_phage	100.0	5.1e-13
AXJ30853.1|1525506_1526121_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	99.5	8.8e-106
AXJ30854.1|1526246_1527452_+	Transposase	NA	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
AXJ30855.1|1527494_1529489_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	95.8	4.1e-112
AXJ30856.1|1529533_1530442_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ30857.1|1530686_1532438_-	Sensor protein SrrB	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
AXJ30858.1|1532418_1533144_-	Transcriptional regulatory protein SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 5
CP022720	Staphylococcus aureus strain 135 chromosome, complete genome	2730989	1591965	1600295	2730989	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
AXJ30922.1|1591965_1592751_-	High-affinity zinc uptake system ATP-binding protein ZnuC	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
AXJ30923.1|1592876_1593767_-	putative endonuclease 4	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
AXJ30924.1|1593776_1595123_-	DEAD-box ATP-dependent RNA helicase CshB	NA	A0A1V0SIR5	Klosneuvirus	34.0	1.8e-55
AXJ30925.1|1595236_1596337_-	Putative GTP cyclohydrolase 1 type 2	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
AXJ30926.1|1596339_1597017_-|tRNA	tRNA (adenine(22)-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
AXJ30927.1|1597147_1598254_-	RNA polymerase sigma factor SigA	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
AXJ30928.1|1598477_1600295_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.6e-54
>prophage 6
CP022720	Staphylococcus aureus strain 135 chromosome, complete genome	2730989	1668149	1677192	2730989	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AXJ30998.1|1668149_1668668_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
AXJ30999.1|1668689_1670963_-	Single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
AXJ31000.1|1671165_1673445_-	bifunctional preprotein translocase subunit SecD/SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AXJ31001.1|1673719_1673980_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AXJ31002.1|1673998_1675138_-|tRNA	Queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AXJ31003.1|1675160_1676186_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AXJ31004.1|1676187_1677192_-	Holliday junction ATP-dependent DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 7
CP022720	Staphylococcus aureus strain 135 chromosome, complete genome	2730989	1801708	1874849	2730989	tRNA,protease	Staphylococcus_phage(89.09%)	72	NA	NA
AXJ31108.1|1801708_1808269_-	Extracellular matrix-binding protein ebh precursor	NA	A0A2H4PQU6	Staphylococcus_phage	97.1	1.3e-300
AXJ31109.1|1808594_1808906_-	molybdopterin biosynthesis-like protein MoeZ	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
AXJ31110.1|1808927_1811345_-|tRNA	Leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
AXJ31111.1|1811632_1812814_-	Multidrug resistance protein MdtH	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
AXJ31112.1|1812923_1813877_+	coproporphyrinogen III oxidase	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AXJ31113.1|1813873_1814437_+	16S rRNA m(4)C1402 methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
AXJ31114.1|1814556_1814958_-	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
AXJ31115.1|1815529_1816357_-	Phospholipase YtpA	NA	NA	NA	NA	NA
AXJ31116.1|1816590_1817592_+	Proline dehydrogenase 1	NA	A0A2H4PQT6	Staphylococcus_phage	99.1	7.7e-184
AXJ31117.1|1817713_1818178_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
AXJ31118.1|1818190_1819372_-	Riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	1.5e-226
AXJ31119.1|1819382_1820015_-	Riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.0	6.4e-112
AXJ31120.1|1820021_1821053_-	Riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	4.8e-197
AXJ31121.1|1821545_1823048_-	hypothetical protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
AXJ31122.1|1823570_1823885_+	Transcriptional repressor SdpR	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
AXJ31123.1|1823884_1825177_+	Arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
AXJ31124.1|1825194_1825590_+	Arsenate-mycothiol transferase ArsC2	NA	A0A2H4PQT9	Staphylococcus_phage	99.2	3.1e-72
AXJ31125.1|1825884_1826739_-	Bifunctional autolysin precursor	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
AXJ31126.1|1827014_1827239_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ31127.1|1827437_1827908_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
AXJ31128.1|1828020_1828464_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ31129.1|1828450_1828894_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
AXJ31130.1|1829189_1829825_+|protease	CAAX amino terminal protease self- immunity	protease	NA	NA	NA	NA
AXJ31131.1|1830264_1830978_-	Transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
AXJ31132.1|1831237_1831540_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ31133.1|1831795_1832161_+	Putative fluoride ion transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
AXJ31134.1|1832157_1832511_+	Putative fluoride ion transporter CrcB	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
AXJ31135.1|1833068_1833323_+	hypothetical protein	NA	A0ZS58	Staphylococcus_virus	97.6	2.2e-39
AXJ31136.1|1833353_1833848_+	hypothetical protein	NA	Q9MBP7	Staphylococcus_prophage	92.4	3.8e-51
AXJ31137.1|1833862_1834216_+	hypothetical protein	NA	A0A146ICT8	Staphylococcus_phage	96.6	7.3e-65
AXJ31138.1|1834234_1834546_+	Transposase DDE domain protein	NA	Q9MBP7	Staphylococcus_prophage	92.2	3.6e-47
AXJ31139.1|1834608_1835442_-	Glyoxal reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.6	3.5e-158
AXJ31140.1|1835653_1836562_-	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.0	1.7e-137
AXJ31141.1|1836686_1837880_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
AXJ31142.1|1838251_1839844_+	Phosphoenolpyruvate carboxykinase [ATP]	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
AXJ31143.1|1840221_1840992_-	Prolyl oligopeptidase family protein	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.1e-142
AXJ31144.1|1840972_1841452_-	Putative 8-oxo-dGTP diphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	100.0	1.7e-85
AXJ31145.1|1841511_1841769_+	Putative membrane protein insertion efficiency factor	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AXJ31146.1|1841765_1842767_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.0	9.0e-185
AXJ31147.1|1842771_1844250_-	2-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
AXJ31148.1|1844408_1844891_-	hypothetical protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	1.2e-78
AXJ31149.1|1845202_1845817_+	SPBc2 prophage-derived endonuclease YokF precursor	NA	A0A2H4PQM8	Staphylococcus_phage	87.3	9.5e-36
AXJ31150.1|1845897_1846893_+	Telomeric repeat-binding factor 2	NA	A0A2H4PQN2	Staphylococcus_phage	98.8	6.2e-77
AXJ31151.1|1846968_1847595_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	93.8	5.3e-90
AXJ31152.1|1847635_1847977_+	hypothetical protein	NA	A0A2H4PQN6	Staphylococcus_phage	95.6	3.0e-55
AXJ31153.1|1848077_1848650_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	96.6	1.1e-25
AXJ31154.1|1848847_1849405_-	hypothetical protein	NA	A0A2H4PQN8	Staphylococcus_phage	96.8	3.7e-79
AXJ31155.1|1849775_1849952_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ31156.1|1851059_1851503_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ31157.1|1851502_1851946_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ31158.1|1851945_1852389_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ31159.1|1852813_1855351_+	Hyaluronate lyase precursor	NA	NA	NA	NA	NA
AXJ31160.1|1855474_1855852_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ31161.1|1856057_1856498_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ31162.1|1856542_1858156_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ31163.1|1858170_1858470_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ31164.1|1858596_1859832_-	Type I restriction modification DNA specificity domain protein	NA	A0A2H4PQP5	Staphylococcus_phage	37.2	6.4e-47
AXJ31165.1|1859824_1861381_-	putative type I restriction enzymeP M protein	NA	A0A2H4PQP4	Staphylococcus_phage	99.0	3.4e-287
AXJ31166.1|1861745_1862465_-|protease	Serine protease SplF precursor	protease	A0A2H4PQP1	Staphylococcus_phage	99.2	1.2e-130
AXJ31167.1|1862615_1863332_-|protease	Serine protease SplE precursor	protease	A0A2H4PQN5	Staphylococcus_phage	99.6	3.2e-131
AXJ31168.1|1863489_1864209_-|protease	Serine protease SplD precursor	protease	A0A2H4PQP9	Staphylococcus_phage	97.9	4.3e-128
AXJ31169.1|1864329_1865049_-|protease	Serine protease SplC precursor	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	3.5e-130
AXJ31170.1|1865106_1865829_-|protease	Serine protease SplB precursor	protease	A0A2H4PQN0	Staphylococcus_phage	99.2	1.2e-130
AXJ31171.1|1865953_1866646_-|protease	Serine protease SplA precursor	protease	A0A2H4PQN3	Staphylococcus_phage	95.7	1.9e-120
AXJ31172.1|1867624_1868194_+	hypothetical protein	NA	A0A2H4PQH6	Staphylococcus_phage	62.6	2.6e-51
AXJ31173.1|1868665_1868938_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	81.2	3.1e-31
AXJ31174.1|1869139_1869613_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ31175.1|1869617_1870409_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ31176.1|1870778_1871762_-	Leucotoxin LukDv precursor	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
AXJ31177.1|1871763_1872699_-	Leucotoxin LukEv precursor	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
AXJ31178.1|1873592_1874048_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	1.7e-61
AXJ31179.1|1874060_1874849_+	hypothetical protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.0	1.0e-138
>prophage 8
CP022720	Staphylococcus aureus strain 135 chromosome, complete genome	2730989	1998839	2005090	2730989		Staphylococcus_phage(100.0%)	6	NA	NA
AXJ31288.1|1998839_1999040_+	Phospholipase C precursor	NA	A0A1P8L6A7	Staphylococcus_phage	100.0	3.4e-27
AXJ31289.1|2000214_2000565_-	Complement inhibitor precursor	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
AXJ31290.1|2001247_2001697_+	Chemotaxis inhibitory protein precursor	NA	A7TWR9	Staphylococcus_phage	100.0	1.5e-78
AXJ31291.1|2001937_2002759_+	Phospholipase C precursor	NA	A0A1P8L6H7	Staphylococcus_phage	100.0	5.4e-159
AXJ31292.1|2002996_2004013_-	putative leukocidin-like protein 1 precursor	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
AXJ31293.1|2004034_2005090_-	putative leukocidin-like protein 2 precursor	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
