The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	310292	353163	2814270	tail,holin,capsid,lysis,protease,head,portal,terminase	Staphylococcus_phage(88.06%)	67	NA	NA
AXJ24617.1|310292_311498_-	Tyrosine recombinase XerC	NA	A7YGM7	Staphylococcus_virus	98.8	1.0e-219
AXJ24618.1|311623_312238_+	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
AXJ24619.1|312234_312360_-	hypothetical protein	NA	A0A2I6PF02	Staphylococcus_phage	100.0	5.1e-13
AXJ24620.1|312417_312600_-	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
AXJ24621.1|312670_313402_-	LexA repressor	NA	S4SVC5	Staphylococcus_phage	99.2	1.3e-132
AXJ24622.1|313553_313766_+	helix-turn-helix protein	NA	A7TWF1	Staphylococcus_phage	100.0	1.6e-30
AXJ24623.1|313813_314257_+	hypothetical protein	NA	A7TWF2	Staphylococcus_phage	100.0	8.9e-76
AXJ24624.1|314271_314421_+	hypothetical protein	NA	D2JGJ0	Staphylococcus_phage	100.0	1.4e-20
AXJ24625.1|314461_314674_-	hypothetical protein	NA	D2JGJ1	Staphylococcus_phage	100.0	7.6e-33
AXJ24626.1|314743_314941_+	hypothetical protein	NA	A7TWF5	Staphylococcus_phage	100.0	4.6e-24
AXJ24627.1|314927_315308_-	hypothetical protein	NA	Q4ZCQ5	Staphylococcus_virus	100.0	5.8e-68
AXJ24628.1|315374_315620_+	hypothetical protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
AXJ24629.1|315588_315954_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
AXJ24630.1|316008_316224_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
AXJ24631.1|316248_316512_+	hypothetical protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
AXJ24632.1|316524_316686_+	hypothetical protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
AXJ24633.1|316764_317088_+	hypothetical protein	NA	A0A2I6PDL5	Staphylococcus_phage	100.0	1.3e-52
AXJ24634.1|317102_317465_+	hypothetical protein	NA	Q4ZCP8	Staphylococcus_virus	99.2	1.4e-55
AXJ24635.1|317461_318628_+	PD-(D/E)XK nuclease superfamily protein	NA	A0A2I6PDL4	Staphylococcus_phage	100.0	8.3e-222
AXJ24636.1|318653_319211_+	hypothetical protein	NA	A0A2K9VBT2	Staphylococcus_phage	99.5	2.0e-96
AXJ24637.1|319270_321232_+	DNA polymerase I, thermostable	NA	A0A2K9VBT3	Staphylococcus_phage	98.6	0.0e+00
AXJ24638.1|321244_321430_+	hypothetical protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
AXJ24639.1|321429_321831_+	PVL ORF-50-like family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
AXJ24640.1|321830_322085_+	hypothetical protein	NA	Q6R831	Staphylococcus_virus	97.6	8.2e-42
AXJ24641.1|322090_322333_+	hypothetical protein	NA	A0A2I6PF06	Staphylococcus_phage	100.0	5.0e-41
AXJ24642.1|322347_322512_+	hypothetical protein	NA	A0A2I6PF20	Staphylococcus_phage	100.0	7.6e-25
AXJ24643.1|322504_322657_+	hypothetical protein	NA	Q9G015	Staphylococcus_virus	100.0	3.3e-22
AXJ24644.1|322653_322938_+	hypothetical protein	NA	Q9G014	Staphylococcus_virus	98.9	8.0e-46
AXJ24645.1|322930_323185_+	hypothetical protein	NA	A7TWH5	Staphylococcus_phage	91.7	1.4e-36
AXJ24646.1|323171_323342_+	hypothetical protein	NA	A0A1W6JQ22	Staphylococcus_phage	98.2	9.7e-23
AXJ24647.1|323334_323862_+	Deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	A0A2I6PE85	Staphylococcus_phage	99.4	3.0e-94
AXJ24648.1|323898_324105_+	hypothetical protein	NA	A0A0H3U2R7	Staphylococcus_phage	77.9	8.4e-21
AXJ24649.1|324101_324296_+	hypothetical protein	NA	S4SX95	Staphylococcus_phage	95.3	1.9e-27
AXJ24650.1|324292_324496_+	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
AXJ24651.1|324488_324725_+	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
AXJ24652.1|324714_325104_+	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	100.0	3.6e-65
AXJ24653.1|325100_325253_+	Transcriptional activator RinB	NA	A7TWI2	Staphylococcus_phage	100.0	2.6e-19
AXJ24654.1|325320_325521_+	hypothetical protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
AXJ24655.1|325572_328020_+	Virulence-associated protein E	NA	R4WAL1	Staphylococcus_phage	100.0	0.0e+00
AXJ24656.1|328360_328651_+	VRR-NUC domain protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
AXJ24657.1|328640_328922_+	hypothetical protein	NA	A0A1X9IH01	Staphylococcus_phage	100.0	1.0e-45
AXJ24658.1|329005_329995_+	hypothetical protein	NA	A0A2I6PER4	Staphylococcus_phage	100.0	5.2e-185
AXJ24659.1|330007_330445_+	hypothetical protein	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
AXJ24660.1|330601_330916_+	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
AXJ24661.1|331044_331350_+|terminase	Phage terminase, small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
AXJ24662.1|331339_333031_+	Phage Terminase	NA	A0A2I6PE44	Staphylococcus_phage	100.0	0.0e+00
AXJ24663.1|333035_334274_+|portal	Phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	99.8	2.6e-234
AXJ24664.1|334257_335031_+|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
AXJ24665.1|335042_336206_+|capsid	Phage capsid family protein	capsid	A0A2I6PE62	Staphylococcus_phage	99.7	6.1e-217
AXJ24666.1|336274_336553_+|head,tail	Phage gp6-like head-tail connector protein	head,tail	A0A2I6PE36	Staphylococcus_phage	100.0	2.1e-46
AXJ24667.1|336564_336897_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
AXJ24668.1|336893_337295_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
AXJ24669.1|337295_337691_+	hypothetical protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
AXJ24670.1|337725_338367_+|tail	Phage major tail protein	tail	A0A2I6PE59	Staphylococcus_phage	99.5	2.2e-120
AXJ24671.1|338458_338914_+	Bacterial Ig-like domain (group 2)	NA	Q9B0D4	Staphylococcus_phage	100.0	2.8e-77
AXJ24672.1|338971_339322_+	hypothetical protein	NA	A0A2I6PDE6	Staphylococcus_phage	100.0	1.1e-55
AXJ24673.1|339363_339522_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AXJ24674.1|339535_345736_+	Glycyl-glycine endopeptidase ALE-1 precursor	NA	A0A2I6PF36	Staphylococcus_phage	98.8	0.0e+00
AXJ24675.1|345735_346560_+|tail	Phage tail protein	tail	A0A2I6PER3	Staphylococcus_phage	99.6	3.5e-158
AXJ24676.1|346568_348152_+|tail	Prophage endopeptidase tail	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
AXJ24677.1|348151_348442_+	hypothetical protein	NA	A0A2I6PF46	Staphylococcus_phage	100.0	2.1e-49
AXJ24678.1|348457_350368_+	hypothetical protein	NA	U5U4Q1	Staphylococcus_phage	99.8	0.0e+00
AXJ24679.1|350367_351834_+	hypothetical protein	NA	A7TWK6	Staphylococcus_phage	100.0	7.6e-257
AXJ24680.1|351833_352223_+	hypothetical protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
AXJ24681.1|352215_352380_+	hypothetical protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AXJ24682.1|352425_352725_+	hypothetical protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AXJ24683.1|352860_353163_+|holin,lysis	Phage lysis protein, holin	holin,lysis	B7T0L0	Staphylococcus_virus	100.0	4.1e-48
>prophage 2
CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	745639	753459	2814270		Hokovirus(16.67%)	10	NA	NA
AXJ25030.1|745639_746695_-	Histidine protein kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
AXJ25031.1|746694_747381_-	Response regulator SaeR	NA	NA	NA	NA	NA
AXJ25032.1|747355_747829_-	DoxX	NA	NA	NA	NA	NA
AXJ25033.1|748170_748611_-	Electron transfer DM13	NA	NA	NA	NA	NA
AXJ25034.1|748890_749475_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ25035.1|749573_750287_-	7-carboxy-7-deazaguanine synthase	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
AXJ25036.1|750290_750710_-	6-carboxy-5,6,7,8-tetrahydropterin synthase	NA	S4U060	uncultured_phage	28.7	6.3e-07
AXJ25037.1|750711_751380_-	7-cyano-7-deazaguanine synthase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.1	9.6e-66
AXJ25038.1|751730_752324_+	Anthranilate synthase component 2	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	1.5e-38
AXJ25039.1|752307_753459_+	Aminodeoxychorismate synthase component 1	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
>prophage 3
CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	765431	779624	2814270		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
AXJ25048.1|765431_766490_+	Histidinol-phosphate aminotransferase	NA	A0A1X6WGT4	Pacmanvirus	26.4	2.3e-21
AXJ25049.1|766647_767190_+	Putative 5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AXJ25050.1|767795_768713_-	Putative lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.4	2.1e-07
AXJ25051.1|768994_770500_-	Di-/tripeptide transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AXJ25052.1|770839_771340_-	NADPH-dependent 7-cyano-7-deazaguanine reductase	NA	E7DN65	Pneumococcus_phage	70.8	2.2e-51
AXJ25053.1|771359_772226_-	EamA-like transporter family protein	NA	NA	NA	NA	NA
AXJ25054.1|773026_773425_+	ribonucleotide reductase stimulatory protein	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.7	4.3e-53
AXJ25055.1|773387_775493_+	Ribonucleoside-diphosphate reductase subunit alpha 2	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AXJ25056.1|775610_776582_+	Ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AXJ25057.1|776909_777920_+	Fe(3+) dicitrate transport system permease protein FecD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.2	4.2e-137
AXJ25058.1|777909_778866_+	Iron-uptake system permease protein FeuC	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AXJ25059.1|778862_779624_+	putative siderophore transport system ATP-binding protein YusV	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	5.0e-18
>prophage 4
CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1027911	1036384	2814270		Synechococcus_phage(33.33%)	9	NA	NA
AXJ25294.1|1027911_1028394_+	N5-carboxyaminoimidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	43.3	3.4e-20
AXJ25295.1|1028380_1029505_+	N5-carboxyaminoimidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AXJ25296.1|1029508_1030213_+	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	2.8e-47
AXJ25297.1|1030212_1030476_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AXJ25298.1|1030477_1031149_+	Phosphoribosylformylglycinamidine synthase 1	NA	NA	NA	NA	NA
AXJ25299.1|1031141_1033331_+	Phosphoribosylformylglycinamidine synthase 2	NA	A6N228	Microbacterium_phage	39.7	1.8e-140
AXJ25300.1|1033309_1034794_+	Amidophosphoribosyltransferase precursor	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
AXJ25301.1|1034786_1035815_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	3.8e-61
AXJ25302.1|1035817_1036384_+	Phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	8.0e-29
>prophage 5
CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1297858	1329302	2814270	protease,portal,capsid	Bacillus_phage(29.63%)	42	NA	NA
AXJ25539.1|1297858_1298818_-	Tyrosine recombinase XerC	NA	A0A0C5AN64	Paenibacillus_phage	31.5	1.5e-27
AXJ25540.1|1299037_1299733_-	Host cell surface-exposed lipoprotein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	34.5	3.4e-05
AXJ25541.1|1299744_1300128_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ25542.1|1300323_1301643_+	Transposase	NA	NA	NA	NA	NA
AXJ25543.1|1301799_1302192_-	transcriptional repressor DicA	NA	A0A2I6PE55	Staphylococcus_phage	53.6	2.7e-28
AXJ25544.1|1302359_1302578_+	hypothetical protein	NA	A0A2I6PE94	Staphylococcus_phage	62.5	4.9e-19
AXJ25545.1|1302604_1302880_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25546.1|1302884_1303019_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25547.1|1303049_1303148_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25548.1|1303144_1303315_+	hypothetical protein	NA	Q4ZDZ8	Staphylococcus_virus	89.3	1.8e-21
AXJ25549.1|1303303_1303510_-	hypothetical protein	NA	A1BTY8	Staphylococcus_virus	75.0	4.3e-25
AXJ25550.1|1303569_1304253_+	hypothetical protein	NA	A9CR56	Staphylococcus_phage	86.0	8.0e-108
AXJ25551.1|1304351_1304513_+	hypothetical protein	NA	R4IH12	Staphylococcus_phage	69.8	1.1e-12
AXJ25552.1|1304600_1304918_+	hypothetical protein	NA	W5RAK4	Staphylococcus_phage	74.5	9.0e-30
AXJ25553.1|1304907_1305174_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	53.6	3.9e-18
AXJ25554.1|1305178_1306429_+	hypothetical protein	NA	A0A1B1P7L4	Bacillus_phage	57.8	1.8e-134
AXJ25555.1|1306425_1306737_+	hypothetical protein	NA	A0A2P0ZLA7	Lactobacillus_phage	43.2	7.0e-19
AXJ25556.1|1306729_1307035_+	VRR-NUC domain protein	NA	A0A1B1P7M6	Bacillus_phage	59.3	5.8e-26
AXJ25557.1|1307024_1308851_+	PD-(D/E)XK nuclease superfamily protein	NA	A0A1B1P7N0	Bacillus_phage	56.3	2.6e-166
AXJ25558.1|1308868_1309075_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25559.1|1309120_1309603_+	hypothetical protein	NA	A0A2H4J1S8	uncultured_Caudovirales_phage	37.3	2.9e-19
AXJ25560.1|1309884_1311603_+	DNA polymerase II	NA	A0A1B1P7M5	Bacillus_phage	63.6	1.9e-211
AXJ25561.1|1311706_1312096_+	hypothetical protein	NA	U3PG42	Staphylococcus_phage	51.9	4.5e-07
AXJ25562.1|1312171_1312477_+	MazG nucleotide pyrophosphohydrolase domain protein	NA	A0A2H4JF73	uncultured_Caudovirales_phage	73.7	6.2e-36
AXJ25563.1|1312499_1312970_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ25564.1|1313390_1313582_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25565.1|1313613_1315419_+	hypothetical protein	NA	A0A1B1P7L5	Bacillus_phage	58.8	1.6e-208
AXJ25566.1|1315792_1316284_+	positive control sigma-like factor	NA	S5MAA9	Brevibacillus_phage	30.0	7.4e-07
AXJ25567.1|1316716_1317007_+	HNH endonuclease	NA	D2XR61	Bacillus_phage	43.2	1.3e-19
AXJ25568.1|1317325_1317658_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25569.1|1317641_1319285_+	Phage Terminase	NA	A0A0U4B089	Bacillus_phage	57.3	8.4e-180
AXJ25570.1|1319300_1320437_+|portal	Phage portal protein	portal	A0A2H4JBZ5	uncultured_Caudovirales_phage	41.4	7.8e-84
AXJ25571.1|1320436_1321123_+|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	A0A2H4J8Y7	uncultured_Caudovirales_phage	49.5	4.0e-43
AXJ25572.1|1321149_1322319_+|capsid	Phage capsid family protein	capsid	A0A0U4JIF4	Bacillus_phage	50.3	1.3e-97
AXJ25573.1|1322340_1322646_+	hypothetical protein	NA	A0A059T7R0	Listeria_phage	44.8	6.0e-15
AXJ25574.1|1322620_1322965_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25575.1|1322948_1323287_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25576.1|1323286_1323724_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25577.1|1323729_1324413_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25578.1|1324440_1324791_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25579.1|1324838_1325063_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ25580.1|1325120_1329302_+	Chromosome partition protein Smc	NA	Q9T0X1	Lactobacillus_phage	42.6	3.2e-58
>prophage 6
CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1613790	1622102	2814270	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
AXJ25826.1|1613790_1614576_-	High-affinity zinc uptake system ATP-binding protein ZnuC	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
AXJ25827.1|1614701_1615592_-	putative endonuclease 4	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
AXJ25828.1|1615601_1616948_-	DEAD-box ATP-dependent RNA helicase CshB	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
AXJ25829.1|1617061_1618162_-	Putative GTP cyclohydrolase 1 type 2	NA	A0A1S5V250	Saudi_moumouvirus	30.6	2.3e-08
AXJ25830.1|1618164_1618842_-|tRNA	tRNA (adenine(22)-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
AXJ25831.1|1618972_1620079_-	RNA polymerase sigma factor SigA	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
AXJ25832.1|1620302_1622102_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	1.3e-53
>prophage 7
CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1691574	1700617	2814270	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AXJ25901.1|1691574_1692093_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
AXJ25902.1|1692114_1694388_-	Single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
AXJ25903.1|1694590_1696870_-	bifunctional preprotein translocase subunit SecD/SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AXJ25904.1|1697144_1697405_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AXJ25905.1|1697423_1698563_-|tRNA	Queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AXJ25906.1|1698585_1699611_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AXJ25907.1|1699612_1700617_-	Holliday junction ATP-dependent DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1829451	1891558	2814270	protease,tRNA	Staphylococcus_phage(95.74%)	58	NA	NA
AXJ26014.1|1829451_1835991_-	Extracellular matrix-binding protein ebh precursor	NA	A0A2H4PQU6	Staphylococcus_phage	92.1	8.9e-289
AXJ26015.1|1836316_1836628_-	molybdopterin biosynthesis protein MoeB	NA	A0A2H4PQR9	Staphylococcus_phage	96.1	4.5e-50
AXJ26016.1|1836649_1839067_-|tRNA	Leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
AXJ26017.1|1839354_1840536_-	Multidrug resistance protein MdtH	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
AXJ26018.1|1840645_1841599_+	coproporphyrinogen III oxidase	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AXJ26019.1|1841595_1842159_+	16S rRNA m(4)C1402 methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
AXJ26020.1|1842278_1842680_-	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
AXJ26021.1|1843251_1844079_-	Phospholipase YtpA	NA	NA	NA	NA	NA
AXJ26022.1|1844312_1845314_+	Proline dehydrogenase 1	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
AXJ26023.1|1845435_1845900_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
AXJ26024.1|1845912_1847094_-	Riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
AXJ26025.1|1847104_1847737_-	Riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	1.4e-111
AXJ26026.1|1847743_1848787_-	Riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	9.1e-196
AXJ26027.1|1849267_1850770_-	hypothetical protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	8.6e-30
AXJ26028.1|1851290_1851605_+	Transcriptional repressor SdpR	NA	A0A2H4PQT4	Staphylococcus_phage	97.1	2.8e-52
AXJ26029.1|1851604_1852897_+	Arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	97.4	3.4e-224
AXJ26030.1|1852914_1853310_+	Arsenate-mycothiol transferase ArsC2	NA	A0A2H4PQT9	Staphylococcus_phage	99.2	2.4e-72
AXJ26031.1|1853713_1855033_-	Transposase	NA	NA	NA	NA	NA
AXJ26032.1|1855179_1856034_-	Bifunctional autolysin precursor	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
AXJ26033.1|1856309_1856534_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ26034.1|1856732_1857203_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	96.8	4.8e-80
AXJ26035.1|1857315_1857759_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ26036.1|1857745_1858189_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
AXJ26037.1|1858486_1859122_+|protease	CAAX amino terminal protease self- immunity	protease	NA	NA	NA	NA
AXJ26038.1|1859558_1860272_-	Transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
AXJ26039.1|1860529_1860832_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ26040.1|1861009_1861453_+	Putative fluoride ion transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	98.3	7.6e-59
AXJ26041.1|1861449_1861803_+	Putative fluoride ion transporter CrcB	NA	A0A2H4PQQ7	Staphylococcus_phage	77.8	4.2e-20
AXJ26042.1|1862052_1862886_-	Glyoxal reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.6	1.2e-158
AXJ26043.1|1863097_1864006_-	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
AXJ26044.1|1864130_1865324_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
AXJ26045.1|1865695_1867288_+	Phosphoenolpyruvate carboxykinase [ATP]	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
AXJ26046.1|1867582_1868353_-	Prolyl oligopeptidase family protein	NA	A0A2H4PQM6	Staphylococcus_phage	97.6	1.4e-140
AXJ26047.1|1868333_1868813_-	Putative 8-oxo-dGTP diphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.3e-84
AXJ26048.1|1868872_1869130_+	Putative membrane protein insertion efficiency factor	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AXJ26049.1|1869126_1870128_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	8.2e-186
AXJ26050.1|1870132_1871611_-	2-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	96.7	6.9e-282
AXJ26051.1|1871769_1872252_-	hypothetical protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	1.1e-79
AXJ26052.1|1872563_1873178_+	SPBc2 prophage-derived endonuclease YokF precursor	NA	A0A2H4PQM8	Staphylococcus_phage	65.2	3.4e-25
AXJ26053.1|1873259_1874255_+	Telomeric repeat-binding factor 2	NA	A0A2H4PQN2	Staphylococcus_phage	96.8	2.9e-74
AXJ26054.1|1874329_1874956_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	92.4	2.8e-75
AXJ26055.1|1874996_1875338_+	hypothetical protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	3.0e-55
AXJ26056.1|1875438_1876011_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	7.1e-25
AXJ26057.1|1876208_1876766_-	hypothetical protein	NA	A0A2H4PQN8	Staphylococcus_phage	96.2	2.0e-77
AXJ26058.1|1877393_1877837_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ26059.1|1878156_1878606_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ26060.1|1879241_1880432_-	EcoKI restriction-modification system protein HsdS	NA	A0A2H4PQP5	Staphylococcus_phage	34.7	1.5e-45
AXJ26061.1|1880424_1881981_-	Type I restriction enzyme EcoKI M protein	NA	A0A2H4PQP4	Staphylococcus_phage	99.2	1.2e-287
AXJ26062.1|1882344_1883064_-|protease	Serine protease SplF precursor	protease	A0A2H4PQP1	Staphylococcus_phage	95.8	4.0e-126
AXJ26063.1|1883189_1883909_-|protease	Serine protease SplC precursor	protease	A0A2H4PQP7	Staphylococcus_phage	92.9	2.4e-123
AXJ26064.1|1883966_1884689_-|protease	Serine protease SplB precursor	protease	A0A2H4PQN0	Staphylococcus_phage	95.8	8.1e-127
AXJ26065.1|1884813_1885143_-|protease	Serine protease SplA precursor	protease	A0A2H4PQN3	Staphylococcus_phage	95.4	6.4e-55
AXJ26066.1|1886475_1887054_+	hypothetical protein	NA	A0A2H4PQH6	Staphylococcus_phage	74.0	1.5e-67
AXJ26067.1|1887527_1887746_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	83.3	4.1e-26
AXJ26068.1|1887999_1888473_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ26069.1|1888477_1889269_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ26070.1|1889637_1890621_-	Leucotoxin LukDv precursor	NA	A0A2H4PQH7	Staphylococcus_phage	98.8	3.4e-184
AXJ26071.1|1890622_1891558_-	Leucotoxin LukEv precursor	NA	A0A2H4PQI5	Staphylococcus_phage	99.7	5.1e-174
>prophage 9
CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	2040822	2085428	2814270	tail,holin,terminase,capsid,protease,portal,head	Staphylococcus_phage(86.15%)	66	NA	NA
AXJ26206.1|2040822_2041023_+	Phospholipase C precursor	NA	A0A1P8L6A7	Staphylococcus_phage	100.0	3.4e-27
AXJ26207.1|2042196_2042547_-	Complement inhibitor precursor	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
AXJ26208.1|2043056_2043353_-	Bacterial SH3 domain protein	NA	A0A1P8L6B4	Staphylococcus_phage	94.9	1.1e-48
AXJ26209.1|2044042_2044534_-	Staphylokinase precursor	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
AXJ26210.1|2044724_2045480_-	putative cell wall hydrolase LytN precursor	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
AXJ26211.1|2045491_2045746_-|holin	Bacteriophage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
AXJ26212.1|2046276_2046651_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
AXJ26213.1|2046706_2046994_-	hypothetical protein	NA	A0A075LZJ6	Staphylococcus_phage	100.0	5.8e-44
AXJ26214.1|2047040_2047193_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	98.0	1.2e-19
AXJ26215.1|2047182_2050968_-	hypothetical protein	NA	D2JLF9	Staphylococcus_phage	99.4	0.0e+00
AXJ26216.1|2050983_2052474_-|tail	Phage tail protein	tail	D2JLF8	Staphylococcus_phage	99.8	1.8e-298
AXJ26217.1|2052473_2057123_-	Murein DD-endopeptidase MepM	NA	A0A1V0E5H1	Staphylococcus_phage	98.2	0.0e+00
AXJ26218.1|2057360_2057807_-	hypothetical protein	NA	O80053	Staphylococcus_phage	96.6	1.9e-73
AXJ26219.1|2057871_2058825_-	Bacterial Ig-like domain (group 2)	NA	A7TWD0	Staphylococcus_phage	100.0	6.2e-175
AXJ26220.1|2058825_2059206_-	hypothetical protein	NA	D2JLF3	Staphylococcus_phage	100.0	5.8e-68
AXJ26221.1|2059202_2059580_-	hypothetical protein	NA	D2JLF2	Staphylococcus_phage	100.0	1.1e-61
AXJ26222.1|2059579_2059915_-|head,tail	Phage head-tail joining protein	head,tail	A7TWC7	Staphylococcus_phage	100.0	1.1e-59
AXJ26223.1|2059901_2060234_-|head,tail	Phage gp6-like head-tail connector protein	head,tail	D2JLF0	Staphylococcus_phage	100.0	2.1e-58
AXJ26224.1|2060242_2060401_-	hypothetical protein	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
AXJ26225.1|2060436_2061684_-|capsid	Phage capsid family protein	capsid	A7TWC4	Staphylococcus_phage	100.0	5.0e-209
AXJ26226.1|2061771_2062356_-|head,protease	Caudovirus prohead protease	head,protease	D2JLE7	Staphylococcus_phage	100.0	9.8e-107
AXJ26227.1|2062348_2063599_-|portal	Phage portal protein	portal	D2JLE6	Staphylococcus_phage	99.8	1.3e-236
AXJ26228.1|2063604_2063844_-	hypothetical protein	NA	A7TWC1	Staphylococcus_phage	100.0	7.0e-35
AXJ26229.1|2063818_2065513_-	Phage Terminase	NA	D2JLE4	Staphylococcus_phage	100.0	0.0e+00
AXJ26230.1|2065515_2065983_-|terminase	Phage terminase, small subunit	terminase	D2JLE3	Staphylococcus_phage	100.0	1.1e-81
AXJ26231.1|2066112_2066466_-	HNH endonuclease	NA	D2JLE2	Staphylococcus_phage	100.0	1.3e-66
AXJ26232.1|2066472_2066925_-	hypothetical protein	NA	D2JLE1	Staphylococcus_phage	99.3	5.1e-79
AXJ26233.1|2067039_2067519_-	hypothetical protein	NA	D2JLE0	Staphylococcus_phage	100.0	3.8e-72
AXJ26234.1|2067541_2067742_-	hypothetical protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
AXJ26235.1|2067882_2068083_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ26236.1|2068079_2068286_-	hypothetical protein	NA	A0A0H3U2R7	Staphylococcus_phage	76.5	1.4e-20
AXJ26237.1|2068322_2068859_-	dUTPase	NA	R4IG63	Staphylococcus_phage	100.0	9.4e-96
AXJ26238.1|2068851_2069100_-	hypothetical protein	NA	A0A2K9VBU0	Staphylococcus_phage	97.6	1.3e-36
AXJ26239.1|2069092_2069368_-	hypothetical protein	NA	Q4ZCN9	Staphylococcus_virus	96.7	8.0e-43
AXJ26240.1|2069367_2069778_-	hypothetical protein	NA	Q4ZCP0	Staphylococcus_virus	100.0	8.0e-71
AXJ26241.1|2069788_2070037_-	hypothetical protein	NA	A0A2I6PDI0	Staphylococcus_phage	100.0	3.2e-43
AXJ26242.1|2070037_2070400_-	PVL ORF-50-like family protein	NA	B7T0B4	Staphylococcus_virus	80.0	2.0e-49
AXJ26243.1|2070400_2070586_-	hypothetical protein	NA	Q4ZA46	Staphylococcus_virus	96.7	4.6e-26
AXJ26244.1|2070590_2070995_-	hypothetical protein	NA	Q9G020	Staphylococcus_virus	97.0	2.6e-66
AXJ26245.1|2071004_2071226_-	hypothetical protein	NA	A7TWN4	Staphylococcus_phage	100.0	1.3e-35
AXJ26246.1|2071238_2071397_-	hypothetical protein	NA	A0A0H3U301	Staphylococcus_phage	100.0	3.4e-22
AXJ26247.1|2071393_2072179_-	DNA replication protein DnaC	NA	A0A0H4J332	Staphylococcus_phage	100.0	1.9e-145
AXJ26248.1|2072191_2072434_-	hypothetical protein	NA	A0A0H4IP66	Staphylococcus_phage	100.0	3.1e-38
AXJ26249.1|2072565_2073003_-	hypothetical protein	NA	A0A059T619	Staphylococcus_phage	100.0	1.4e-70
AXJ26250.1|2072974_2073667_-	hypothetical protein	NA	A0A0H4ISQ1	Staphylococcus_phage	100.0	8.0e-132
AXJ26251.1|2073679_2074231_-	hypothetical protein	NA	A0A0H4IPV5	Staphylococcus_phage	100.0	3.4e-101
AXJ26252.1|2074260_2075034_-	hypothetical protein	NA	A0EWP9	Staphylococcus_virus	99.6	3.1e-140
AXJ26253.1|2075033_2075513_-	Siphovirus Gp157	NA	A0A0H4J328	Staphylococcus_phage	100.0	1.1e-82
AXJ26254.1|2075527_2075788_-	hypothetical protein	NA	A1KX65	Staphylococcus_virus	100.0	8.9e-44
AXJ26255.1|2075792_2076095_-	hypothetical protein	NA	A0A0F6N3N3	Staphylococcus_phage	99.0	7.0e-48
AXJ26256.1|2076187_2076349_-	hypothetical protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
AXJ26257.1|2076345_2076666_-	hypothetical protein	NA	Q4ZDR7	Staphylococcus_virus	100.0	1.5e-56
AXJ26258.1|2076724_2076952_+	hypothetical protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
AXJ26259.1|2076953_2077145_-	hypothetical protein	NA	A7TWL8	Staphylococcus_phage	100.0	2.8e-26
AXJ26260.1|2077194_2077551_+	hypothetical protein	NA	A0A1P8L6H1	Staphylococcus_phage	99.2	2.3e-58
AXJ26261.1|2077545_2077740_-	hypothetical protein	NA	A0A1P8L6G6	Staphylococcus_phage	100.0	4.3e-19
AXJ26262.1|2077756_2078527_-	Phage antirepressor protein KilAC domain protein	NA	Q4ZCB0	Staphylococcus_virus	90.6	3.5e-128
AXJ26263.1|2078542_2078797_-	antitoxin HipB	NA	C5I625	Staphylococcus_phage	97.6	6.9e-41
AXJ26264.1|2078986_2079625_+	LexA repressor	NA	A0A0E3TAG1	Staphylococcus_phage	99.5	5.7e-116
AXJ26265.1|2079820_2080003_+	hypothetical protein	NA	A0A2I6PDF8	Staphylococcus_phage	98.3	9.1e-27
AXJ26266.1|2080059_2080185_+	hypothetical protein	NA	A0A2I6PF02	Staphylococcus_phage	100.0	5.1e-13
AXJ26267.1|2080181_2080796_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
AXJ26268.1|2080903_2081941_+	Tyrosine recombinase XerC	NA	A7TWL3	Staphylococcus_phage	99.7	1.7e-178
AXJ26269.1|2081997_2082822_+	Phospholipase C precursor	NA	A0A1P8L6H7	Staphylococcus_phage	99.6	2.6e-161
AXJ26270.1|2083334_2084351_-	putative leukocidin-like protein 1 precursor	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	1.1e-25
AXJ26271.1|2084372_2085428_-	putative leukocidin-like protein 2 precursor	NA	A0A1X9IGW5	Staphylococcus_phage	34.6	1.9e-36
