assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003354885.1_ASM335488v1	CP022910	Staphylococcus aureus strain 164 chromosome, complete genome	1	374173-374273	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL,RT	NA|129aa|up_6|CP022910.1_366779_367166_-,NA|86aa|up_4|CP022910.1_368116_368374_-,NA|221aa|down_1|CP022910.1_375363_376026_-,NA|179aa|down_7|CP022910.1_382117_382654_-	NA|88aa|up_9|CP022910.1_364892_365156_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|84aa|up_8|CP022910.1_365455_365707_+	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|194aa|up_7|CP022910.1_366132_366714_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|129aa|up_6|CP022910.1_366779_367166_-	NA	NA|209aa|up_5|CP022910.1_367417_368044_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|86aa|up_4|CP022910.1_368116_368374_-	NA	NA|508aa|up_3|CP022910.1_368488_370012_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_2|CP022910.1_370027_370597_-	TIGR03137, AhpC, peroxiredoxin	NA|269aa|up_1|CP022910.1_371037_371844_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|463aa|up_0|CP022910.1_371924_373313_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|319aa|down_0|CP022910.1_374289_375246_-	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|221aa|down_1|CP022910.1_375363_376026_-	NA	NA|136aa|down_2|CP022910.1_376168_376576_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|CP022910.1_377088_377667_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|CP022910.1_377666_378935_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|CP022910.1_378972_380439_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|CP022910.1_380463_382005_+	PRK00074, guaA, GMP synthase; Reviewed	NA|179aa|down_7|CP022910.1_382117_382654_-	NA	NA|235aa|down_8|CP022910.1_383046_383751_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|91aa|down_9|CP022910.1_384149_384422_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCA_003354885.1_ASM335488v1	CP022910	Staphylococcus aureus strain 164 chromosome, complete genome	2	618357-618449	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CTAAAGGTGAAGAGGAACGCAGTTGGATGCTA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL,RT	NA|36aa|up_3|CP022910.1_614840_614948_+,NA|169aa|down_4|CP022910.1_622196_622703_+,NA|239aa|down_5|CP022910.1_622864_623581_+	NA|313aa|up_9|CP022910.1_609054_609993_+	cd19083, AKR_AKR11A1_11D1, AKR11A and  AKR11D families of aldo-keto reductase (AKR)	NA|179aa|up_8|CP022910.1_610203_610740_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|159aa|up_7|CP022910.1_610908_611385_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|432aa|up_6|CP022910.1_611424_612720_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|169aa|up_5|CP022910.1_612762_613269_+	pfam08741, YwhD, YwhD family	NA|337aa|up_4|CP022910.1_613755_614766_+	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional	NA|36aa|up_3|CP022910.1_614840_614948_+	NA	NA|139aa|up_2|CP022910.1_615040_615457_+	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown]	NA|554aa|up_1|CP022910.1_615453_617115_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|212aa|up_0|CP022910.1_617503_618139_+	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|296aa|down_0|CP022910.1_618517_619405_+	cd01143, YvrC, Periplasmic binding protein YvrC	NA|329aa|down_1|CP022910.1_619516_620503_+	pfam01032, FecCD, FecCD transport family	NA|240aa|down_2|CP022910.1_620557_621277_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|267aa|down_3|CP022910.1_621260_622061_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|169aa|down_4|CP022910.1_622196_622703_+	NA	NA|239aa|down_5|CP022910.1_622864_623581_+	NA	NA|263aa|down_6|CP022910.1_623749_624538_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|125aa|down_7|CP022910.1_624788_625163_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|310aa|down_8|CP022910.1_626110_627040_-	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown]	NA|75aa|down_9|CP022910.1_627234_627459_-	pfam11148, DUF2922, Protein of unknown function (DUF2922)
GCA_003354885.1_ASM335488v1	CP022910	Staphylococcus aureus strain 164 chromosome, complete genome	3	781200-781285	3	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,WYL	Unclear	CCAACTTGCACATTATTGTAAGCTGACTTT	30	1	6	781230-781255|781230-781255|781230-781255|781230-781255|781230-781255|781230-781255	CP022910.1_744137-744112|CP022910.1_2764570-2764595|CP022910.1_2764626-2764651|CP022910.1_744193-744168|CP022910.1_889318-889293|CP022910.1_889374-889349	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,WYL,RT	NA,NA	NA|280aa|up_9|CP022910.1_768397_769237_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_8|CP022910.1_769410_770061_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_7|CP022910.1_770057_770294_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_6|CP022910.1_770562_772548_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_5|CP022910.1_772555_775402_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|up_4|CP022910.1_776118_777051_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|up_3|CP022910.1_777056_777896_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|up_2|CP022910.1_777903_778389_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|up_1|CP022910.1_778396_779836_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|up_0|CP022910.1_779902_780838_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_0|CP022910.1_781717_782629_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_1|CP022910.1_782625_783621_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_2|CP022910.1_783730_784675_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_3|CP022910.1_785248_785836_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|290aa|down_4|CP022910.1_786078_786948_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|210aa|down_5|CP022910.1_787683_788313_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|338aa|down_6|CP022910.1_789072_790086_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|337aa|down_7|CP022910.1_790138_791149_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|397aa|down_8|CP022910.1_791287_792478_+	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|254aa|down_9|CP022910.1_792599_793361_+	PRK00042, tpiA, triosephosphate isomerase; Provisional
GCA_003354885.1_ASM335488v1	CP022910	Staphylococcus aureus strain 164 chromosome, complete genome	4	824530-824611	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	2	824554-824587|824554-824587	CP022910.1_1315438-1315405|CP022910.1_1404592-1404625	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL,RT	NA|38aa|up_1|CP022910.1_823432_823546_+,NA|144aa|down_8|CP022910.1_831646_832078_-	NA|206aa|up_9|CP022910.1_818287_818905_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_8|CP022910.1_819059_819554_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_7|CP022910.1_819952_820375_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_6|CP022910.1_820522_821239_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_5|CP022910.1_821321_821861_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_4|CP022910.1_822010_822331_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_3|CP022910.1_822474_822831_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_2|CP022910.1_822988_823369_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|38aa|up_1|CP022910.1_823432_823546_+	NA	NA|293aa|up_0|CP022910.1_823547_824426_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|130aa|down_0|CP022910.1_825164_825554_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|CP022910.1_825546_825843_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|CP022910.1_826092_827118_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|CP022910.1_827110_827806_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_4|CP022910.1_827823_828645_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|407aa|down_5|CP022910.1_828787_830008_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|243aa|down_6|CP022910.1_830096_830825_-	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain	NA|243aa|down_7|CP022910.1_830848_831577_-	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain	NA|144aa|down_8|CP022910.1_831646_832078_-	NA	NA|153aa|down_9|CP022910.1_832094_832553_-	pfam06114, Peptidase_M78, IrrE N-terminal-like domain
GCA_003354885.1_ASM335488v1	CP022910	Staphylococcus aureus strain 164 chromosome, complete genome	5	1022931-1023018	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCCCTAACAACTAAAAGTTGTAAGG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL,RT	NA,NA|45aa|down_0|CP022910.1_1023027_1023162_-,NA|432aa|down_1|CP022910.1_1023313_1024609_+	NA|224aa|up_9|CP022910.1_1010721_1011393_+	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|730aa|up_8|CP022910.1_1011385_1013575_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|495aa|up_7|CP022910.1_1013553_1015038_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|343aa|up_6|CP022910.1_1015030_1016059_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|189aa|up_5|CP022910.1_1016061_1016628_+	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]	NA|493aa|up_4|CP022910.1_1016642_1018121_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|416aa|up_3|CP022910.1_1018142_1019390_+	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional	NA|269aa|up_2|CP022910.1_1019654_1020461_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|467aa|up_1|CP022910.1_1020453_1021854_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|192aa|up_0|CP022910.1_1021868_1022444_-	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]	NA|45aa|down_0|CP022910.1_1023027_1023162_-	NA	NA|432aa|down_1|CP022910.1_1023313_1024609_+	NA	NA|391aa|down_2|CP022910.1_1025033_1026206_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|181aa|down_3|CP022910.1_1026259_1026802_+	pfam05128, DUF697, Domain of unknown function (DUF697)	NA|89aa|down_4|CP022910.1_1026955_1027222_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|573aa|down_5|CP022910.1_1027224_1028943_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|78aa|down_6|CP022910.1_1029179_1029413_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|454aa|down_7|CP022910.1_1029610_1030972_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|340aa|down_8|CP022910.1_1030968_1031988_+	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]	NA|221aa|down_9|CP022910.1_1032120_1032783_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
GCA_003354885.1_ASM335488v1	CP022910	Staphylococcus aureus strain 164 chromosome, complete genome	6	1807785-1807995	1	CRT	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGANNN	41	3	27	1807823-1807843|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807882-1807901|1807940-1807957	CP022910.1_1807764-1807784|CP022910.1_114777-114796|CP022910.1_257974-257993|CP022910.1_335692-335711|CP022910.1_775749-775730|CP022910.1_775804-775785|CP022910.1_775859-775840|CP022910.1_781408-781389|CP022910.1_781466-781447|CP022910.1_824627-824608|CP022910.1_908961-908942|CP022910.1_1032933-1032914|CP022910.1_1315306-1315325|CP022910.1_1404724-1404705|CP022910.1_1629186-1629167|CP022910.1_1807709-1807728|CP022910.1_1965768-1965749|CP022910.1_2515150-2515169|CP022910.1_2764689-2764670|CP022910.1_258029-258048|CP022910.1_788675-788656|CP022910.1_1107207-1107226|CP022910.1_1364651-1364632|CP022910.1_1663149-1663130|CP022910.1_1975176-1975157|CP022910.1_748712-748731|CP022910.1_1807767-1807784	NA	3	3	Orphan	cas3,DEDDh,DinG,csa3,WYL,RT	NA,NA	NA|199aa|up_9|CP022910.1_1798304_1798901_-	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|286aa|up_8|CP022910.1_1798929_1799787_-	PRK13668, PRK13668, hypothetical protein; Provisional	NA|104aa|up_7|CP022910.1_1799886_1800198_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|359aa|up_6|CP022910.1_1800262_1801339_-	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|105aa|up_5|CP022910.1_1801422_1801737_+	COG5584, COG5584, Predicted small secreted protein [Function unknown]	NA|281aa|up_4|CP022910.1_1801861_1802704_-	cd07728, YtnP-like_MBL-fold, Bacillus subtilis YtnP and related proteins; MBL-fold metallo hydrolase domain	NA|215aa|up_3|CP022910.1_1803173_1803818_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|264aa|up_2|CP022910.1_1803832_1804624_-	COG0510, ycfN, Thiamine kinase and related kinases [Coenzyme transport and metabolism]	NA|283aa|up_1|CP022910.1_1805173_1806022_-	TIGR01121, D-alanine_aminotransferase, D-amino acid aminotransferase	NA|470aa|up_0|CP022910.1_1806025_1807435_-	PRK07318, PRK07318, dipeptidase PepV; Reviewed	NA|141aa|down_0|CP022910.1_1808298_1808721_-	pfam12732, YtxH, YtxH-like protein	NA|232aa|down_1|CP022910.1_1808737_1809433_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|554aa|down_2|CP022910.1_1809429_1811091_-	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|423aa|down_3|CP022910.1_1811497_1812766_+	pfam03486, HI0933_like, HI0933-like protein	NA|2187aa|down_4|CP022910.1_1812882_1819443_-	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain	NA|104aa|down_5|CP022910.1_1819768_1820080_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|806aa|down_6|CP022910.1_1820101_1822519_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|394aa|down_7|CP022910.1_1822806_1823988_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|318aa|down_8|CP022910.1_1824097_1825051_+	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only]	NA|188aa|down_9|CP022910.1_1825047_1825611_+	pfam06962, rRNA_methylase, Putative rRNA methylase
GCA_003354885.1_ASM335488v1	CP022910	Staphylococcus aureus strain 164 chromosome, complete genome	7	2199391-2199541	6	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,WYL	Type I-A	AACTTTAGTTGTTAGGGGCTCTTATGCA	28	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,DinG,csa3,WYL,RT	NA|77aa|up_5|CP022910.1_2194262_2194493_-,NA|364aa|up_0|CP022910.1_2198281_2199373_+,NA	NA|237aa|up_9|CP022910.1_2189872_2190583_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|CP022910.1_2190703_2191147_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|CP022910.1_2191346_2191760_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|CP022910.1_2192217_2193591_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|CP022910.1_2194262_2194493_-	NA	NA|313aa|up_4|CP022910.1_2194523_2195462_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|CP022910.1_2195896_2196562_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|CP022910.1_2196713_2197034_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|CP022910.1_2197035_2198016_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|CP022910.1_2198281_2199373_+	NA	NA|68aa|down_0|CP022910.1_2200401_2200605_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|379aa|down_1|CP022910.1_2200663_2201800_-	pfam02037, SAP, SAP domain	NA|286aa|down_2|CP022910.1_2202885_2203743_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_3|CP022910.1_2203810_2204593_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_4|CP022910.1_2204824_2206630_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_5|CP022910.1_2207310_2208849_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_6|CP022910.1_2208883_2211016_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_7|CP022910.1_2211027_2211462_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_8|CP022910.1_2211461_2212568_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|2479aa|down_9|CP022910.1_2212886_2220323_-	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain
GCA_003354885.1_ASM335488v1	CP022910	Staphylococcus aureus strain 164 chromosome, complete genome	8	2323547-2323740	2	CRT	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TGTTGGGGCCCCGCCAACTTGCA	23	3	13	2323570-2323602|2323570-2323602|2323570-2323602|2323570-2323602|2323570-2323602|2323626-2323661|2323626-2323661|2323626-2323661|2323626-2323661|2323685-2323717|2323685-2323717|2323685-2323717|2323685-2323717	CP022910.1_781266-781298|CP022910.1_1107291-1107259|CP022910.1_1315392-1315360|CP022910.1_1404638-1404670|CP022910.1_2599063-2599095|CP022910.1_1107238-1107203|CP022910.1_1807740-1807705|CP022910.1_1629155-1629190|CP022910.1_1975145-1975180|CP022910.1_781266-781298|CP022910.1_1107291-1107259|CP022910.1_1315392-1315360|CP022910.1_2599063-2599095	NA	3	3	Orphan	cas3,DEDDh,DinG,csa3,WYL,RT	NA|55aa|up_8|CP022910.1_2314080_2314245_+,NA|106aa|up_7|CP022910.1_2314489_2314807_+,NA|84aa|up_4|CP022910.1_2319925_2320177_+,NA	NA|303aa|up_9|CP022910.1_2313039_2313948_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|55aa|up_8|CP022910.1_2314080_2314245_+	NA	NA|106aa|up_7|CP022910.1_2314489_2314807_+	NA	NA|1054aa|up_6|CP022910.1_2314993_2318155_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_5|CP022910.1_2318271_2319537_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_4|CP022910.1_2319925_2320177_+	NA	NA|255aa|up_3|CP022910.1_2320168_2320933_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_2|CP022910.1_2321094_2321535_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_1|CP022910.1_2321527_2322739_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_0|CP022910.1_2322840_2323191_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|341aa|down_0|CP022910.1_2323881_2324904_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|CP022910.1_2324923_2325523_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|CP022910.1_2325529_2325763_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|CP022910.1_2325768_2326215_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|CP022910.1_2326228_2326714_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|CP022910.1_2326710_2327970_-	cd00887, MoeA, MoeA family	NA|169aa|down_6|CP022910.1_2328528_2329035_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_7|CP022910.1_2329065_2330070_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_8|CP022910.1_2330239_2330845_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|224aa|down_9|CP022910.1_2330845_2331517_-	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism]
