The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP022902	Staphylococcus aureus strain 165 chromosome, complete genome	2892907	52470	58311	2892907		Streptococcus_phage(75.0%)	8	NA	NA
AXJ57550.1|52470_53145_+	Integrase core domain protein	NA	A0A0N9SKD3	Staphylococcus_phage	100.0	6.2e-129
AXJ57551.1|53186_53549_-	bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor	NA	A0A1B0RXM1	Streptococcus_phage	100.0	1.2e-57
AXJ57552.1|53824_54619_-	Aminoglycoside 3'-phosphotransferase	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
AXJ57553.1|54711_55254_-	TDP-fucosamine acetyltransferase	NA	A0A1B0RXL7	Streptococcus_phage	99.4	2.0e-93
AXJ57554.1|55250_56159_-	Aminoglycoside 6-adenylyltransferase	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
AXJ57555.1|56191_56926_-	putative methyltransferase YcgJ	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
AXJ57556.1|56906_57590_-	hypothetical protein	NA	A0A1X9I6C9	Streptococcus_phage	99.1	4.1e-128
AXJ57557.1|57636_58311_-	Integrase core domain protein	NA	A0A0N9RU54	Staphylococcus_phage	99.1	2.0e-127
>prophage 2
CP022902	Staphylococcus aureus strain 165 chromosome, complete genome	2892907	753417	761237	2892907		Hokovirus(16.67%)	10	NA	NA
AXJ58172.1|753417_754473_-	Histidine protein kinase SaeS	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
AXJ58173.1|754472_755159_-	Response regulator SaeR	NA	NA	NA	NA	NA
AXJ58174.1|755133_755607_-	DoxX	NA	NA	NA	NA	NA
AXJ58175.1|755948_756389_-	Electron transfer DM13	NA	NA	NA	NA	NA
AXJ58176.1|756668_757253_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58177.1|757351_758065_-	7-carboxy-7-deazaguanine synthase	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
AXJ58178.1|758068_758488_-	6-carboxy-5,6,7,8-tetrahydropterin synthase	NA	S4U060	uncultured_phage	28.7	6.3e-07
AXJ58179.1|758489_759158_-	7-cyano-7-deazaguanine synthase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
AXJ58180.1|759508_760102_+	Anthranilate synthase component 2	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
AXJ58181.1|760085_761237_+	Aminodeoxychorismate synthase component 1	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 3
CP022902	Staphylococcus aureus strain 165 chromosome, complete genome	2892907	773209	787940	2892907		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
AXJ58190.1|773209_774268_+	Histidinol-phosphate aminotransferase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
AXJ58191.1|774618_775161_+	Putative 5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AXJ58192.1|775784_776702_-	Putative lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
AXJ58193.1|776971_778477_-	Di-/tripeptide transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AXJ58194.1|778817_779318_-	NADPH-dependent 7-cyano-7-deazaguanine reductase	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
AXJ58195.1|779337_780204_-	EamA-like transporter family protein	NA	NA	NA	NA	NA
AXJ58196.1|781004_781403_+	ribonucleotide reductase stimulatory protein	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
AXJ58197.1|781365_783471_+	Ribonucleoside-diphosphate reductase subunit alpha 2	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AXJ58198.1|783588_784560_+	Ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AXJ58199.1|785225_786239_+	Fe(3+) dicitrate transport system permease protein FecD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.0	2.2e-138
AXJ58200.1|786225_787182_+	Iron-uptake system permease protein FeuC	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AXJ58201.1|787178_787940_+	putative siderophore transport system ATP-binding protein YusV	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 4
CP022902	Staphylococcus aureus strain 165 chromosome, complete genome	2892907	867870	889079	2892907	transposase	Staphylococcus_phage(77.78%)	33	NA	NA
AXJ58279.1|867870_868896_+	Methionine import ATP-binding protein MetN 2	NA	G9BWD6	Planktothrix_phage	36.8	1.2e-27
AXJ58280.1|868888_869584_+	Methionine import system permease protein MetP	NA	NA	NA	NA	NA
AXJ58281.1|869601_870423_+	Methionine-binding lipoprotein MetQ precursor	NA	NA	NA	NA	NA
AXJ58282.1|870565_871786_-|transposase	transposase	transposase	Q4ZE80	Staphylococcus_phage	47.5	6.4e-100
AXJ58283.1|871874_872603_-	Enterotoxin type A precursor	NA	A0EX09	Staphylococcus_phage	32.3	1.9e-22
AXJ58284.1|872906_873356_-	Enterotoxin type E precursor	NA	A0EX09	Staphylococcus_phage	32.8	7.3e-09
AXJ58285.1|873425_873857_-	hypothetical protein	NA	Q4ZCB6	Staphylococcus_virus	56.0	5.1e-36
AXJ58286.1|873873_874332_-	hypothetical protein	NA	A0A0H4J322	Staphylococcus_phage	83.0	5.1e-66
AXJ58287.1|874343_874676_-	helix-turn-helix protein	NA	A0A1J0MFC1	Staphylococcus_phage	74.5	1.6e-37
AXJ58288.1|874868_875108_+	helix-turn-helix protein	NA	A0A2H4J9X2	uncultured_Caudovirales_phage	88.6	1.7e-33
AXJ58289.1|875123_875396_+	hypothetical protein	NA	Q4ZE77	Staphylococcus_phage	90.0	9.7e-41
AXJ58290.1|875407_875554_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ58291.1|875546_875756_+	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
AXJ58292.1|875758_876079_+	hypothetical protein	NA	Q4ZE75	Staphylococcus_phage	51.9	1.3e-20
AXJ58293.1|876142_877012_+	hypothetical protein	NA	A0A1W6JQL5	Staphylococcus_phage	92.7	3.4e-156
AXJ58294.1|877028_878486_+	Virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	96.1	1.0e-277
AXJ58295.1|878786_879149_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	99.2	8.9e-66
AXJ58296.1|879150_879435_+	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	95.7	1.9e-47
AXJ58297.1|879431_880073_+	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	91.5	1.5e-108
AXJ58298.1|880589_880931_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
AXJ58299.1|880942_881521_+	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.4	1.4e-28
AXJ58300.1|881538_881757_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ58301.1|881807_882335_+	hypothetical protein	NA	A0A1W6JQH7	Staphylococcus_phage	97.1	3.5e-87
AXJ58302.1|882337_882679_+	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	98.2	1.4e-57
AXJ58303.1|882675_883245_+	Terminase small subunit	NA	Q4ZE85	Staphylococcus_phage	97.9	1.0e-100
AXJ58304.1|883552_884353_+	Enterotoxin type B precursor	NA	A0A097PAT7	Streptococcus_pyogenes_phage	49.4	1.0e-53
AXJ58305.1|884430_884988_-	hypothetical protein	NA	A0A1W6JQE5	Staphylococcus_phage	73.8	1.4e-70
AXJ58306.1|885384_885513_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	1.1e-15
AXJ58307.1|885583_885694_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	94.4	2.4e-11
AXJ58308.1|885695_885881_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
AXJ58309.1|886711_886906_+	CsbD-like protein	NA	NA	NA	NA	NA
AXJ58310.1|887138_887990_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58311.1|888317_889079_+	YurY	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 5
CP022902	Staphylococcus aureus strain 165 chromosome, complete genome	2892907	1505263	1593670	2892907	head,holin,tRNA,tail,portal,capsid,lysis,transposase,protease,terminase	Staphylococcus_phage(78.67%)	102	NA	NA
AXJ58847.1|1505263_1506556_-|tRNA	Asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
AXJ58848.1|1506877_1509571_-	hypothetical protein	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
AXJ58849.1|1509594_1510566_-	Bifunctional ligase/repressor BirA	NA	NA	NA	NA	NA
AXJ58850.1|1510552_1511755_-	CCA-adding enzyme	NA	H7BUW3	unidentified_phage	42.5	3.2e-35
AXJ58851.1|1511759_1512902_-	GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase	NA	NA	NA	NA	NA
AXJ58852.1|1513142_1513460_-	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
AXJ58853.1|1513796_1514495_-	Putative neutral zinc metallopeptidase	NA	NA	NA	NA	NA
AXJ58854.1|1514548_1515136_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58855.1|1515125_1515713_-	hypothetical protein	NA	G3MAV7	Bacillus_virus	27.2	2.8e-08
AXJ58856.1|1515714_1516959_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AXJ58857.1|1516965_1518264_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AXJ58858.1|1518273_1519338_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
AXJ58859.1|1519363_1520530_-	Chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	7.6e-34
AXJ58860.1|1520915_1521116_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58861.1|1521324_1521774_-	Nucleoside diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
AXJ58862.1|1521865_1522825_-	Heptaprenyl diphosphate synthase component 2	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
AXJ58863.1|1522826_1523552_-	Demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
AXJ58864.1|1523554_1524127_-	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1	NA	NA	NA	NA	NA
AXJ58865.1|1524557_1524830_-	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
AXJ58866.1|1525000_1525999_-	Glycerol-3-phosphate dehydrogenase [NAD(P)+]	NA	NA	NA	NA	NA
AXJ58867.1|1526015_1527326_-	GTPase Der	NA	NA	NA	NA	NA
AXJ58868.1|1527547_1528723_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
AXJ58869.1|1529434_1530094_-	Cytidylate kinase	NA	NA	NA	NA	NA
AXJ58870.1|1530170_1531139_+	putative L-asparaginase	NA	NA	NA	NA	NA
AXJ58871.1|1531253_1532240_-	Glucosaminate ammonia-lyase	NA	NA	NA	NA	NA
AXJ58872.1|1532641_1534102_-	Elastin-binding protein EbpS	NA	NA	NA	NA	NA
AXJ58873.1|1534254_1535634_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
AXJ58874.1|1535623_1536577_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58875.1|1536684_1536933_+	Ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
AXJ58876.1|1537038_1537584_-	Riboflavin transporter RibU	NA	NA	NA	NA	NA
AXJ58877.1|1538180_1539095_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58878.1|1539109_1539316_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58879.1|1539308_1540187_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58880.1|1540304_1541222_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58881.1|1541312_1541660_-	hypothetical protein	NA	Q4ZCJ7	Staphylococcus_virus	100.0	3.0e-26
AXJ58882.1|1541710_1542394_-	hypothetical protein	NA	A0A0A7S0U2	Clostridium_phage	28.3	1.1e-13
AXJ58883.1|1542390_1542714_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58884.1|1542670_1543720_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58885.1|1544338_1545793_-	putative cell wall hydrolase LytN precursor	NA	I1W626	Staphylococcus_phage	99.0	4.1e-287
AXJ58886.1|1545803_1546106_-|holin,lysis	Phage lysis protein, holin	holin,lysis	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
AXJ58887.1|1546241_1546541_-	hypothetical protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AXJ58888.1|1546586_1546751_-	hypothetical protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AXJ58889.1|1546743_1547133_-	hypothetical protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
AXJ58890.1|1547132_1548599_-	hypothetical protein	NA	A0A2I6PDE3	Staphylococcus_phage	94.3	2.0e-257
AXJ58891.1|1548598_1550509_-	hypothetical protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
AXJ58892.1|1550524_1550815_-	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
AXJ58893.1|1550814_1552398_-|tail	Prophage endopeptidase tail	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
AXJ58894.1|1552406_1553231_-|tail	Phage tail protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
AXJ58895.1|1553230_1559431_-	Glycyl-glycine endopeptidase ALE-1 precursor	NA	U5U762	Staphylococcus_phage	99.8	0.0e+00
AXJ58896.1|1559444_1559603_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AXJ58897.1|1559644_1559995_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
AXJ58898.1|1560052_1560508_-	Bacterial Ig-like domain (group 2)	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
AXJ58899.1|1560599_1561241_-|tail	Phage major tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
AXJ58900.1|1561275_1561671_-	hypothetical protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
AXJ58901.1|1561671_1562073_-	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
AXJ58902.1|1562069_1562402_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
AXJ58903.1|1562413_1562692_-|head,tail	Phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
AXJ58904.1|1562760_1563924_-|capsid	Phage capsid family protein	capsid	A0A2I6PDD7	Staphylococcus_phage	100.0	9.4e-218
AXJ58905.1|1563935_1564709_-|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	M1TAZ4	Staphylococcus_phage	99.6	2.7e-136
AXJ58906.1|1564692_1565931_-|portal	Phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	100.0	6.9e-235
AXJ58907.1|1565935_1567627_-	Phage Terminase	NA	A0A2I6PE44	Staphylococcus_phage	99.6	0.0e+00
AXJ58908.1|1567616_1567922_-|terminase	Phage terminase, small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
AXJ58909.1|1568050_1568365_-	HNH endonuclease	NA	Q4ZCU3	Staphylococcus_virus	100.0	2.5e-56
AXJ58910.1|1568521_1568959_-	hypothetical protein	NA	A0A2I6PEB8	Staphylococcus_phage	100.0	1.0e-76
AXJ58911.1|1568971_1570330_-	hypothetical protein	NA	A0A0K1LKG3	Staphylococcus_phage	98.7	1.2e-259
AXJ58912.1|1570319_1570610_-	VRR-NUC domain protein	NA	U5U7A3	Staphylococcus_phage	100.0	4.9e-51
AXJ58913.1|1570950_1573398_-	Virulence-associated protein E	NA	B5WZN5	Staphylococcus_phage	99.9	0.0e+00
AXJ58914.1|1573450_1573651_-	hypothetical protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
AXJ58915.1|1573718_1573874_-	Transcriptional activator RinB	NA	B5WZN3	Staphylococcus_phage	100.0	1.2e-19
AXJ58916.1|1573863_1574100_-	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	100.0	1.9e-37
AXJ58917.1|1574124_1574361_-	hypothetical protein	NA	C8CH06	Staphylococcus_phage	98.7	3.1e-35
AXJ58918.1|1574397_1574934_-	dUTPase	NA	S4V978	Staphylococcus_phage	98.9	1.0e-94
AXJ58919.1|1574926_1575109_-	hypothetical protein	NA	D2JGL7	Staphylococcus_phage	100.0	2.6e-26
AXJ58920.1|1575098_1575353_-	hypothetical protein	NA	W5R8J0	Staphylococcus_phage	100.0	5.0e-39
AXJ58921.1|1575364_1575607_-	hypothetical protein	NA	A0A2D1G5G2	Staphylococcus_phage	98.8	5.6e-40
AXJ58922.1|1575621_1575822_-	hypothetical protein	NA	A0A2I6PEM3	Staphylococcus_phage	100.0	2.5e-30
AXJ58923.1|1575824_1576082_-	hypothetical protein	NA	A0A2I6PEN5	Staphylococcus_phage	100.0	2.6e-43
AXJ58924.1|1576081_1576483_-	PVL ORF-50-like family protein	NA	A0A2I6PEL5	Staphylococcus_phage	99.2	2.3e-67
AXJ58925.1|1576482_1576668_-	hypothetical protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
AXJ58926.1|1576680_1578642_-	DNA polymerase I, thermostable	NA	A0A2I6PE86	Staphylococcus_phage	100.0	0.0e+00
AXJ58927.1|1578700_1579258_-	hypothetical protein	NA	A0A2K9VBT2	Staphylococcus_phage	100.0	1.8e-97
AXJ58928.1|1579283_1580450_-	PD-(D/E)XK nuclease superfamily protein	NA	A0A0K1LKE3	Staphylococcus_phage	99.7	1.6e-220
AXJ58929.1|1580446_1580809_-	hypothetical protein	NA	A0A2I6PF03	Staphylococcus_phage	99.2	2.4e-55
AXJ58930.1|1580823_1581147_-	hypothetical protein	NA	A0A2I6PF12	Staphylococcus_phage	100.0	5.9e-53
AXJ58931.1|1581225_1581387_-	hypothetical protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
AXJ58932.1|1581399_1581663_-	hypothetical protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
AXJ58933.1|1581687_1581903_-	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	97.2	2.7e-30
AXJ58934.1|1581957_1582323_+	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
AXJ58935.1|1582291_1582537_-	hypothetical protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
AXJ58936.1|1582586_1582805_-	hypothetical protein	NA	B5WZL5	Staphylococcus_phage	100.0	7.8e-33
AXJ58937.1|1582820_1583597_-	hypothetical protein	NA	M1RZB2	Staphylococcus_phage	100.0	1.5e-142
AXJ58938.1|1583622_1583850_-	hypothetical protein	NA	B5WZL3	Staphylococcus_phage	100.0	3.3e-34
AXJ58939.1|1584021_1584636_+	LexA repressor	NA	B5WZL2	Staphylococcus_phage	100.0	9.0e-111
AXJ58940.1|1584651_1585572_+	DNA polymerase III PolC-type	NA	B5WZL1	Staphylococcus_phage	100.0	2.5e-173
AXJ58941.1|1585668_1585851_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
AXJ58942.1|1585908_1586034_+	hypothetical protein	NA	Q4ZCR4	Staphylococcus_virus	97.6	1.6e-11
AXJ58943.1|1586030_1586645_-	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	99.5	2.5e-105
AXJ58944.1|1586770_1587976_+|transposase	transposase	transposase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
AXJ58945.1|1588018_1590046_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	97.2	2.0e-114
AXJ58946.1|1590038_1590968_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ58947.1|1591212_1592964_-	Sensor protein SrrB	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
AXJ58948.1|1592944_1593670_-	Transcriptional regulatory protein SrrA	NA	W8CYM9	Bacillus_phage	43.0	4.6e-45
>prophage 6
CP022902	Staphylococcus aureus strain 165 chromosome, complete genome	2892907	1650126	1658438	2892907	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
AXJ59011.1|1650126_1650912_-	High-affinity zinc uptake system ATP-binding protein ZnuC	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
AXJ59012.1|1651037_1651928_-	putative endonuclease 4	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
AXJ59013.1|1651937_1653284_-	DEAD-box ATP-dependent RNA helicase CshB	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
AXJ59014.1|1653397_1654498_-	Putative GTP cyclohydrolase 1 type 2	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
AXJ59015.1|1654500_1655178_-|tRNA	tRNA (adenine(22)-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
AXJ59016.1|1655308_1656415_-	RNA polymerase sigma factor SigA	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
AXJ59017.1|1656638_1658438_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 7
CP022902	Staphylococcus aureus strain 165 chromosome, complete genome	2892907	1727497	1736540	2892907	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AXJ59087.1|1727497_1728016_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
AXJ59088.1|1728037_1730311_-	Single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
AXJ59089.1|1730513_1732793_-	bifunctional preprotein translocase subunit SecD/SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AXJ59090.1|1733067_1733328_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AXJ59091.1|1733346_1734486_-|tRNA	Queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AXJ59092.1|1734508_1735534_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AXJ59093.1|1735535_1736540_-	Holliday junction ATP-dependent DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
CP022902	Staphylococcus aureus strain 165 chromosome, complete genome	2892907	1862211	1944787	2892907	tRNA,protease	Staphylococcus_phage(93.55%)	71	NA	NA
AXJ59196.1|1862211_1868772_-	Extracellular matrix-binding protein ebh precursor	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	2.0e-304
AXJ59197.1|1869097_1869409_-	molybdopterin biosynthesis-like protein MoeZ	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
AXJ59198.1|1869430_1871848_-|tRNA	Leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.1	0.0e+00
AXJ59199.1|1872135_1873317_-	Multidrug resistance protein MdtH	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
AXJ59200.1|1873426_1874380_+	coproporphyrinogen III oxidase	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AXJ59201.1|1874376_1874940_+	16S rRNA m(4)C1402 methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
AXJ59202.1|1875059_1875461_-	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
AXJ59203.1|1877039_1877867_-	Phospholipase YtpA	NA	NA	NA	NA	NA
AXJ59204.1|1878100_1879102_+	Proline dehydrogenase 1	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
AXJ59205.1|1879223_1879688_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
AXJ59206.1|1879700_1880882_-	Riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
AXJ59207.1|1880892_1881525_-	Riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
AXJ59208.1|1881531_1882563_-	Riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	4.8e-197
AXJ59209.1|1883055_1884558_-	hypothetical protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
AXJ59210.1|1885080_1885395_+	Transcriptional repressor SdpR	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
AXJ59211.1|1885394_1886687_+	Arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
AXJ59212.1|1886704_1887100_+	Arsenate-mycothiol transferase ArsC2	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
AXJ59213.1|1887394_1888249_-	Bifunctional autolysin precursor	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
AXJ59214.1|1888524_1888749_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ59215.1|1888947_1889418_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
AXJ59216.1|1889530_1889974_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ59217.1|1889960_1890404_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
AXJ59218.1|1890699_1891335_+|protease	CAAX amino terminal protease self- immunity	protease	NA	NA	NA	NA
AXJ59219.1|1891774_1892488_-	Transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
AXJ59220.1|1892747_1893050_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ59221.1|1893305_1893671_+	Putative fluoride ion transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
AXJ59222.1|1893667_1894021_+	Putative fluoride ion transporter CrcB	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
AXJ59223.1|1896103_1896937_-	Glyoxal reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
AXJ59224.1|1897148_1898057_-	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
AXJ59225.1|1898181_1899375_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
AXJ59226.1|1899745_1901338_+	Phosphoenolpyruvate carboxykinase [ATP]	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
AXJ59227.1|1901473_1901959_-	Transposase IS200 like protein	NA	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
AXJ59228.1|1902270_1902993_-	Alpha/beta hydrolase family protein	NA	A0A2H4PQM6	Staphylococcus_phage	98.1	2.1e-122
AXJ59229.1|1902973_1903453_-	Putative 8-oxo-dGTP diphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	1.5e-84
AXJ59230.1|1903512_1903770_+	Putative membrane protein insertion efficiency factor	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AXJ59231.1|1903766_1904768_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
AXJ59232.1|1904772_1906251_-	2-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
AXJ59233.1|1906409_1906892_-	hypothetical protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	2.5e-79
AXJ59234.1|1907203_1907620_+	hypothetical protein	NA	A0A2H4PQM8	Staphylococcus_phage	90.4	5.2e-09
AXJ59235.1|1907898_1908894_+	Telomeric repeat-binding factor 2	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
AXJ59236.1|1908969_1909596_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
AXJ59237.1|1909636_1909981_+	hypothetical protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
AXJ59238.1|1910078_1910630_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
AXJ59239.1|1910847_1911489_-	hypothetical protein	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
AXJ59240.1|1911789_1911966_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ59241.1|1911976_1912360_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ59242.1|1912963_1913107_-	Transposase	NA	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
AXJ59243.1|1913976_1914354_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ59244.1|1914874_1915435_-	hypothetical protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	9.5e-75
AXJ59245.1|1915751_1916924_-	Transposase, Mutator family	NA	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
AXJ59246.1|1921042_1922242_-	EcoKI restriction-modification system protein HsdS	NA	A0A2H4PQP5	Staphylococcus_phage	99.7	5.5e-229
AXJ59247.1|1922234_1923791_-	Type I restriction enzyme EcoKI M protein	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	2.3e-288
AXJ59248.1|1924153_1924873_-|protease	Serine protease SplF precursor	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
AXJ59249.1|1925023_1925740_-|protease	Serine protease SplE precursor	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
AXJ59250.1|1925897_1926617_-|protease	Serine protease SplD precursor	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
AXJ59251.1|1926737_1927457_-|protease	Serine protease SplC precursor	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
AXJ59252.1|1927514_1928237_-|protease	Serine protease SplB precursor	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
AXJ59253.1|1928361_1929078_-|protease	Serine protease SplA precursor	protease	A0A2H4PQN3	Staphylococcus_phage	96.2	2.0e-125
AXJ59254.1|1930041_1930608_+	hypothetical protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
AXJ59255.1|1931081_1931780_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
AXJ59256.1|1931776_1932538_-	ABC-2 family transporter protein	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
AXJ59257.1|1932534_1933227_-	putative ABC transporter ATP-binding protein YxlF	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
AXJ59258.1|1933249_1934623_-	Thermophilic serine proteinase precursor	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
AXJ59259.1|1934632_1935151_-	Epidermin decarboxylase	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
AXJ59260.1|1935166_1936411_-	Nisin biosynthesis protein NisC	NA	A0A2H4PQH9	Staphylococcus_phage	99.8	2.6e-237
AXJ59261.1|1936403_1939397_-	hypothetical protein	NA	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
AXJ59262.1|1939461_1939605_-	Lantibiotic gallidermin precursor	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
AXJ59263.1|1940726_1941710_-	Leucotoxin LukDv precursor	NA	A0A2H4PQH7	Staphylococcus_phage	98.8	6.8e-185
AXJ59264.1|1941711_1942647_-	Leucotoxin LukEv precursor	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
AXJ59265.1|1943530_1943986_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	1.7e-61
AXJ59266.1|1943998_1944787_+	hypothetical protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
>prophage 9
CP022902	Staphylococcus aureus strain 165 chromosome, complete genome	2892907	1973310	2052388	2892907	head,holin,tRNA,tail,portal,capsid,lysis,protease,terminase	Staphylococcus_phage(86.76%)	89	NA	NA
AXJ59291.1|1973310_1973781_-|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
AXJ59292.1|1973785_1974913_-	Epoxyqueuosine reductase	NA	NA	NA	NA	NA
AXJ59293.1|1975063_1975792_-	L-cystine import ATP-binding protein TcyC	NA	G9BWD6	Planktothrix_phage	42.7	1.0e-36
AXJ59294.1|1975778_1977236_-	Arginine transport system permease protein ArtQ	NA	NA	NA	NA	NA
AXJ59295.1|1977493_1978555_-	Phosphotransferase system, EIIC	NA	NA	NA	NA	NA
AXJ59296.1|1979047_1980367_+	Transposase	NA	A0A1S5SBP9	Streptococcus_phage	33.5	1.7e-50
AXJ59297.1|1988821_1989268_-	Peroxide-responsive repressor PerR	NA	NA	NA	NA	NA
AXJ59298.1|1989364_1990324_-	Glyoxylate/hydroxypyruvate reductase B	NA	NA	NA	NA	NA
AXJ59299.1|1990320_1990776_-	Putative peroxiredoxin bcp	NA	NA	NA	NA	NA
AXJ59300.1|1990856_1992146_+	Glutamate-1-semialdehyde 2,1-aminomutase 2	NA	NA	NA	NA	NA
AXJ59301.1|1992387_1993533_+	Fusaric acid resistance protein family protein	NA	NA	NA	NA	NA
AXJ59302.1|1993723_1995460_-	Putative multidrug export ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
AXJ59303.1|1995750_1996293_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ59304.1|1996594_1997632_-	putative A/G-specific adenine glycosylase YfhQ	NA	NA	NA	NA	NA
AXJ59305.1|1997783_1998761_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ59306.1|1999021_1999858_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ59307.1|1999866_2001384_-	Teichoic acids export ATP-binding protein TagH	NA	NA	NA	NA	NA
AXJ59308.1|2001398_2001713_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ59309.1|2001690_2002509_-	Regulatory protein RecX	NA	NA	NA	NA	NA
AXJ59310.1|2002769_2003579_-	Monofunctional glycosyltransferase	NA	NA	NA	NA	NA
AXJ59311.1|2003919_2004435_-|protease	Putative cysteine protease YraA	protease	NA	NA	NA	NA
AXJ59312.1|2004565_2004727_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ59313.1|2005199_2005883_-	hypothetical protein	NA	A0A0A7S0U2	Clostridium_phage	28.3	1.1e-13
AXJ59314.1|2005879_2006203_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ59315.1|2006159_2007209_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ59316.1|2007827_2009282_-	putative cell wall hydrolase LytN precursor	NA	I1W626	Staphylococcus_phage	99.0	4.1e-287
AXJ59317.1|2009292_2009595_-|holin,lysis	Phage lysis protein, holin	holin,lysis	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
AXJ59318.1|2009730_2010030_-	hypothetical protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AXJ59319.1|2010075_2010240_-	hypothetical protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AXJ59320.1|2010232_2010622_-	hypothetical protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
AXJ59321.1|2010621_2012088_-	hypothetical protein	NA	A0A2I6PDE3	Staphylococcus_phage	94.3	2.0e-257
AXJ59322.1|2012087_2013998_-	hypothetical protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
AXJ59323.1|2014013_2014304_-	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
AXJ59324.1|2014303_2015887_-|tail	Prophage endopeptidase tail	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
AXJ59325.1|2015895_2016720_-|tail	Phage tail protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
AXJ59326.1|2016719_2022920_-	Glycyl-glycine endopeptidase ALE-1 precursor	NA	U5U762	Staphylococcus_phage	99.8	0.0e+00
AXJ59327.1|2022933_2023092_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AXJ59328.1|2023133_2023484_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
AXJ59329.1|2023541_2023997_-	Bacterial Ig-like domain (group 2)	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
AXJ59330.1|2024088_2024730_-|tail	Phage major tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
AXJ59331.1|2024764_2025160_-	hypothetical protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
AXJ59332.1|2025160_2025562_-	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
AXJ59333.1|2025558_2025891_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
AXJ59334.1|2025902_2026181_-|head,tail	Phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
AXJ59335.1|2026249_2027413_-|capsid	Phage capsid family protein	capsid	A0A2I6PDD7	Staphylococcus_phage	100.0	9.4e-218
AXJ59336.1|2027424_2028198_-|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	M1TAZ4	Staphylococcus_phage	99.6	2.7e-136
AXJ59337.1|2028181_2029420_-|portal	Phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	100.0	6.9e-235
AXJ59338.1|2029424_2031116_-	Phage Terminase	NA	A0A2I6PE44	Staphylococcus_phage	99.6	0.0e+00
AXJ59339.1|2031105_2031411_-|terminase	Phage terminase, small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
AXJ59340.1|2031539_2031854_-	HNH endonuclease	NA	Q4ZCU3	Staphylococcus_virus	100.0	2.5e-56
AXJ59341.1|2032010_2032448_-	hypothetical protein	NA	A0A2I6PEB8	Staphylococcus_phage	100.0	1.0e-76
AXJ59342.1|2032460_2033819_-	hypothetical protein	NA	A0A0K1LKG3	Staphylococcus_phage	98.9	1.4e-260
AXJ59343.1|2033808_2034099_-	VRR-NUC domain protein	NA	U5U7A3	Staphylococcus_phage	100.0	4.9e-51
AXJ59344.1|2034439_2036887_-	Virulence-associated protein E	NA	B5WZN5	Staphylococcus_phage	99.9	0.0e+00
AXJ59345.1|2036939_2037140_-	hypothetical protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
AXJ59346.1|2037207_2037363_-	Transcriptional activator RinB	NA	B5WZN3	Staphylococcus_phage	100.0	1.2e-19
AXJ59347.1|2037352_2037589_-	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	100.0	1.9e-37
AXJ59348.1|2037613_2037850_-	hypothetical protein	NA	C8CH06	Staphylococcus_phage	98.7	3.1e-35
AXJ59349.1|2037886_2038423_-	dUTPase	NA	S4V978	Staphylococcus_phage	98.9	1.0e-94
AXJ59350.1|2038415_2038598_-	hypothetical protein	NA	D2JGL7	Staphylococcus_phage	100.0	2.6e-26
AXJ59351.1|2038587_2038842_-	hypothetical protein	NA	W5R8J0	Staphylococcus_phage	100.0	5.0e-39
AXJ59352.1|2038853_2039102_-	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	97.6	3.0e-41
AXJ59353.1|2039101_2039356_-	hypothetical protein	NA	A0A2I6PDN8	Staphylococcus_phage	96.4	1.8e-41
AXJ59354.1|2039355_2039715_-	PVL ORF-50-like family protein	NA	D2JGL0	Staphylococcus_phage	100.0	4.5e-62
AXJ59355.1|2039715_2039901_-	hypothetical protein	NA	D2JGK9	Staphylococcus_phage	100.0	7.0e-27
AXJ59356.1|2039900_2040308_-	Endodeoxyribonuclease RusA	NA	D2JGK8	Staphylococcus_phage	100.0	1.7e-73
AXJ59357.1|2040317_2040539_-	hypothetical protein	NA	Q4ZBL4	Staphylococcus_phage	100.0	1.7e-35
AXJ59358.1|2040551_2040710_-	hypothetical protein	NA	A0A0H3U301	Staphylococcus_phage	98.1	4.5e-22
AXJ59359.1|2040706_2041492_-	DNA replication protein DnaC	NA	A0A0H4J332	Staphylococcus_phage	99.6	4.2e-145
AXJ59360.1|2041504_2042236_-	hypothetical protein	NA	A0A1J0MGB2	Staphylococcus_phage	79.3	1.2e-80
AXJ59361.1|2042300_2042582_+	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
AXJ59362.1|2042574_2042724_-	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
AXJ59363.1|2042720_2043395_-	hypothetical protein	NA	A1KX69	Staphylococcus_virus	99.6	1.5e-130
AXJ59364.1|2043406_2043850_-	Single-stranded DNA-binding protein ssb	NA	A0A2I6PD99	Staphylococcus_phage	95.9	3.2e-73
AXJ59365.1|2043846_2044497_-	ERF superfamily protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
AXJ59366.1|2044497_2045034_-	Bacteriophage Mu Gam like protein	NA	A0A2I6PD93	Staphylococcus_phage	100.0	1.7e-81
AXJ59367.1|2045046_2045307_-	hypothetical protein	NA	A0A059T5A3	Staphylococcus_phage	100.0	1.2e-43
AXJ59368.1|2045552_2045774_-	hypothetical protein	NA	A0A1X9H0Q4	Staphylococcus_phage	98.6	3.3e-31
AXJ59369.1|2045844_2046498_+	hypothetical protein	NA	Q4ZBF5	Staphylococcus_virus	99.5	1.3e-115
AXJ59370.1|2046507_2046651_-	hypothetical protein	NA	A0A0H4ITW0	Staphylococcus_phage	97.9	5.6e-16
AXJ59371.1|2046666_2047419_-	Phage antirepressor protein KilAC domain protein	NA	A0A0E3T9K5	Staphylococcus_phage	99.2	4.8e-138
AXJ59372.1|2047420_2047606_-	helix-turn-helix protein	NA	A0A0H4IP57	Staphylococcus_phage	100.0	1.3e-25
AXJ59373.1|2048051_2048534_+	hypothetical protein	NA	A0A0N9BAX2	Staphylococcus_phage	100.0	1.1e-82
AXJ59374.1|2048634_2048814_-	hypothetical protein	NA	A0A0H3U490	Staphylococcus_phage	98.3	2.2e-25
AXJ59375.1|2048828_2049272_-	hypothetical protein	NA	Q6R853	Staphylococcus_virus	99.3	5.8e-75
AXJ59376.1|2049319_2049532_-	helix-turn-helix protein	NA	A7TWF1	Staphylococcus_phage	100.0	1.6e-30
AXJ59377.1|2049683_2050415_+	LexA repressor	NA	S4SVC5	Staphylococcus_phage	100.0	6.9e-134
AXJ59378.1|2050450_2051131_+	PemK-like protein	NA	A0A2H4PQQ5	Staphylococcus_phage	100.0	5.1e-123
AXJ59379.1|2051341_2052388_+	Tyrosine recombinase XerC	NA	Q4ZE08	Staphylococcus_virus	100.0	4.2e-201
>prophage 10
CP022902	Staphylococcus aureus strain 165 chromosome, complete genome	2892907	2807649	2825174	2892907	transposase	Streptococcus_phage(100.0%)	16	NA	NA
AXJ60067.1|2807649_2808867_-|transposase	transposase	transposase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
AXJ60068.1|2808948_2809152_-	Excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
AXJ60069.1|2809612_2809843_-	Helix-turn-helix domain protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
AXJ60070.1|2809839_2810262_-	RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
AXJ60071.1|2810766_2811120_+	anaerobic benzoate catabolism transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	99.1	3.0e-58
AXJ60072.1|2811465_2813385_-	Tetracycline resistance protein TetM from transposon TnFO1	NA	A0A1S5SF82	Streptococcus_phage	99.4	0.0e+00
AXJ60073.1|2813761_2814697_-	Conjugative transposon protein TcpC	NA	A0A1S5SF22	Streptococcus_phage	99.4	5.9e-170
AXJ60074.1|2814693_2815650_-	putative endopeptidase p60 precursor	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	2.8e-183
AXJ60075.1|2815603_2817868_-	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	94.3	0.0e+00
AXJ60076.1|2817870_2820318_-	AAA-like domain protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
AXJ60077.1|2820782_2821280_-	Antirestriction protein (ArdA)	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
AXJ60078.1|2821396_2821618_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
AXJ60079.1|2821660_2822866_-	Replication initiation factor	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
AXJ60080.1|2823043_2824429_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
AXJ60081.1|2824457_2824841_-	hypothetical protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	2.3e-64
AXJ60082.1|2824859_2825174_-	hypothetical protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
