The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP022717	Staphylococcus aureus strain 27 chromosome, complete genome	2814328	310292	353163	2814328	lysis,capsid,portal,tail,terminase,holin,head,protease	Staphylococcus_phage(88.06%)	67	NA	NA
AXJ22039.1|310292_311498_-	Tyrosine recombinase XerC	NA	A7YGM7	Staphylococcus_virus	98.8	1.0e-219
AXJ22040.1|311623_312238_+	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
AXJ22041.1|312234_312360_-	hypothetical protein	NA	A0A2I6PF02	Staphylococcus_phage	100.0	5.1e-13
AXJ22042.1|312417_312600_-	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
AXJ22043.1|312670_313402_-	LexA repressor	NA	S4SVC5	Staphylococcus_phage	99.2	1.3e-132
AXJ22044.1|313553_313766_+	helix-turn-helix protein	NA	A7TWF1	Staphylococcus_phage	100.0	1.6e-30
AXJ22045.1|313813_314257_+	hypothetical protein	NA	A7TWF2	Staphylococcus_phage	100.0	8.9e-76
AXJ22046.1|314271_314421_+	hypothetical protein	NA	D2JGJ0	Staphylococcus_phage	100.0	1.4e-20
AXJ22047.1|314461_314674_-	hypothetical protein	NA	D2JGJ1	Staphylococcus_phage	100.0	7.6e-33
AXJ22048.1|314743_314941_+	hypothetical protein	NA	A7TWF5	Staphylococcus_phage	100.0	4.6e-24
AXJ22049.1|314927_315308_-	hypothetical protein	NA	Q4ZCQ5	Staphylococcus_virus	100.0	5.8e-68
AXJ22050.1|315374_315620_+	hypothetical protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
AXJ22051.1|315588_315954_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
AXJ22052.1|316008_316224_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
AXJ22053.1|316248_316512_+	hypothetical protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
AXJ22054.1|316524_316686_+	hypothetical protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
AXJ22055.1|316764_317088_+	hypothetical protein	NA	A0A2I6PDL5	Staphylococcus_phage	100.0	1.3e-52
AXJ22056.1|317102_317465_+	hypothetical protein	NA	Q4ZCP8	Staphylococcus_virus	99.2	1.4e-55
AXJ22057.1|317461_318628_+	PD-(D/E)XK nuclease superfamily protein	NA	A0A2I6PDL4	Staphylococcus_phage	100.0	8.3e-222
AXJ22058.1|318653_319211_+	hypothetical protein	NA	A0A2K9VBT2	Staphylococcus_phage	99.5	2.0e-96
AXJ22059.1|319270_321232_+	DNA polymerase I, thermostable	NA	A0A2K9VBT3	Staphylococcus_phage	98.6	0.0e+00
AXJ22060.1|321244_321430_+	hypothetical protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
AXJ22061.1|321429_321831_+	PVL ORF-50-like family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
AXJ22062.1|321830_322085_+	hypothetical protein	NA	Q6R831	Staphylococcus_virus	97.6	8.2e-42
AXJ22063.1|322090_322333_+	hypothetical protein	NA	A0A2I6PF06	Staphylococcus_phage	100.0	5.0e-41
AXJ22064.1|322347_322512_+	hypothetical protein	NA	A0A2I6PF20	Staphylococcus_phage	100.0	7.6e-25
AXJ22065.1|322504_322657_+	hypothetical protein	NA	Q9G015	Staphylococcus_virus	100.0	3.3e-22
AXJ22066.1|322653_322938_+	hypothetical protein	NA	Q9G014	Staphylococcus_virus	98.9	8.0e-46
AXJ22067.1|322930_323185_+	hypothetical protein	NA	A7TWH5	Staphylococcus_phage	91.7	1.4e-36
AXJ22068.1|323171_323342_+	hypothetical protein	NA	A0A1W6JQ22	Staphylococcus_phage	98.2	9.7e-23
AXJ22069.1|323334_323862_+	Deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	A0A2I6PE85	Staphylococcus_phage	99.4	3.0e-94
AXJ22070.1|323898_324105_+	hypothetical protein	NA	A0A0H3U2R7	Staphylococcus_phage	77.9	8.4e-21
AXJ22071.1|324101_324296_+	hypothetical protein	NA	S4SX95	Staphylococcus_phage	95.3	1.9e-27
AXJ22072.1|324292_324496_+	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
AXJ22073.1|324488_324725_+	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
AXJ22074.1|324714_325104_+	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	100.0	3.6e-65
AXJ22075.1|325100_325253_+	Transcriptional activator RinB	NA	A7TWI2	Staphylococcus_phage	100.0	2.6e-19
AXJ22076.1|325320_325521_+	hypothetical protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
AXJ22077.1|325572_328020_+	Virulence-associated protein E	NA	R4WAL1	Staphylococcus_phage	100.0	0.0e+00
AXJ22078.1|328360_328651_+	VRR-NUC domain protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
AXJ22079.1|328640_328922_+	hypothetical protein	NA	A0A1X9IH01	Staphylococcus_phage	100.0	1.0e-45
AXJ22080.1|329005_329995_+	hypothetical protein	NA	A0A2I6PER4	Staphylococcus_phage	100.0	5.2e-185
AXJ22081.1|330007_330445_+	hypothetical protein	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
AXJ22082.1|330601_330916_+	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
AXJ22083.1|331044_331350_+|terminase	Phage terminase, small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
AXJ22084.1|331339_333031_+	Phage Terminase	NA	A0A2I6PE44	Staphylococcus_phage	100.0	0.0e+00
AXJ22085.1|333035_334274_+|portal	Phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	99.8	2.6e-234
AXJ22086.1|334257_335031_+|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
AXJ22087.1|335042_336206_+|capsid	Phage capsid family protein	capsid	A0A2I6PE62	Staphylococcus_phage	99.7	6.1e-217
AXJ22088.1|336274_336553_+|head,tail	Phage gp6-like head-tail connector protein	head,tail	A0A2I6PE36	Staphylococcus_phage	100.0	2.1e-46
AXJ22089.1|336564_336897_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
AXJ22090.1|336893_337295_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
AXJ22091.1|337295_337691_+	hypothetical protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
AXJ22092.1|337725_338367_+|tail	Phage major tail protein	tail	A0A2I6PE59	Staphylococcus_phage	99.5	2.2e-120
AXJ22093.1|338458_338914_+	Bacterial Ig-like domain (group 2)	NA	Q9B0D4	Staphylococcus_phage	100.0	2.8e-77
AXJ22094.1|338971_339322_+	hypothetical protein	NA	A0A2I6PDE6	Staphylococcus_phage	100.0	1.1e-55
AXJ22095.1|339363_339522_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AXJ22096.1|339535_345736_+	Glycyl-glycine endopeptidase ALE-1 precursor	NA	A0A2I6PF36	Staphylococcus_phage	98.8	0.0e+00
AXJ22097.1|345735_346560_+|tail	Phage tail protein	tail	A0A2I6PER3	Staphylococcus_phage	99.6	3.5e-158
AXJ22098.1|346568_348152_+|tail	Prophage endopeptidase tail	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
AXJ22099.1|348151_348442_+	hypothetical protein	NA	A0A2I6PF46	Staphylococcus_phage	100.0	2.1e-49
AXJ22100.1|348457_350368_+	hypothetical protein	NA	U5U4Q1	Staphylococcus_phage	99.8	0.0e+00
AXJ22101.1|350367_351834_+	hypothetical protein	NA	A7TWK6	Staphylococcus_phage	100.0	7.6e-257
AXJ22102.1|351833_352223_+	hypothetical protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
AXJ22103.1|352215_352380_+	hypothetical protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AXJ22104.1|352425_352725_+	hypothetical protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AXJ22105.1|352860_353163_+|holin,lysis	Phage lysis protein, holin	holin,lysis	B7T0L0	Staphylococcus_virus	100.0	4.1e-48
>prophage 2
CP022717	Staphylococcus aureus strain 27 chromosome, complete genome	2814328	745697	753517	2814328		Hokovirus(16.67%)	10	NA	NA
AXJ22452.1|745697_746753_-	Histidine protein kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
AXJ22453.1|746752_747439_-	Response regulator SaeR	NA	NA	NA	NA	NA
AXJ22454.1|747413_747887_-	DoxX	NA	NA	NA	NA	NA
AXJ22455.1|748228_748669_-	Electron transfer DM13	NA	NA	NA	NA	NA
AXJ22456.1|748948_749533_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ22457.1|749631_750345_-	7-carboxy-7-deazaguanine synthase	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
AXJ22458.1|750348_750768_-	6-carboxy-5,6,7,8-tetrahydropterin synthase	NA	S4U060	uncultured_phage	28.7	6.3e-07
AXJ22459.1|750769_751438_-	7-cyano-7-deazaguanine synthase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.1	9.6e-66
AXJ22460.1|751788_752382_+	Anthranilate synthase component 2	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	1.5e-38
AXJ22461.1|752365_753517_+	Aminodeoxychorismate synthase component 1	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
>prophage 3
CP022717	Staphylococcus aureus strain 27 chromosome, complete genome	2814328	765489	779682	2814328		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
AXJ22470.1|765489_766548_+	Histidinol-phosphate aminotransferase	NA	A0A1X6WGT4	Pacmanvirus	26.4	2.3e-21
AXJ22471.1|766705_767248_+	Putative 5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AXJ22472.1|767853_768771_-	Putative lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.4	2.1e-07
AXJ22473.1|769052_770558_-	Di-/tripeptide transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AXJ22474.1|770897_771398_-	NADPH-dependent 7-cyano-7-deazaguanine reductase	NA	E7DN65	Pneumococcus_phage	70.8	2.2e-51
AXJ22475.1|771417_772284_-	EamA-like transporter family protein	NA	NA	NA	NA	NA
AXJ22476.1|773084_773483_+	ribonucleotide reductase stimulatory protein	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.7	4.3e-53
AXJ22477.1|773445_775551_+	Ribonucleoside-diphosphate reductase subunit alpha 2	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AXJ22478.1|775668_776640_+	Ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AXJ22479.1|776967_777978_+	Fe(3+) dicitrate transport system permease protein FecD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.2	4.2e-137
AXJ22480.1|777967_778924_+	Iron-uptake system permease protein FeuC	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AXJ22481.1|778920_779682_+	putative siderophore transport system ATP-binding protein YusV	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	5.0e-18
>prophage 4
CP022717	Staphylococcus aureus strain 27 chromosome, complete genome	2814328	1027969	1036442	2814328		Synechococcus_phage(33.33%)	9	NA	NA
AXJ22716.1|1027969_1028452_+	N5-carboxyaminoimidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	43.3	3.4e-20
AXJ22717.1|1028438_1029563_+	N5-carboxyaminoimidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AXJ22718.1|1029566_1030271_+	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	2.8e-47
AXJ22719.1|1030270_1030534_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AXJ22720.1|1030535_1031207_+	Phosphoribosylformylglycinamidine synthase 1	NA	NA	NA	NA	NA
AXJ22721.1|1031199_1033389_+	Phosphoribosylformylglycinamidine synthase 2	NA	A6N228	Microbacterium_phage	39.7	1.8e-140
AXJ22722.1|1033367_1034852_+	Amidophosphoribosyltransferase precursor	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
AXJ22723.1|1034844_1035873_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	3.8e-61
AXJ22724.1|1035875_1036442_+	Phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	8.0e-29
>prophage 5
CP022717	Staphylococcus aureus strain 27 chromosome, complete genome	2814328	1297916	1329360	2814328	portal,protease,capsid	Bacillus_phage(29.63%)	42	NA	NA
AXJ22961.1|1297916_1298876_-	Tyrosine recombinase XerC	NA	A0A0C5AN64	Paenibacillus_phage	31.5	1.5e-27
AXJ22962.1|1299095_1299791_-	Host cell surface-exposed lipoprotein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	34.5	3.4e-05
AXJ22963.1|1299802_1300186_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ22964.1|1300381_1301701_+	Transposase	NA	NA	NA	NA	NA
AXJ22965.1|1301857_1302250_-	transcriptional repressor DicA	NA	A0A2I6PE55	Staphylococcus_phage	53.6	2.7e-28
AXJ22966.1|1302417_1302636_+	hypothetical protein	NA	A0A2I6PE94	Staphylococcus_phage	62.5	4.9e-19
AXJ22967.1|1302662_1302938_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ22968.1|1302942_1303077_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ22969.1|1303107_1303206_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ22970.1|1303202_1303373_+	hypothetical protein	NA	Q4ZDZ8	Staphylococcus_virus	89.3	1.8e-21
AXJ22971.1|1303361_1303568_-	hypothetical protein	NA	A1BTY8	Staphylococcus_virus	75.0	4.3e-25
AXJ22972.1|1303627_1304311_+	hypothetical protein	NA	A9CR56	Staphylococcus_phage	86.0	8.0e-108
AXJ22973.1|1304409_1304571_+	hypothetical protein	NA	R4IH12	Staphylococcus_phage	69.8	1.1e-12
AXJ22974.1|1304658_1304976_+	hypothetical protein	NA	W5RAK4	Staphylococcus_phage	74.5	9.0e-30
AXJ22975.1|1304965_1305232_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	53.6	3.9e-18
AXJ22976.1|1305236_1306487_+	hypothetical protein	NA	A0A1B1P7L4	Bacillus_phage	57.8	1.8e-134
AXJ22977.1|1306483_1306795_+	hypothetical protein	NA	A0A2P0ZLA7	Lactobacillus_phage	43.2	7.0e-19
AXJ22978.1|1306787_1307093_+	VRR-NUC domain protein	NA	A0A1B1P7M6	Bacillus_phage	59.3	5.8e-26
AXJ22979.1|1307082_1308909_+	PD-(D/E)XK nuclease superfamily protein	NA	A0A1B1P7N0	Bacillus_phage	56.3	2.6e-166
AXJ22980.1|1308926_1309133_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ22981.1|1309178_1309661_+	hypothetical protein	NA	A0A2H4J1S8	uncultured_Caudovirales_phage	37.3	2.9e-19
AXJ22982.1|1309942_1311661_+	DNA polymerase II	NA	A0A1B1P7M5	Bacillus_phage	63.6	1.9e-211
AXJ22983.1|1311764_1312154_+	hypothetical protein	NA	U3PG42	Staphylococcus_phage	51.9	4.5e-07
AXJ22984.1|1312229_1312535_+	MazG nucleotide pyrophosphohydrolase domain protein	NA	A0A2H4JF73	uncultured_Caudovirales_phage	73.7	6.2e-36
AXJ22985.1|1312557_1313028_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ22986.1|1313448_1313640_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ22987.1|1313671_1315477_+	hypothetical protein	NA	A0A1B1P7L5	Bacillus_phage	58.8	1.6e-208
AXJ22988.1|1315850_1316342_+	positive control sigma-like factor	NA	S5MAA9	Brevibacillus_phage	30.0	7.4e-07
AXJ22989.1|1316774_1317065_+	HNH endonuclease	NA	D2XR61	Bacillus_phage	43.2	1.3e-19
AXJ22990.1|1317383_1317716_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ22991.1|1317699_1319343_+	Phage Terminase	NA	A0A0U4B089	Bacillus_phage	57.3	8.4e-180
AXJ22992.1|1319358_1320495_+|portal	Phage portal protein	portal	A0A2H4JBZ5	uncultured_Caudovirales_phage	41.4	7.8e-84
AXJ22993.1|1320494_1321181_+|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	A0A2H4J8Y7	uncultured_Caudovirales_phage	49.5	4.0e-43
AXJ22994.1|1321207_1322377_+|capsid	Phage capsid family protein	capsid	A0A0U4JIF4	Bacillus_phage	50.3	1.3e-97
AXJ22995.1|1322398_1322704_+	hypothetical protein	NA	A0A059T7R0	Listeria_phage	44.8	6.0e-15
AXJ22996.1|1322678_1323023_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ22997.1|1323006_1323345_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ22998.1|1323344_1323782_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ22999.1|1323787_1324471_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ23000.1|1324498_1324849_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ23001.1|1324896_1325121_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ23002.1|1325178_1329360_+	Chromosome partition protein Smc	NA	Q9T0X1	Lactobacillus_phage	42.6	3.2e-58
>prophage 6
CP022717	Staphylococcus aureus strain 27 chromosome, complete genome	2814328	1613848	1622160	2814328	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
AXJ23248.1|1613848_1614634_-	High-affinity zinc uptake system ATP-binding protein ZnuC	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
AXJ23249.1|1614759_1615650_-	putative endonuclease 4	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
AXJ23250.1|1615659_1617006_-	DEAD-box ATP-dependent RNA helicase CshB	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
AXJ23251.1|1617119_1618220_-	Putative GTP cyclohydrolase 1 type 2	NA	A0A1S5V250	Saudi_moumouvirus	30.6	2.3e-08
AXJ23252.1|1618222_1618900_-|tRNA	tRNA (adenine(22)-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
AXJ23253.1|1619030_1620137_-	RNA polymerase sigma factor SigA	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
AXJ23254.1|1620360_1622160_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	1.3e-53
>prophage 7
CP022717	Staphylococcus aureus strain 27 chromosome, complete genome	2814328	1691632	1700675	2814328	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AXJ23323.1|1691632_1692151_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
AXJ23324.1|1692172_1694446_-	Single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
AXJ23325.1|1694648_1696928_-	bifunctional preprotein translocase subunit SecD/SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AXJ23326.1|1697202_1697463_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AXJ23327.1|1697481_1698621_-|tRNA	Queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AXJ23328.1|1698643_1699669_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AXJ23329.1|1699670_1700675_-	Holliday junction ATP-dependent DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
CP022717	Staphylococcus aureus strain 27 chromosome, complete genome	2814328	1829509	1891616	2814328	protease,tRNA	Staphylococcus_phage(95.74%)	58	NA	NA
AXJ23436.1|1829509_1836049_-	Extracellular matrix-binding protein ebh precursor	NA	A0A2H4PQU6	Staphylococcus_phage	92.1	8.9e-289
AXJ23437.1|1836374_1836686_-	molybdopterin biosynthesis protein MoeB	NA	A0A2H4PQR9	Staphylococcus_phage	96.1	4.5e-50
AXJ23438.1|1836707_1839125_-|tRNA	Leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
AXJ23439.1|1839412_1840594_-	Multidrug resistance protein MdtH	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
AXJ23440.1|1840703_1841657_+	coproporphyrinogen III oxidase	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AXJ23441.1|1841653_1842217_+	16S rRNA m(4)C1402 methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
AXJ23442.1|1842336_1842738_-	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
AXJ23443.1|1843309_1844137_-	Phospholipase YtpA	NA	NA	NA	NA	NA
AXJ23444.1|1844370_1845372_+	Proline dehydrogenase 1	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
AXJ23445.1|1845493_1845958_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
AXJ23446.1|1845970_1847152_-	Riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
AXJ23447.1|1847162_1847795_-	Riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	1.4e-111
AXJ23448.1|1847801_1848845_-	Riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	9.1e-196
AXJ23449.1|1849325_1850828_-	hypothetical protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	8.6e-30
AXJ23450.1|1851348_1851663_+	Transcriptional repressor SdpR	NA	A0A2H4PQT4	Staphylococcus_phage	97.1	2.8e-52
AXJ23451.1|1851662_1852955_+	Arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	97.4	3.4e-224
AXJ23452.1|1852972_1853368_+	Arsenate-mycothiol transferase ArsC2	NA	A0A2H4PQT9	Staphylococcus_phage	99.2	2.4e-72
AXJ23453.1|1853771_1855091_-	Transposase	NA	NA	NA	NA	NA
AXJ23454.1|1855237_1856092_-	Bifunctional autolysin precursor	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
AXJ23455.1|1856367_1856592_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ23456.1|1856790_1857261_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	96.8	4.8e-80
AXJ23457.1|1857373_1857817_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ23458.1|1857803_1858247_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
AXJ23459.1|1858544_1859180_+|protease	CAAX amino terminal protease self- immunity	protease	NA	NA	NA	NA
AXJ23460.1|1859616_1860330_-	Transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
AXJ23461.1|1860587_1860890_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ23462.1|1861145_1861511_+	Putative fluoride ion transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	98.3	6.2e-59
AXJ23463.1|1861507_1861861_+	Putative fluoride ion transporter CrcB	NA	A0A2H4PQQ7	Staphylococcus_phage	77.8	4.2e-20
AXJ23464.1|1862110_1862944_-	Glyoxal reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.6	1.2e-158
AXJ23465.1|1863155_1864064_-	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
AXJ23466.1|1864188_1865382_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
AXJ23467.1|1865753_1867346_+	Phosphoenolpyruvate carboxykinase [ATP]	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
AXJ23468.1|1867640_1868411_-	Prolyl oligopeptidase family protein	NA	A0A2H4PQM6	Staphylococcus_phage	97.6	1.4e-140
AXJ23469.1|1868391_1868871_-	Putative 8-oxo-dGTP diphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.3e-84
AXJ23470.1|1868930_1869188_+	Putative membrane protein insertion efficiency factor	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AXJ23471.1|1869184_1870186_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	8.2e-186
AXJ23472.1|1870190_1871669_-	2-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	96.7	6.9e-282
AXJ23473.1|1871827_1872310_-	hypothetical protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	1.1e-79
AXJ23474.1|1872621_1873236_+	SPBc2 prophage-derived endonuclease YokF precursor	NA	A0A2H4PQM8	Staphylococcus_phage	65.2	3.4e-25
AXJ23475.1|1873317_1874313_+	Telomeric repeat-binding factor 2	NA	A0A2H4PQN2	Staphylococcus_phage	96.8	2.9e-74
AXJ23476.1|1874387_1875014_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	92.4	2.8e-75
AXJ23477.1|1875054_1875396_+	hypothetical protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	3.0e-55
AXJ23478.1|1875496_1876069_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	7.1e-25
AXJ23479.1|1876266_1876824_-	hypothetical protein	NA	A0A2H4PQN8	Staphylococcus_phage	96.2	2.0e-77
AXJ23480.1|1877451_1877895_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ23481.1|1878214_1878664_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ23482.1|1879299_1880490_-	EcoKI restriction-modification system protein HsdS	NA	A0A2H4PQP5	Staphylococcus_phage	34.7	1.5e-45
AXJ23483.1|1880482_1882039_-	Type I restriction enzyme EcoKI M protein	NA	A0A2H4PQP4	Staphylococcus_phage	99.2	1.2e-287
AXJ23484.1|1882402_1883122_-|protease	Serine protease SplF precursor	protease	A0A2H4PQP1	Staphylococcus_phage	95.8	4.0e-126
AXJ23485.1|1883247_1883967_-|protease	Serine protease SplC precursor	protease	A0A2H4PQP7	Staphylococcus_phage	92.9	2.4e-123
AXJ23486.1|1884024_1884747_-|protease	Serine protease SplB precursor	protease	A0A2H4PQN0	Staphylococcus_phage	95.8	8.1e-127
AXJ23487.1|1884871_1885201_-|protease	Serine protease SplA precursor	protease	A0A2H4PQN3	Staphylococcus_phage	95.4	6.4e-55
AXJ23488.1|1886533_1887112_+	hypothetical protein	NA	A0A2H4PQH6	Staphylococcus_phage	74.0	1.5e-67
AXJ23489.1|1887585_1887804_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	83.3	4.1e-26
AXJ23490.1|1888057_1888531_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ23491.1|1888535_1889327_+	hypothetical protein	NA	NA	NA	NA	NA
AXJ23492.1|1889695_1890679_-	Leucotoxin LukDv precursor	NA	A0A2H4PQH7	Staphylococcus_phage	98.8	3.4e-184
AXJ23493.1|1890680_1891616_-	Leucotoxin LukEv precursor	NA	A0A2H4PQI5	Staphylococcus_phage	99.7	5.1e-174
>prophage 9
CP022717	Staphylococcus aureus strain 27 chromosome, complete genome	2814328	2040880	2085486	2814328	capsid,portal,tail,holin,terminase,head,protease	Staphylococcus_phage(86.15%)	66	NA	NA
AXJ23628.1|2040880_2041081_+	Phospholipase C precursor	NA	A0A1P8L6A7	Staphylococcus_phage	100.0	3.4e-27
AXJ23629.1|2042254_2042605_-	Complement inhibitor precursor	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
AXJ23630.1|2043114_2043411_-	Bacterial SH3 domain protein	NA	A0A1P8L6B4	Staphylococcus_phage	94.9	1.1e-48
AXJ23631.1|2044100_2044592_-	Staphylokinase precursor	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
AXJ23632.1|2044782_2045538_-	putative cell wall hydrolase LytN precursor	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
AXJ23633.1|2045549_2045804_-|holin	Bacteriophage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
AXJ23634.1|2046334_2046709_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
AXJ23635.1|2046764_2047052_-	hypothetical protein	NA	A0A075LZJ6	Staphylococcus_phage	100.0	5.8e-44
AXJ23636.1|2047098_2047251_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	98.0	1.2e-19
AXJ23637.1|2047240_2051026_-	hypothetical protein	NA	D2JLF9	Staphylococcus_phage	99.4	0.0e+00
AXJ23638.1|2051041_2052532_-|tail	Phage tail protein	tail	D2JLF8	Staphylococcus_phage	99.8	1.8e-298
AXJ23639.1|2052531_2057181_-	Murein DD-endopeptidase MepM	NA	A0A1V0E5H1	Staphylococcus_phage	98.2	0.0e+00
AXJ23640.1|2057418_2057865_-	hypothetical protein	NA	O80053	Staphylococcus_phage	96.6	1.9e-73
AXJ23641.1|2057929_2058883_-	Bacterial Ig-like domain (group 2)	NA	A7TWD0	Staphylococcus_phage	100.0	6.2e-175
AXJ23642.1|2058883_2059264_-	hypothetical protein	NA	D2JLF3	Staphylococcus_phage	100.0	5.8e-68
AXJ23643.1|2059260_2059638_-	hypothetical protein	NA	D2JLF2	Staphylococcus_phage	100.0	1.1e-61
AXJ23644.1|2059637_2059973_-|head,tail	Phage head-tail joining protein	head,tail	A7TWC7	Staphylococcus_phage	100.0	1.1e-59
AXJ23645.1|2059959_2060292_-|head,tail	Phage gp6-like head-tail connector protein	head,tail	D2JLF0	Staphylococcus_phage	100.0	2.1e-58
AXJ23646.1|2060300_2060459_-	hypothetical protein	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
AXJ23647.1|2060494_2061742_-|capsid	Phage capsid family protein	capsid	A7TWC4	Staphylococcus_phage	100.0	5.0e-209
AXJ23648.1|2061829_2062414_-|head,protease	Caudovirus prohead protease	head,protease	D2JLE7	Staphylococcus_phage	100.0	9.8e-107
AXJ23649.1|2062406_2063657_-|portal	Phage portal protein	portal	D2JLE6	Staphylococcus_phage	99.8	1.3e-236
AXJ23650.1|2063662_2063902_-	hypothetical protein	NA	A7TWC1	Staphylococcus_phage	100.0	7.0e-35
AXJ23651.1|2063876_2065571_-	Phage Terminase	NA	D2JLE4	Staphylococcus_phage	100.0	0.0e+00
AXJ23652.1|2065573_2066041_-|terminase	Phage terminase, small subunit	terminase	D2JLE3	Staphylococcus_phage	100.0	1.1e-81
AXJ23653.1|2066170_2066524_-	HNH endonuclease	NA	D2JLE2	Staphylococcus_phage	100.0	1.3e-66
AXJ23654.1|2066530_2066983_-	hypothetical protein	NA	D2JLE1	Staphylococcus_phage	99.3	5.1e-79
AXJ23655.1|2067097_2067577_-	hypothetical protein	NA	D2JLE0	Staphylococcus_phage	100.0	3.8e-72
AXJ23656.1|2067599_2067800_-	hypothetical protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
AXJ23657.1|2067940_2068141_-	hypothetical protein	NA	NA	NA	NA	NA
AXJ23658.1|2068137_2068344_-	hypothetical protein	NA	A0A0H3U2R7	Staphylococcus_phage	76.5	1.4e-20
AXJ23659.1|2068380_2068917_-	dUTPase	NA	R4IG63	Staphylococcus_phage	100.0	9.4e-96
AXJ23660.1|2068909_2069158_-	hypothetical protein	NA	A0A2K9VBU0	Staphylococcus_phage	97.6	1.3e-36
AXJ23661.1|2069150_2069426_-	hypothetical protein	NA	Q4ZCN9	Staphylococcus_virus	96.7	8.0e-43
AXJ23662.1|2069425_2069836_-	hypothetical protein	NA	Q4ZCP0	Staphylococcus_virus	100.0	8.0e-71
AXJ23663.1|2069846_2070095_-	hypothetical protein	NA	A0A2I6PDI0	Staphylococcus_phage	100.0	3.2e-43
AXJ23664.1|2070095_2070458_-	PVL ORF-50-like family protein	NA	B7T0B4	Staphylococcus_virus	80.0	2.0e-49
AXJ23665.1|2070458_2070644_-	hypothetical protein	NA	Q4ZA46	Staphylococcus_virus	96.7	4.6e-26
AXJ23666.1|2070648_2071053_-	hypothetical protein	NA	Q9G020	Staphylococcus_virus	97.0	2.6e-66
AXJ23667.1|2071062_2071284_-	hypothetical protein	NA	A7TWN4	Staphylococcus_phage	100.0	1.3e-35
AXJ23668.1|2071296_2071455_-	hypothetical protein	NA	A0A0H3U301	Staphylococcus_phage	100.0	3.4e-22
AXJ23669.1|2071451_2072237_-	DNA replication protein DnaC	NA	A0A0H4J332	Staphylococcus_phage	100.0	1.9e-145
AXJ23670.1|2072249_2072492_-	hypothetical protein	NA	A0A0H4IP66	Staphylococcus_phage	100.0	3.1e-38
AXJ23671.1|2072623_2073061_-	hypothetical protein	NA	A0A059T619	Staphylococcus_phage	100.0	1.4e-70
AXJ23672.1|2073032_2073725_-	hypothetical protein	NA	A0A0H4ISQ1	Staphylococcus_phage	100.0	8.0e-132
AXJ23673.1|2073737_2074289_-	hypothetical protein	NA	A0A0H4IPV5	Staphylococcus_phage	100.0	3.4e-101
AXJ23674.1|2074318_2075092_-	hypothetical protein	NA	A0EWP9	Staphylococcus_virus	99.6	3.1e-140
AXJ23675.1|2075091_2075571_-	hypothetical protein	NA	A0A0H4J328	Staphylococcus_phage	100.0	1.1e-82
AXJ23676.1|2075585_2075846_-	hypothetical protein	NA	A1KX65	Staphylococcus_virus	100.0	8.9e-44
AXJ23677.1|2075850_2076153_-	hypothetical protein	NA	A0A0F6N3N3	Staphylococcus_phage	99.0	7.0e-48
AXJ23678.1|2076245_2076407_-	hypothetical protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
AXJ23679.1|2076403_2076724_-	hypothetical protein	NA	Q4ZDR7	Staphylococcus_virus	100.0	1.5e-56
AXJ23680.1|2076782_2077010_+	hypothetical protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
AXJ23681.1|2077011_2077203_-	hypothetical protein	NA	A7TWL8	Staphylococcus_phage	100.0	2.8e-26
AXJ23682.1|2077252_2077609_+	hypothetical protein	NA	A0A1P8L6H1	Staphylococcus_phage	99.2	2.3e-58
AXJ23683.1|2077603_2077798_-	hypothetical protein	NA	A0A1P8L6G6	Staphylococcus_phage	100.0	4.3e-19
AXJ23684.1|2077814_2078585_-	Phage antirepressor protein KilAC domain protein	NA	Q4ZCB0	Staphylococcus_virus	90.6	3.5e-128
AXJ23685.1|2078600_2078855_-	antitoxin HipB	NA	C5I625	Staphylococcus_phage	97.6	6.9e-41
AXJ23686.1|2079044_2079683_+	LexA repressor	NA	A0A0E3TAG1	Staphylococcus_phage	99.5	5.7e-116
AXJ23687.1|2079878_2080061_+	hypothetical protein	NA	A0A2I6PDF8	Staphylococcus_phage	98.3	9.1e-27
AXJ23688.1|2080117_2080243_+	hypothetical protein	NA	A0A2I6PF02	Staphylococcus_phage	100.0	5.1e-13
AXJ23689.1|2080239_2080854_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
AXJ23690.1|2080961_2081999_+	Tyrosine recombinase XerC	NA	A7TWL3	Staphylococcus_phage	99.7	1.7e-178
AXJ23691.1|2082055_2082880_+	Phospholipase C precursor	NA	A0A1P8L6H7	Staphylococcus_phage	99.6	2.6e-161
AXJ23692.1|2083392_2084409_-	putative leukocidin-like protein 1 precursor	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	1.1e-25
AXJ23693.1|2084430_2085486_-	putative leukocidin-like protein 2 precursor	NA	A0A1X9IGW5	Staphylococcus_phage	34.6	1.9e-36
