assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003352205.1_ASM335220v1	CP030125	Streptococcus suis strain HA1003 chromosome, complete genome	2	85432-85553	2	CRISPRCasFinder	no		cas3,DinG,csa3,DEDDh	Orphan	AACGAAAAAAAGTTTCGAAAAAGTGTTGACAA	32	1	1	85464-85521	CP030125.1_340567-340624	NA	1	1	Orphan	cas3,DinG,csa3,DEDDh	NA,NA|201aa|down_0|CP030125.1_92132_92735_+,NA|184aa|down_1|CP030125.1_92809_93361_-,NA|108aa|down_7|CP030125.1_97553_97877_-,NA|130aa|down_8|CP030125.1_97886_98276_-,NA|105aa|down_9|CP030125.1_98317_98632_-	NA|147aa|up_9|CP030125.1_78757_79198_+	PRK05592, rplO, 50S ribosomal protein L15; Reviewed	NA|437aa|up_8|CP030125.1_79211_80522_+	PRK09204, secY, preprotein translocase subunit SecY; Reviewed	NA|214aa|up_7|CP030125.1_80615_81257_+	PRK00279, adk, adenylate kinase; Reviewed	NA|73aa|up_6|CP030125.1_81378_81597_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|39aa|up_5|CP030125.1_81621_81738_+	pfam00444, Ribosomal_L36, Ribosomal protein L36	NA|122aa|up_4|CP030125.1_81757_82123_+	PRK05179, rpsM, 30S ribosomal protein S13; Validated	NA|128aa|up_3|CP030125.1_82140_82524_+	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|313aa|up_2|CP030125.1_82568_83507_+	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|129aa|up_1|CP030125.1_83521_83908_+	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|318aa|up_0|CP030125.1_84107_85061_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|201aa|down_0|CP030125.1_92132_92735_+	NA	NA|184aa|down_1|CP030125.1_92809_93361_-	NA	NA|378aa|down_2|CP030125.1_93423_94557_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|69aa|down_3|CP030125.1_94560_94767_-	pfam11372, DUF3173, Domain of unknown function (DUF3173)	NA|261aa|down_4|CP030125.1_94780_95563_-	PHA00330, PHA00330, putative replication initiation protein	NA|254aa|down_5|CP030125.1_95787_96549_-	cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain	NA|260aa|down_6|CP030125.1_96558_97338_-	cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain	NA|108aa|down_7|CP030125.1_97553_97877_-	NA	NA|130aa|down_8|CP030125.1_97886_98276_-	NA	NA|105aa|down_9|CP030125.1_98317_98632_-	NA
GCA_003352205.1_ASM335220v1	CP030125	Streptococcus suis strain HA1003 chromosome, complete genome	6	718466-718586	5	CRISPRCasFinder	no		cas3,DinG,csa3,DEDDh	Orphan	TAAGAACAAGTCCGAAGATTTTTGGACTTGTTTTT	35	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csa3,DEDDh	NA|76aa|up_2|CP030125.1_716267_716495_+,NA|62aa|down_1|CP030125.1_719416_719602_-,NA|289aa|down_5|CP030125.1_723906_724773_+	NA|410aa|up_9|CP030125.1_707801_709031_+	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|180aa|up_8|CP030125.1_709044_709584_+	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1	NA|651aa|up_7|CP030125.1_709765_711718_+	PRK05644, gyrB, DNA gyrase subunit B; Validated	NA|575aa|up_6|CP030125.1_711806_713531_+	PRK04778, PRK04778, septation ring formation regulator EzrA; Provisional	NA|212aa|up_5|CP030125.1_713582_714218_+	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|217aa|up_4|CP030125.1_714391_715042_-	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065	NA|376aa|up_3|CP030125.1_715149_716277_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|76aa|up_2|CP030125.1_716267_716495_+	NA	NA|151aa|up_1|CP030125.1_716504_716957_-	pfam07997, DUF1694, Protein of unknown function (DUF1694)	NA|436aa|up_0|CP030125.1_717106_718414_+	PRK00077, eno, enolase; Provisional	NA|216aa|down_0|CP030125.1_718741_719389_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|62aa|down_1|CP030125.1_719416_719602_-	NA	NA|335aa|down_2|CP030125.1_719665_720670_-	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller	NA|410aa|down_3|CP030125.1_721960_723190_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|239aa|down_4|CP030125.1_723193_723910_+	COG3527, AlsD, Alpha-acetolactate decarboxylase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|289aa|down_5|CP030125.1_723906_724773_+	NA	NA|553aa|down_6|CP030125.1_724828_726487_-	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA)	NA|334aa|down_7|CP030125.1_727308_728310_+	COG2984, COG2984, ABC-type uncharacterized transport system, periplasmic component [General function prediction only]	NA|289aa|down_8|CP030125.1_728332_729199_+	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|253aa|down_9|CP030125.1_729195_729954_+	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only]
GCA_003352205.1_ASM335220v1	CP030125	Streptococcus suis strain HA1003 chromosome, complete genome	7	1176116-1176189	6	CRISPRCasFinder	no		cas3,DinG,csa3,DEDDh	Orphan	TGACCTTCTAGACCTGCACTTTGA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csa3,DEDDh	NA|154aa|up_7|CP030125.1_1170986_1171448_-,NA|61aa|up_4|CP030125.1_1173196_1173379_-,NA|76aa|up_3|CP030125.1_1173467_1173695_-,NA|159aa|up_2|CP030125.1_1173887_1174364_-,NA|108aa|down_1|CP030125.1_1179024_1179348_+,NA|190aa|down_5|CP030125.1_1183243_1183813_-	NA|427aa|up_9|CP030125.1_1168481_1169762_-	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase	NA|419aa|up_8|CP030125.1_1169758_1171015_-	cd16401, ParB_N_like_MT, ParB N-terminal-like domain, some attached to C-terminal S-adenosylmethionine-dependent methyltransferase domain	NA|154aa|up_7|CP030125.1_1170986_1171448_-	NA	NA|122aa|up_6|CP030125.1_1171747_1172113_-	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|346aa|up_5|CP030125.1_1172114_1173152_-	PRK12459, PRK12459, S-adenosylmethionine synthetase; Provisional	NA|61aa|up_4|CP030125.1_1173196_1173379_-	NA	NA|76aa|up_3|CP030125.1_1173467_1173695_-	NA	NA|159aa|up_2|CP030125.1_1173887_1174364_-	NA	NA|459aa|up_1|CP030125.1_1174356_1175733_-	cd18013, DEXQc_bact_SNF2, DEXQ-box helicase domain of bacterial SNF2 family proteins	NA|94aa|up_0|CP030125.1_1175713_1175995_-	smart00990, VRR_NUC, This model contains proteins with the VRR-NUC domain	NA|761aa|down_0|CP030125.1_1176344_1178627_-	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain	NA|108aa|down_1|CP030125.1_1179024_1179348_+	NA	NA|374aa|down_2|CP030125.1_1179340_1180462_+	pfam10926, DUF2800, Protein of unknown function (DUF2800)	NA|183aa|down_3|CP030125.1_1180466_1181015_+	pfam10991, DUF2815, Protein of unknown function (DUF2815)	NA|652aa|down_4|CP030125.1_1181249_1183205_+	cd08642, DNA_pol_A_pol_I_A, Polymerase I functions primarily to fill DNA gaps that arise during DNA repair, recombination and replication	NA|190aa|down_5|CP030125.1_1183243_1183813_-	NA	NA|629aa|down_6|CP030125.1_1184208_1186095_-	pfam06114, Peptidase_M78, IrrE N-terminal-like domain	NA|101aa|down_7|CP030125.1_1186224_1186527_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|229aa|down_8|CP030125.1_1186560_1187247_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|480aa|down_9|CP030125.1_1187909_1189349_-	pfam01636, APH, Phosphotransferase enzyme family
