The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP022582	Staphylococcus aureus strain FORC_062 chromosome, complete genome	2905353	427245	452190	2905353		Streptococcus_phage(78.95%)	24	NA	NA
AXI05152.1|427245_428712_+	Inosine-5'-monophosphate dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
AXI05153.1|428736_430278_+	GMP synthase (glutamine-hydrolyzing)	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
AXI05154.1|430345_431539_-	Integrase, superantigen-encoding pathogenicity islands SaPI	NA	A0A0S2MV79	Bacillus_phage	34.2	8.3e-44
AXI05155.1|431565_431766_-	hypothetical protein	NA	NA	NA	NA	NA
AXI05156.1|432263_432494_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	78.9	1.0e-27
AXI05157.1|432490_432913_-	hypothetical protein	NA	A0A1S5SEW0	Streptococcus_phage	68.6	7.5e-48
AXI05158.1|433443_433797_+	hypothetical protein	NA	A0A1S5SFA6	Streptococcus_phage	89.7	2.2e-53
AXI05159.1|434140_436060_-	Tetracycline resistance protein TetM	NA	A0A1S5SF82	Streptococcus_phage	97.2	0.0e+00
AXI05160.1|436436_437366_-	hypothetical protein	NA	A0A1S5SF22	Streptococcus_phage	56.6	1.1e-83
AXI05161.1|437382_438405_-	lipoprotein, NLP/P60 family	NA	A0A1S5SEZ8	Streptococcus_phage	75.5	2.4e-132
AXI05162.1|438401_440429_-	membrane protein, putative	NA	A0A1S5SF30	Streptococcus_phage	65.3	5.1e-195
AXI05163.1|440425_442879_-	hypothetical protein	NA	A0A1S5SF64	Streptococcus_phage	78.9	0.0e+00
AXI05164.1|442862_443258_-	hypothetical protein	NA	A0A1S5SEX7	Streptococcus_phage	72.6	5.9e-47
AXI05165.1|443329_443968_-	hypothetical protein	NA	NA	NA	NA	NA
AXI05166.1|444023_444524_-	Antirestriction protein	NA	A0A1S5SF25	Streptococcus_phage	63.0	1.7e-54
AXI05167.1|444584_445364_-	Abortive infection C-terminus	NA	NA	NA	NA	NA
AXI05168.1|445405_445627_-	Conjugation related protein	NA	A0A1S5SEY0	Streptococcus_phage	93.2	3.1e-29
AXI05169.1|445623_445914_-	hypothetical protein	NA	NA	NA	NA	NA
AXI05170.1|445910_447095_-	Transcriptional regulator, Cro/CI family	NA	A0A1S5SEX3	Streptococcus_phage	68.1	6.3e-161
AXI05171.1|447276_448680_-	hypothetical protein	NA	A0A1S5SFB5	Streptococcus_phage	66.5	2.2e-176
AXI05172.1|448701_449475_-	hypothetical protein	NA	NA	NA	NA	NA
AXI05173.1|449484_449862_-	hypothetical protein	NA	A0A1S5SF96	Streptococcus_phage	76.4	9.6e-47
AXI05174.1|449882_450197_-	hypothetical protein	NA	A0A1S5SF38	Streptococcus_phage	77.7	1.2e-42
AXI05175.1|450396_452190_-	ATP-dependent DNA helicase UvrD/PcrA	NA	E3T5J8	Cafeteria_roenbergensis_virus	23.8	6.9e-26
>prophage 2
CP022582	Staphylococcus aureus strain FORC_062 chromosome, complete genome	2905353	796504	811145	2905353		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
AXI05483.1|796504_797563_+	Biosynthetic Aromatic amino acid aminotransferase beta	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
AXI05484.1|797901_798444_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
AXI05485.1|799322_800240_-	Transcription regulator	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
AXI05486.1|800509_802015_-	Di/tripeptide permease YjdL	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AXI05487.1|802355_802856_-	NADPH dependent preQ0 reductase	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
AXI05488.1|802875_803742_-	Integral membrane domain protein	NA	NA	NA	NA	NA
AXI05489.1|804542_804941_+	Ribonucleotide reduction protein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
AXI05490.1|804903_807009_+	Ribonucleotide reductase of class Ib(aerobic) alpha subunit	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AXI05491.1|807126_808098_+	Ribonucleotide reductase of class Ib(aerobic) beta subunit	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AXI05492.1|808472_809444_+	Iron compound ABC uptake transporter permease protein	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
AXI05493.1|809430_810387_+	Iron compound ABC uptake transporter permease protein	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AXI05494.1|810383_811145_+	Iron compound ABC uptake transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 3
CP022582	Staphylococcus aureus strain FORC_062 chromosome, complete genome	2905353	896563	942563	2905353	holin,terminase,portal,integrase,tail,capsid	Staphylococcus_phage(76.81%)	72	898375:898391	907375:907391
AXI05579.1|896563_897805_+	SulS subfamily cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	8.2e-111
AXI05580.1|897794_898259_+	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	NA	NA	NA	NA	NA
898375:898391	attL	CGCCGTTGTAAATATAT	NA	NA	NA	NA
AXI05581.1|898409_899807_+	Iron-sulfur cluster assembly protein SufB	NA	NA	NA	NA	NA
AXI05582.1|899874_900924_-|integrase	Phage integrase	integrase	A1KWY3	Staphylococcus_virus	100.0	1.6e-203
AXI05583.1|901035_901215_+	Phage excisionase	NA	A0EWN7	Staphylococcus_virus	100.0	8.3e-25
AXI05584.1|901194_902127_-	Hypothetical protein	NA	A0EWN8	Staphylococcus_virus	100.0	3.9e-174
AXI05585.1|902158_902623_-	Phage protein	NA	A0A2I6PEK4	Staphylococcus_phage	94.1	3.6e-80
AXI05586.1|902635_902965_-	Phage repressor protein	NA	A0A2I6PEN2	Staphylococcus_phage	100.0	3.2e-54
AXI05587.1|903125_903317_+	Phage protein	NA	A0A2I6PEL6	Staphylococcus_phage	100.0	2.3e-28
AXI05588.1|903538_903748_-	Phage protein	NA	W5R9J5	Staphylococcus_phage	100.0	1.2e-30
AXI05589.1|903804_904584_+	Phage antirepressor protein	NA	M1RZB2	Staphylococcus_phage	92.6	4.1e-132
AXI05590.1|904584_904809_+	Phage protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
AXI05591.1|905013_905661_-	Phage protein	NA	S4V9K2	Staphylococcus_phage	100.0	2.0e-113
AXI05592.1|905731_905953_+	Hypothetical protein	NA	E0Y3P2	Staphylococcus_virus	100.0	1.5e-31
AXI05593.1|905945_906107_+	DUF1270 domain-containing protein	NA	A0A0E3XBK7	Staphylococcus_phage	96.2	4.3e-20
AXI05594.1|906199_906502_+	Hypothetical protein	NA	A0A0F6N3N3	Staphylococcus_phage	100.0	1.4e-48
AXI05595.1|906506_906767_+	Phage protein	NA	C8CGY6	Staphylococcus_phage	100.0	8.9e-44
AXI05596.1|906776_906998_+	Hypothetical protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
AXI05597.1|906990_907113_+	Phage protein	NA	NA	NA	NA	NA
AXI05598.1|907132_907615_+	Phage protein	NA	A0A2H4PQQ6	Staphylococcus_phage	99.4	1.0e-85
907375:907391	attR	ATATATTTACAACGGCG	NA	NA	NA	NA
AXI05599.1|907614_908040_+	Single-stranded DNA-binding protein	NA	B7T0A5	Staphylococcus_virus	88.7	2.1e-58
AXI05600.1|908050_908602_+	HNH homing endonuclease	NA	A0A2H4PQR4	Staphylococcus_phage	98.9	5.1e-105
AXI05601.1|908602_909277_+	Hypothetical protein	NA	R4IH15	Staphylococcus_phage	97.8	1.5e-127
AXI05602.1|909416_909698_-	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
AXI05603.1|909762_910494_+	hypothetical protein	NA	A0A1J0MGB2	Staphylococcus_phage	78.8	9.8e-80
AXI05604.1|910506_911292_+	DNA replication protein dnaC	NA	A0A0H4J332	Staphylococcus_phage	100.0	1.9e-145
AXI05605.1|911459_911681_+	Phage protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
AXI05606.1|911690_912095_+	Phage protein	NA	A7TWN5	Staphylococcus_phage	100.0	7.1e-72
AXI05607.1|912099_912285_+	Hypothetical protein	NA	W5R8N4	Staphylococcus_phage	100.0	1.4e-27
AXI05608.1|912285_912657_+	Hypothetical protein	NA	A7TWN6	Staphylococcus_phage	95.9	4.0e-53
AXI05609.1|912657_912906_+	Phage protein	NA	S4V683	Staphylococcus_phage	97.6	8.8e-41
AXI05610.1|912920_913169_+	DUF1024 domain-containing protein	NA	A0A2H4PQK1	Staphylococcus_phage	93.9	1.7e-36
AXI05611.1|913161_913698_+	Dimeric dUTPase	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
AXI05612.1|913734_913941_+	DUF1381 domain-containing protein	NA	A0A1W6JPM8	Staphylococcus_phage	100.0	4.9e-21
AXI05613.1|913937_914132_+	Phage protein	NA	S4SX95	Staphylococcus_phage	100.0	7.9e-29
AXI05614.1|914128_914332_+	Phage protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
AXI05615.1|914324_914561_+	Hypothetical protein	NA	S4SWB7	Staphylococcus_phage	100.0	1.6e-36
AXI05616.1|914553_914937_+	Transcriptional activator rinB, phage associated	NA	Q4ZBS3	Staphylococcus_virus	99.2	3.3e-63
AXI05617.1|914936_915110_+	Transcriptional activator rinB, phage associated	NA	S4SVE4	Staphylococcus_phage	98.2	1.1e-21
AXI05618.1|915110_915257_+	Phage protein	NA	Q4ZDN7	Staphylococcus_virus	100.0	1.3e-15
AXI05619.1|915271_915691_+	Integrase regulator RinA	NA	I1W651	Staphylococcus_phage	100.0	8.1e-71
AXI05620.1|915877_916318_+|terminase	Phage terminase, small subunit	terminase	I1W650	Staphylococcus_phage	99.3	2.4e-73
AXI05621.1|916304_917582_+|terminase	Phage terminase, large subunit	terminase	A0EWS5	Staphylococcus_virus	99.8	5.1e-249
AXI05622.1|917592_919128_+|portal	Phage portal protein	portal	Q4ZDV9	Staphylococcus_virus	99.4	9.3e-290
AXI05623.1|919134_920130_+	Phage protein	NA	E0Y3K7	Staphylococcus_virus	100.0	3.4e-184
AXI05624.1|920202_920373_+	Phage protein	NA	Q4ZDF2	Staphylococcus_virus	100.0	3.3e-23
AXI05625.1|920507_921122_+|capsid	Phage capsid and scaffold	capsid	A0EWS9	Staphylococcus_virus	100.0	4.9e-40
AXI05626.1|921135_921444_+|capsid	Phage major capsid protein	capsid	Q8SDU5	Staphylococcus_phage	100.0	1.0e-46
AXI05627.1|921440_922109_+|capsid	Phage major capsid protein	capsid	S4V686	Staphylococcus_phage	100.0	6.1e-121
AXI05628.1|922130_922418_+	Phage transcriptional terminator	NA	S4V6D9	Staphylococcus_phage	98.9	6.8e-45
AXI05629.1|922426_922759_+	Phage protein	NA	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
AXI05630.1|922755_923058_+	hypothetical protein	NA	S4V7K8	Staphylococcus_phage	100.0	1.1e-50
AXI05631.1|923057_923405_+	Phage protein	NA	S4V987	Staphylococcus_phage	100.0	3.1e-60
AXI05632.1|923416_923800_+	Phage protein	NA	A0A0F6N3L1	Staphylococcus_phage	100.0	1.5e-68
AXI05633.1|923818_924400_+|tail	Phage tail protein	tail	A0A0F6N3L8	Staphylococcus_phage	100.0	4.9e-106
AXI05634.1|924461_924827_+	Phage protein	NA	S4V9M6	Staphylococcus_phage	100.0	2.8e-59
AXI05635.1|924856_925201_+	Hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
AXI05636.1|925217_928682_+	Tape measure protein	NA	S4V989	Staphylococcus_phage	100.0	5.8e-271
AXI05637.1|928694_929642_+|tail	phage tail family protein	tail	S4V688	Staphylococcus_phage	100.0	3.6e-183
AXI05638.1|929650_931552_+	Phage minor structural protein	NA	Q4ZDD8	Staphylococcus_virus	100.0	0.0e+00
AXI05639.1|931566_932061_+	Putative major teichoic acid biosynthesis protein C	NA	I1W633	Staphylococcus_phage	100.0	4.1e-90
AXI05640.1|932097_933477_+	Putative major teichoic acid biosynthesis protein C	NA	A1KX41	Staphylococcus_virus	99.8	1.3e-279
AXI05641.1|933476_935300_+	hypothetical protein	NA	W5R8J5	Staphylococcus_phage	99.2	7.4e-294
AXI05642.1|935299_935677_+	Phage protein	NA	Q9FZY7	Staphylococcus_virus	99.2	3.4e-60
AXI05643.1|935680_935854_+	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
AXI05644.1|935894_936194_+	Phage protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AXI05645.1|936330_938229_+	Phage lysin, N-acetylmuramoyl-L-alanine amidase	NA	Q8SDT1	Staphylococcus_phage	99.8	0.0e+00
AXI05646.1|938241_939480_+	Tail fiber protein	NA	A0A0F6N3G7	Staphylococcus_phage	98.1	2.7e-207
AXI05647.1|939485_939881_+	Phage protein	NA	A0A0E3XBL9	Staphylococcus_phage	97.7	1.4e-67
AXI05648.1|939936_940374_+|holin	Phage holin	holin	Q8SDS8	Staphylococcus_phage	99.3	6.9e-73
AXI05649.1|940354_941800_+	Phage lysin, N-acetylmuramoyl-L-alanine amidase	NA	Q08JW9	Staphylococcus_phage	99.8	1.8e-295
AXI05650.1|942362_942563_+	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
>prophage 4
CP022582	Staphylococcus aureus strain FORC_062 chromosome, complete genome	2905353	1100313	1113950	2905353		Synechococcus_phage(33.33%)	15	NA	NA
AXI05795.1|1100313_1100733_+	AIR carboxylase	NA	A0A2P0VNU7	Tetraselmis_virus	45.8	1.2e-18
AXI05796.1|1100719_1101844_+	Phosphoribosylaminoimidazole carboxylase ATPase subunit	NA	NA	NA	NA	NA
AXI05797.1|1101847_1102552_+	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
AXI05798.1|1102551_1102815_+	Phosphoribosylformylglycinamidine synthase, PurS subunit	NA	NA	NA	NA	NA
AXI05799.1|1102816_1103488_+	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit	NA	NA	NA	NA	NA
AXI05800.1|1103480_1105670_+	Phosphoribosylformylglycinamidine synthase, synthetase subunit	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
AXI05801.1|1105648_1107133_+	Amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
AXI05802.1|1107125_1107848_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F0L1	Synechococcus_phage	44.8	6.0e-37
AXI05803.1|1107844_1108153_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.0	5.0e-17
AXI05804.1|1108155_1108374_+	Phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
AXI05805.1|1108424_1108721_+	Phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	49.5	9.6e-18
AXI05806.1|1108735_1110214_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.8	3.2e-77
AXI05807.1|1110235_1111483_+	Phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
AXI05808.1|1111750_1112557_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
AXI05809.1|1112549_1113950_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.3	1.1e-10
>prophage 5
CP022582	Staphylococcus aureus strain FORC_062 chromosome, complete genome	2905353	1160401	1243354	2905353	transposase,holin,terminase,portal,tRNA,tail,capsid,head	Staphylococcus_phage(91.55%)	103	NA	NA
AXI05856.1|1160401_1160884_+	Phosphopantetheine adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
AXI05857.1|1160945_1162085_-	UPF0348 protein family	NA	NA	NA	NA	NA
AXI05858.1|1162211_1162769_+	protein in cluster with ribosomal protein L32p, Firmicutes subfamily	NA	NA	NA	NA	NA
AXI05859.1|1162848_1163022_+	LSU ribosomal protein L32p	NA	NA	NA	NA	NA
AXI05860.1|1163138_1164524_-	Phage DNA invertase	NA	I1W625	Staphylococcus_phage	100.0	2.5e-265
AXI05861.1|1164730_1165411_-	Pathogenicity island SaPIn2	NA	A0A2H4PQQ5	Staphylococcus_phage	100.0	5.1e-123
AXI05862.1|1165442_1166168_-	hypothetical protein	NA	A0A0F6N4L7	Staphylococcus_phage	100.0	9.9e-125
AXI05863.1|1166195_1166858_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	100.0	1.6e-121
AXI05864.1|1166887_1167220_-	Phage transcriptional regulator, Cro/CI family	NA	R4IH08	Staphylococcus_phage	99.1	7.6e-56
AXI05865.1|1167482_1167677_+	Phage repressor	NA	A0A0F6N3M9	Staphylococcus_phage	100.0	1.1e-25
AXI05866.1|1167676_1168441_+	Phage antirepressor protein	NA	R4IFK0	Staphylococcus_phage	99.6	2.7e-141
AXI05867.1|1168457_1168652_+	hypothetical protein	NA	E9LT75	Staphylococcus_phage	100.0	1.2e-29
AXI05868.1|1168704_1168881_+	Phage protein	NA	S4SVC9	Staphylococcus_phage	100.0	9.7e-26
AXI05869.1|1168855_1169086_-	hypothetical protein	NA	R4IG40	Staphylococcus_phage	100.0	2.3e-35
AXI05870.1|1169265_1169433_+	DUF1270 domain-containing protein	NA	S4V7J2	Staphylococcus_phage	100.0	9.5e-23
AXI05871.1|1169433_1169754_+	hypothetical protein	NA	S4V968	Staphylococcus_phage	100.0	4.8e-55
AXI05872.1|1169847_1170108_+	DUF1108 domain-containing protein	NA	A0A059T5A3	Staphylococcus_phage	100.0	1.2e-43
AXI05873.1|1170116_1170380_+	Phage protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
AXI05874.1|1170388_1172332_+	ATPase involved in DNA repair, phage associated	NA	S4V9K6	Staphylococcus_phage	100.0	0.0e+00
AXI05875.1|1172333_1173254_+	Recombinational DNA repair protein RecT (prophage associated)	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
AXI05876.1|1173466_1173952_+	Metallo-beta-lactamase superfamily domain protein in prophage	NA	S4V971	Staphylococcus_phage	100.0	9.4e-87
AXI05877.1|1173952_1174423_+	Single-stranded DNA-binding protein	NA	S4V682	Staphylococcus_phage	100.0	2.6e-81
AXI05878.1|1174452_1175340_+	Phage replication initiation protein	NA	S4V6D4	Staphylococcus_phage	99.7	3.2e-141
AXI05879.1|1175346_1175565_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
AXI05880.1|1175573_1175978_+	Phage Holliday junction resolvase	NA	S4V7J7	Staphylococcus_phage	100.0	3.8e-73
AXI05881.1|1175990_1176368_+	phage protein	NA	S4V974	Staphylococcus_phage	100.0	1.6e-54
AXI05882.1|1176452_1176617_+	Phage protein	NA	S4SVD3	Staphylococcus_phage	98.1	7.6e-25
AXI05883.1|1176629_1177031_+	Phage protein	NA	S4V6D5	Staphylococcus_phage	100.0	6.6e-70
AXI05884.1|1177027_1177312_+	Phage protein	NA	S4V9L1	Staphylococcus_phage	100.0	3.2e-47
AXI05885.1|1177304_1177553_+	hypothetical protein	NA	S4V7K0	Staphylococcus_phage	100.0	4.1e-38
AXI05886.1|1177545_1178082_+	Dimeric dUTPase	NA	S4V978	Staphylococcus_phage	100.0	9.4e-96
AXI05887.1|1178118_1178292_+	hypothetical protein	NA	S4SVD5	Staphylococcus_phage	100.0	3.6e-25
AXI05888.1|1178308_1178515_+	DUF1381 domain-containing protein	NA	A0A1W6JPM8	Staphylococcus_phage	100.0	4.9e-21
AXI05889.1|1178511_1178706_+	phage protein	NA	S4SX95	Staphylococcus_phage	100.0	7.9e-29
AXI05890.1|1178702_1178906_+	Phage protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
AXI05891.1|1178898_1179135_+	Hypothetical protein	NA	S4SWB7	Staphylococcus_phage	100.0	1.6e-36
AXI05892.1|1179127_1179511_+	Transcriptional activator rinB, phage associated	NA	Q4ZBS3	Staphylococcus_virus	99.2	3.3e-63
AXI05893.1|1179510_1179684_+	Transcriptional activator rinB, phage associated	NA	S4SVE4	Staphylococcus_phage	98.2	1.1e-21
AXI05894.1|1179684_1179831_+	Phage protein	NA	S4V9L4	Staphylococcus_phage	100.0	1.7e-15
AXI05895.1|1179854_1180277_+	Mobile element protein	NA	Q4ZBJ7	Staphylococcus_phage	100.0	1.2e-74
AXI05896.1|1180604_1181099_+	Terminase small subunit	NA	R4IH30	Staphylococcus_phage	100.0	1.1e-74
AXI05897.1|1181091_1182300_+|terminase	Phage terminase, large subunit	terminase	R4IG95	Staphylococcus_phage	100.0	6.1e-236
AXI05898.1|1182313_1183732_+|portal	Phage portal protein	portal	R4IFL5	Staphylococcus_phage	100.0	1.0e-274
AXI05899.1|1183688_1184651_+|capsid	Phage minor capsid protein	capsid	R4II65	Staphylococcus_phage	100.0	4.6e-178
AXI05900.1|1184748_1185345_+|capsid	Phage capsid and scaffold	capsid	R4IG73	Staphylococcus_phage	100.0	5.6e-73
AXI05901.1|1185365_1186190_+|capsid	Phage major capsid protein	capsid	R4IH32	Staphylococcus_phage	100.0	5.6e-148
AXI05902.1|1186206_1186533_+	Phage transcriptional terminator	NA	A0A0E3TAL3	Staphylococcus_phage	100.0	4.3e-51
AXI05903.1|1186532_1186847_+|capsid	Phage capsid and scaffold	capsid	R4IFL8	Staphylococcus_phage	100.0	4.0e-54
AXI05904.1|1186839_1187175_+|head,tail	Phage head-tail adaptor	head,tail	A0A2H4PQL0	Staphylococcus_phage	100.0	3.0e-60
AXI05905.1|1187224_1187575_+|capsid	Phage capsid and scaffold	capsid	R4IG77	Staphylococcus_phage	100.0	3.6e-64
AXI05906.1|1187587_1188025_+	Phage protein	NA	A0A0E3T9M9	Staphylococcus_phage	100.0	2.1e-77
AXI05907.1|1188011_1188572_+	Phage protein	NA	A0A0H4ITY2	Staphylococcus_phage	100.0	5.9e-101
AXI05908.1|1188633_1189128_+	Phage protein	NA	R4IFM1	Staphylococcus_phage	100.0	4.3e-87
AXI05909.1|1189196_1189490_+	Phage protein	NA	A0A2H4PQL5	Staphylococcus_phage	100.0	7.5e-47
AXI05910.1|1189492_1192462_+|tail	Phage tail length tape-measure protein	tail	R4IG82	Staphylococcus_phage	100.0	5.3e-281
AXI05911.1|1192476_1193412_+|tail	Phage tail protein	tail	R4IH41	Staphylococcus_phage	100.0	8.2e-180
AXI05912.1|1193422_1195309_+	Phage minor structural protein	NA	R4IGA4	Staphylococcus_phage	99.8	0.0e+00
AXI05913.1|1195321_1197220_+	Putative major teichoic acid biosynthesis protein C	NA	R4IFM4	Staphylococcus_phage	100.0	0.0e+00
AXI05914.1|1197219_1199043_+	hypothetical protein	NA	A0A0H4ISS3	Staphylococcus_phage	99.2	0.0e+00
AXI05915.1|1199042_1199450_+	Phage protein	NA	R4IG87	Staphylococcus_phage	100.0	2.9e-57
AXI05916.1|1199421_1199598_+	phage uncharacterized protein, XkdX family	NA	Q8LTH6	Staphylococcus_phage	100.0	6.1e-28
AXI05917.1|1199638_1199857_+	phage protein	NA	Q8LTH5	Staphylococcus_phage	92.6	6.4e-27
AXI05918.1|1200073_1200184_+	cell wall hydrolase	NA	A7VMY9	Staphylococcus_phage	97.2	2.0e-13
AXI05919.1|1200429_1201050_+	Phage protein	NA	A0A2H4J2S8	uncultured_Caudovirales_phage	43.4	4.3e-36
AXI05920.1|1201235_1202930_+	Phage lysin, N-acetylmuramoyl-L-alanine amidase	NA	A0A2I6PCX0	Staphylococcus_phage	99.3	0.0e+00
AXI05921.1|1202942_1204115_+	Tail fiber protein	NA	S4SUQ8	Staphylococcus_phage	99.2	9.2e-197
AXI05922.1|1204120_1204516_+	Phage protein	NA	S4SWE0	Staphylococcus_phage	99.2	1.6e-68
AXI05923.1|1204571_1205009_+|holin	Phage holin	holin	S4SVG2	Staphylococcus_phage	100.0	2.4e-73
AXI05924.1|1204989_1206435_+	Phage lysin, N-acetylmuramoyl-L-alanine amidase	NA	B2ZZ06	Staphylococcus_phage	99.0	1.7e-293
AXI05925.1|1206997_1207198_+	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
AXI05926.1|1207608_1209546_-	Cell surface receptor IsdB for hemoglobin and hemoglobin-haptoglobin complexes	NA	NA	NA	NA	NA
AXI05927.1|1209748_1210801_-	Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC	NA	NA	NA	NA	NA
AXI05928.1|1211009_1211693_+	NPQTN cell wall anchored protein IsdC	NA	NA	NA	NA	NA
AXI05929.1|1211692_1212769_+	Heme transporter IsdDEF, membrane component IsdD	NA	NA	NA	NA	NA
AXI05930.1|1212897_1213644_+	Heme transporter IsdDEF, lipoprotein IsdE	NA	NA	NA	NA	NA
AXI05931.1|1213656_1214622_+	FecCD transport family	NA	NA	NA	NA	NA
AXI05932.1|1214683_1215418_+	NPQTN specific sortase B	NA	NA	NA	NA	NA
AXI05933.1|1215436_1215760_+	Heme-degrading monooxygenase IsdI	NA	NA	NA	NA	NA
AXI05934.1|1216143_1216884_+	rRNA methylase	NA	NA	NA	NA	NA
AXI05935.1|1217263_1218322_+|tRNA	Phenylalanyl-tRNA synthetase alpha chain	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
AXI05936.1|1218321_1220724_+|tRNA	Phenylalanyl-tRNA synthetase beta chain	tRNA	NA	NA	NA	NA
AXI05937.1|1221155_1222094_-	Ribonuclease HIII	NA	NA	NA	NA	NA
AXI05938.1|1222463_1222730_+	Z-ring-associated protein	NA	NA	NA	NA	NA
AXI05939.1|1222730_1223252_+	Colicin V production protein	NA	NA	NA	NA	NA
AXI05940.1|1223324_1225037_+	DNA polymerase X family	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	6.8e-15
AXI05941.1|1225046_1227395_+	Recombination inhibitory protein MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.4	3.2e-15
AXI05942.1|1227567_1227882_+	Thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
AXI05943.1|1228205_1229987_+	Excinuclease ABC subunit C	NA	NA	NA	NA	NA
AXI05944.1|1230310_1230925_+	Succinate dehydrogenase cytochrome b558 subunit	NA	NA	NA	NA	NA
AXI05945.1|1230976_1232743_+	Succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
AXI05946.1|1232742_1233558_+	Succinate dehydrogenase iron-sulfur protein	NA	NA	NA	NA	NA
AXI05947.1|1233793_1234594_+	Glutamate racemase	NA	NA	NA	NA	NA
AXI05948.1|1234605_1235193_+	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific)	NA	NA	NA	NA	NA
AXI05949.1|1235185_1235689_+	phosphoesterase	NA	NA	NA	NA	NA
AXI05950.1|1236177_1236507_+	Hypothetical protein	NA	NA	NA	NA	NA
AXI05951.1|1236875_1237277_-	hypothetical protein	NA	NA	NA	NA	NA
AXI05952.1|1237946_1238453_+	hypothetical protein	NA	NA	NA	NA	NA
AXI05953.1|1238712_1239210_+	Extracellular fibrinogen-binding protein Efb	NA	NA	NA	NA	NA
AXI05954.1|1239359_1239710_+	fibrinogen-binding protein	NA	NA	NA	NA	NA
AXI05955.1|1240071_1240269_+	hypothetical protein	NA	NA	NA	NA	NA
AXI05956.1|1240475_1240661_-	hypothetical protein	NA	NA	NA	NA	NA
AXI05957.1|1241282_1241516_-	hypothetical protein	NA	NA	NA	NA	NA
AXI05958.1|1242034_1243354_+|transposase	zinc-finger of transposase IS204/IS1001/IS1096/IS1165	transposase	NA	NA	NA	NA
>prophage 6
CP022582	Staphylococcus aureus strain FORC_062 chromosome, complete genome	2905353	1411943	1416622	2905353		Staphylococcus_phage(83.33%)	7	NA	NA
AXI06107.1|1411943_1412141_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
AXI06108.1|1412839_1413052_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	72.5	4.8e-19
AXI06109.1|1413345_1413552_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
AXI06110.1|1414785_1414971_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
AXI06111.1|1415713_1415965_+	hypothetical protein	NA	NA	NA	NA	NA
AXI06112.1|1416010_1416247_+	Phage protein	NA	Q4ZE35	Staphylococcus_virus	70.6	2.3e-22
AXI06113.1|1416328_1416622_+	hypothetical protein	NA	A0A1J0MFV1	Staphylococcus_phage	33.3	1.4e-05
>prophage 7
CP022582	Staphylococcus aureus strain FORC_062 chromosome, complete genome	2905353	1594425	1681008	2905353	holin,terminase,portal,protease,tRNA,integrase,tail,capsid	Staphylococcus_phage(81.58%)	101	1630704:1630729	1675405:1675430
AXI06256.1|1594425_1595718_-|tRNA	Asparaginyl-tRNA synthetase	tRNA	M1PB22	Moumouvirus	31.3	8.7e-55
AXI06257.1|1596039_1598733_-	DinG family ATP-dependent helicase YoaA	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
AXI06258.1|1598756_1599728_-	Biotin operon repressor / Biotin-protein ligase	NA	NA	NA	NA	NA
AXI06259.1|1599714_1600917_-|tRNA	tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	4.2e-35
AXI06260.1|1600921_1602064_-	Glycosyl transferase, group 1 family protein	NA	NA	NA	NA	NA
AXI06261.1|1602307_1602625_-	MazG nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
AXI06262.1|1602960_1603659_-	putative metal-dependent peptidase	NA	NA	NA	NA	NA
AXI06263.1|1603712_1604300_-	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
AXI06264.1|1604289_1604865_-	hypothetical protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
AXI06265.1|1604878_1606123_-	TPR-repeat-containing protein, putative component of Menaquinone-cytochrome C reductase	NA	NA	NA	NA	NA
AXI06266.1|1606129_1607428_-	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)	NA	NA	NA	NA	NA
AXI06267.1|1607437_1608502_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
AXI06268.1|1608527_1609694_-	Chorismate synthase	NA	A0A291AU41	Pandoravirus	31.8	5.8e-34
AXI06269.1|1610078_1610279_-	hypothetical protein	NA	NA	NA	NA	NA
AXI06270.1|1610487_1610937_-	Nucleoside diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
AXI06271.1|1611028_1611988_-	Heptaprenyl diphosphate synthase component II	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
AXI06272.1|1611989_1612715_-	2-heptaprenyl-1,4-naphthoquinone methyltransferase	NA	NA	NA	NA	NA
AXI06273.1|1612717_1613290_-	Heptaprenyl diphosphate synthase component I	NA	NA	NA	NA	NA
AXI06274.1|1613720_1613993_-	DNA-binding protein HBsu	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
AXI06275.1|1614163_1615162_-	Glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AXI06276.1|1615178_1616489_-	GTP-binding protein EngA	NA	NA	NA	NA	NA
AXI06277.1|1616710_1617886_-	SSU ribosomal protein S1p	NA	NA	NA	NA	NA
AXI06278.1|1618597_1619257_-	Cytidylate kinase	NA	NA	NA	NA	NA
AXI06279.1|1619333_1620302_+	L-asparaginase	NA	NA	NA	NA	NA
AXI06280.1|1620416_1621403_-	Thioredoxin reductase	NA	NA	NA	NA	NA
AXI06281.1|1621804_1623265_-	Elastin binding protein EbpS	NA	NA	NA	NA	NA
AXI06282.1|1623417_1624797_-	ATP-dependent DNA helicase RecS (RecQ family)	NA	A0A2P1EM61	Moumouvirus	33.6	1.4e-55
AXI06283.1|1624786_1625740_-	hypothetical protein	NA	NA	NA	NA	NA
AXI06284.1|1625847_1626096_+	4Fe-4S single cluster domain of Ferredoxin I	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
AXI06285.1|1626201_1626747_-	Substrate-specific component RibU of riboflavin ECF transporter	NA	NA	NA	NA	NA
AXI06286.1|1627148_1628105_-	hypothetical protein	NA	NA	NA	NA	NA
AXI06287.1|1628245_1628500_-	hypothetical protein	NA	NA	NA	NA	NA
AXI06288.1|1628575_1629472_-	hypothetical protein	NA	NA	NA	NA	NA
AXI06289.1|1629529_1630435_-	hypothetical protein	NA	NA	NA	NA	NA
AXI06290.1|1630524_1630740_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
1630704:1630729	attL	TAAACATATCATCATAATGTGATGGT	NA	NA	NA	NA
AXI06291.1|1631461_1632916_-	Phage lysin, N-acetylmuramoyl-L-alanine amidase	NA	U5U7D2	Staphylococcus_phage	100.0	2.6e-289
AXI06292.1|1632926_1633229_-|holin	Phage holin	holin	A0A2I6PET6	Staphylococcus_phage	100.0	7.0e-48
AXI06293.1|1633364_1633664_-	Phage protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AXI06294.1|1633709_1633874_-	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AXI06295.1|1633866_1634256_-	Phage protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
AXI06296.1|1634255_1635722_-	Phage protein	NA	M1TB09	Staphylococcus_phage	99.8	1.0e-253
AXI06297.1|1635721_1637632_-	Putative major teichoic acid biosynthesis protein C	NA	U5U4Q1	Staphylococcus_phage	100.0	0.0e+00
AXI06298.1|1637647_1637938_-	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
AXI06299.1|1637937_1639521_-|tail	Phage tail fiber	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
AXI06300.1|1639529_1640354_-|tail	Phage tail fiber	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
AXI06301.1|1640353_1646554_-|tail	Phage tail length tape-measure protein	tail	U5U762	Staphylococcus_phage	99.7	0.0e+00
AXI06302.1|1646567_1646726_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AXI06303.1|1646776_1647118_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.5e-54
AXI06304.1|1647175_1647631_-|tail	Phage major tail protein	tail	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
AXI06305.1|1647722_1648364_-|tail	Phage major tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
AXI06306.1|1648398_1648794_-	DUF3168 domain-containing protein	NA	A0A2I6PEQ4	Staphylococcus_phage	100.0	8.8e-67
AXI06307.1|1648794_1649196_-	hypothetical protein	NA	A0A2I6PF54	Staphylococcus_phage	100.0	8.1e-68
AXI06308.1|1649192_1649525_-	Phage protein	NA	A0A2I6PES3	Staphylococcus_phage	100.0	4.1e-57
AXI06309.1|1649536_1649815_-	hypothetical protein	NA	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
AXI06310.1|1649883_1651047_-|capsid	Phage major capsid protein	capsid	A0A2I6PEQ3	Staphylococcus_phage	100.0	1.2e-217
AXI06311.1|1651058_1651832_-|protease	Prophage Clp protease-like protein	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
AXI06312.1|1651815_1653054_-|portal	Phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	100.0	6.9e-235
AXI06313.1|1653058_1654750_-|terminase	Phage terminase, large subunit	terminase	A0A2K9VBQ1	Staphylococcus_phage	100.0	0.0e+00
AXI06314.1|1654739_1655045_-|terminase	Phage terminase small subunit	terminase	U5U414	Staphylococcus_phage	100.0	2.9e-49
AXI06315.1|1655169_1655490_-	Phage-associated homing endonuclease	NA	A0A2K9VBV6	Staphylococcus_phage	100.0	3.0e-57
AXI06316.1|1655646_1656084_-	Phage regulatory protein	NA	A0A2K9VBV2	Staphylococcus_phage	100.0	6.1e-77
AXI06317.1|1656096_1657455_-	DNA helicase, phage-associated	NA	A0A1X9IH01	Staphylococcus_phage	100.0	1.6e-261
AXI06318.1|1657444_1657735_-	Phage protein	NA	U5U7A3	Staphylococcus_phage	100.0	4.9e-51
AXI06319.1|1657929_1658052_+	Phage protein	NA	Q4ZCF9	Staphylococcus_virus	95.0	6.9e-15
AXI06320.1|1658075_1660523_-	DNA primase, phage associated	NA	A0A2I6PEP4	Staphylococcus_phage	100.0	0.0e+00
AXI06321.1|1660810_1661011_-	Phage protein	NA	A0A2I6PEP5	Staphylococcus_phage	100.0	4.9e-26
AXI06322.1|1661078_1661231_-	Transcriptional activator rinB, phage associated	NA	A0A2I6PEM5	Staphylococcus_phage	100.0	2.0e-19
AXI06323.1|1661227_1661434_-	DUF1381 domain-containing protein	NA	S4V684	Staphylococcus_phage	100.0	7.6e-30
AXI06324.1|1661470_1662007_-	Dimeric dUTPase	NA	A0A2K9VBU6	Staphylococcus_phage	98.9	3.0e-94
AXI06325.1|1661999_1662248_-	Phage protein	NA	S4V7K0	Staphylococcus_phage	100.0	4.1e-38
AXI06326.1|1662240_1662549_-	Phage protein	NA	U5U489	Staphylococcus_phage	100.0	2.8e-52
AXI06327.1|1662545_1662893_-	Phage protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
AXI06328.1|1662889_1663270_-	Phage protein	NA	A0A2K9VBT5	Staphylococcus_phage	100.0	8.4e-67
AXI06329.1|1663272_1663479_-	Phage protein	NA	A0A2K9VBT9	Staphylococcus_phage	100.0	3.0e-34
AXI06330.1|1663492_1663735_-	Phage protein	NA	A0A2K9VBX5	Staphylococcus_phage	100.0	1.1e-40
AXI06331.1|1663740_1663995_-	Phage protein	NA	A0A2K9VBW1	Staphylococcus_phage	100.0	1.6e-42
AXI06332.1|1663991_1664396_-	Phage protein	NA	A0A2K9VBY6	Staphylococcus_phage	100.0	3.3e-69
AXI06333.1|1664395_1664581_-	Phage protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
AXI06334.1|1664593_1666555_-	DNA polymerase I	NA	A0A2K9VBT3	Staphylococcus_phage	100.0	0.0e+00
AXI06335.1|1666613_1667171_-	Phage protein	NA	A0A2K9VBT2	Staphylococcus_phage	100.0	1.8e-97
AXI06336.1|1667196_1668363_-	Phage protein	NA	A0A2K9VBU5	Staphylococcus_phage	100.0	7.0e-221
AXI06337.1|1668359_1668722_-	Phage protein	NA	A0A2K9VBV1	Staphylococcus_phage	100.0	6.4e-56
AXI06338.1|1668736_1669060_-	Phage protein	NA	A7TWG2	Staphylococcus_phage	100.0	5.0e-52
AXI06339.1|1669138_1669300_-	DUF1270 domain-containing protein	NA	A7TWG1	Staphylococcus_phage	100.0	6.6e-21
AXI06340.1|1669311_1669575_-	Phage protein	NA	A0A2K9VBS9	Staphylococcus_phage	100.0	5.7e-46
AXI06341.1|1669599_1669815_-	Phage protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
AXI06342.1|1669869_1670235_+	Phage protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
AXI06343.1|1670203_1670449_-	Phage protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
AXI06344.1|1670504_1670714_+	Phage protein	NA	W5R9J5	Staphylococcus_phage	100.0	1.2e-30
AXI06345.1|1670703_1670847_-	Phage protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
AXI06346.1|1670861_1671305_-	hypothetical protein	NA	U5U777	Staphylococcus_phage	100.0	2.3e-76
AXI06347.1|1671328_1671550_-	DUF739 domain-containing protein	NA	U5U4R4	Staphylococcus_phage	100.0	5.8e-36
AXI06348.1|1671710_1672481_+	Phage repressor	NA	U5U470	Staphylococcus_phage	100.0	6.2e-141
AXI06349.1|1672635_1672821_+	hypothetical protein	NA	U5U7D6	Staphylococcus_phage	100.0	2.3e-25
AXI06350.1|1672890_1673058_+	hypothetical protein	NA	U5U774	Staphylococcus_phage	100.0	1.7e-24
AXI06351.1|1673197_1673902_+	Pathogenicity island SaPIn2	NA	U5U4R0	Staphylococcus_phage	100.0	4.6e-127
AXI06352.1|1674112_1675318_+|integrase	Phage integrase	integrase	U5U466	Staphylococcus_phage	100.0	1.0e-222
AXI06353.1|1675360_1677388_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	99.5	8.1e-116
1675405:1675430	attR	TAAACATATCATCATAATGTGATGGT	NA	NA	NA	NA
AXI06354.1|1677380_1678250_-	hypothetical protein	NA	NA	NA	NA	NA
AXI06355.1|1678550_1680245_-	Osmosensitive K+ channel histidine kinase KdpD	NA	A0A1V0SGX0	Hokovirus	33.2	2.2e-21
AXI06356.1|1680282_1681008_-	respiratory response protein SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 8
CP022582	Staphylococcus aureus strain FORC_062 chromosome, complete genome	2905353	1815965	1825008	2905353	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AXI06497.1|1815965_1816484_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
AXI06498.1|1816505_1818779_-	Single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
AXI06499.1|1818981_1821261_-	Protein-export membrane protein SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AXI06500.1|1821535_1821796_-	Preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AXI06501.1|1821814_1822954_-|tRNA	tRNA-guanine transglycosylase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AXI06502.1|1822976_1824002_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AXI06503.1|1824003_1825008_-	Holliday junction DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 9
CP022582	Staphylococcus aureus strain FORC_062 chromosome, complete genome	2905353	1960304	2018875	2905353	tRNA,transposase,protease	Staphylococcus_phage(92.0%)	59	NA	NA
AXI06617.1|1960304_1963229_-	putative cell-wall-anchored protein SasC (LPXTG motif)	NA	A0A2H4PQU6	Staphylococcus_phage	99.2	2.6e-163
AXI06618.1|1963554_1963866_-	Rhodanese-like domain protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
AXI06619.1|1963887_1966305_-|tRNA	Leucyl-tRNA synthetase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
AXI06620.1|1966592_1967774_-	Multidrug resistance protein B	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
AXI06621.1|1967883_1968837_+	putative Fe-S oxidoreductase	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AXI06622.1|1968833_1969397_+	SAM-dependent methyltransferase, MraW methylase family	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
AXI06623.1|1969519_1969921_-	Repressor of toxins Rot	NA	NA	NA	NA	NA
AXI06624.1|1970490_1971318_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXI06625.1|1971551_1972553_+	Proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
AXI06626.1|1972674_1973139_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
AXI06627.1|1973151_1974333_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
AXI06628.1|1974343_1974976_-	Riboflavin synthase eubacterial/eukaryotic	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
AXI06629.1|1974982_1976026_-	riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.5	4.5e-195
AXI06630.1|1976506_1978009_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
AXI06631.1|1978531_1978846_+	Bacterial regulatory protein, arsR family	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
AXI06632.1|1978845_1980138_+	Arsenic efflux pump protein	NA	A0A2H4PQU3	Staphylococcus_phage	99.1	4.2e-227
AXI06633.1|1980224_1981079_-	Autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	1.3e-38
AXI06634.1|1981354_1981579_-	hypothetical protein	NA	NA	NA	NA	NA
AXI06635.1|1981699_1982248_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.7	9.3e-83
AXI06636.1|1982660_1982804_+	ComK-like	NA	NA	NA	NA	NA
AXI06637.1|1982790_1983234_-	Hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
AXI06638.1|1983529_1984165_+|protease	CAAX amino terminal protease family	protease	NA	NA	NA	NA
AXI06639.1|1984604_1985318_-	Transaldolase	NA	M1PR54	Cyanophage	35.3	9.4e-19
AXI06640.1|1985577_1985880_+	Hypothetical protein	NA	NA	NA	NA	NA
AXI06641.1|1986135_1986501_+	CrcB protein	NA	A0A2H4PQR0	Staphylococcus_phage	99.2	1.4e-58
AXI06642.1|1986497_1986851_+	CrcB protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
AXI06643.1|1987498_1987663_+	Mobile element protein	NA	A0A146ICT8	Staphylococcus_phage	98.1	2.9e-24
AXI06644.1|1988176_1988785_+	Transposase DDE domain	NA	A0ZS58	Staphylococcus_virus	96.5	1.3e-109
AXI06645.1|1988847_1989681_-	oxidoreductase of aldo/keto reductase family, subgroup 1	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
AXI06646.1|1989892_1990801_-	Hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
AXI06647.1|1990922_1992119_-	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
AXI06648.1|1992490_1994083_+	Phosphoenolpyruvate carboxykinase	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
AXI06649.1|1994460_1995231_-	Dipeptidyl aminopeptidase/acylaminoacyl-peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.5e-142
AXI06650.1|1995211_1995691_-	8-oxo-dGTPase Bsu YtkD / 8-oxo-GTPase Bsu YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	99.4	3.0e-85
AXI06651.1|1995750_1996008_+	Protein YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AXI06652.1|1996004_1997006_-	O-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
AXI06653.1|1997010_1998489_-	O-succinylbenzoic acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
AXI06654.1|1998647_1999088_-	lipoprotein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	2.6e-80
AXI06655.1|1999441_2000056_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	93.1	1.1e-42
AXI06656.1|2000136_2001132_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
AXI06657.1|2001206_2001833_+	Hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
AXI06658.1|2001873_2002215_+	DUF3969 domain-containing protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
AXI06659.1|2002315_2002888_+	Hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
AXI06660.1|2003085_2003655_-	Integrase core domain	NA	A0A2I7SC85	Paenibacillus_phage	56.8	1.3e-55
AXI06661.1|2003676_2003886_-	Mobile element protein	NA	A0A2H4PQV6	Staphylococcus_phage	91.2	4.7e-27
AXI06662.1|2004685_2005096_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
AXI06663.1|2005637_2006867_-	Type I restriction-modification system, specificity subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	6.8e-134
AXI06664.1|2006859_2008416_-	Type I restriction-modification system, DNA-methyltransferase subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	1.6e-289
AXI06665.1|2008776_2009496_-|protease	serine protease	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
AXI06666.1|2009653_2010373_-|protease	serine protease	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
AXI06667.1|2010493_2011213_-|protease	serine protease	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
AXI06668.1|2011270_2011993_-|protease	serine protease	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
AXI06669.1|2012117_2012825_-|protease	serine protease	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
AXI06670.1|2013787_2014369_+	putative beta-lactamase	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
AXI06671.1|2014841_2015060_-	BsaG protein	NA	A0A2H4PQH0	Staphylococcus_phage	80.6	2.0e-25
AXI06672.1|2015315_2015789_+	hypothetical protein	NA	NA	NA	NA	NA
AXI06673.1|2015793_2016585_+	hypothetical protein	NA	NA	NA	NA	NA
AXI06674.1|2016954_2017938_-	Leukotoxin LukD	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	5.2e-185
AXI06675.1|2017939_2018875_-	Leukotoxin LukE	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
>prophage 10
CP022582	Staphylococcus aureus strain FORC_062 chromosome, complete genome	2905353	2025076	2029323	2905353		Staphylococcus_phage(66.67%)	6	NA	NA
AXI06681.1|2025076_2025832_-	Enterotoxin, phage associated	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
AXI06682.1|2025870_2026266_-	Enterotoxin, phage associated	NA	A0A097PAT7	Streptococcus_pyogenes_phage	50.4	1.5e-26
AXI06683.1|2026240_2026642_-	Enterotoxin, phage associated	NA	A0A097PAT7	Streptococcus_pyogenes_phage	37.9	1.5e-10
AXI06684.1|2026795_2027524_-	Superantigen enterotoxin SEK	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
AXI06685.1|2027558_2028278_-	Superantigen enterotoxin SEK	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
AXI06686.1|2028558_2029323_-	Enterotoxin, phage associated	NA	A0A075M4C7	Staphylococcus_phage	36.9	3.2e-33
>prophage 11
CP022582	Staphylococcus aureus strain FORC_062 chromosome, complete genome	2905353	2160606	2177405	2905353	terminase,coat	Staphylococcus_phage(68.42%)	22	NA	NA
AXI06800.1|2160606_2161329_+	Superantigen enterotoxin SEL	NA	A0A1X9H080	Staphylococcus_phage	34.9	2.1e-26
AXI06801.1|2161497_2162298_-	Superantigen enterotoxin SEB	NA	A0A097PAT7	Streptococcus_pyogenes_phage	47.5	6.1e-51
AXI06802.1|2163084_2163645_+	Secreted protein Ear, superantigen-encoding pathogenicity islands SaPI	NA	Q4ZBG8	Staphylococcus_virus	68.1	5.4e-62
AXI06803.1|2164523_2165228_+	Toxic shock syndrome toxin 1 (TSST-1)	NA	NA	NA	NA	NA
AXI06804.1|2165382_2165952_-|terminase	Putative terminase, superantigen-encoding pathogenicity islands SaPI	terminase	Q4ZE85	Staphylococcus_phage	97.4	7.9e-101
AXI06805.1|2165948_2166290_-	pathogenicity island protein	NA	A0A1W6JQM3	Staphylococcus_phage	99.1	1.4e-57
AXI06806.1|2166292_2166820_-|coat	Spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	97.1	3.5e-87
AXI06807.1|2166870_2167089_-	Hypothetical protein	NA	NA	NA	NA	NA
AXI06808.1|2167106_2167685_-	Hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.9	4.8e-29
AXI06809.1|2167696_2168038_-	pathogenicity island protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
AXI06810.1|2168487_2169129_-	pathogenicity island protein	NA	Q4ZE67	Staphylococcus_phage	93.0	7.2e-111
AXI06811.1|2169125_2169506_-	pathogenicity island protein	NA	Q4ZE71	Staphylococcus_phage	96.8	1.7e-67
AXI06812.1|2169815_2171525_-	Putative DNA helicase, superantigen-encoding pathogenicity islands SaPI	NA	Q4ZE73	Staphylococcus_phage	92.8	1.4e-302
AXI06813.1|2171538_2172408_-	mobile element-associated protein	NA	Q4ZE74	Staphylococcus_phage	96.2	1.5e-164
AXI06814.1|2172472_2172799_-	DUF1474 domain-containing protein	NA	Q4ZE75	Staphylococcus_phage	89.8	1.5e-48
AXI06815.1|2172801_2173011_-	Hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	2.9e-29
AXI06816.1|2173003_2173150_-	Hypothetical protein	NA	NA	NA	NA	NA
AXI06817.1|2173146_2173464_-	excisionase	NA	A0A1W6JQE0	Staphylococcus_phage	98.1	9.2e-51
AXI06818.1|2173468_2173687_-	XRE family transcriptional regulator	NA	A0A2H4JB11	uncultured_Caudovirales_phage	66.7	1.3e-19
AXI06819.1|2173859_2174534_+	XRE family transcriptional regulator	NA	A0A2H4JGT9	uncultured_Caudovirales_phage	45.8	1.6e-39
AXI06820.1|2174547_2175720_+	Integrase, superantigen-encoding pathogenicity islands SaPI	NA	A0A1W6JQD3	Staphylococcus_phage	96.2	5.8e-215
AXI06821.1|2175788_2177405_-	Heat shock protein 60 family chaperone GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
