assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003351805.1_ASM335180v1	CP017235	Lactobacillus delbrueckii subsp. bulgaricus strain L99 chromosome, complete genome	1	41118-41274	1	CRISPRCasFinder	no		cas14j,cas3,Cas14u_CAS-V,DEDDh,cas9,cas1,DinG,csa3,c2c9_V-U4	Orphan	ATACTGAAAAATACAGAAAATGAAACTATTAAACAATTAGCAGCTGAAAAGCTAC	55	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,Cas14u_CAS-V,DEDDh,cas9,cas1,DinG,csa3,c2c9_V-U4	NA|57aa|up_5|CP017235.1_32954_33125_+,NA|42aa|up_2|CP017235.1_33968_34094_+,NA|191aa|up_0|CP017235.1_34826_35399_+,NA|71aa|down_3|CP017235.1_43255_43468_-,NA|201aa|down_4|CP017235.1_43454_44057_-,NA|255aa|down_5|CP017235.1_44411_45176_+,NA|261aa|down_6|CP017235.1_45172_45955_+	NA|186aa|up_9|CP017235.1_27834_28392_+	COG4720, COG4720, Predicted membrane protein [Function unknown]	NA|922aa|up_8|CP017235.1_28418_31184_-	pfam11907, DUF3427, Domain of unknown function (DUF3427)	NA|237aa|up_7|CP017235.1_31332_32043_+	pfam06161, DUF975, Protein of unknown function (DUF975)	NA|160aa|up_6|CP017235.1_32127_32607_+	pfam14317, YcxB, YcxB-like protein	NA|57aa|up_5|CP017235.1_32954_33125_+	NA	NA|76aa|up_4|CP017235.1_33264_33492_+	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|130aa|up_3|CP017235.1_33515_33905_+	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|42aa|up_2|CP017235.1_33968_34094_+	NA	NA|63aa|up_1|CP017235.1_34172_34361_+	PRK02220, PRK02220, 4-oxalocrotonate tautomerase; Provisional	NA|191aa|up_0|CP017235.1_34826_35399_+	NA	NA|42aa|down_0|CP017235.1_41469_41595_+	PRK13511, PRK13511, 6-phospho-beta-galactosidase; Provisional	NA|323aa|down_1|CP017235.1_41716_42685_+	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|68aa|down_2|CP017235.1_42724_42928_+	pfam00480, ROK, ROK family	NA|71aa|down_3|CP017235.1_43255_43468_-	NA	NA|201aa|down_4|CP017235.1_43454_44057_-	NA	NA|255aa|down_5|CP017235.1_44411_45176_+	NA	NA|261aa|down_6|CP017235.1_45172_45955_+	NA	NA|162aa|down_7|CP017235.1_46005_46491_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|227aa|down_8|CP017235.1_46918_47599_-	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]	NA|293aa|down_9|CP017235.1_48097_48976_+	TIGR03852, sucrose_gtfA, sucrose phosphorylase
GCA_003351805.1_ASM335180v1	CP017235	Lactobacillus delbrueckii subsp. bulgaricus strain L99 chromosome, complete genome	3	291894-291971	3	CRISPRCasFinder	no	cas3	cas14j,cas3,Cas14u_CAS-V,DEDDh,cas9,cas1,DinG,csa3,c2c9_V-U4	Unclear	AAGTGTTTTCTTATCTCATACTTT	24	1	1	291918-291947	CP017235.1_291864-291893	NA	1	1	Unclear	cas14j,cas3,Cas14u_CAS-V,DEDDh,cas9,cas1,DinG,csa3,c2c9_V-U4	NA,NA	NA|126aa|up_9|CP017235.1_282078_282456_+	pfam09148, DUF1934, Domain of unknown function (DUF1934)	NA|190aa|up_8|CP017235.1_282501_283071_+	TIGR04567, DNA-directed_RNA_polymerase_subunit_delta, DNA-directed RNA polymerase delta subunit	NA|540aa|up_7|CP017235.1_283187_284807_+	PRK05380, pyrG, CTP synthetase; Validated	NA|424aa|up_6|CP017235.1_284926_286198_+	PRK12830, PRK12830, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed	NA|84aa|up_5|CP017235.1_286297_286549_+	PRK01678, rpmE2, type B 50S ribosomal protein L31	NA|456aa|up_4|CP017235.1_286656_288024_+	COG0770, MurF, UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]	NA|484aa|up_3|CP017235.1_288033_289485_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|138aa|up_2|CP017235.1_289569_289983_+	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional	NA|377aa|up_1|CP017235.1_289979_291110_+	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|233aa|up_0|CP017235.1_291163_291862_-	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily	NA|186aa|down_0|CP017235.1_292085_292643_+	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	cas3|1159aa|down_1|CP017235.1_292659_296136_+	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]	NA|81aa|down_2|CP017235.1_296204_296447_+	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|127aa|down_3|CP017235.1_296512_296893_+	COG2919, COG2919, Septum formation initiator [Cell division and chromosome partitioning]	NA|118aa|down_4|CP017235.1_296892_297246_+	cd04471, S1_RNase_R, S1_RNase_R: RNase R C-terminal S1 domain	NA|432aa|down_5|CP017235.1_297292_298588_+	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]	NA|723aa|down_6|CP017235.1_298715_300884_+	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|294aa|down_7|CP017235.1_300928_301810_+	PRK00114, hslO, Hsp33 family molecular chaperone HslO	NA|552aa|down_8|CP017235.1_302294_303950_+	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|429aa|down_9|CP017235.1_303930_305217_+	PRK13381, PRK13381, peptidase T; Provisional
GCA_003351805.1_ASM335180v1	CP017235	Lactobacillus delbrueckii subsp. bulgaricus strain L99 chromosome, complete genome	5	745498-748505	1,5,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1	cas14j,cas3,Cas14u_CAS-V,DEDDh,cas9,cas1,DinG,csa3,c2c9_V-U4	Type II-A,Type II-C,Type II-B, Type II-B, or Type II-C?	GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC,GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC,GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	36,36,36	0	0	NA	NA	NA:NA:NA	45,45,45	45	TypeII-A,TypeII-C,TypeII-B,TypeII-B,orTypeII-C?	cas14j,cas3,Cas14u_CAS-V,DEDDh,cas9,cas1,DinG,csa3,c2c9_V-U4	NA|134aa|up_8|CP017235.1_732364_732766_+,NA|92aa|up_7|CP017235.1_732782_733058_+,NA	NA|812aa|up_9|CP017235.1_729906_732342_+	pfam02841, GBP_C, Guanylate-binding protein, C-terminal domain	NA|134aa|up_8|CP017235.1_732364_732766_+	NA	NA|92aa|up_7|CP017235.1_732782_733058_+	NA	NA|432aa|up_6|CP017235.1_733039_734335_+	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|149aa|up_5|CP017235.1_735781_736228_+	COG3976, COG3976, Uncharacterized protein conserved in bacteria [Function unknown]	NA|205aa|up_4|CP017235.1_736428_737043_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|223aa|up_3|CP017235.1_737039_737708_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|420aa|up_2|CP017235.1_737710_738970_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	cas9|1421aa|up_1|CP017235.1_739125_743388_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|304aa|up_0|CP017235.1_743606_744518_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	NA|367aa|down_0|CP017235.1_748861_749962_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|409aa|down_1|CP017235.1_749964_751191_+	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR)	NA|388aa|down_2|CP017235.1_751194_752358_+	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade	NA|434aa|down_3|CP017235.1_752579_753881_+	pfam06738, ThrE, Putative threonine/serine exporter	NA|169aa|down_4|CP017235.1_753938_754445_-	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|315aa|down_5|CP017235.1_754546_755491_+	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase	NA|754aa|down_6|CP017235.1_755631_757893_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|146aa|down_7|CP017235.1_757921_758359_+	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional	NA|429aa|down_8|CP017235.1_758641_759928_+	TIGR00442, hisS, histidyl-tRNA synthetase	NA|615aa|down_9|CP017235.1_759943_761788_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated
GCA_003351805.1_ASM335180v1	CP017235	Lactobacillus delbrueckii subsp. bulgaricus strain L99 chromosome, complete genome	6	1748069-1748171	6	CRISPRCasFinder	no		cas14j,cas3,Cas14u_CAS-V,DEDDh,cas9,cas1,DinG,csa3,c2c9_V-U4	Orphan	GTTGGCGTAGGGGAGTGAGAACGATGAAGATCGAT	35	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,Cas14u_CAS-V,DEDDh,cas9,cas1,DinG,csa3,c2c9_V-U4	NA|305aa|up_7|CP017235.1_1742257_1743172_+,NA|80aa|up_6|CP017235.1_1743230_1743470_-,NA	NA|468aa|up_9|CP017235.1_1739413_1740817_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|77aa|up_8|CP017235.1_1741262_1741493_-	PRK10811, rne, ribonuclease E; Reviewed	NA|305aa|up_7|CP017235.1_1742257_1743172_+	NA	NA|80aa|up_6|CP017235.1_1743230_1743470_-	NA	NA|167aa|up_5|CP017235.1_1743565_1744066_-	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family	NA|261aa|up_4|CP017235.1_1744065_1744848_-	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|253aa|up_3|CP017235.1_1744959_1745718_-	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|244aa|up_2|CP017235.1_1745751_1746483_-	PRK00047, glpK, glycerol kinase GlpK	NA|132aa|up_1|CP017235.1_1746443_1746839_-	PRK00047, glpK, glycerol kinase GlpK	NA|223aa|up_0|CP017235.1_1747298_1747967_+	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|697aa|down_0|CP017235.1_1748519_1750610_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|198aa|down_1|CP017235.1_1750950_1751544_+	COG2199, COG2199, c-di-GMP synthetase (diguanylate cyclase, GGDEF domain) [Signal    transduction mechanisms]	NA|163aa|down_2|CP017235.1_1751632_1752121_-	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein	NA|300aa|down_3|CP017235.1_1752096_1752996_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|1063aa|down_4|CP017235.1_1754245_1757434_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|362aa|down_5|CP017235.1_1757426_1758512_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|426aa|down_6|CP017235.1_1758511_1759789_-	PRK09357, pyrC, dihydroorotase; Validated	NA|319aa|down_7|CP017235.1_1759788_1760745_-	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|181aa|down_8|CP017235.1_1760889_1761432_-	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA|308aa|down_9|CP017235.1_1761589_1762513_-	PRK07259, PRK07259, dihydroorotate dehydrogenase
