The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031229	Ornithinimicrobium sp. AMA3305 chromosome, complete genome	3918911	1543168	1605748	3918911	protease,transposase,tRNA	Tupanvirus(20.0%)	58	NA	NA
AXH95898.1|1543168_1545886_+|tRNA	valine--tRNA ligase	tRNA	A0A2K9KZB8	Tupanvirus	35.4	1.8e-150
AXH95899.1|1545896_1546643_+	DUF4129 domain-containing protein	NA	NA	NA	NA	NA
AXH95900.1|1546639_1547218_+	hypothetical protein	NA	NA	NA	NA	NA
AXH95901.1|1547214_1548222_+	MoxR family ATPase	NA	NA	NA	NA	NA
AXH95902.1|1548247_1549618_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AXH95903.1|1549614_1550145_+	hypothetical protein	NA	NA	NA	NA	NA
AXH95904.1|1550141_1550882_-	hypothetical protein	NA	NA	NA	NA	NA
AXH95905.1|1550874_1551795_-	hypothetical protein	NA	NA	NA	NA	NA
AXH95906.1|1552169_1552895_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.0	1.4e-17
AXH95907.1|1552934_1553168_-	hypothetical protein	NA	NA	NA	NA	NA
AXH95908.1|1553391_1554666_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	61.1	4.4e-144
AXH95909.1|1554795_1555197_-	hypothetical protein	NA	NA	NA	NA	NA
AXH95910.1|1555277_1555895_+	WHG domain-containing protein	NA	NA	NA	NA	NA
AXH95911.1|1555931_1556615_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	47.7	4.9e-41
AXH97983.1|1556645_1557227_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	51.1	7.6e-43
AXH95912.1|1557431_1558391_+	DMT family transporter	NA	NA	NA	NA	NA
AXH95913.1|1558544_1559954_-	trigger factor	NA	NA	NA	NA	NA
AXH95914.1|1560309_1560921_+	DUF541 domain-containing protein	NA	NA	NA	NA	NA
AXH95915.1|1561029_1561332_+	antitoxin	NA	NA	NA	NA	NA
AXH95916.1|1561387_1562593_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AXH95917.1|1562649_1564023_-	magnesium transporter	NA	NA	NA	NA	NA
AXH95918.1|1564019_1564493_-	ribose-5-phosphate isomerase	NA	NA	NA	NA	NA
AXH95919.1|1564492_1565134_-	disulfide bond formation protein DsbA	NA	NA	NA	NA	NA
AXH95920.1|1565183_1567760_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	27.3	7.6e-42
AXH95921.1|1567864_1568245_-	hypothetical protein	NA	NA	NA	NA	NA
AXH95922.1|1568254_1570378_-	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
AXH95923.1|1570528_1571428_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AXH95924.1|1571475_1573809_+	hypothetical protein	NA	NA	NA	NA	NA
AXH95925.1|1573825_1574236_+	globin	NA	NA	NA	NA	NA
AXH97984.1|1574288_1575980_+	alpha-amylase	NA	NA	NA	NA	NA
AXH95926.1|1576050_1577358_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
AXH95927.1|1578828_1579431_+	hypothetical protein	NA	NA	NA	NA	NA
AXH97985.1|1579472_1579985_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AXH95928.1|1579997_1580654_-	hypothetical protein	NA	NA	NA	NA	NA
AXH97986.1|1580650_1581139_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AXH95929.1|1581220_1582195_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
AXH95930.1|1582170_1584039_-	glycoside hydrolase family 15 protein	NA	NA	NA	NA	NA
AXH95931.1|1584238_1584523_-	hypothetical protein	NA	NA	NA	NA	NA
AXH95932.1|1584563_1584767_+	hypothetical protein	NA	NA	NA	NA	NA
AXH95933.1|1584781_1585672_-	pseudouridine synthase	NA	NA	NA	NA	NA
AXH95934.1|1585744_1587427_-	energy-dependent translational throttle protein EttA	NA	A0A2K9L3Z8	Tupanvirus	29.5	2.6e-43
AXH95935.1|1587555_1588119_-	single-stranded DNA-binding protein	NA	A6N1Y1	Microbacterium_phage	27.3	2.7e-05
AXH95936.1|1588279_1588573_-	hypothetical protein	NA	NA	NA	NA	NA
AXH95937.1|1588678_1590313_-	ABC transporter	NA	NA	NA	NA	NA
AXH95938.1|1590309_1592010_-	ABC transporter	NA	NA	NA	NA	NA
AXH95939.1|1592080_1593202_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
AXH95940.1|1593742_1594423_-	hypothetical protein	NA	NA	NA	NA	NA
AXH95941.1|1595519_1595750_+	hypothetical protein	NA	NA	NA	NA	NA
AXH97987.1|1596063_1597345_+|transposase	IS3 family transposase	transposase	H6WZH1	Escherichia_phage	47.3	1.6e-53
AXH95942.1|1597311_1598373_+	divalent metal cation transporter	NA	NA	NA	NA	NA
AXH95943.1|1598399_1599071_+	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
AXH95944.1|1599123_1599558_+	NAD(+)--rifampin ADP-ribosyltransferase	NA	NA	NA	NA	NA
AXH95945.1|1599607_1600855_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
AXH95946.1|1600881_1601505_+	oligoribonuclease	NA	A0A1B3B0T8	Gordonia_phage	32.6	9.1e-18
AXH95947.1|1601556_1602264_+	PAP2 family protein	NA	NA	NA	NA	NA
AXH95948.1|1602361_1603219_+	NmrA/HSCARG family protein	NA	NA	NA	NA	NA
AXH95949.1|1604229_1604874_+	DUF1211 domain-containing protein	NA	NA	NA	NA	NA
AXH95950.1|1605445_1605748_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
CP031229	Ornithinimicrobium sp. AMA3305 chromosome, complete genome	3918911	2419701	2475858	3918911	transposase,integrase	Gordonia_phage(40.0%)	52	2432495:2432515	2458280:2458300
AXH96588.1|2419701_2420625_+|integrase	integrase	integrase	A0A2K9VH72	Gordonia_phage	36.5	9.6e-40
AXH96589.1|2421678_2422113_-	hypothetical protein	NA	NA	NA	NA	NA
AXH96590.1|2423152_2423416_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A088F8T3	Mycobacterium_phage	41.2	9.8e-14
AXH96591.1|2423412_2423676_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
AXH96592.1|2423867_2424473_-	hypothetical protein	NA	NA	NA	NA	NA
AXH96593.1|2424656_2425580_+|integrase	integrase	integrase	A0A2K9VH72	Gordonia_phage	36.8	7.4e-40
AXH96594.1|2425626_2426295_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AXH96595.1|2426291_2427503_-	sensor histidine kinase	NA	NA	NA	NA	NA
AXH96596.1|2427658_2428372_+	hypothetical protein	NA	NA	NA	NA	NA
AXH98061.1|2428609_2428807_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96597.1|2428790_2429129_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA	NA
AXH98062.1|2429296_2429524_-	DUF3024 domain-containing protein	NA	NA	NA	NA	NA
AXH96598.1|2429552_2430137_-	hypothetical protein	NA	NA	NA	NA	NA
2432495:2432515	attL	AGGTCGCCGCAGGAGGCGACC	NA	NA	NA	NA
AXH96599.1|2433606_2433984_-	VOC family protein	NA	NA	NA	NA	NA
AXH96600.1|2435460_2435811_+	glyoxalase	NA	NA	NA	NA	NA
AXH96601.1|2435995_2437531_-	methylmalonyl-CoA mutase	NA	NA	NA	NA	NA
AXH96602.1|2437527_2439069_-	AMP-dependent synthetase	NA	A0A2H4PQM9	Staphylococcus_phage	28.0	4.8e-28
AXH98063.1|2439073_2441146_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
AXH96603.1|2441142_2443500_-	bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase	NA	NA	NA	NA	NA
AXH96604.1|2443588_2444359_+	SDR family NAD(P)-dependent oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.2	1.6e-16
AXH96605.1|2444475_2445186_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96606.1|2445182_2445671_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96607.1|2445694_2446114_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96608.1|2446340_2447129_+	DsbA family oxidoreductase	NA	NA	NA	NA	NA
AXH96609.1|2447259_2447673_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AXH96610.1|2447669_2449355_-	2-aminobenzoate-CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	29.7	3.5e-48
AXH96611.1|2449509_2450292_+	PaaX family transcriptional regulator	NA	NA	NA	NA	NA
AXH96612.1|2450395_2451499_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
AXH98064.1|2451646_2452117_-	hypothetical protein	NA	NA	NA	NA	NA
AXH96613.1|2452232_2452469_+	hypothetical protein	NA	NA	NA	NA	NA
AXH98065.1|2452482_2452725_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96614.1|2452788_2453022_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96615.1|2453024_2453345_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA	NA
AXH96616.1|2453572_2454337_-	hypothetical protein	NA	NA	NA	NA	NA
AXH96617.1|2454445_2454880_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96618.1|2456007_2457093_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AXH96619.1|2457355_2458279_-|integrase	integrase	integrase	A0A2K9VH72	Gordonia_phage	36.5	2.1e-39
AXH96620.1|2458462_2459068_+	hypothetical protein	NA	NA	NA	NA	NA
2458280:2458300	attR	GGTCGCCTCCTGCGGCGACCT	NA	NA	NA	NA
AXH96621.1|2459259_2459523_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
AXH96622.1|2459519_2459783_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A088F8T3	Mycobacterium_phage	41.2	9.8e-14
AXH96623.1|2459888_2461454_+|transposase	IS1380 family transposase	transposase	A0A222ZN33	Mycobacterium_phage	37.7	2.1e-63
AXH96624.1|2462249_2463683_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96625.1|2463774_2463966_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96626.1|2464087_2466370_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96627.1|2466366_2467287_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96628.1|2467283_2468870_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96629.1|2469001_2470090_-	hypothetical protein	NA	A0A2K9VH72	Gordonia_phage	33.7	8.4e-27
AXH96630.1|2470067_2470334_+	hypothetical protein	NA	NA	NA	NA	NA
AXH96631.1|2470335_2471214_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA	NA
AXH96632.1|2471149_2472259_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
AXH96633.1|2472415_2472619_-	hypothetical protein	NA	NA	NA	NA	NA
AXH98066.1|2474805_2475858_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP031229	Ornithinimicrobium sp. AMA3305 chromosome, complete genome	3918911	3404866	3444219	3918911	transposase,tRNA,integrase	Mycobacterium_phage(28.57%)	35	3398131:3398150	3444046:3444065
3398131:3398150	attL	CGCGTGCGCGACCGTCCCGG	NA	NA	NA	NA
AXH97353.1|3404866_3405388_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AXH97354.1|3405397_3405979_+	low molecular weight phosphatase family protein	NA	NA	NA	NA	NA
AXH97355.1|3406192_3407686_+	sugar transferase	NA	NA	NA	NA	NA
AXH97356.1|3407765_3408725_+	prephenate dehydratase	NA	NA	NA	NA	NA
AXH97357.1|3408738_3409407_-	G-D-S-L family lipolytic protein	NA	NA	NA	NA	NA
AXH98170.1|3409642_3410737_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXH97358.1|3411059_3411533_+	hypothetical protein	NA	NA	NA	NA	NA
AXH97359.1|3411529_3412153_+	hypothetical protein	NA	NA	NA	NA	NA
AXH97360.1|3412785_3413244_-	CrcB family protein	NA	NA	NA	NA	NA
AXH97361.1|3413240_3413744_-	universal stress protein	NA	NA	NA	NA	NA
AXH97362.1|3413777_3414863_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	Q6GZ03	Mycoplasma_phage	30.1	9.9e-20
AXH97363.1|3415106_3416450_+	maltose ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH97364.1|3416610_3418281_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
AXH97365.1|3418283_3419237_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AXH98171.1|3419236_3420277_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	31.5	2.0e-25
AXH97366.1|3420230_3421028_-	trehalose-phosphatase	NA	NA	NA	NA	NA
AXH97367.1|3421043_3422522_-	trehalose-6-phosphate synthase	NA	NA	NA	NA	NA
AXH97368.1|3422520_3424440_+	serine/threonine protein kinase	NA	A0A291ATY9	Pandoravirus	31.5	6.5e-14
AXH97369.1|3424589_3425732_+	hypothetical protein	NA	A0A1I9SA30	Rhodococcus_phage	50.9	7.7e-23
AXH97370.1|3426016_3427156_+|integrase	site-specific integrase	integrase	A0A1C9LZ20	Mycobacterium_phage	42.5	5.6e-74
AXH98172.1|3427878_3428469_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXH97371.1|3428525_3429233_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
AXH98173.1|3430460_3432125_-|integrase	integrase	integrase	NA	NA	NA	NA
AXH97372.1|3432325_3433348_-|integrase	integrase	integrase	NA	NA	NA	NA
AXH97373.1|3433433_3433745_-|transposase	transposase	transposase	NA	NA	NA	NA
AXH97374.1|3434117_3434999_+	ATP-binding protein	NA	NA	NA	NA	NA
AXH97375.1|3435078_3435426_+	hypothetical protein	NA	NA	NA	NA	NA
AXH97376.1|3436118_3436751_-	hypothetical protein	NA	NA	NA	NA	NA
AXH97377.1|3436840_3437074_+	hypothetical protein	NA	NA	NA	NA	NA
AXH97378.1|3437800_3438262_-	hypothetical protein	NA	NA	NA	NA	NA
AXH97379.1|3438478_3438877_+	hypothetical protein	NA	NA	NA	NA	NA
AXH97380.1|3439700_3439946_+	hypothetical protein	NA	NA	NA	NA	NA
AXH97381.1|3440770_3441049_+	hypothetical protein	NA	NA	NA	NA	NA
AXH98174.1|3441285_3442568_-|transposase	IS3 family transposase	transposase	H6WZH1	Escherichia_phage	41.9	2.1e-53
AXH97382.1|3442656_3444219_-|transposase	IS1380 family transposase	transposase	A0A222ZN33	Mycobacterium_phage	37.7	2.0e-61
3444046:3444065	attR	CGCGTGCGCGACCGTCCCGG	NA	NA	NA	NA
