The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP022377	Francisella sp. PA05-1188 chromosome, complete genome	1839233	79849	89991	1839233	tRNA	Staphylococcus_phage(28.57%)	9	NA	NA
AXH32448.1|79849_81634_+	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	41.9	2.1e-22
AXH32449.1|81581_82730_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
AXH32450.1|83770_84295_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.2	1.4e-16
AXH32451.1|84291_84735_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	45.7	4.9e-26
AXH32452.1|84744_85956_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	45.9	2.1e-90
AXH32453.1|85948_86554_-	riboflavin synthase	NA	A0A1V0SE20	Indivirus	36.2	6.8e-18
AXH32454.1|86546_87614_-	riboflavin biosynthesis protein RibD	NA	A0A1V0SE20	Indivirus	35.1	1.5e-49
AXH32455.1|88625_88982_-	ferredoxin	NA	NA	NA	NA	NA
AXH32456.1|89067_89991_+	S49 family peptidase	NA	F8QZT1	Wolbachia_phage	22.6	1.2e-13
>prophage 3
CP022377	Francisella sp. PA05-1188 chromosome, complete genome	1839233	662863	728209	1839233	tRNA,transposase	Tupanvirus(11.76%)	60	NA	NA
AXH32957.1|662863_664768_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.2	9.0e-125
AXH32958.1|664774_665311_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.7	2.6e-13
AXH32959.1|665354_665552_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
AXH32960.1|665587_665944_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
AXH32961.1|665980_666697_+	DedA family protein	NA	NA	NA	NA	NA
AXH32962.1|666721_667396_-	ribose 5-phosphate isomerase A	NA	NA	NA	NA	NA
AXH32963.1|667397_668768_-	hypothetical protein	NA	NA	NA	NA	NA
AXH32964.1|668781_669174_-	hypothetical protein	NA	NA	NA	NA	NA
AXH32965.1|669184_671068_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AXH32966.1|672101_673007_+	hypothetical protein	NA	NA	NA	NA	NA
AXH32967.1|673022_673934_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXH32968.1|674041_674764_+	NAD(P)-dependent oxidoreductase	NA	W8CYX9	Bacillus_phage	40.0	9.3e-06
AXH32969.1|675075_676524_+	exodeoxyribonuclease I	NA	NA	NA	NA	NA
AXH32970.1|676557_677949_-	DUF1016 domain-containing protein	NA	Q9JMP5	Wolbachia_phage	60.4	3.4e-49
AXH32971.1|678600_679008_+	DUF1398 domain-containing protein	NA	NA	NA	NA	NA
AXH32972.1|679379_681392_+	excinuclease ABC subunit B	NA	NA	NA	NA	NA
AXH32973.1|681430_682228_+	hypothetical protein	NA	NA	NA	NA	NA
AXH32974.1|682227_683025_+	glutamate racemase	NA	NA	NA	NA	NA
AXH32975.1|683116_684394_+	MFS transporter	NA	NA	NA	NA	NA
AXH32976.1|684997_686275_+	hypothetical protein	NA	NA	NA	NA	NA
AXH32977.1|686314_686494_+	hypothetical protein	NA	NA	NA	NA	NA
AXH32978.1|686477_686660_+	hypothetical protein	NA	NA	NA	NA	NA
AXH32979.1|686872_688327_+	circularly permuted type 2 ATP-grasp protein	NA	NA	NA	NA	NA
AXH32980.1|688326_689313_+	hypothetical protein	NA	NA	NA	NA	NA
AXH32981.1|689330_691082_+	transglutaminase	NA	NA	NA	NA	NA
AXH32982.1|691128_692298_-	amidohydrolase	NA	NA	NA	NA	NA
AXH32983.1|692539_692782_+	hypothetical protein	NA	NA	NA	NA	NA
AXH32984.1|692928_694314_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SGL7	Hokovirus	23.8	4.5e-09
AXH32985.1|694297_694498_+	hypothetical protein	NA	NA	NA	NA	NA
AXH32986.1|694596_695868_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	28.7	2.7e-40
AXH32987.1|695871_696627_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	46.3	1.5e-62
AXH32988.1|696627_697101_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	45.4	1.5e-25
AXH32989.1|697175_697607_+	ubiquinone-binding protein	NA	NA	NA	NA	NA
AXH32990.1|697606_697912_+	RnfH family protein	NA	NA	NA	NA	NA
AXH32991.1|697901_698480_+|transposase	transposase	transposase	NA	NA	NA	NA
AXH32992.1|698472_699681_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AXH32993.1|699757_700678_+	ABC transporter	NA	NA	NA	NA	NA
AXH32994.1|700793_702539_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AXH33984.1|702557_703313_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXH32995.1|703482_705300_-	translational GTPase TypA	NA	A0A2K9L2P9	Tupanvirus	34.9	3.2e-23
AXH32996.1|705706_706456_-|transposase	IS5/IS1182 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	44.2	2.1e-21
AXH32997.1|706588_707287_+	hypothetical protein	NA	NA	NA	NA	NA
AXH32998.1|707502_708375_-	1-aminocyclopropane-1-carboxylate deaminase	NA	NA	NA	NA	NA
AXH32999.1|708383_708554_-	rubredoxin	NA	NA	NA	NA	NA
AXH33000.1|708640_709258_-	hypothetical protein	NA	NA	NA	NA	NA
AXH33001.1|709363_710758_+	hypothetical protein	NA	A0A075BSJ0	Microcystis_phage	31.3	7.0e-42
AXH33002.1|711020_712301_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
AXH33003.1|712498_713527_+	SIS domain-containing protein	NA	A0A0N9Q9E4	Chrysochromulina_ericina_virus	29.7	8.5e-21
AXH33004.1|713560_714913_+	MFS transporter	NA	NA	NA	NA	NA
AXH33005.1|715001_715712_+	phosphatase PAP2 family protein	NA	R4TQ27	Phaeocystis_globosa_virus	25.0	3.5e-05
AXH33006.1|715708_716455_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
AXH33985.1|716553_717759_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	NA	NA	NA	NA	NA
AXH33007.1|717773_718481_+	laccase domain-containing protein	NA	NA	NA	NA	NA
AXH33008.1|718499_720293_+	peptidase M24 family protein	NA	A0A0P0I8D7	Acinetobacter_phage	36.7	6.1e-99
AXH33009.1|720400_721465_+	DNA/RNA non-specific endonuclease	NA	A0A2H4N7Z3	Lake_Baikal_phage	39.0	1.7e-35
AXH33010.1|721824_722574_-|transposase	IS5/IS1182 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	43.3	1.1e-20
AXH33011.1|722648_723197_+|transposase	IS6 family transposase	transposase	A0A1X9I6E7	Streptococcus_phage	33.5	1.2e-18
AXH33012.1|723655_725923_+	hypothetical protein	NA	NA	NA	NA	NA
AXH33013.1|727408_727762_-|transposase	IS6 family transposase	transposase	NA	NA	NA	NA
AXH33014.1|727852_728209_-|transposase	IS6 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP022377	Francisella sp. PA05-1188 chromosome, complete genome	1839233	1426147	1436518	1839233	transposase	Prochlorococcus_phage(28.57%)	9	NA	NA
AXH33612.1|1426147_1428157_+	peptidase M3	NA	A0A1V0SID3	Klosneuvirus	26.1	7.4e-53
AXH33613.1|1428252_1428606_+	YraN family protein	NA	NA	NA	NA	NA
AXH33614.1|1428666_1429764_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AXH33615.1|1429766_1430258_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	41.2	2.6e-20
AXH33616.1|1430363_1430948_-	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	37.1	1.1e-20
AXH33617.1|1430951_1433264_-	phosphoribosylamine--glycine ligase	NA	A0A0M4JBD3	Mollivirus	29.8	3.6e-27
AXH33618.1|1433263_1434307_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	40.0	3.7e-56
AXH33619.1|1434638_1435586_+|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	45.8	9.5e-59
AXH33620.1|1435669_1436518_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	38.0	3.1e-29
>prophage 5
CP022377	Francisella sp. PA05-1188 chromosome, complete genome	1839233	1808953	1830882	1839233	transposase	Shigella_phage(33.33%)	18	NA	NA
AXH33936.1|1808953_1809703_-|transposase	IS5/IS1182 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	44.2	2.1e-21
AXH33937.1|1809880_1811302_-	hypothetical protein	NA	NA	NA	NA	NA
AXH33938.1|1811990_1812632_+	hypothetical protein	NA	NA	NA	NA	NA
AXH33939.1|1812679_1812892_+	hypothetical protein	NA	NA	NA	NA	NA
AXH33940.1|1812930_1813680_-	hypothetical protein	NA	U5P429	Shigella_phage	36.7	1.2e-19
AXH33941.1|1813748_1814711_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
AXH33942.1|1814770_1815274_-|transposase	transposase	transposase	NA	NA	NA	NA
AXH33943.1|1815632_1817264_+	hypothetical protein	NA	NA	NA	NA	NA
AXH33944.1|1817363_1818155_+	hypothetical protein	NA	NA	NA	NA	NA
AXH33945.1|1818253_1818820_+	hypothetical protein	NA	NA	NA	NA	NA
AXH33946.1|1819498_1820446_-|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	45.5	1.0e-57
AXH33947.1|1821215_1822586_-	hypothetical protein	NA	NA	NA	NA	NA
AXH33948.1|1823030_1823783_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AXH33949.1|1823795_1824536_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AXH33950.1|1824543_1825263_-	EEP domain-containing protein	NA	NA	NA	NA	NA
AXH33951.1|1825994_1827153_-|transposase	IS3 family transposase	transposase	Q716C2	Shigella_phage	29.4	2.3e-22
AXH33952.1|1827980_1829240_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	29.4	9.1e-41
AXH33953.1|1829934_1830882_+|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	45.8	9.5e-59
