The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP024934	Paraburkholderia graminis strain PHS1 chromosome PHS1_A, complete sequence	4031601	595740	604812	4031601		Hokovirus(16.67%)	7	NA	NA
AXF06925.1|595740_597699_+	molecular chaperone DnaK	NA	A0A1V0SH73	Hokovirus	50.3	2.8e-145
AXF06926.1|597968_599108_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	41.0	2.8e-25
AXF09692.1|599133_601026_+	aminodeoxychorismate synthase, component I	NA	S4VNU7	Pandoravirus	34.6	2.9e-51
AXF06927.1|601072_601888_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	29.2	2.2e-35
AXF06928.1|601921_602602_-	deoxynucleoside kinase	NA	A0A0C5K8U0	Enterococcus_phage	29.3	4.3e-05
AXF06929.1|602598_603132_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AXF06930.1|603210_604812_-	polynucleotide adenylyltransferase PcnB	NA	A0A172Q0J1	Acinetobacter_phage	30.6	2.6e-16
>prophage 2
CP024934	Paraburkholderia graminis strain PHS1 chromosome PHS1_A, complete sequence	4031601	758439	766580	4031601		Escherichia_phage(28.57%)	8	NA	NA
AXF07050.1|758439_759351_+	GDP-mannose 4,6 dehydratase	NA	E5ES47	Bathycoccus_sp._RCC1105_virus	25.9	7.8e-10
AXF07051.1|759779_760841_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	47.6	6.6e-85
AXF07052.1|760851_761745_+	glucose-1-phosphate thymidylyltransferase	NA	A0A291LA53	Escherichia_phage	58.1	1.6e-95
AXF07053.1|761729_762281_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.6	3.6e-50
AXF07054.1|762292_763219_+	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	35.2	9.0e-30
AXF07055.1|763557_764976_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.6	4.6e-57
AXF07056.1|764977_765799_+	ABC transporter permease	NA	NA	NA	NA	NA
AXF07057.1|765803_766580_+	sugar ABC transporter ATP-binding protein	NA	M1I0C3	Paramecium_bursaria_Chlorella_virus	28.2	6.9e-07
>prophage 3
CP024934	Paraburkholderia graminis strain PHS1 chromosome PHS1_A, complete sequence	4031601	3193728	3207418	4031601	protease	Methanothermobacter_phage(11.11%)	13	NA	NA
AXF08930.1|3193728_3194943_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	34.0	4.2e-43
AXF08931.1|3195007_3196027_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
AXF08932.1|3196044_3196491_+	dUTP diphosphatase	NA	Q2NP83	Xanthomonas_phage	62.3	2.5e-46
AXF08933.1|3196586_3198884_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.6	9.4e-169
AXF08934.1|3198880_3199195_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A218MMY6	uncultured_virus	44.6	5.8e-13
AXF08935.1|3199743_3199950_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	81.8	2.4e-23
AXF08936.1|3200115_3200949_-	hypothetical protein	NA	A0A0P0YN93	Yellowstone_lake_phycodnavirus	35.6	2.1e-30
AXF08937.1|3201082_3201388_-	DUF1330 domain-containing protein	NA	NA	NA	NA	NA
AXF08938.1|3201624_3202881_-	isocitrate dehydrogenase (NADP(+))	NA	Q77Z09	Phage_21	64.8	1.2e-11
AXF08939.1|3203220_3203790_+	pseudouridine synthase	NA	NA	NA	NA	NA
AXF08940.1|3204176_3204371_+	hypothetical protein	NA	NA	NA	NA	NA
AXF08941.1|3204515_3205046_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	41.2	2.0e-13
AXF08942.1|3205312_3207418_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	26.6	5.0e-60
>prophage 4
CP024934	Paraburkholderia graminis strain PHS1 chromosome PHS1_A, complete sequence	4031601	3882780	3956250	4031601	capsid,tail,integrase,tRNA,terminase,portal,head,plate	Burkholderia_phage(78.57%)	68	3878007:3878025	3913729:3913747
3878007:3878025	attL	AACTGTATTTTCACTGTAC	NA	NA	NA	NA
AXF09522.1|3882780_3883836_+	hypothetical protein	NA	A0A0M4RT01	Citrobacter_phage	24.3	3.0e-05
AXF09523.1|3884595_3885642_-|portal	phage portal protein	portal	E5FFI9	Burkholderia_phage	93.3	2.9e-186
AXF09524.1|3885641_3887417_-|terminase	terminase	terminase	E5FFI8	Burkholderia_phage	94.3	0.0e+00
AXF09525.1|3887568_3888603_+	hypothetical protein	NA	E5FFI7	Burkholderia_phage	82.1	6.5e-146
AXF09526.1|3888645_3889662_+|capsid	phage major capsid protein, P2 family	capsid	E5FFI6	Burkholderia_phage	90.8	2.5e-174
AXF09527.1|3889676_3890363_+|terminase	terminase	terminase	E5FFI5	Burkholderia_phage	91.2	2.3e-107
AXF09528.1|3890465_3890957_+|head	phage head protein	head	E5FFI4	Burkholderia_phage	92.0	5.2e-77
AXF09529.1|3890956_3891163_+|tail	phage tail protein	tail	E5FFI3	Burkholderia_phage	92.6	7.6e-30
AXF09530.1|3891178_3891520_+	hypothetical protein	NA	E5FFI2	Burkholderia_phage	97.3	2.2e-50
AXF09531.1|3891522_3891789_+	hypothetical protein	NA	E5FFI1	Burkholderia_phage	90.9	1.6e-35
AXF09532.1|3891785_3892592_+	peptidoglycan-binding protein	NA	E5FFI0	Burkholderia_phage	89.9	2.6e-134
AXF09533.1|3892588_3893041_+	hypothetical protein	NA	E5FFH9	Burkholderia_phage	76.7	5.3e-52
AXF09534.1|3893157_3893601_+|tail	phage tail protein	tail	E5FFH7	Burkholderia_phage	92.5	4.3e-70
AXF09535.1|3893597_3894056_+	phage virion morphogenesis protein	NA	E5FFH6	Burkholderia_phage	94.1	6.6e-74
AXF09536.1|3894140_3894800_+|plate	phage baseplate assembly protein V	plate	E5FFH5	Burkholderia_phage	79.4	4.2e-82
AXF09537.1|3894796_3895159_+|plate	baseplate assembly protein	plate	E5FFH4	Burkholderia_phage	92.5	4.1e-55
AXF09538.1|3895155_3896070_+|plate	baseplate assembly protein	plate	E5FFH3	Burkholderia_phage	82.8	2.7e-135
AXF09539.1|3896062_3896605_+|tail	phage tail protein I	tail	E5FFH2	Burkholderia_phage	90.6	1.5e-88
AXF09540.1|3896608_3898198_+|tail	phage tail protein	tail	E5E3Q7	Burkholderia_phage	68.0	1.6e-172
AXF09541.1|3899132_3900305_+|tail	phage tail protein	tail	E5FFG9	Burkholderia_phage	88.5	4.9e-198
AXF09542.1|3900321_3900831_+|tail	phage major tail tube protein	tail	E5FFG8	Burkholderia_phage	87.0	6.2e-81
AXF09543.1|3900905_3901190_+|tail	phage tail assembly protein	tail	E5FFG7	Burkholderia_phage	96.8	1.8e-42
AXF09544.1|3901222_3901342_+|tail	GpE family phage tail protein	tail	E5FFG6	Burkholderia_phage	92.3	9.7e-14
AXF09545.1|3901338_3903876_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	85.0	0.0e+00
AXF09546.1|3903890_3904316_+	oxidoreductase	NA	E5FFG4	Burkholderia_phage	86.2	6.3e-63
AXF09547.1|3904312_3905350_+	late control protein	NA	E5FFG3	Burkholderia_phage	88.7	3.8e-178
AXF09548.1|3905942_3906668_-	alpha/beta hydrolase	NA	K4NZS4	Burkholderia_phage	42.6	1.9e-43
AXF09549.1|3906722_3907157_-	transcriptional regulator	NA	A4JWR8	Burkholderia_virus	69.9	3.1e-49
AXF09550.1|3907241_3907478_+	hypothetical protein	NA	E5E3P3	Burkholderia_phage	77.3	2.7e-23
AXF09551.1|3907481_3907760_+	DNA-binding protein	NA	E5E3P2	Burkholderia_phage	78.0	8.1e-35
AXF09552.1|3907772_3908021_+	transcriptional regulator	NA	K4PAZ0	Burkholderia_phage	92.7	4.1e-38
AXF09553.1|3908103_3908322_+	hypothetical protein	NA	NA	NA	NA	NA
AXF09554.1|3908327_3908525_+	hypothetical protein	NA	E5E3N9	Burkholderia_phage	67.2	1.5e-14
AXF09555.1|3908572_3908773_+	hypothetical protein	NA	K4NXL1	Burkholderia_phage	52.4	1.8e-07
AXF09556.1|3908769_3909045_+	hypothetical protein	NA	A4JWQ9	Burkholderia_virus	72.5	3.0e-21
AXF09557.1|3909047_3911846_+	hypothetical protein	NA	E5E3N5	Burkholderia_phage	86.6	0.0e+00
AXF09558.1|3912644_3913721_+|integrase	integrase	integrase	A0A1S5NNJ1	Burkholderia_phage	82.4	2.8e-176
AXF09559.1|3914181_3915099_+	cytochrome c5 family protein	NA	NA	NA	NA	NA
3913729:3913747	attR	AACTGTATTTTCACTGTAC	NA	NA	NA	NA
AXF09560.1|3915208_3915784_-	hypothetical protein	NA	NA	NA	NA	NA
AXF09561.1|3915942_3918048_-	ATP-dependent DNA helicase Rep	NA	A7KV33	Bacillus_phage	35.1	7.2e-99
AXF09562.1|3918142_3918400_-	hypothetical protein	NA	NA	NA	NA	NA
AXF09563.1|3918466_3919516_+	oxidoreductase	NA	NA	NA	NA	NA
AXF09564.1|3919723_3920074_+	hypothetical protein	NA	NA	NA	NA	NA
AXF09565.1|3920571_3921690_+	glycine cleavage system protein T	NA	NA	NA	NA	NA
AXF09566.1|3921761_3922142_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
AXF09567.1|3922212_3925149_+	glycine dehydrogenase (aminomethyl-transferring)	NA	M4QFZ1	Prochlorococcus_phage	50.7	1.1e-257
AXF09568.1|3925264_3926395_+	alginate lyase	NA	NA	NA	NA	NA
AXF09569.1|3926424_3927813_+	L-serine ammonia-lyase	NA	NA	NA	NA	NA
AXF09570.1|3928013_3929732_+	thiamine pyrophosphate-binding protein	NA	E5ERI2	Ostreococcus_lucimarinus_virus	26.5	4.3e-25
AXF09571.1|3929814_3930963_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXF09572.1|3931131_3935079_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AXF09573.1|3935861_3938111_-	primosomal protein N'	NA	NA	NA	NA	NA
AXF09574.1|3938586_3939687_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AXF09575.1|3939895_3940693_+	ArtI protein	NA	NA	NA	NA	NA
AXF09576.1|3941623_3943354_-	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	30.4	6.4e-29
AXF09577.1|3943605_3944031_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
AXF09578.1|3944141_3945536_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
AXF09579.1|3945661_3946546_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
AXF09580.1|3946685_3948227_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
AXF09581.1|3948285_3948825_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
AXF09582.1|3948827_3949298_-	ATP synthase subunit B	NA	NA	NA	NA	NA
AXF09583.1|3949433_3949703_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
AXF09584.1|3949784_3950636_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
AXF09585.1|3950793_3951348_-	ATP synthase subunit I	NA	NA	NA	NA	NA
AXF09586.1|3951833_3952721_-	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	32.4	1.0e-14
AXF09587.1|3952739_3953531_-	ParA family protein	NA	A0A0K2FLP4	Brevibacillus_phage	31.3	1.2e-22
AXF09588.1|3953596_3954295_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
AXF09589.1|3954291_3956250_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
