assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003325455.1_ASM332545v1	CP025198	Acidipropionibacterium sp. JS278 chromosome, complete genome	2	540371-543958	1,1,2,2	CRT,PILER-CR,CRISPRCasFinder,PILER-CR	no		WYL,csa3,cas2,cas1,csb3,cas3,csb2gr5,csb1gr7,DEDDh,cas7,cas6e,DinG	Orphan	NGCCTCAACGAAGGGCTCCCCGGTAAAGGGGAGCGAC,GCCTCAACGAAGGGCTCCCC,GCCTCAACGAAGGGCTCCCCGGCAAAGGGGAGCGAC,GCCTCAACGAAGGGCTCCCCGGTAAAGGGGAGCGAC	37,20,36,36	0	0	NA	NA	NA:NA:NA:NA	49,46,48,46	49	Orphan	WYL,csa3,cas2,cas1,csb3,cas3,csb2gr5,csb1gr7,DEDDh,cas7,cas6e,DinG	NA,NA	NA|297aa|up_9|CP025198.1_528740_529631_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|296aa|up_8|CP025198.1_529627_530515_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|415aa|up_7|CP025198.1_530536_531781_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|376aa|up_6|CP025198.1_531845_532973_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|110aa|up_5|CP025198.1_533404_533734_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|234aa|up_4|CP025198.1_534397_535099_-	PRK05282, PRK05282, dipeptidase PepE	NA|274aa|up_3|CP025198.1_535326_536148_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|320aa|up_2|CP025198.1_536301_537261_+	pfam06675, DUF1177, Protein of unknown function (DUF1177)	NA|458aa|up_1|CP025198.1_537263_538637_+	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|433aa|up_0|CP025198.1_538674_539973_+	PRK07906, PRK07906, hypothetical protein; Provisional	NA|312aa|down_0|CP025198.1_544562_545498_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|493aa|down_1|CP025198.1_545571_547050_+	cd07804, FGGY_XK_like_1, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases	NA|509aa|down_2|CP025198.1_547084_548611_+	cd07802, FGGY_L-XK, L-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases	NA|346aa|down_3|CP025198.1_548625_549663_+	cd12171, 2-Hacid_dh_10, Putative D-isomer specific 2-hydroxyacid dehydrogenases	NA|219aa|down_4|CP025198.1_549727_550384_+	COG0235, AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]	NA|280aa|down_5|CP025198.1_550380_551220_+	cd19132, AKR_AKR5D1_E1, AKR5D and AKR5E families of aldo-keto reductase (AKR)	NA|271aa|down_6|CP025198.1_551222_552035_+	COG1830, FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]	NA|349aa|down_7|CP025198.1_552031_553078_+	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase	NA|296aa|down_8|CP025198.1_553696_554584_+	cd06267, PBP1_LacI_sugar_binding-like, ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily	NA|784aa|down_9|CP025198.1_554794_557146_+	pfam12831, FAD_oxidored, FAD dependent oxidoreductase
GCA_003325455.1_ASM332545v1	CP025198	Acidipropionibacterium sp. JS278 chromosome, complete genome	3	569272-570607	2,3,3	CRT,CRISPRCasFinder,PILER-CR	no	cas2,cas1,csb3,cas3,csb2gr5,csb1gr7	WYL,csa3,cas2,cas1,csb3,cas3,csb2gr5,csb1gr7,DEDDh,cas7,cas6e,DinG	Unclear	NNGCCTCAACGAAGGGCTCCCCGGCAAAGGGGAGCGAC,GCCTCAACGAAGGGCTCCCCGGCAAAGGGGAGCGAC,GCCTCAACGAAGGGCTCCCCGGCAAAGGGGAGCGAC	38,36,36	0	0	NA	NA	NA:NA:NA	18,17,14	18	Unclear	WYL,csa3,cas2,cas1,csb3,cas3,csb2gr5,csb1gr7,DEDDh,cas7,cas6e,DinG	NA,NA|220aa|down_9|CP025198.1_588639_589299_+	NA|784aa|up_9|CP025198.1_554794_557146_+	pfam12831, FAD_oxidored, FAD dependent oxidoreductase	NA|480aa|up_8|CP025198.1_557409_558849_+	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|276aa|up_7|CP025198.1_559060_559888_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|295aa|up_6|CP025198.1_559981_560866_-	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|243aa|up_5|CP025198.1_560899_561628_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|753aa|up_4|CP025198.1_561637_563896_-	pfam01055, Glyco_hydro_31, Glycosyl hydrolases family 31	NA|499aa|up_3|CP025198.1_563888_565385_-	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]	NA|416aa|up_2|CP025198.1_565483_566731_-	pfam07221, GlcNAc_2-epim, N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	NA|294aa|up_1|CP025198.1_566778_567660_-	COG3684, LacD, Tagatose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]	NA|318aa|up_0|CP025198.1_567685_568639_-	COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism]	NA|256aa|down_0|CP025198.1_570729_571497_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|519aa|down_1|CP025198.1_571493_573050_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas2|100aa|down_2|CP025198.1_578984_579284_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|535aa|down_3|CP025198.1_579280_580885_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	csb3|340aa|down_4|CP025198.1_580851_581871_-	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas3|877aa|down_5|CP025198.1_581867_584498_-	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb2gr5|525aa|down_6|CP025198.1_584494_586069_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	csb1gr7|403aa|down_7|CP025198.1_586071_587280_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	NA|160aa|down_8|CP025198.1_587925_588405_-	cd00672, CysRS_core, catalytic core domain of cysteinyl tRNA synthetase	NA|220aa|down_9|CP025198.1_588639_589299_+	NA
GCA_003325455.1_ASM332545v1	CP025198	Acidipropionibacterium sp. JS278 chromosome, complete genome	4	573253-578799	4,4,3	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,csb3,cas3,csb2gr5,csb1gr7	WYL,csa3,cas2,cas1,csb3,cas3,csb2gr5,csb1gr7,DEDDh,cas7,cas6e,DinG	Unclear	GCCTCAACGAAGGGCTCCCCGGCAAAGGGGAGCGAC,GCCTCAACGAAGGGCTCCCCGGCAAAGGGGAGCGAC,GCCTCAACGAAGGGCTCCCCGGCAAAGGGGAGCGAC	36,36,36	1	1	574295-574328	CP025198.1_1998138-1998105	NA:NA:NA	76,76,76	76	Unclear	WYL,csa3,cas2,cas1,csb3,cas3,csb2gr5,csb1gr7,DEDDh,cas7,cas6e,DinG	NA,NA|220aa|down_7|CP025198.1_588639_589299_+	NA|276aa|up_9|CP025198.1_559060_559888_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|295aa|up_8|CP025198.1_559981_560866_-	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|243aa|up_7|CP025198.1_560899_561628_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|753aa|up_6|CP025198.1_561637_563896_-	pfam01055, Glyco_hydro_31, Glycosyl hydrolases family 31	NA|499aa|up_5|CP025198.1_563888_565385_-	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]	NA|416aa|up_4|CP025198.1_565483_566731_-	pfam07221, GlcNAc_2-epim, N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	NA|294aa|up_3|CP025198.1_566778_567660_-	COG3684, LacD, Tagatose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]	NA|318aa|up_2|CP025198.1_567685_568639_-	COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism]	NA|256aa|up_1|CP025198.1_570729_571497_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|519aa|up_0|CP025198.1_571493_573050_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas2|100aa|down_0|CP025198.1_578984_579284_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|535aa|down_1|CP025198.1_579280_580885_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	csb3|340aa|down_2|CP025198.1_580851_581871_-	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas3|877aa|down_3|CP025198.1_581867_584498_-	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb2gr5|525aa|down_4|CP025198.1_584494_586069_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	csb1gr7|403aa|down_5|CP025198.1_586071_587280_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	NA|160aa|down_6|CP025198.1_587925_588405_-	cd00672, CysRS_core, catalytic core domain of cysteinyl tRNA synthetase	NA|220aa|down_7|CP025198.1_588639_589299_+	NA	NA|437aa|down_8|CP025198.1_589442_590753_+	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters	NA|76aa|down_9|CP025198.1_590756_590984_-	PRK09582, chaB, putative cation transport regulator ChaB
GCA_003325455.1_ASM332545v1	CP025198	Acidipropionibacterium sp. JS278 chromosome, complete genome	5	1248765-1252826	5,4,5	CRISPRCasFinder,CRT,PILER-CR	no	cas3,csb2gr5,cas7,cas6e	WYL,csa3,cas2,cas1,csb3,cas3,csb2gr5,csb1gr7,DEDDh,cas7,cas6e,DinG	Unclear	GGGCTCACCCCCGCATACGCGGGGCGGAT,GGGCTCACCCCCGCATACGCGGGGCGGAT,GGCTCACCCCCGCATACGCGGGGCGGAT	29,29,28	0	0	NA	NA	NA:NA:NA	66,66,61	66	Unclear	WYL,csa3,cas2,cas1,csb3,cas3,csb2gr5,csb1gr7,DEDDh,cas7,cas6e,DinG	NA|235aa|up_3|CP025198.1_1240632_1241337_+,NA	NA|197aa|up_9|CP025198.1_1235011_1235602_+	pfam12277, DUF3618, Protein of unknown function (DUF3618)	NA|117aa|up_8|CP025198.1_1235598_1235949_+	smart00883, Cpn10, Chaperonin 10 Kd subunit	NA|259aa|up_7|CP025198.1_1235950_1236727_-	PRK07567, PRK07567, glutamine amidotransferase; Provisional	NA|455aa|up_6|CP025198.1_1236800_1238165_-	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|243aa|up_5|CP025198.1_1238592_1239321_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|435aa|up_4|CP025198.1_1239317_1240622_-	pfam08353, DUF1727, Domain of unknown function (DUF1727)	NA|235aa|up_3|CP025198.1_1240632_1241337_+	NA	NA|524aa|up_2|CP025198.1_1241329_1242901_+	cd03468, PolY_like, DNA Polymerase Y-family	NA|1145aa|up_1|CP025198.1_1242934_1246369_+	PRK05672, dnaE2, error-prone DNA polymerase; Validated	NA|630aa|up_0|CP025198.1_1246419_1248309_-	TIGR00909, putative_amino_acid_transporter, amino acid transporter	cas3|1243aa|down_0|CP025198.1_1252864_1256593_-	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb2gr5|444aa|down_1|CP025198.1_1256589_1257921_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas7|423aa|down_2|CP025198.1_1257917_1259186_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	cas6e|225aa|down_3|CP025198.1_1259273_1259948_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	NA|167aa|down_4|CP025198.1_1260247_1260748_+	cd02138, TdsD-like, nitroreductase similar to Burkholderia pseudomallei TdsD	NA|486aa|down_5|CP025198.1_1260761_1262219_-	PRK11049, PRK11049, D-alanine/D-serine/glycine permease; Provisional	NA|202aa|down_6|CP025198.1_1262465_1263071_+	pfam18143, HAD_SAK_2, HAD domain in Swiss Army Knife RNA repair proteins	NA|266aa|down_7|CP025198.1_1263024_1263822_-	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA|209aa|down_8|CP025198.1_1263875_1264502_+	cd03140, GATase1_PfpI_3, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus	NA|160aa|down_9|CP025198.1_1264482_1264962_+	COG1846, MarR, Transcriptional regulators [Transcription]
