The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP030194	Salmonella enterica strain SA20080453 chromosome, complete genome	4651373	1060296	1123643	4651373	tRNA,lysis,tail,portal,integrase,transposase,capsid,head,plate	Salmonella_phage(88.64%)	65	1048742:1048757	1077939:1077954
1048742:1048757	attL	TTGCCGTCCAGCATAT	NA	NA	NA	NA
AXD28004.1|1060296_1061396_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.6	1.1e-47
AXD28005.1|1061779_1062805_-|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	99.1	1.4e-201
AXD28006.1|1062808_1063441_-	phage repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	99.5	3.3e-116
AXD28007.1|1063560_1063803_+	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	100.0	1.1e-38
AXD28008.1|1063835_1064345_+	hypothetical protein	NA	A0A1S6L008	Salmonella_phage	95.3	5.4e-85
AXD28009.1|1064431_1064707_-	hypothetical protein	NA	NA	NA	NA	NA
AXD31102.1|1064791_1064986_+	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	84.1	5.3e-25
AXD28010.1|1064949_1065291_+	hypothetical protein	NA	E5G6L5	Salmonella_phage	84.1	6.0e-48
AXD28011.1|1065358_1065586_+	DUF2732 domain-containing protein	NA	A0A0M3UL87	Salmonella_phage	64.0	8.1e-17
AXD28012.1|1065585_1065813_+	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	66.7	5.4e-21
AXD28013.1|1065809_1066667_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	70.2	4.2e-114
AXD28014.1|1066663_1069057_+	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	88.8	0.0e+00
AXD28015.1|1069076_1069304_-	hypothetical protein	NA	NA	NA	NA	NA
AXD28016.1|1069441_1069630_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	91.7	5.7e-24
AXD28017.1|1069960_1071163_+	DNA (cytosine-5-)-methyltransferase	NA	M1PSQ0	Streptococcus_phage	37.1	5.6e-64
AXD28018.1|1071125_1072043_+	restriction endonuclease	NA	NA	NA	NA	NA
AXD28019.1|1072089_1073124_-|portal	phage portal protein	portal	E5G6M3	Salmonella_phage	95.0	4.8e-189
AXD28020.1|1073123_1074890_-	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	96.6	0.0e+00
AXD28021.1|1075032_1075866_+|capsid	capsid protein	capsid	E5G6M5	Salmonella_phage	95.3	8.5e-128
AXD28022.1|1075882_1076950_+|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	98.0	2.8e-192
AXD28023.1|1076953_1077604_+	hypothetical protein	NA	A0A1S6KZX1	Salmonella_phage	98.6	1.6e-113
AXD28024.1|1077697_1078162_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	96.1	6.0e-83
1077939:1077954	attR	ATATGCTGGACGGCAA	NA	NA	NA	NA
AXD28025.1|1078161_1078365_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
AXD28026.1|1078368_1078584_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	100.0	5.9e-33
AXD28027.1|1078564_1079074_+	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	98.2	1.9e-93
AXD28028.1|1079078_1079453_+	hypothetical protein	NA	NA	NA	NA	NA
AXD28029.1|1079449_1079878_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	96.4	8.0e-66
AXD28030.1|1079807_1080011_+	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	95.5	2.2e-29
AXD28031.1|1079973_1080405_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	93.7	3.8e-71
AXD28032.1|1080397_1080841_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	81.0	5.4e-57
AXD28033.1|1081935_1082514_+|plate	phage baseplate assembly protein V	plate	A0A1S6KZX7	Salmonella_phage	85.4	1.8e-92
AXD28034.1|1082510_1082870_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	85.7	6.1e-51
AXD28035.1|1082856_1083765_+|plate	baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	92.7	5.2e-147
AXD28036.1|1083757_1084363_+|tail	phage tail protein I	tail	E5G6N9	Salmonella_phage	98.0	1.2e-115
AXD28037.1|1084359_1086015_+|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	97.6	6.1e-312
AXD28038.1|1086017_1086557_+|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	98.9	5.5e-96
AXD28039.1|1086560_1087178_-|tail	tail fiber assembly protein	tail	A0A1S6KZY8	Salmonella_phage	99.5	2.2e-112
AXD28040.1|1087147_1088137_-|tail	phage tail protein	tail	A0A1S6KZZ0	Salmonella_phage	98.8	3.7e-191
AXD28041.1|1088166_1088724_+	recombinase family protein	NA	A0A1S6L009	Salmonella_phage	98.9	2.5e-99
AXD28042.1|1088826_1089999_+|tail	phage tail protein	tail	A0A1S6KZY7	Salmonella_phage	99.5	4.9e-222
AXD28043.1|1090008_1090524_+|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	99.4	2.7e-92
AXD28044.1|1090578_1090881_+|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	100.0	2.5e-45
AXD28045.1|1090895_1091015_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	100.0	1.8e-15
AXD28046.1|1093810_1094296_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	99.2	8.3e-67
AXD28047.1|1094292_1095393_+	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	95.6	9.0e-194
AXD31103.1|1095461_1095680_+	levansucrase regulator	NA	Q53ZE7	Salmonella_virus	100.0	2.1e-38
AXD31104.1|1096231_1097395_-	secretion protein HlyD	NA	NA	NA	NA	NA
AXD28048.1|1097402_1099583_-	type I secretion system permease/ATPase	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.8	9.9e-19
AXD28049.1|1099579_1100989_-	type I secretion protein TolC	NA	NA	NA	NA	NA
AXD28050.1|1101053_1111961_-	type I secretion C-terminal target domain-containing protein	NA	NA	NA	NA	NA
AXD31105.1|1112574_1113057_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
AXD28051.1|1113206_1113683_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
AXD28052.1|1113672_1113963_+	RnfH family protein	NA	NA	NA	NA	NA
AXD28053.1|1114124_1114463_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
AXD28054.1|1114611_1116273_-	DNA repair protein RecN	NA	NA	NA	NA	NA
AXD28055.1|1116358_1117237_-	NAD(+) kinase	NA	NA	NA	NA	NA
AXD31106.1|1117168_1117363_+	molecular chaperone GrpE	NA	NA	NA	NA	NA
AXD28056.1|1117359_1117953_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AXD28057.1|1118013_1119255_-	DUF21 domain-containing protein	NA	NA	NA	NA	NA
AXD28058.1|1119319_1120111_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
AXD28059.1|1120056_1120353_-	hypothetical protein	NA	NA	NA	NA	NA
AXD28060.1|1120276_1121638_+	signal recognition particle protein	NA	NA	NA	NA	NA
AXD28061.1|1121889_1122138_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AXD28062.1|1122156_1122705_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AXD28063.1|1122875_1123643_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
>prophage 2
CP030194	Salmonella enterica strain SA20080453 chromosome, complete genome	4651373	1561092	1602564	4651373	plate,holin,tail,portal,transposase,capsid,head,protease,terminase	Salmonella_phage(66.04%)	58	NA	NA
AXD28428.1|1561092_1562277_-	recombinase	NA	A0A2D1GN00	Marinobacter_phage	30.2	1.3e-33
AXD28429.1|1562278_1562488_-	hypothetical protein	NA	NA	NA	NA	NA
AXD28430.1|1562527_1562956_-	3'-5' exoribonuclease	NA	K7PLW7	Enterobacteria_phage	77.6	7.5e-64
AXD28431.1|1563033_1564074_-|transposase	IS481 family transposase	transposase	A0A077SLK2	Escherichia_phage	88.7	9.4e-185
AXD28432.1|1564301_1564664_-	DUF551 domain-containing protein	NA	S4TSR6	Salmonella_phage	81.6	2.2e-32
AXD28433.1|1564660_1565242_-	hypothetical protein	NA	Q5G8V2	Enterobacteria_phage	65.1	1.0e-55
AXD28434.1|1565234_1565546_-	hypothetical protein	NA	Q5G8V1	Enterobacteria_phage	64.3	3.2e-32
AXD28435.1|1565549_1565738_-	diguanylate phosphodiesterase	NA	A0A192Y8X2	Salmonella_phage	98.4	1.0e-25
AXD28436.1|1565740_1566256_-	ead/Ea22-like family protein	NA	C6ZR30	Salmonella_phage	54.5	4.5e-31
AXD28437.1|1566252_1566474_-	hypothetical protein	NA	A0A222YYR6	Escherichia_phage	80.6	2.6e-28
AXD28438.1|1566544_1567084_-	HD family hydrolase	NA	A0A192Y8M4	Salmonella_phage	100.0	2.6e-98
AXD28439.1|1567220_1568048_-	DUF2303 family protein	NA	Q8HAA2	Salmonella_phage	98.5	3.2e-151
AXD28440.1|1568105_1568477_-	hypothetical protein	NA	Q8HAA1	Salmonella_phage	100.0	1.1e-63
AXD28441.1|1568574_1568760_+	hypothetical protein	NA	NA	NA	NA	NA
AXD28442.1|1569291_1569987_-	helix-turn-helix transcriptional regulator	NA	Q8HAA0	Salmonella_phage	99.6	4.6e-127
AXD28443.1|1570084_1570309_+	XRE family transcriptional regulator	NA	A0A1C9IHV8	Salmonella_phage	100.0	1.9e-34
AXD28444.1|1570337_1570892_+	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	100.0	6.9e-102
AXD28445.1|1570888_1572031_+	peptidase	NA	A0A1C9IHV9	Salmonella_phage	97.4	1.6e-206
AXD28446.1|1572027_1572252_+	hypothetical protein	NA	A0A1C9II64	Salmonella_phage	100.0	3.3e-39
AXD28447.1|1572248_1573193_+	helix-turn-helix domain-containing protein	NA	U5P0A0	Shigella_phage	81.5	3.3e-120
AXD28448.1|1573152_1573677_+	PerC family transcriptional regulator	NA	Q8HA95	Salmonella_phage	98.3	4.5e-95
AXD28449.1|1573676_1574330_+	phage N-6-adenine-methyltransferase	NA	A5LH72	Enterobacteria_phage	88.9	1.4e-114
AXD28450.1|1574326_1574716_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A1C9IIA0	Salmonella_phage	86.0	2.4e-61
AXD28451.1|1574687_1575593_+	KilA-N domain-containing protein	NA	A0A192Y6F8	Salmonella_phage	98.3	1.4e-160
AXD31121.1|1575600_1576590_+	DUF968 domain-containing protein	NA	A0A1C9IHZ5	Salmonella_phage	98.8	2.0e-192
AXD28452.1|1576604_1577183_+	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	56.7	9.3e-49
AXD28453.1|1577902_1579126_+	amidohydrolase	NA	NA	NA	NA	NA
AXD28454.1|1579239_1579629_+	hypothetical protein	NA	K7PHB9	Enterobacterial_phage	71.8	8.1e-41
AXD28455.1|1579615_1579897_+|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	80.6	2.6e-36
AXD28456.1|1579896_1580514_+	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	81.3	1.7e-93
AXD28457.1|1580510_1581029_+	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
AXD28458.1|1581071_1581422_+	HNH endonuclease	NA	Q8HA82	Salmonella_phage	95.7	3.1e-63
AXD28459.1|1581573_1582011_+|terminase	phage terminase small subunit P27 family	terminase	A0A1J0GV10	Halomonas_phage	63.7	9.2e-33
AXD28460.1|1582010_1583741_+|terminase	terminase large subunit	terminase	Q8W631	Enterobacteria_phage	58.5	2.1e-197
AXD31122.1|1584011_1585106_+|portal	phage portal protein	portal	A0A1W6JP33	Morganella_phage	82.7	1.3e-179
AXD28461.1|1585098_1585701_+|head,protease	HK97 family phage prohead protease	head,protease	Q8SBH9	Shigella_phage	91.5	6.0e-99
AXD28462.1|1585710_1586940_+|capsid	phage major capsid protein	capsid	Q8SBH8	Shigella_phage	91.2	1.1e-208
AXD28463.1|1587019_1587343_+|head,tail	phage gp6-like head-tail connector protein	head,tail	Q8SBH7	Shigella_phage	80.4	7.2e-43
AXD28464.1|1587339_1587744_+|head,tail	head-tail adaptor protein	head,tail	A0A192Y6C2	Salmonella_phage	76.1	3.0e-54
AXD28465.1|1587715_1588228_+	hypothetical protein	NA	Q8HAC8	Salmonella_phage	88.2	9.6e-82
AXD28466.1|1588224_1588782_+	hypothetical protein	NA	A0A192Y5U4	Salmonella_phage	94.0	3.0e-97
AXD28467.1|1588803_1588968_+	DUF2635 domain-containing protein	NA	Q8HAC6	Salmonella_phage	96.3	2.5e-23
AXD28468.1|1588957_1590454_+|tail	phage tail protein	tail	Q8HAC5	Salmonella_phage	98.6	4.8e-275
AXD28469.1|1590453_1590810_+|tail	phage tail protein	tail	A0A192Y8K0	Salmonella_phage	100.0	2.6e-62
AXD28470.1|1590806_1591133_+|tail	phage tail assembly protein	tail	Q8HAC3	Salmonella_phage	99.1	2.3e-52
AXD28471.1|1591217_1593146_+|tail	phage tail tape measure protein	tail	A0A192Y6D8	Salmonella_phage	97.0	0.0e+00
AXD28472.1|1593179_1594520_+	DNA circularization protein	NA	A0A192Y5U9	Salmonella_phage	98.7	4.5e-248
AXD28473.1|1594516_1595575_+|plate	baseplate protein	plate	A0A192Y7L7	Salmonella_phage	99.4	8.6e-202
AXD28474.1|1595574_1596108_+|plate	phage baseplate assembly protein V	plate	Q8HAB9	Salmonella_phage	97.7	2.3e-94
AXD28475.1|1596112_1596526_+	hypothetical protein	NA	A0A192Y6D0	Salmonella_phage	100.0	3.1e-75
AXD28476.1|1596518_1597598_+|plate	phage baseplate protein	plate	A0A192Y6E4	Salmonella_phage	98.9	2.7e-203
AXD28477.1|1597600_1598188_+	DUF2313 domain-containing protein	NA	A0A192Y5V3	Salmonella_phage	97.4	6.6e-111
AXD28478.1|1598174_1599527_+|tail	phage tail protein	tail	S4TP62	Salmonella_phage	86.5	1.5e-137
AXD28479.1|1599541_1600060_+|tail	phage tail protein	tail	A0A0U2QV64	Escherichia_phage	51.4	9.5e-45
AXD28480.1|1600295_1600493_+	hypothetical protein	NA	NA	NA	NA	NA
AXD28481.1|1600584_1601118_-|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	86.5	1.1e-83
AXD28482.1|1601120_1601984_-|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	94.7	3.2e-154
AXD31123.1|1602012_1602564_+	DNA-invertase	NA	A0A1S6L009	Salmonella_phage	88.8	4.1e-86
>prophage 3
CP030194	Salmonella enterica strain SA20080453 chromosome, complete genome	4651373	1676030	1684587	4651373	tRNA	Enterobacteria_phage(66.67%)	9	NA	NA
AXD28550.1|1676030_1676978_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	9.9e-24
AXD28551.1|1676961_1677693_+	ABC transporter permease	NA	NA	NA	NA	NA
AXD28552.1|1677673_1677781_-	hypothetical protein	NA	NA	NA	NA	NA
AXD28553.1|1677840_1678572_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	88.4	4.1e-102
AXD28554.1|1678794_1680480_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	90.7	3.8e-276
AXD28555.1|1680476_1681196_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXD28556.1|1681242_1681713_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	92.1	3.0e-74
AXD28557.1|1681854_1682313_-	DUF1307 domain-containing protein	NA	Q9EYF5	Enterobacteria_phage	74.5	1.2e-54
AXD28558.1|1682553_1684587_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	4.7e-55
>prophage 4
CP030194	Salmonella enterica strain SA20080453 chromosome, complete genome	4651373	1929576	1991504	4651373	tail,tRNA,integrase,transposase	Phage_Gifsy-2(18.18%)	58	1964795:1964811	1978797:1978813
AXD28756.1|1929576_1930548_-|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	tRNA	NA	NA	NA	NA
AXD28757.1|1930544_1931288_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	F5B419	Synechococcus_phage	30.9	9.2e-25
AXD28758.1|1931327_1931723_-	hypothetical protein	NA	NA	NA	NA	NA
AXD28759.1|1931970_1932744_-	DUF72 domain-containing protein	NA	Q859D1	Escherichia_coli_phage	79.5	4.2e-57
AXD28760.1|1933761_1934929_+|transposase	IS3 family transposase	transposase	Q716C2	Shigella_phage	96.7	2.1e-177
AXD31137.1|1934987_1935293_+|tail	phage tail protein	tail	S4TUB9	Salmonella_phage	93.8	2.8e-44
AXD28761.1|1936462_1937146_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	60.8	2.7e-79
AXD28762.1|1937466_1938033_-	hydrolase	NA	NA	NA	NA	NA
AXD28763.1|1938357_1940130_+|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
AXD28764.1|1940232_1940685_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA	NA
AXD28765.1|1940714_1941455_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AXD28766.1|1941491_1942013_+	crossover junction endodeoxyribonuclease RuvC	NA	G3MA90	Bacillus_virus	35.1	4.5e-10
AXD31138.1|1942094_1942706_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AXD28767.1|1942714_1943725_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.9	2.4e-07
AXD28768.1|1943776_1944562_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA	NA
AXD28769.1|1944558_1945314_-	zinc ABC transporter ATP-binding protein ZnuC	NA	G3M9Y6	Bacillus_virus	29.4	3.2e-17
AXD28770.1|1945377_1946337_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA	NA
AXD28771.1|1946352_1947672_+	murein DD-endopeptidase MepM	NA	A8ATH6	Listeria_phage	40.9	2.6e-14
AXD28772.1|1947562_1947790_-	hypothetical protein	NA	NA	NA	NA	NA
AXD28773.1|1947788_1948760_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA	NA
AXD28774.1|1948831_1950274_-	pyruvate kinase II	NA	NA	NA	NA	NA
AXD28775.1|1950397_1951267_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AXD28776.1|1951450_1951636_-	hypothetical protein	NA	NA	NA	NA	NA
AXD28777.1|1951608_1953084_+	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	37.5	2.6e-79
AXD28778.1|1953318_1955130_+	phosphogluconate dehydratase	NA	NA	NA	NA	NA
AXD28779.1|1955167_1955809_+	keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	NA	NA	NA	NA	NA
AXD28780.1|1955907_1957086_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
AXD28781.1|1957217_1957508_+	damage-inducible protein YebG	NA	NA	NA	NA	NA
AXD28782.1|1957575_1957929_+	hypothetical protein	NA	NA	NA	NA	NA
AXD28783.1|1958022_1958682_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
AXD28784.1|1958894_1960946_+	oligopeptidase B	NA	NA	NA	NA	NA
AXD28785.1|1960981_1961680_-	exodeoxyribonuclease X	NA	Q6UAU3	Klebsiella_phage	41.6	4.3e-08
AXD28786.1|1961703_1962360_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
AXD28787.1|1962466_1962697_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	60.3	2.9e-14
AXD28788.1|1962834_1963209_+	CopC domain-containing protein YobA	NA	NA	NA	NA	NA
AXD28789.1|1963209_1964085_+	hypothetical protein	NA	NA	NA	NA	NA
AXD28790.1|1964101_1964452_+	DUF2511 domain-containing protein	NA	NA	NA	NA	NA
AXD28791.1|1964512_1964632_+	hypothetical protein	NA	NA	NA	NA	NA
1964795:1964811	attL	TTTAACATTTCTTTTAC	NA	NA	NA	NA
AXD28792.1|1964818_1965220_-|integrase	integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	47.7	4.5e-26
AXD31139.1|1965864_1966203_+	hypothetical protein	NA	B6DZB9	Enterobacteria_phage	48.4	2.4e-20
AXD28793.1|1966361_1966646_-	addiction module antidote protein, HigA family	NA	A0A2L1IV52	Escherichia_phage	53.4	1.1e-21
AXD28794.1|1966645_1966924_-	Killer protein	NA	A0A2L1IV28	Escherichia_phage	55.4	1.8e-26
AXD28795.1|1967173_1967434_+	hypothetical protein	NA	NA	NA	NA	NA
AXD28796.1|1967504_1968188_-	PipA/GogA/GtgA family type III secretion system effector	NA	Q9MBM0	Phage_Gifsy-2	73.8	1.0e-86
AXD31140.1|1970169_1972440_+	E3 ubiquitin--protein ligase	NA	Q9MBL9	Phage_Gifsy-2	48.7	3.1e-23
AXD31141.1|1973758_1974001_+	hypothetical protein	NA	Q8HAB3	Salmonella_phage	70.3	1.2e-05
AXD28797.1|1974248_1976360_+	E3 ubiquitin--protein ligase	NA	Q9MBL9	Phage_Gifsy-2	45.7	6.9e-25
AXD28798.1|1977327_1977885_-|transposase	transposase	transposase	NA	NA	NA	NA
AXD28799.1|1979035_1981102_+	E3 ubiquitin--protein ligase	NA	Q9MBL9	Phage_Gifsy-2	69.9	5.1e-57
1978797:1978813	attR	TTTAACATTTCTTTTAC	NA	NA	NA	NA
AXD28800.1|1981281_1982253_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AXD28801.1|1982279_1983068_-	transcriptional regulator	NA	NA	NA	NA	NA
AXD28802.1|1983069_1983561_-	CaiF/GrlA family transcriptional regulator	NA	NA	NA	NA	NA
AXD28803.1|1983656_1984817_-	hypothetical protein	NA	NA	NA	NA	NA
AXD28804.1|1984809_1985556_-	fimbrial chaperone protein StdC	NA	NA	NA	NA	NA
AXD28805.1|1985597_1988087_-	fimbrial outer membrane usher protein StdB	NA	NA	NA	NA	NA
AXD31142.1|1988271_1988772_-	long polar fimbrial protein LpfA	NA	NA	NA	NA	NA
AXD28806.1|1989842_1990319_-	hypothetical protein	NA	NA	NA	NA	NA
AXD28807.1|1990405_1991504_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.6	1.1e-47
>prophage 5
CP030194	Salmonella enterica strain SA20080453 chromosome, complete genome	4651373	3331367	3342006	4651373	tail,transposase	Salmonella_phage(42.86%)	7	NA	NA
AXD29977.1|3331367_3332408_+|transposase	IS481 family transposase	transposase	A0A077SLK2	Escherichia_phage	89.0	7.2e-185
AXD29978.1|3335042_3337040_-	lytic transglycosylase domain-containing protein	NA	Q716G2	Shigella_phage	95.0	0.0e+00
AXD31201.1|3337039_3338266_-	acyltransferase	NA	E7C9U5	Salmonella_phage	66.5	1.8e-126
AXD29979.1|3338308_3338998_-	DNA transfer protein	NA	B9UDK9	Salmonella_phage	81.7	1.4e-88
AXD29980.1|3339000_3339456_-	DUF2824 family protein	NA	I6R0L6	Salmonella_phage	98.7	4.4e-86
AXD29981.1|3339455_3340094_-|tail	phage tail protein	tail	A0A088CPT1	Enterobacteria_phage	97.6	1.9e-87
AXD29982.1|3341523_3342006_-	packaged DNA stabilization protein p27	NA	Q716G8	Shigella_phage	83.6	2.5e-76
>prophage 6
CP030194	Salmonella enterica strain SA20080453 chromosome, complete genome	4651373	3551600	3586245	4651373	plate,integrase,transposase	Wolbachia_phage(20.0%)	30	3585071:3585086	3589306:3589321
AXD30169.1|3551600_3552602_-|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	27.5	6.8e-15
AXD30170.1|3554040_3554325_-	type VI secretion system PAAR protein	NA	NA	NA	NA	NA
AXD30171.1|3554518_3554707_-	hypothetical protein	NA	NA	NA	NA	NA
AXD30172.1|3554876_3555371_-	hypothetical protein	NA	NA	NA	NA	NA
AXD30173.1|3555367_3555580_-	hypothetical protein	NA	NA	NA	NA	NA
AXD30174.1|3556111_3556351_-	hypothetical protein	NA	NA	NA	NA	NA
AXD30175.1|3557111_3558965_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A2P1CFS5	Microbacterium_phage	51.0	3.1e-05
AXD30176.1|3558964_3559387_-	DUF4431 domain-containing protein	NA	NA	NA	NA	NA
AXD30177.1|3559389_3561933_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	25.2	2.9e-22
AXD30178.1|3562158_3562677_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AXD30179.1|3563354_3563855_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AXD31210.1|3563892_3565368_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AXD30180.1|3565370_3565799_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AXD30181.1|3565798_3567634_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AXD31211.1|3567600_3568647_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AXD31212.1|3568663_3569953_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
AXD30182.1|3569949_3570483_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AXD30183.1|3570485_3571829_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AXD31213.1|3571908_3572646_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
AXD30184.1|3572654_3575405_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	31.6	8.2e-87
AXD30185.1|3575401_3576163_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
AXD30186.1|3576167_3577571_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AXD30187.1|3577587_3581112_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AXD30188.1|3581122_3582472_+	hypothetical protein	NA	NA	NA	NA	NA
AXD30189.1|3582496_3582976_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AXD30190.1|3583010_3583874_+	flagellar biosynthesis protein FlgJ	NA	NA	NA	NA	NA
AXD30191.1|3583876_3584215_+	hypothetical protein	NA	NA	NA	NA	NA
AXD30192.1|3584252_3584525_+	hypothetical protein	NA	NA	NA	NA	NA
AXD30193.1|3584561_3585419_-	hypothetical protein	NA	NA	NA	NA	NA
3585071:3585086	attL	GAATACCGGAGAATGT	NA	NA	NA	NA
AXD30194.1|3585969_3586245_-|integrase	integrase	integrase	A0A1B5FPC6	Escherichia_phage	41.0	8.4e-08
AXD30194.1|3585969_3586245_-|integrase	integrase	integrase	A0A1B5FPC6	Escherichia_phage	41.0	8.4e-08
3589306:3589321	attR	ACATTCTCCGGTATTC	NA	NA	NA	NA
