assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003293635.1_ASM329363v1	CP026548	Faecalibacterium prausnitzii strain 942/30-2 chromosome, complete genome	2	682179-685446	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,WYL,csa3,PD-DExK	Type I-C, Type I-U?,Type I-U	GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT,GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT,GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	33,33,33	0	0	NA	NA	NA:NA:NA	47,48,48	48	TypeI-C,TypeI-U?,TypeI-U	DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,WYL,csa3,PD-DExK	NA,NA|63aa|down_0|CP026548.1_685626_685815_-,NA|150aa|down_7|CP026548.1_691027_691477_+	NA|348aa|up_9|CP026548.1_670610_671654_-	COG3053, CitC, Citrate lyase synthetase [Energy production and conversion]	NA|456aa|up_8|CP026548.1_671646_673014_-	TIGR03125, citrate_citG, triphosphoribosyl-dephospho-CoA synthase CitG	NA|285aa|up_7|CP026548.1_673026_673881_-	COG0583, LysR, Transcriptional regulator [Transcription]	cas3|720aa|up_6|CP026548.1_674412_676572_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|233aa|up_5|CP026548.1_676649_677348_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|588aa|up_4|CP026548.1_677344_679108_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|295aa|up_3|CP026548.1_679111_679996_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|224aa|up_2|CP026548.1_679995_680667_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|344aa|up_1|CP026548.1_680663_681695_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|CP026548.1_681704_681995_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|63aa|down_0|CP026548.1_685626_685815_-	NA	NA|284aa|down_1|CP026548.1_685809_686661_+	TIGR00588, Includes:_DNA-apurinic_or_apyrimidinic_site_lyase, 8-oxoguanine DNA-glycosylase (ogg)	NA|179aa|down_2|CP026548.1_687001_687538_-	cd03395, PAP2_like_4, PAP2_like_4 proteins	NA|94aa|down_3|CP026548.1_687972_688254_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|290aa|down_4|CP026548.1_688379_689249_+	pfam06970, RepA_N, Replication initiator protein A (RepA) N-terminus	NA|278aa|down_5|CP026548.1_689248_690082_+	pfam13614, AAA_31, AAA domain	NA|310aa|down_6|CP026548.1_690038_690968_+	cd16407, ParB_N_like, ParB N-terminal, parA-binding, -like domain of bacterial and plasmid parABS partitioning systems	NA|150aa|down_7|CP026548.1_691027_691477_+	NA	NA|146aa|down_8|CP026548.1_691603_692041_+	pfam12957, DUF3846, Domain of unknown function (DUF3846)	NA|155aa|down_9|CP026548.1_692065_692530_+	pfam12687, DUF3801, Protein of unknown function (DUF3801)
GCA_003293635.1_ASM329363v1	CP026548	Faecalibacterium prausnitzii strain 942/30-2 chromosome, complete genome	4	1068191-1068416	4	CRISPRCasFinder	no	csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6	DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,WYL,csa3,PD-DExK	Type III-C,Type III-B,Type III-A,Type III-D	ATTGCAATTTATCCCCGCAAGGGGAC	26	0	0	NA	NA	NA	3	3	TypeIII-C,TypeIII-B,TypeIII-A,TypeIII-D	DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,WYL,csa3,PD-DExK	NA|233aa|up_4|CP026548.1_1062360_1063059_-,NA|152aa|up_3|CP026548.1_1063300_1063756_-,NA|364aa|up_0|CP026548.1_1067020_1068112_+,NA|338aa|down_1|CP026548.1_1069921_1070935_-	NA|553aa|up_9|CP026548.1_1055331_1056990_-	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional	NA|340aa|up_8|CP026548.1_1057067_1058087_-	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|188aa|up_7|CP026548.1_1058181_1058745_-	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|555aa|up_6|CP026548.1_1058760_1060425_-	PRK08527, PRK08527, acetolactate synthase large subunit	NA|402aa|up_5|CP026548.1_1061140_1062346_+	pfam05673, DUF815, Protein of unknown function (DUF815)	NA|233aa|up_4|CP026548.1_1062360_1063059_-	NA	NA|152aa|up_3|CP026548.1_1063300_1063756_-	NA	NA|291aa|up_2|CP026548.1_1063762_1064635_-	pfam13151, DUF3990, Protein of unknown function (DUF3990)	NA|643aa|up_1|CP026548.1_1064753_1066682_-	cd18032, DEXHc_RE_I_III_res, DEXH-box helicase domain of type III restriction enzyme res subunit	NA|364aa|up_0|CP026548.1_1067020_1068112_+	NA	csx1|482aa|down_0|CP026548.1_1068483_1069929_-	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	NA|338aa|down_1|CP026548.1_1069921_1070935_-	NA	NA|203aa|down_2|CP026548.1_1070941_1071550_-	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	NA|65aa|down_3|CP026548.1_1071704_1071899_+	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein	cas10|833aa|down_4|CP026548.1_1073346_1075845_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|178aa|down_5|CP026548.1_1075828_1076362_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|222aa|down_6|CP026548.1_1076364_1077030_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|327aa|down_7|CP026548.1_1076995_1077976_+	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4	csm5gr7|359aa|down_8|CP026548.1_1077972_1079049_+	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	cas6|252aa|down_9|CP026548.1_1079045_1079801_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCA_003293635.1_ASM329363v1	CP026548	Faecalibacterium prausnitzii strain 942/30-2 chromosome, complete genome	5	1072542-1073222	2,5,2	PILER-CR,CRISPRCasFinder,CRT	no	csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6	DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,WYL,csa3,PD-DExK	Type III-C,Type III-B,Type III-A,Type III-D	ATTGCAGCTTATCCCCGCAAGGGGACGATAAC,ATTGCAGCTTATCCCCGCAAGGGGACGATAAC,ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	32,32,32	0	0	NA	NA	NA:NA:NA	9,9,10	10	TypeIII-C,TypeIII-B,TypeIII-A,TypeIII-D	DEDDh,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,WYL,csa3,PD-DExK	NA|233aa|up_8|CP026548.1_1062360_1063059_-,NA|152aa|up_7|CP026548.1_1063300_1063756_-,NA|364aa|up_4|CP026548.1_1067020_1068112_+,NA|338aa|up_2|CP026548.1_1069921_1070935_-,NA|79aa|down_8|CP026548.1_1084497_1084734_+	NA|402aa|up_9|CP026548.1_1061140_1062346_+	pfam05673, DUF815, Protein of unknown function (DUF815)	NA|233aa|up_8|CP026548.1_1062360_1063059_-	NA	NA|152aa|up_7|CP026548.1_1063300_1063756_-	NA	NA|291aa|up_6|CP026548.1_1063762_1064635_-	pfam13151, DUF3990, Protein of unknown function (DUF3990)	NA|643aa|up_5|CP026548.1_1064753_1066682_-	cd18032, DEXHc_RE_I_III_res, DEXH-box helicase domain of type III restriction enzyme res subunit	NA|364aa|up_4|CP026548.1_1067020_1068112_+	NA	csx1|482aa|up_3|CP026548.1_1068483_1069929_-	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	NA|338aa|up_2|CP026548.1_1069921_1070935_-	NA	NA|203aa|up_1|CP026548.1_1070941_1071550_-	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	NA|65aa|up_0|CP026548.1_1071704_1071899_+	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein	cas10|833aa|down_0|CP026548.1_1073346_1075845_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|178aa|down_1|CP026548.1_1075828_1076362_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|222aa|down_2|CP026548.1_1076364_1077030_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|327aa|down_3|CP026548.1_1076995_1077976_+	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4	csm5gr7|359aa|down_4|CP026548.1_1077972_1079049_+	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	cas6|252aa|down_5|CP026548.1_1079045_1079801_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|1054aa|down_6|CP026548.1_1080027_1083189_+	cd09203, PLDc_N_DEXD_b1, N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain	NA|133aa|down_7|CP026548.1_1083578_1083977_+	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi)	NA|79aa|down_8|CP026548.1_1084497_1084734_+	NA	NA|67aa|down_9|CP026548.1_1084800_1085001_+	pfam13240, zinc_ribbon_2, zinc-ribbon domain
