assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003288435.1_ASM328843v1	CP030327	Pseudomonas aeruginosa strain AR_458 chromosome, complete genome	1	236255-236368	1	CRISPRCasFinder	no		DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	Orphan	TATCCGCCATGAAACGTCGGCGCAGCGG	28	1	1	236283-236340	CP030327.1_2258226-2258169	NA	1	1	Orphan	DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	NA|227aa|up_8|CP030327.1_226473_227154_+,NA|63aa|up_3|CP030327.1_232510_232699_+,NA|39aa|down_8|CP030327.1_243849_243966_-	NA|64aa|up_9|CP030327.1_226175_226367_+	pfam10783, DUF2599, Protein of unknown function (DUF2599)	NA|227aa|up_8|CP030327.1_226473_227154_+	NA	NA|169aa|up_7|CP030327.1_227245_227752_+	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|317aa|up_6|CP030327.1_227748_228699_+	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]	NA|805aa|up_5|CP030327.1_228907_231322_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|384aa|up_4|CP030327.1_231362_232514_+	COG3182, PiuB, Uncharacterized iron-regulated membrane protein [Function unknown]	NA|63aa|up_3|CP030327.1_232510_232699_+	NA	NA|404aa|up_2|CP030327.1_232700_233912_+	cd17330, MFS_SLC46_TetA_like, Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters	NA|547aa|up_1|CP030327.1_233908_235549_+	COG4188, COG4188, Predicted dienelactone hydrolase [General function prediction only]	NA|179aa|up_0|CP030327.1_235590_236127_+	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]	NA|216aa|down_0|CP030327.1_236373_237021_-	COG0259, PdxH, Pyridoxamine-phosphate oxidase [Coenzyme metabolism]	NA|279aa|down_1|CP030327.1_237043_237880_-	pfam02567, PhzC-PhzF, Phenazine biosynthesis-like protein	NA|628aa|down_2|CP030327.1_237893_239777_-	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|208aa|down_3|CP030327.1_239773_240397_-	cd01013, isochorismatase, Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological systems	NA|406aa|down_4|CP030327.1_240393_241611_-	COG3200, AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]	NA|163aa|down_5|CP030327.1_241634_242123_-	pfam03284, PHZA_PHZB, Phenazine biosynthesis protein A/B	NA|163aa|down_6|CP030327.1_242158_242647_-	pfam03284, PHZA_PHZB, Phenazine biosynthesis protein A/B	NA|238aa|down_7|CP030327.1_243128_243842_-	pfam03472, Autoind_bind, Autoinducer binding domain	NA|39aa|down_8|CP030327.1_243849_243966_-	NA	NA|256aa|down_9|CP030327.1_244603_245371_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]
GCA_003288435.1_ASM328843v1	CP030327	Pseudomonas aeruginosa strain AR_458 chromosome, complete genome	2	2699466-2699579	2	CRISPRCasFinder	no		DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	Orphan	TCATACCTTGCCCTCCAGTTCTTTGGCC	28	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	NA|185aa|up_8|CP030327.1_2690560_2691115_+,NA|251aa|up_6|CP030327.1_2691883_2692636_+,NA|168aa|up_3|CP030327.1_2694389_2694893_+,NA|50aa|up_1|CP030327.1_2695888_2696038_+,NA	NA|165aa|up_9|CP030327.1_2689800_2690295_-	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|185aa|up_8|CP030327.1_2690560_2691115_+	NA	NA|210aa|up_7|CP030327.1_2691136_2691766_-	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|251aa|up_6|CP030327.1_2691883_2692636_+	NA	NA|314aa|up_5|CP030327.1_2692655_2693597_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|192aa|up_4|CP030327.1_2693709_2694285_+	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|168aa|up_3|CP030327.1_2694389_2694893_+	NA	NA|351aa|up_2|CP030327.1_2694871_2695924_-	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|50aa|up_1|CP030327.1_2695888_2696038_+	NA	NA|796aa|up_0|CP030327.1_2696034_2698422_+	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|385aa|down_0|CP030327.1_2700459_2701614_-	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|366aa|down_1|CP030327.1_2701668_2702766_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|367aa|down_2|CP030327.1_2703184_2704285_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|457aa|down_3|CP030327.1_2704403_2705774_-	PRK07480, PRK07480, putative aminotransferase; Validated	NA|453aa|down_4|CP030327.1_2705839_2707198_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|down_5|CP030327.1_2707238_2707991_-	pfam07722, Peptidase_C26, Peptidase C26	NA|459aa|down_6|CP030327.1_2708269_2709646_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|354aa|down_7|CP030327.1_2709901_2710963_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|222aa|down_8|CP030327.1_2711023_2711689_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|293aa|down_9|CP030327.1_2711851_2712730_+	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase
GCA_003288435.1_ASM328843v1	CP030327	Pseudomonas aeruginosa strain AR_458 chromosome, complete genome	3	4709397-4710085	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no		DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	Orphan	GTTCACTGCCGTACAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTANAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	11,11,11	11	Orphan	DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	NA|71aa|up_6|CP030327.1_4702563_4702776_-,NA|41aa|up_0|CP030327.1_4709002_4709125_+,NA|141aa|down_0|CP030327.1_4710880_4711303_-,NA|59aa|down_5|CP030327.1_4714481_4714658_-	NA|113aa|up_9|CP030327.1_4699533_4699872_-	pfam06942, GlpM, GlpM protein	NA|513aa|up_8|CP030327.1_4699995_4701534_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|252aa|up_7|CP030327.1_4701811_4702567_-	PRK10906, PRK10906, DeoR/GlpR family transcriptional regulator	NA|71aa|up_6|CP030327.1_4702563_4702776_-	NA	NA|506aa|up_5|CP030327.1_4702772_4704290_-	PRK00047, glpK, glycerol kinase GlpK	NA|280aa|up_4|CP030327.1_4704329_4705169_-	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|157aa|up_3|CP030327.1_4705433_4705904_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|495aa|up_2|CP030327.1_4705967_4707452_+	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases	NA|262aa|up_1|CP030327.1_4707647_4708433_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|41aa|up_0|CP030327.1_4709002_4709125_+	NA	NA|141aa|down_0|CP030327.1_4710880_4711303_-	NA	NA|177aa|down_1|CP030327.1_4711402_4711933_-	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|66aa|down_2|CP030327.1_4712115_4712313_+	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|205aa|down_3|CP030327.1_4712315_4712930_-	PRK09975, PRK09975, DNA-binding transcriptional regulator EnvR; Provisional	NA|393aa|down_4|CP030327.1_4713295_4714474_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|59aa|down_5|CP030327.1_4714481_4714658_-	NA	NA|298aa|down_6|CP030327.1_4714784_4715678_-	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain	NA|498aa|down_7|CP030327.1_4715839_4717333_+	TIGR01722, Methylmalonate-semialdehyde_dehydrogenase, methylmalonic acid semialdehyde dehydrogenase	NA|299aa|down_8|CP030327.1_4717348_4718245_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|629aa|down_9|CP030327.1_4718346_4720233_+	cd05967, PrpE, Propionyl-CoA synthetase (PrpE)
GCA_003288435.1_ASM328843v1	CP030327	Pseudomonas aeruginosa strain AR_458 chromosome, complete genome	4	5087835-5087936	4	CRISPRCasFinder	no	DEDDh	DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	Unclear	GCGGCGGGTATCGGCGGATAACGCC	25	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	NA|454aa|up_7|CP030327.1_5079950_5081312_-,NA|106aa|down_6|CP030327.1_5094179_5094497_+	NA|286aa|up_9|CP030327.1_5078145_5079003_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|261aa|up_8|CP030327.1_5079143_5079926_-	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]	NA|454aa|up_7|CP030327.1_5079950_5081312_-	NA	NA|74aa|up_6|CP030327.1_5081454_5081676_-	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|271aa|up_5|CP030327.1_5082024_5082837_+	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold	NA|104aa|up_4|CP030327.1_5083054_5083366_+	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|552aa|up_3|CP030327.1_5083362_5085018_+	PRK09395, actP, cation/acetate symporter ActP	NA|600aa|up_2|CP030327.1_5085107_5086907_+	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	DEDDh|209aa|up_1|CP030327.1_5086903_5087530_+	PRK09145, PRK09145, 3'-5' exonuclease	NA|53aa|up_0|CP030327.1_5087638_5087797_+	pfam11752, DUF3309, Protein of unknown function (DUF3309)	NA|375aa|down_0|CP030327.1_5088071_5089196_+	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown]	NA|89aa|down_1|CP030327.1_5089228_5089495_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|611aa|down_2|CP030327.1_5089776_5091609_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|188aa|down_3|CP030327.1_5091671_5092235_-	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|276aa|down_4|CP030327.1_5092216_5093044_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|310aa|down_5|CP030327.1_5093050_5093980_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|106aa|down_6|CP030327.1_5094179_5094497_+	NA	NA|214aa|down_7|CP030327.1_5094643_5095285_+	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|300aa|down_8|CP030327.1_5095389_5096289_-	pfam00892, EamA, EamA-like transporter family	NA|112aa|down_9|CP030327.1_5096298_5096634_-	PRK10089, PRK10089, chaperone CsaA
GCA_003288435.1_ASM328843v1	CP030327	Pseudomonas aeruginosa strain AR_458 chromosome, complete genome	5	6237662-6238946	2,5,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3f,cas1	DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	Unclear	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	20,21,21	21	Unclear	DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	NA|82aa|up_7|CP030327.1_6217502_6217748_-,NA|266aa|up_1|CP030327.1_6235391_6236189_-,NA|81aa|down_2|CP030327.1_6241606_6241849_+,NA|43aa|down_6|CP030327.1_6247100_6247229_+,NA|194aa|down_7|CP030327.1_6247367_6247949_+,NA|58aa|down_8|CP030327.1_6248216_6248390_-	NA|70aa|up_9|CP030327.1_6216255_6216465_+	pfam07869, DUF1656, Protein of unknown function (DUF1656)	NA|335aa|up_8|CP030327.1_6216461_6217466_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|82aa|up_7|CP030327.1_6217502_6217748_-	NA	NA|305aa|up_6|CP030327.1_6218009_6218924_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|338aa|up_5|CP030327.1_6219096_6220110_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|188aa|up_4|CP030327.1_6220186_6220750_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_3|CP030327.1_6221393_6222158_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4343aa|up_2|CP030327.1_6222230_6235259_+	PRK05691, PRK05691, peptide synthase; Validated	NA|266aa|up_1|CP030327.1_6235391_6236189_-	NA	NA|171aa|up_0|CP030327.1_6236754_6237267_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|268aa|down_0|CP030327.1_6239298_6240102_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|503aa|down_1|CP030327.1_6240094_6241603_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|81aa|down_2|CP030327.1_6241606_6241849_+	NA	cas3f|1077aa|down_3|CP030327.1_6242015_6245246_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|down_4|CP030327.1_6245242_6246217_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|159aa|down_5|CP030327.1_6246515_6246992_+	PRK13872, PRK13872, conjugal transfer protein TrbF; Provisional	NA|43aa|down_6|CP030327.1_6247100_6247229_+	NA	NA|194aa|down_7|CP030327.1_6247367_6247949_+	NA	NA|58aa|down_8|CP030327.1_6248216_6248390_-	NA	NA|307aa|down_9|CP030327.1_6248891_6249812_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]
GCA_003288435.1_ASM328843v1	CP030327	Pseudomonas aeruginosa strain AR_458 chromosome, complete genome	6	6246478-6247946	3,6,3	PILER-CR,CRISPRCasFinder,CRT	no	cas3f,cas1	DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	Unclear	GTTCACTGCCGTGTAGGCAGCTAAGAAA,TTTCTTAGCTGCCTACACGGCAGTGAAC,TTTCTTAGCTGCCTACACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	24,24,24	24	Unclear	DinG,DEDDh,WYL,RT,csa3,cas3,PD-DExK,cas3f,cas1	NA|266aa|up_8|CP030327.1_6235391_6236189_-,NA|243aa|up_6|CP030327.1_6237658_6238387_-,NA|171aa|up_5|CP030327.1_6238355_6238868_-,NA|81aa|up_2|CP030327.1_6241606_6241849_+,NA|58aa|down_0|CP030327.1_6248216_6248390_-	NA|4343aa|up_9|CP030327.1_6222230_6235259_+	PRK05691, PRK05691, peptide synthase; Validated	NA|266aa|up_8|CP030327.1_6235391_6236189_-	NA	NA|171aa|up_7|CP030327.1_6236754_6237267_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|243aa|up_6|CP030327.1_6237658_6238387_-	NA	NA|171aa|up_5|CP030327.1_6238355_6238868_-	NA	NA|268aa|up_4|CP030327.1_6239298_6240102_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|503aa|up_3|CP030327.1_6240094_6241603_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|81aa|up_2|CP030327.1_6241606_6241849_+	NA	cas3f|1077aa|up_1|CP030327.1_6242015_6245246_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|up_0|CP030327.1_6245242_6246217_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|58aa|down_0|CP030327.1_6248216_6248390_-	NA	NA|307aa|down_1|CP030327.1_6248891_6249812_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|474aa|down_2|CP030327.1_6249844_6251266_-	pfam03573, OprD, outer membrane porin, OprD family	NA|209aa|down_3|CP030327.1_6251339_6251966_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|227aa|down_4|CP030327.1_6252020_6252701_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|287aa|down_5|CP030327.1_6252799_6253660_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|313aa|down_6|CP030327.1_6253760_6254699_+	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional	NA|547aa|down_7|CP030327.1_6254702_6256343_-	PRK13272, treA, alpha,alpha-trehalase TreA	NA|142aa|down_8|CP030327.1_6256701_6257127_+	COG4244, COG4244, Predicted membrane protein [Function unknown]	NA|440aa|down_9|CP030327.1_6257119_6258439_+	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
