The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP019613	Mycobacterium tuberculosis strain H112 chromosome, complete genome	4406346	1183445	1228872	4406346	transposase,tRNA	Burkholderia_virus(20.0%)	28	NA	NA
AWY87245.1|1183445_1184282_-|transposase	transposase	transposase	Q8W6R2	Burkholderia_virus	59.0	2.9e-83
AWY84479.1|1184380_1184707_-	hypothetical protein	NA	A0A1B3AZF8	Gordonia_phage	46.1	4.4e-16
AWY84480.1|1184943_1185162_+|transposase	transposase	transposase	NA	NA	NA	NA
AWY84481.1|1185183_1186713_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AWY87246.1|1186645_1187584_-	RNA polymerase sigma factor SigJ	NA	NA	NA	NA	NA
AWY84482.1|1187592_1188960_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
AWY84483.1|1189028_1190246_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
AWY84484.1|1190341_1191850_+	MFS transporter	NA	NA	NA	NA	NA
AWY84485.1|1191846_1192998_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
AWY84486.1|1193188_1194034_-	hypothetical protein	NA	NA	NA	NA	NA
AWY87247.1|1194010_1194490_+	hypothetical protein	NA	NA	NA	NA	NA
AWY84487.1|1194508_1194949_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
AWY84488.1|1194982_1195852_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
AWY84489.1|1195872_1196883_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
AWY84490.1|1197167_1197800_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AWY84491.1|1197866_1199096_-	isocitrate dehydrogenase	NA	NA	NA	NA	NA
AWY84492.1|1199378_1200728_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
AWY84493.1|1200739_1201879_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AWY87248.1|1201875_1202607_+	methyltransferase	NA	NA	NA	NA	NA
AWY84494.1|1202615_1210187_-	PPE family protein	NA	NA	NA	NA	NA
AWY87249.1|1210235_1211216_-	hypothetical protein	NA	NA	NA	NA	NA
AWY87250.1|1212011_1212512_+	hypothetical protein	NA	NA	NA	NA	NA
AWY84495.1|1216505_1216763_-	hypothetical protein	NA	NA	NA	NA	NA
AWY84496.1|1217018_1226492_-	PPE family protein	NA	NA	NA	NA	NA
AWY87252.1|1226529_1227021_-	hypothetical protein	NA	NA	NA	NA	NA
AWY84497.1|1227072_1227564_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AWY87251.1|1227600_1228341_-|transposase	transposase	transposase	NA	NA	NA	NA
AWY84498.1|1228635_1228872_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
CP019613	Mycobacterium tuberculosis strain H112 chromosome, complete genome	4406346	1270263	1321322	4406346	transposase,tRNA	Burkholderia_virus(18.18%)	53	NA	NA
AWY87257.1|1270263_1271100_+|transposase	transposase	transposase	Q8W6R2	Burkholderia_virus	59.0	2.9e-83
AWY84530.1|1271126_1271807_-	polyprenyl synthetase	NA	NA	NA	NA	NA
AWY84531.1|1272560_1272953_-	ribonuclease VapC46	NA	NA	NA	NA	NA
AWY84532.1|1272952_1273261_-	antitoxin VapB46	NA	NA	NA	NA	NA
AWY87259.1|1273409_1274114_+|transposase	transposase	transposase	NA	NA	NA	NA
AWY87258.1|1274103_1274781_+|transposase	transposase	transposase	NA	NA	NA	NA
AWY84533.1|1274970_1277148_+	PE family protein	NA	NA	NA	NA	NA
AWY84534.1|1277218_1278091_-	3-hydroxyacyl-thioester dehydratase HtdY	NA	NA	NA	NA	NA
AWY84535.1|1278164_1278875_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
AWY84536.1|1278920_1280873_+	short chain dehydrogenase	NA	NA	NA	NA	NA
AWY84537.1|1280873_1281737_-	cyclopropane mycolic acid synthase	NA	A0A2K9L4K8	Tupanvirus	33.9	3.1e-32
AWY84538.1|1281760_1282687_+	nucleoside hydrolase	NA	NA	NA	NA	NA
AWY84539.1|1282741_1284325_-	DNA polymerase	NA	NA	NA	NA	NA
AWY84540.1|1284321_1284936_-	hypothetical protein	NA	NA	NA	NA	NA
AWY87260.1|1285018_1285645_+	hypothetical protein	NA	NA	NA	NA	NA
AWY84541.1|1285800_1287378_-	GMP synthetase	NA	NA	NA	NA	NA
AWY87261.1|1287389_1288298_-	squalene synthase HpnD	NA	NA	NA	NA	NA
AWY84542.1|1288326_1289406_-	farnesyl-diphosphate synthase	NA	NA	NA	NA	NA
AWY84543.1|1289428_1290475_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AWY84544.1|1290538_1291327_+	hydrolase	NA	NA	NA	NA	NA
AWY84545.1|1291341_1293702_+	family 65 glycosyl hydrolase	NA	NA	NA	NA	NA
AWY84546.1|1294329_1294656_-	hypothetical protein	NA	NA	NA	NA	NA
AWY84547.1|1294648_1295887_-	hypothetical protein	NA	A0A2D2W2B8	Stenotrophomonas_phage	26.5	1.5e-11
AWY84548.1|1296257_1297859_-	hypothetical protein	NA	NA	NA	NA	NA
AWY84549.1|1297875_1298580_-	hypothetical protein	NA	NA	NA	NA	NA
AWY84550.1|1298697_1299264_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AWY84551.1|1299325_1300213_+	taurine catabolism dioxygenase	NA	NA	NA	NA	NA
AWY84552.1|1300247_1300547_+	antitoxin VapB47	NA	A0A2I6AZZ6	Macacine_betaherpesvirus	100.0	4.2e-45
AWY84553.1|1300543_1300954_+	ribonuclease VapC47	NA	NA	NA	NA	NA
AWY84554.1|1300986_1302723_-	cholesterol oxidase	NA	NA	NA	NA	NA
AWY84555.1|1302778_1303906_-	oxidoreductase	NA	NA	NA	NA	NA
AWY84556.1|1303925_1305515_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.3	6.2e-87
AWY84557.1|1305721_1306132_+	hypothetical protein	NA	NA	NA	NA	NA
AWY84558.1|1306141_1307041_-	anti-sigma-D factor RsdA	NA	NA	NA	NA	NA
AWY84559.1|1307033_1307672_-	ECF RNA polymerase sigma factor SigD	NA	NA	NA	NA	NA
AWY84560.1|1307689_1308517_-	hypothetical protein	NA	NA	NA	NA	NA
AWY84561.1|1308887_1309196_+	WhiB family transcriptional regulator	NA	A0A159B6S6	Tsukamurella_phage	48.5	5.0e-09
AWY84562.1|1309267_1310887_-	molecular chaperone GroEL	NA	A0A240F779	uncultured_virus	51.4	9.6e-136
AWY84563.1|1310981_1311284_-	molecular chaperone GroES	NA	A0A221S3C8	uncultured_virus	53.8	9.5e-21
AWY84564.1|1311550_1312585_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	S4VW33	Pandoravirus	37.6	1.6e-35
AWY84565.1|1312581_1313058_-	ribosomal-protein-alanine N-acetyltransferase RimI	NA	NA	NA	NA	NA
AWY87262.1|1313054_1313690_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
AWY84566.1|1313686_1314193_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AWY84567.1|1314189_1315416_-	alanine racemase	NA	NA	NA	NA	NA
AWY87263.1|1315375_1315606_+	hypothetical protein	NA	NA	NA	NA	NA
AWY84568.1|1315709_1316072_-	hypothetical protein	NA	NA	NA	NA	NA
AWY84569.1|1316243_1316495_+	hypothetical protein	NA	NA	NA	NA	NA
AWY84570.1|1316491_1316764_+	PPE family protein	NA	NA	NA	NA	NA
AWY84571.1|1317030_1317561_+	PPE family protein	NA	NA	NA	NA	NA
AWY84572.1|1317507_1317774_-	hypothetical protein	NA	NA	NA	NA	NA
AWY84573.1|1317878_1318634_-|transposase	transposase	transposase	U5N3V8	Enterobacteria_phage	30.3	1.5e-22
AWY87264.1|1318717_1319554_-|transposase	transposase	transposase	Q8W6R2	Burkholderia_virus	59.0	2.9e-83
AWY84574.1|1319753_1321322_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 3
CP019613	Mycobacterium tuberculosis strain H112 chromosome, complete genome	4406346	3012761	3065919	4406346	integrase,transposase,protease,tRNA	Klosneuvirus(16.67%)	53	3020584:3020600	3070999:3071015
AWY85945.1|3012761_3014321_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	39.2	2.8e-100
AWY87459.1|3014406_3015201_+	DNAase	NA	NA	NA	NA	NA
AWY85946.1|3015408_3016497_+	resuscitation-promoting factor RpfB	NA	Q856D9	Mycobacterium_phage	59.4	8.2e-22
AWY85947.1|3016469_3017423_+	ribosomal RNA small subunit methyltransferase A	NA	NA	NA	NA	NA
AWY87460.1|3017508_3018429_+	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
AWY85948.1|3018445_3018739_+	hypothetical protein	NA	NA	NA	NA	NA
AWY87461.1|3018786_3019017_-	hypothetical protein	NA	NA	NA	NA	NA
AWY85949.1|3018942_3020577_+	polyketide synthase	NA	NA	NA	NA	NA
3020584:3020600	attL	CGAGCAGACGCAAAATC	NA	NA	NA	NA
AWY85950.1|3020650_3021226_-|tRNA	peptidyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AWY85951.1|3021238_3021886_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
AWY85952.1|3022102_3022783_-	hypothetical protein	NA	NA	NA	NA	NA
AWY85953.1|3022818_3023799_-	ribose-phosphate pyrophosphokinase	NA	A0A1V0SHF7	Hokovirus	32.7	1.8e-44
AWY85954.1|3023890_3025378_-	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	NA	NA	NA	NA	NA
AWY87462.1|3025632_3026226_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AWY85955.1|3026284_3029989_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
AWY87463.1|3029988_3030966_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
AWY85956.1|3031053_3031785_+	hypothetical protein	NA	NA	NA	NA	NA
AWY85957.1|3031881_3033171_+	enolase	NA	W6LP63	Streptococcus_phage	56.6	1.6e-133
AWY85958.1|3033175_3033862_+	septation inhibitor protein	NA	NA	NA	NA	NA
AWY87464.1|3033878_3034346_+	hypothetical protein	NA	NA	NA	NA	NA
AWY85959.1|3034336_3035296_+	exopolyphosphatase	NA	NA	NA	NA	NA
AWY85960.1|3035535_3035748_+	hypothetical protein	NA	NA	NA	NA	NA
AWY85961.1|3035744_3036425_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	30.6	4.2e-24
AWY85962.1|3036421_3039004_-	sensor histidine kinase	NA	NA	NA	NA	NA
AWY85963.1|3039094_3039241_+	potassium transporter Trk	NA	NA	NA	NA	NA
AWY87465.1|3039237_3039330_+	K+-transporting ATPase subunit F	NA	NA	NA	NA	NA
AWY85964.1|3039329_3041045_+	potassium-transporting ATPase A chain	NA	NA	NA	NA	NA
AWY85965.1|3041041_3043171_+	potassium-transporting ATPase B chain	NA	M1HRW9	Paramecium_bursaria_Chlorella_virus	26.2	3.8e-23
AWY85966.1|3043170_3043740_+	potassium-transporting ATPase C chain	NA	NA	NA	NA	NA
AWY85967.1|3043743_3045273_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AWY85968.1|3045280_3046054_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.3	2.3e-34
AWY85969.1|3047861_3048146_-	ESAT-6-like protein EsxI	NA	NA	NA	NA	NA
AWY85970.1|3048172_3048469_-	WXG100 family type VII secretion target	NA	NA	NA	NA	NA
AWY85971.1|3048614_3049790_-	PPE family protein	NA	NA	NA	NA	NA
AWY85972.1|3049866_3050694_-	PE family protein	NA	NA	NA	NA	NA
AWY85973.1|3051254_3051503_+	hypothetical protein	NA	NA	NA	NA	NA
AWY85974.1|3051481_3051721_-	hypothetical protein	NA	NA	NA	NA	NA
AWY85975.1|3051626_3051845_-	hypothetical protein	NA	NA	NA	NA	NA
AWY85976.1|3051889_3052753_-|transposase	IS5 family transposase	transposase	A0A1V0SLQ8	Klosneuvirus	28.7	1.1e-05
AWY87466.1|3053099_3054125_-|protease	serine protease	protease	NA	NA	NA	NA
AWY85977.1|3054371_3054995_+	hypothetical protein	NA	NA	NA	NA	NA
AWY85978.1|3055953_3056742_-	hypothetical protein	NA	NA	NA	NA	NA
AWY85979.1|3056741_3057989_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	45.1	3.1e-81
AWY85980.1|3058356_3059472_-	hypothetical protein	NA	NA	NA	NA	NA
AWY85981.1|3059428_3059632_-	hypothetical protein	NA	NA	NA	NA	NA
AWY85982.1|3059704_3060151_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AWY87467.1|3060199_3061105_+	oxidoreductase	NA	NA	NA	NA	NA
AWY85983.1|3061263_3062019_-	hypothetical protein	NA	NA	NA	NA	NA
AWY87468.1|3062313_3062940_-	hypothetical protein	NA	NA	NA	NA	NA
AWY87469.1|3063106_3063943_-|transposase	transposase	transposase	Q8W6R2	Burkholderia_virus	59.0	2.9e-83
AWY85984.1|3064041_3064368_-	hypothetical protein	NA	A0A1B3AZF8	Gordonia_phage	46.1	4.4e-16
AWY85985.1|3065242_3065581_+|integrase	integrase	integrase	NA	NA	NA	NA
AWY87470.1|3065604_3065919_+|integrase	integrase	integrase	Q854H9	Mycobacterium_phage	53.6	1.0e-09
3070999:3071015	attR	CGAGCAGACGCAAAATC	NA	NA	NA	NA
