assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003286995.1_ASM328699v1	CP030269	Klebsiella pneumoniae subsp. pneumoniae strain SC-7 chromosome, complete genome	1	405050-405688	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	DEDDh,DinG,cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,WYL,RT	Type I-E	GTCTTCCCCACACGCGTGGGGGTGTTTC,GTCTTCCCCACACGCGTGGGGGTGTTTC,GTCTTCCCCACACGCGTGGGGGTGTTTC	28,28,28	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	7,10,10	10	TypeI-E	DEDDh,DinG,cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,WYL,RT	NA|79aa|up_3|CP030269.1_400547_400784_+,NA|60aa|down_0|CP030269.1_405866_406046_+	NA|411aa|up_9|CP030269.1_391978_393211_-	PRK15403, PRK15403, multidrug efflux MFS transporter MdtM	NA|145aa|up_8|CP030269.1_393776_394211_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|400aa|up_7|CP030269.1_394327_395527_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|386aa|up_6|CP030269.1_395822_396980_+	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|717aa|up_5|CP030269.1_397022_399173_-	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type	NA|360aa|up_4|CP030269.1_399420_400500_-	PRK10098, PRK10098, putative dehydrogenase; Provisional	NA|79aa|up_3|CP030269.1_400547_400784_+	NA	NA|363aa|up_2|CP030269.1_400802_401891_+	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|590aa|up_1|CP030269.1_401964_403734_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|357aa|up_0|CP030269.1_403726_404797_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|60aa|down_0|CP030269.1_405866_406046_+	NA	cas3|872aa|down_1|CP030269.1_406100_408716_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|508aa|down_2|CP030269.1_408719_410243_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|189aa|down_3|CP030269.1_410254_410821_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|216aa|down_4|CP030269.1_410813_411461_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|345aa|down_5|CP030269.1_411490_412525_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|232aa|down_6|CP030269.1_412558_413254_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|down_7|CP030269.1_413253_414129_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|down_8|CP030269.1_414106_414394_+	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	NA|372aa|down_9|CP030269.1_416598_417714_+	PHA02053, PHA02053, hypothetical protein
GCA_003286995.1_ASM328699v1	CP030269	Klebsiella pneumoniae subsp. pneumoniae strain SC-7 chromosome, complete genome	2	414442-416360	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	DEDDh,DinG,cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,WYL,RT	Type I-E	GTCTTCCCCACGCACGTGGGGGTGTTTC,GTCTTCCCCACGCACGTGGGGGTGTTTC,GTCTTCCCCACGCACGTGGGGGTGTTTC	28,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	31,31,31	31	TypeI-E	DEDDh,DinG,cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,WYL,RT	NA|60aa|up_8|CP030269.1_405866_406046_+,NA	NA|357aa|up_9|CP030269.1_403726_404797_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|60aa|up_8|CP030269.1_405866_406046_+	NA	cas3|872aa|up_7|CP030269.1_406100_408716_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|508aa|up_6|CP030269.1_408719_410243_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|189aa|up_5|CP030269.1_410254_410821_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|216aa|up_4|CP030269.1_410813_411461_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|345aa|up_3|CP030269.1_411490_412525_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|232aa|up_2|CP030269.1_412558_413254_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|up_1|CP030269.1_413253_414129_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|up_0|CP030269.1_414106_414394_+	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	NA|372aa|down_0|CP030269.1_416598_417714_+	PHA02053, PHA02053, hypothetical protein	NA|228aa|down_1|CP030269.1_417724_418408_+	pfam16277, DUF4926, Domain of unknown function (DUF4926)	NA|124aa|down_2|CP030269.1_418468_418840_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|251aa|down_3|CP030269.1_419344_420097_+	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3	NA|595aa|down_4|CP030269.1_420099_421884_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|446aa|down_5|CP030269.1_421897_423235_+	pfam00034, Cytochrom_C, Cytochrome c	NA|208aa|down_6|CP030269.1_423318_423942_+	PRK13538, PRK13538, cytochrome c biogenesis heme-transporting ATPase CcmA	NA|220aa|down_7|CP030269.1_423938_424598_+	TIGR01190, Heme_exporter_protein_B, heme exporter protein CcmB	NA|246aa|down_8|CP030269.1_424647_425385_+	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|77aa|down_9|CP030269.1_425381_425612_+	COG3114, CcmD, Heme exporter protein D [Intracellular trafficking and secretion]
GCA_003286995.1_ASM328699v1	CP030269	Klebsiella pneumoniae subsp. pneumoniae strain SC-7 chromosome, complete genome	3	2392380-2392519	3	CRISPRCasFinder	no	DEDDh	DEDDh,DinG,cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,WYL,RT	Unclear	TGCCGGGTGGCGGCTGGCGCCTTACCCGGCCTACAAAACTGAAGCAGCAG	50	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3,WYL,RT	NA,NA|70aa|down_7|CP030269.1_2398563_2398773_+	NA|428aa|up_9|CP030269.1_2382128_2383412_+	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase	NA|467aa|up_8|CP030269.1_2383547_2384948_+	PRK10197, PRK10197, GABA permease	NA|231aa|up_7|CP030269.1_2384993_2385686_+	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional	NA|133aa|up_6|CP030269.1_2385771_2386170_-	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|415aa|up_5|CP030269.1_2386227_2387472_-	PRK05077, frsA, esterase FrsA	NA|153aa|up_4|CP030269.1_2387577_2388036_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|up_3|CP030269.1_2388293_2389751_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|151aa|up_2|CP030269.1_2389793_2390246_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|352aa|up_1|CP030269.1_2390248_2391304_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|287aa|up_0|CP030269.1_2391463_2392324_+	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins	NA|72aa|down_0|CP030269.1_2392546_2392762_-	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown]	NA|408aa|down_1|CP030269.1_2392764_2393988_-	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional	NA|199aa|down_2|CP030269.1_2394000_2394597_-	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|213aa|down_3|CP030269.1_2394603_2395242_-	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|265aa|down_4|CP030269.1_2395234_2396029_-	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|413aa|down_5|CP030269.1_2396021_2397260_-	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|448aa|down_6|CP030269.1_2397263_2398607_-	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|70aa|down_7|CP030269.1_2398563_2398773_+	NA	NA|247aa|down_8|CP030269.1_2399018_2399759_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_9|CP030269.1_2399729_2400497_-	pfam13230, GATase_4, Glutamine amidotransferases class-II
