The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	35339	78798	2921067	integrase,transposase	Staphylococcus_phage(50.0%)	49	35280:35296	75565:75581
35280:35296	attL	AGGTTCTGTTGCAAAGT	NA	NA	NA	NA
AWQ95430.1|35339_36014_-|transposase	transposase IS66 family protein	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
AWQ93824.1|36271_36439_+	HMG-CoA synthase domain protein	NA	NA	NA	NA	NA
AWQ93585.1|37275_38019_+	glycerophosphoryl diester phosphodiesterase family protein	NA	NA	NA	NA	NA
AWQ95682.1|38115_38544_+	maoC like domain protein	NA	NA	NA	NA	NA
AWQ93910.1|38589_40596_-	penicillin-binding protein 2'	NA	NA	NA	NA	NA
AWQ94783.1|40695_41682_+	peptidase M48 family protein	NA	NA	NA	NA	NA
AWQ93071.1|41644_41914_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ94416.1|41904_43428_-|transposase	transposase DDE domain protein	transposase	A0ZS58	Staphylococcus_virus	75.2	1.6e-209
AWQ95010.1|43563_44070_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94140.1|44084_44396_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94820.1|44482_44833_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94089.1|45354_46983_-	ogr/Delta-like zinc finger family protein	NA	A0A0S2SXR4	Bacillus_phage	31.4	5.4e-46
AWQ93265.1|47004_48354_-	recombinase family protein	NA	Q9T200	Bacillus_phage	24.8	1.4e-18
AWQ94231.1|48587_50375_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ95030.1|50374_50665_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ93012.1|50803_51853_+	putative actin depolymerizing protein	NA	NA	NA	NA	NA
AWQ93532.1|52470_53961_+	divergent AAA domain protein	NA	NA	NA	NA	NA
AWQ95583.1|54333_54507_-	putative rhodanese-like protein	NA	NA	NA	NA	NA
AWQ93353.1|54584_55589_-	metallo-beta-lactamase superfamily protein	NA	NA	NA	NA	NA
AWQ94609.1|55707_55845_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ93076.1|55841_56213_+	HNH endonuclease family protein	NA	NA	NA	NA	NA
AWQ95745.1|56341_56962_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ94751.1|57878_58049_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94921.1|58450_59416_+	HNH endonuclease family protein	NA	NA	NA	NA	NA
AWQ94150.1|59512_59704_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ94856.1|59795_60125_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ94349.1|60201_60561_-	tic20-like family protein	NA	NA	NA	NA	NA
AWQ94702.1|61131_61941_-|integrase	integrase core domain protein	integrase	A0A0N9SIX5	Staphylococcus_phage	94.8	6.4e-56
AWQ95563.1|61959_62142_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ94722.1|62452_62950_-	acetyltransferase family protein	NA	NA	NA	NA	NA
AWQ93205.1|63137_63266_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ93440.1|63447_64575_+	alcohol dehydrogenase GroES-like domain protein	NA	A0A2K9L7I1	Tupanvirus	30.9	6.9e-16
AWQ95503.1|64829_65054_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ93146.1|65067_65571_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94401.1|65586_65898_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ93553.1|65984_66335_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ93874.1|67318_68143_+|integrase	integrase core domain protein	integrase	A0A0N9SIX5	Staphylococcus_phage	89.4	2.9e-64
AWQ95516.1|68242_69172_-	carbamate kinase	NA	NA	NA	NA	NA
AWQ95260.1|69191_70190_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
AWQ95661.1|70227_70917_-	HTH-type transcriptional regulator ArcR	NA	NA	NA	NA	NA
AWQ94816.1|70958_72380_-	arginine-ornithine antiporter	NA	NA	NA	NA	NA
AWQ94275.1|72465_73701_-	arginine deiminase	NA	NA	NA	NA	NA
AWQ94914.1|73969_74416_-	arginine repressor, C-terminal domain protein	NA	NA	NA	NA	NA
AWQ95744.1|74917_75349_+	universal stress family protein	NA	NA	NA	NA	NA
AWQ93436.1|75425_75578_-	putative cadmium-transporting ATPase domain protein	NA	NA	NA	NA	NA
AWQ93314.1|75621_75867_+|transposase	putative transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.5	1.9e-32
75565:75581	attR	AGGTTCTGTTGCAAAGT	NA	NA	NA	NA
AWQ93587.1|75929_76295_+	DDE domain protein	NA	A0A0N9RU54	Staphylococcus_phage	95.9	1.3e-61
AWQ95360.1|76482_77298_+	alpha/beta hydrolase fold family protein	NA	NA	NA	NA	NA
AWQ95475.1|77784_78798_+|transposase	transposase IS116/IS110/IS902 family protein	transposase	A0A1X9I619	Streptococcus_phage	38.0	6.0e-51
>prophage 2
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	783891	791711	2921067		Hokovirus(16.67%)	10	NA	NA
AWQ95058.1|783891_784947_-	histidine protein kinase SaeS	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
AWQ93237.1|784946_785633_-	response regulator	NA	NA	NA	NA	NA
AWQ94003.1|785607_786081_-	doxX family protein	NA	NA	NA	NA	NA
AWQ93891.1|786422_786863_-	electron transfer DM13 family protein	NA	NA	NA	NA	NA
AWQ93836.1|787142_787727_-	putative membrane protein	NA	NA	NA	NA	NA
AWQ93234.1|787825_788539_-	7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
AWQ94590.1|788542_788962_-	queuosine biosynthesis protein QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
AWQ93557.1|788963_789632_-	queuosine biosynthesis protein QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
AWQ94599.1|789982_790576_+	glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
AWQ95166.1|790559_791711_+	chorismate binding enzyme family protein	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 3
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	803683	818414	2921067		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
AWQ94217.1|803683_804742_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
AWQ94182.1|805092_805635_+	putative 5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AWQ95739.1|806258_807176_-	putative lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
AWQ95108.1|807445_808951_-	H+ symporter family protein	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AWQ93751.1|809291_809792_-	7-cyano-7-deazaguanine reductase	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
AWQ95352.1|809811_810678_-	eamA-like transporter family protein	NA	NA	NA	NA	NA
AWQ93980.1|811478_811877_+	nrdI protein	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
AWQ95456.1|811839_813945_+	ribonucleoside-diphosphate reductase, alpha subunit	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AWQ94197.1|814062_815034_+	ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AWQ94680.1|815741_816713_+	fecCD transport family protein	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
AWQ95183.1|816699_817656_+	fecCD transport family protein	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AWQ93451.1|817652_818414_+	ABC transporter family protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 4
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	897124	964377	2921067	tail,terminase,holin,capsid,head,portal,integrase	Staphylococcus_phage(61.63%)	95	921092:921151	964850:964939
AWQ93049.1|897124_898150_+	methionine import ATP-binding protein MetN 2	NA	G9BWD6	Planktothrix_phage	36.8	1.2e-27
AWQ95480.1|898184_898838_+	methionine import system permease protein MetP	NA	NA	NA	NA	NA
AWQ93778.1|898855_899677_+	NLPA lipofamily protein	NA	NA	NA	NA	NA
AWQ94670.1|899819_901040_-|integrase	phage integrase family protein	integrase	Q4ZE80	Staphylococcus_phage	47.5	2.9e-100
AWQ94458.1|901127_901856_-	toxin beta-grasp domain protein	NA	A0EX09	Staphylococcus_phage	31.8	1.2e-21
AWQ95683.1|901879_902608_-	toxin beta-grasp domain protein	NA	A0EX09	Staphylococcus_phage	34.1	1.6e-26
AWQ95339.1|902624_903083_-	hypothetical protein	NA	A0A2I6PEK4	Staphylococcus_phage	82.1	4.3e-65
AWQ93989.1|903094_903427_-	helix-turn-helix family protein	NA	A0A1J0MFC1	Staphylococcus_phage	74.5	1.6e-37
AWQ93188.1|903619_903883_+	helix-turn-helix family protein	NA	A0A2H4J9X2	uncultured_Caudovirales_phage	94.8	4.1e-36
AWQ95027.1|903875_904148_+	putative pathogenicity island DNA-binding protein	NA	Q4ZE77	Staphylococcus_phage	88.9	4.8e-40
AWQ93206.1|904159_904333_+	pathogenicity island family protein	NA	NA	NA	NA	NA
AWQ94885.1|904299_904503_+	putative pathogenicity island protein	NA	A0A1W6JQF4	Staphylococcus_phage	98.5	2.0e-30
AWQ95286.1|904504_904888_+	putative pathogenicity island protein	NA	A0A1W6JQI7	Staphylococcus_phage	96.9	4.4e-63
AWQ94761.1|904888_905137_+	hypothetical protein	NA	Q4ZE75	Staphylococcus_phage	58.6	1.4e-22
AWQ94036.1|905228_907601_+	phage/plasmid primase, P4 family, C-terminal domain protein	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	39.3	9.8e-137
AWQ94634.1|908271_908616_+	putative interference protein with phage growth	NA	A0A1W6JQD5	Staphylococcus_phage	65.2	9.4e-41
AWQ94789.1|908840_909047_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ94310.1|909033_910092_+|capsid	phage capsid family protein	capsid	A0A0K2CZ99	Paenibacillus_phage	26.6	3.6e-14
AWQ94335.1|910275_910767_+|terminase	putative terminase small subunit	terminase	A0A2H4JB26	uncultured_Caudovirales_phage	40.5	7.9e-25
AWQ93933.1|911195_912164_+	abi-like family protein	NA	A0A0H4U080	Erysipelothrix_phage	27.3	5.9e-24
AWQ93858.1|912398_912953_-	putative penicillin binding protein	NA	A0A1W6JQE5	Staphylococcus_phage	76.1	4.8e-71
AWQ94704.1|913986_914181_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ94028.1|914413_915265_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94917.1|915592_916354_+	feS assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
AWQ95576.1|916451_917759_+	feS assembly protein SufD	NA	NA	NA	NA	NA
AWQ93732.1|917873_919115_+	putative cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.5	1.1e-110
AWQ95393.1|919104_919569_+	SUF system FeS assembly protein, NifU family	NA	NA	NA	NA	NA
AWQ93544.1|919719_921117_+	feS assembly protein SufB	NA	NA	NA	NA	NA
921092:921151	attL	TCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTC	NA	NA	NA	NA
AWQ94540.1|921184_922234_-|integrase	phage integrase family protein	integrase	A0A0F6N3M4	Staphylococcus_phage	100.0	9.1e-204
AWQ94004.1|922295_922811_-	hypothetical protein	NA	I1W624	Staphylococcus_phage	100.0	1.5e-37
AWQ95041.1|922814_923315_-	hypothetical protein	NA	B7T094	Staphylococcus_virus	99.4	2.6e-71
AWQ93415.1|923367_923553_-	hypothetical protein	NA	E9LT71	Staphylococcus_phage	100.0	4.3e-24
AWQ93186.1|923613_923799_-	hypothetical protein	NA	Q9G041	Staphylococcus_virus	98.4	5.1e-25
AWQ95569.1|923795_923942_-	hypothetical protein	NA	U5U441	Staphylococcus_phage	100.0	4.3e-19
AWQ94472.1|923953_924664_-	helix-turn-helix family protein	NA	Q9MBT4	Staphylococcus_prophage	100.0	2.6e-130
AWQ93100.1|924834_925074_+	helix-turn-helix family protein	NA	Q9MBT3	Staphylococcus_prophage	100.0	8.0e-39
AWQ93245.1|925086_925530_+	putative phage transcriptional regulator	NA	A0A0H3U2S6	Staphylococcus_phage	99.3	2.0e-75
AWQ95297.1|925544_925688_+	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
AWQ93640.1|925677_925887_-	hypothetical protein	NA	W5R9J5	Staphylococcus_phage	100.0	1.2e-30
AWQ95135.1|925943_926657_+	hypothetical protein	NA	A0A059T7N7	Staphylococcus_phage	97.9	2.6e-125
AWQ95050.1|927011_927272_+	hypothetical protein	NA	A9CR59	Staphylococcus_phage	98.8	9.9e-43
AWQ94470.1|927286_927766_+	siphovirus Gp157 family protein	NA	Q9MBS3	Staphylococcus_prophage	100.0	8.1e-83
AWQ95566.1|927765_928404_+	ERF superfamily protein	NA	Q9MBS2	Staphylococcus_prophage	100.0	1.7e-115
AWQ95026.1|928403_928832_+	single-stranded DNA-binding protein ssb	NA	A0A2H4JHI1	uncultured_Caudovirales_phage	93.0	1.2e-53
AWQ94328.1|928845_929520_+	hypothetical protein	NA	Q4ZD97	Staphylococcus_virus	100.0	2.8e-129
AWQ95676.1|929625_930483_-	hypothetical protein	NA	Q4ZBL8	Staphylococcus_phage	100.0	9.5e-159
AWQ93087.1|930547_931303_+	conserved phage family protein	NA	W5R8N2	Staphylococcus_phage	98.0	2.6e-115
AWQ95617.1|931312_932092_+	AAA domain family protein	NA	W5RAN3	Staphylococcus_phage	100.0	1.2e-144
AWQ93390.1|932085_932247_+	hypothetical protein	NA	D2JGK6	Staphylococcus_phage	100.0	4.5e-22
AWQ93895.1|932259_932481_+	hypothetical protein	NA	A7TWN4	Staphylococcus_phage	100.0	1.3e-35
AWQ93371.1|932491_932896_+	hypothetical protein	NA	A7TWN5	Staphylococcus_phage	100.0	7.1e-72
AWQ95144.1|932900_933086_+	hypothetical protein	NA	A0A068A236	Staphylococcus_phage	95.1	7.8e-26
AWQ95149.1|933086_933272_+	PVL ORF-50-like family protein	NA	R4II61	Staphylococcus_phage	100.0	1.5e-29
AWQ95035.1|933272_933449_+	PVL ORF-50-like family protein	NA	B7T0B4	Staphylococcus_virus	87.9	1.1e-21
AWQ95055.1|933448_933703_+	hypothetical protein	NA	Q6R831	Staphylococcus_virus	100.0	1.3e-42
AWQ93379.1|933708_933951_+	phage family protein	NA	A0A2K9VBX5	Staphylococcus_phage	100.0	1.1e-40
AWQ93549.1|933964_934369_+	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	98.5	1.2e-71
AWQ93603.1|934365_934713_+	yopX family protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
AWQ95749.1|935010_935259_+	hypothetical protein	NA	A0A2K9VBU0	Staphylococcus_phage	97.6	1.6e-37
AWQ93944.1|935251_935782_+	dUTPase family protein	NA	I1W653	Staphylococcus_phage	98.3	3.5e-95
AWQ94322.1|935818_936106_+	hypothetical protein	NA	Q4ZAB6	Staphylococcus_virus	96.8	4.4e-44
AWQ94311.1|936098_936335_+	hypothetical protein	NA	A0A2I6PEM4	Staphylococcus_phage	94.9	2.0e-34
AWQ93122.1|936327_936714_+	hypothetical protein	NA	Q4ZBK1	Staphylococcus_phage	91.4	1.6e-60
AWQ95403.1|936710_936884_+	transcriptional activator RinB family protein	NA	A9CR97	Staphylococcus_phage	98.2	7.5e-23
AWQ93570.1|936884_937031_+	hypothetical protein	NA	A0A059T5A8	Staphylococcus_phage	100.0	2.2e-15
AWQ95412.1|937054_937477_+	phage transcriptional regulator, RinA family protein	NA	A0A0F6N3E5	Staphylococcus_phage	100.0	1.2e-74
AWQ95450.1|937664_938159_+|terminase	terminase small subunit	terminase	A0A0F6N3K6	Staphylococcus_phage	99.4	2.3e-88
AWQ93120.1|938161_939457_+|terminase	phage terminase, large subunit, PBSX family	terminase	A0A0F6N3L3	Staphylococcus_phage	99.3	2.8e-255
AWQ94615.1|939467_941003_+|portal	phage portal protein, SPP1 family	portal	A1KX25	Staphylococcus_virus	99.2	4.6e-289
AWQ93510.1|941009_942005_+|head	phage head morphogenesis, SPP1 gp7 family domain protein	head	E0Y3K7	Staphylococcus_virus	98.5	4.2e-182
AWQ94527.1|942077_942248_+	hypothetical protein	NA	Q4ZDF2	Staphylococcus_virus	100.0	3.3e-23
AWQ95523.1|942382_942997_+	hypothetical protein	NA	I1W646	Staphylococcus_phage	100.0	2.9e-40
AWQ94407.1|943010_943985_+|capsid	phage major capsid protein, HK97 family	capsid	Q4ZDM8	Staphylococcus_virus	100.0	2.2e-183
AWQ93341.1|944006_944294_+	hypothetical protein	NA	Q8SDU4	Staphylococcus_phage	98.9	1.4e-45
AWQ94991.1|944302_944635_+|head,tail	phage gp6-like head-tail connector family protein	head,tail	E0Y3L2	Staphylococcus_virus	99.1	1.6e-53
AWQ94949.1|944933_945281_+	hypothetical protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
AWQ95409.1|945292_945676_+	hypothetical protein	NA	E0Y3L5	Staphylococcus_virus	97.6	1.7e-67
AWQ93616.1|945694_946276_+|tail	phage major tail protein, TP901-1 family	tail	A0A0F6N3L8	Staphylococcus_phage	99.5	2.4e-105
AWQ94501.1|946338_946704_+	phage family protein	NA	A0A0F6N4J9	Staphylococcus_phage	100.0	3.6e-59
AWQ94838.1|946733_947078_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
AWQ93716.1|947094_950562_+	putative membrane protein	NA	Q4ZDU6	Staphylococcus_virus	97.7	9.8e-271
AWQ94282.1|950574_951522_+|tail	phage tail family protein	tail	I1W635	Staphylococcus_phage	99.7	4.7e-183
AWQ94050.1|951530_953432_+|tail	prophage endopeptidase tail family protein	tail	Q4ZDD8	Staphylococcus_virus	99.8	0.0e+00
AWQ95384.1|953446_955357_+	putative minor structural protein	NA	A0EWM6	Staphylococcus_virus	100.0	0.0e+00
AWQ93832.1|955356_957180_+	hypothetical protein	NA	Q4ZBH7	Staphylococcus_virus	99.8	0.0e+00
AWQ95738.1|957179_957557_+	hypothetical protein	NA	A0A0F6N3G4	Staphylococcus_phage	100.0	1.5e-60
AWQ95453.1|957559_957733_+	hypothetical protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
AWQ95618.1|957773_958073_+	hypothetical protein	NA	A0A0F6N3M6	Staphylococcus_phage	99.0	1.3e-46
AWQ95187.1|958209_960108_+	CHAP domain protein	NA	E0Y3M7	Staphylococcus_virus	99.7	0.0e+00
AWQ93758.1|960120_961293_+	hypothetical protein	NA	A0EWN2	Staphylococcus_virus	100.0	8.4e-198
AWQ93983.1|961298_961694_+	hypothetical protein	NA	Q4ZBP5	Staphylococcus_phage	100.0	2.7e-68
AWQ93747.1|961749_962187_+|holin	holin, phage phi LC3 family	holin	A0EWV0	Staphylococcus_virus	99.3	2.0e-72
AWQ94013.1|962167_963613_+	CHAP domain protein	NA	A0EWV1	Staphylococcus_virus	99.2	3.4e-294
AWQ93291.1|963880_964009_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	1.1e-15
AWQ95707.1|964191_964377_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
964850:964939	attR	TCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATAC	NA	NA	NA	NA
>prophage 5
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	1121027	1129500	2921067		Synechococcus_phage(33.33%)	9	NA	NA
AWQ93193.1|1121027_1121510_+	phosphoribosylaminoimidazole carboxylase, catalytic subunit	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
AWQ94682.1|1121496_1122621_+	N5-carboxyaminoimidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AWQ93901.1|1122624_1123329_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
AWQ93620.1|1123328_1123592_+	phosphoribosylformylglycinamidine synthase, purS protein	NA	NA	NA	NA	NA
AWQ93267.1|1123593_1124265_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
AWQ93217.1|1124257_1126447_+	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
AWQ94640.1|1126425_1127910_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
AWQ93005.1|1127902_1128931_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
AWQ93718.1|1128933_1129500_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 6
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	1386197	1392241	2921067	head	Staphylococcus_phage(66.67%)	10	NA	NA
AWQ94744.1|1386197_1386395_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	48.4	1.7e-10
AWQ95605.1|1387095_1387308_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	71.0	3.1e-18
AWQ93900.1|1387601_1387808_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
AWQ93112.1|1389046_1389232_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
AWQ93095.1|1389976_1390228_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ94496.1|1390273_1390858_+|head	phage head morphogenesis, SPP1 gp7 family domain protein	head	Q4ZE35	Staphylococcus_virus	72.0	2.0e-30
AWQ94596.1|1390978_1391227_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ93132.1|1391653_1391770_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ95601.1|1391778_1391904_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ93643.1|1392106_1392241_+	hypothetical protein	NA	Q4ZE35	Staphylococcus_virus	76.2	2.9e-14
>prophage 7
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	1474448	1509497	2921067	lysis,transposase,protease	Staphylococcus_prophage(16.67%)	33	NA	NA
AWQ94531.1|1474448_1474745_+|transposase	transposase DDE domain protein	transposase	Q9MBP7	Staphylococcus_prophage	89.7	6.2e-41
AWQ93982.1|1474879_1475782_-	conserved virulence factor B	NA	NA	NA	NA	NA
AWQ95471.1|1475928_1477530_+	ABC transporter family protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
AWQ95289.1|1478389_1479595_+	aspartate kinase domain protein	NA	NA	NA	NA	NA
AWQ93004.1|1479658_1480648_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AWQ95482.1|1480649_1481537_+	dihydrodipicolinate synthase	NA	NA	NA	NA	NA
AWQ94478.1|1481533_1482256_+	dihydrodipicolinate reductase	NA	NA	NA	NA	NA
AWQ93978.1|1482282_1483002_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA	NA
AWQ94152.1|1483144_1484296_+	amidohydrolase family protein	NA	NA	NA	NA	NA
AWQ93094.1|1484300_1485386_+	alanine racemase 2	NA	NA	NA	NA	NA
AWQ95210.1|1485375_1486641_+	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
AWQ93717.1|1486880_1487282_-	putative membrane protein	NA	NA	NA	NA	NA
AWQ95700.1|1487478_1487679_-	cold shock protein CspA	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
AWQ94010.1|1487849_1488158_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ95069.1|1488320_1488590_+	acylphosphatase family protein	NA	NA	NA	NA	NA
AWQ93128.1|1488614_1489238_+|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
AWQ95592.1|1489269_1490406_+	telA-like protein	NA	A0A291I9K4	Lactobacillus_phage	28.3	7.4e-34
AWQ94357.1|1490461_1490644_-|transposase	putative transposase	transposase	Q9MBP7	Staphylococcus_prophage	88.3	5.1e-22
AWQ93498.1|1490673_1491066_-|transposase	transposase DDE domain protein	transposase	A0A146ICT8	Staphylococcus_phage	93.2	7.7e-15
AWQ95497.1|1491418_1492762_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
AWQ94216.1|1492986_1494873_-	cobalamin biosynthesis CobT VWA domain protein	NA	NA	NA	NA	NA
AWQ93233.1|1494886_1495678_-	ATPase associated with various cellular activities family protein	NA	R4TG24	Halovirus	28.2	2.1e-11
AWQ94530.1|1495858_1496062_-	putative hypothetical protein YozC	NA	NA	NA	NA	NA
AWQ93413.1|1496090_1496900_-	putative lactoylglutathione lyase	NA	NA	NA	NA	NA
AWQ94812.1|1497479_1498748_-	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
AWQ93403.1|1498761_1501560_-	oxoglutarate dehydrogenase (succinyl-transferring), E1 component	NA	NA	NA	NA	NA
AWQ95296.1|1501843_1503199_-	signal transduction histidine-protein kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
AWQ94899.1|1503195_1503855_-	response regulator	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
AWQ94287.1|1504768_1505254_+|transposase	transposase IS200 like family protein	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
AWQ94858.1|1505384_1505999_-	PAP2 superfamily protein	NA	NA	NA	NA	NA
AWQ94035.1|1506015_1507086_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
AWQ93599.1|1507097_1507607_-	acetyltransferase domain protein	NA	NA	NA	NA	NA
AWQ95001.1|1508006_1509497_-|protease	putative CtpA-like serine protease	protease	A0A0R6PIZ1	Moraxella_phage	30.5	2.3e-22
>prophage 8
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	1571273	1658409	2921067	tail,terminase,holin,tRNA,capsid,head,portal,integrase,protease	Staphylococcus_phage(83.12%)	105	1607636:1607656	1653529:1653549
AWQ93243.1|1571273_1572566_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
AWQ95080.1|1572887_1575581_-	hypothetical protein	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
AWQ95374.1|1575604_1576576_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AWQ94592.1|1576562_1577765_-|head	poly A polymerase head domain protein	head	H7BUW3	unidentified_phage	42.5	3.2e-35
AWQ95143.1|1577769_1578912_-	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
AWQ94538.1|1579152_1579470_-	mazG nucleotide pyrophosphohydrolase domain protein	NA	NA	NA	NA	NA
AWQ95754.1|1579806_1580505_-	neutral zinc metallopeptidase family protein	NA	NA	NA	NA	NA
AWQ93821.1|1580558_1581146_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94817.1|1581135_1581711_-	hypothetical protein	NA	G3MAV7	Bacillus_virus	27.2	2.7e-08
AWQ95586.1|1581724_1582969_-	TPR repeat family protein	NA	NA	NA	NA	NA
AWQ94805.1|1582975_1584274_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AWQ94735.1|1584283_1585348_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
AWQ94721.1|1585373_1586540_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	7.6e-34
AWQ95007.1|1587334_1587784_-	nucleoside diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
AWQ93896.1|1587875_1588835_-	heptaprenyl diphosphate synthase component 2	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
AWQ94607.1|1588836_1589562_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
AWQ95186.1|1589564_1590137_-	heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein	NA	NA	NA	NA	NA
AWQ93101.1|1590567_1590840_-	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
AWQ93810.1|1591010_1592009_-	NAD-dependent glycerol-3-phosphate dehydrogenase family protein	NA	NA	NA	NA	NA
AWQ93098.1|1592025_1593336_-	ribosome-associated GTPase EngA	NA	NA	NA	NA	NA
AWQ94085.1|1593557_1594733_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
AWQ94515.1|1595297_1595414_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94636.1|1595444_1596104_-	cytidylate kinase	NA	NA	NA	NA	NA
AWQ94719.1|1596180_1597149_+	asparaginase family protein	NA	NA	NA	NA	NA
AWQ93613.1|1597263_1598250_-	pyridine nucleotide-disulfide oxidoreductase family protein	NA	NA	NA	NA	NA
AWQ95446.1|1598410_1598527_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94798.1|1598651_1600112_-	elastin-binding protein EbpS	NA	NA	NA	NA	NA
AWQ94913.1|1600264_1601644_-	ATP-dependent DNA helicase, RecQ family protein	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
AWQ94762.1|1601633_1602587_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94556.1|1602694_1602943_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
AWQ94171.1|1603048_1603594_-	riboflavin transporter RibU	NA	NA	NA	NA	NA
AWQ93657.1|1603872_1603992_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ93562.1|1604190_1605105_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ95036.1|1605119_1605326_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94421.1|1605318_1606257_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94833.1|1606313_1607231_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ93230.1|1607321_1607507_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	1.7e-25
1607636:1607656	attL	AATCCGCCCTTTTTTTGCCCT	NA	NA	NA	NA
AWQ95022.1|1607755_1608733_-	lukF-PV	NA	A0A2I6PEU3	Staphylococcus_phage	100.0	7.5e-184
AWQ95580.1|1608734_1609673_-	gamma-hemolysin component C	NA	A0A2I6PER8	Staphylococcus_phage	100.0	3.7e-180
AWQ95550.1|1610062_1611517_-	N-acetylmuramoyl-L-alanine amidase family protein	NA	A0A2I6PET7	Staphylococcus_phage	100.0	5.7e-289
AWQ94359.1|1611527_1611830_-|holin	holin, SPP1 family	holin	A0A2I6PET6	Staphylococcus_phage	100.0	7.0e-48
AWQ93505.1|1611965_1612265_-	hypothetical protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AWQ94423.1|1612310_1612475_-	hypothetical protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AWQ93673.1|1612467_1612857_-	hypothetical protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
AWQ94101.1|1612856_1614323_-	hypothetical protein	NA	A0A2I6PES7	Staphylococcus_phage	100.0	1.5e-273
AWQ93724.1|1614322_1616233_-	putative minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
AWQ93080.1|1616248_1616539_-	putative phage protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
AWQ94162.1|1616538_1618122_-|tail	prophage endopeptidase tail family protein	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
AWQ94714.1|1618130_1618955_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
AWQ95585.1|1618954_1625155_-|tail	phage tail tape measure protein, TP901 family, core region	tail	A0A1X9IGU9	Staphylococcus_phage	99.7	0.0e+00
AWQ93274.1|1625168_1625327_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AWQ95227.1|1625368_1625719_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
AWQ94707.1|1625776_1626232_-	bacterial Ig-like domain family protein	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
AWQ94396.1|1626323_1626965_-|tail	phage major tail, phi13 family protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
AWQ95385.1|1626999_1627395_-	hypothetical protein	NA	A0A2I6PEQ4	Staphylococcus_phage	100.0	8.8e-67
AWQ94946.1|1627395_1627797_-	hypothetical protein	NA	A0A2I6PF54	Staphylococcus_phage	100.0	8.1e-68
AWQ95671.1|1627793_1628126_-	hypothetical protein	NA	A0A2I6PES3	Staphylococcus_phage	100.0	4.1e-57
AWQ94088.1|1628137_1628416_-|head,tail	phage gp6-like head-tail connector family protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
AWQ95091.1|1628484_1629648_-|capsid	phage major capsid protein, HK97 family	capsid	A0A2I6PEQ3	Staphylococcus_phage	100.0	1.2e-217
AWQ95199.1|1629659_1630433_-|protease	clp protease family protein	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
AWQ93750.1|1630416_1631655_-|portal	phage portal protein, HK97 family	portal	A0A2I6PER5	Staphylococcus_phage	100.0	6.9e-235
AWQ93823.1|1631659_1633351_-	phage Terminase family protein	NA	A0A1X9IGU0	Staphylococcus_phage	100.0	0.0e+00
AWQ95535.1|1633340_1633646_-|terminase	phage terminase, small subunit	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
AWQ95702.1|1633772_1634087_-	HNH endonuclease family protein	NA	A0A2I6PEN4	Staphylococcus_phage	100.0	5.0e-57
AWQ93531.1|1634243_1634681_-	phage transcriptional regulator, RinA family protein	NA	A0A2I6PEN3	Staphylococcus_phage	100.0	7.9e-77
AWQ94875.1|1634693_1636052_-	SNF2 family N-terminal domain protein	NA	A0A1X9IH01	Staphylococcus_phage	99.8	2.8e-261
AWQ93595.1|1636041_1636332_-	VRR-NUC domain protein	NA	A0A2I6PE31	Staphylococcus_phage	100.0	6.5e-51
AWQ95093.1|1636526_1636649_+	hypothetical protein	NA	Q4ZCF9	Staphylococcus_virus	95.0	6.9e-15
AWQ93993.1|1636672_1639120_-	virulence-associated E family protein	NA	A0A2I6PEP4	Staphylococcus_phage	100.0	0.0e+00
AWQ94628.1|1639407_1639608_-	hypothetical protein	NA	A0A2I6PEP5	Staphylococcus_phage	100.0	4.9e-26
AWQ93030.1|1639675_1639828_-	transcriptional activator RinB family protein	NA	A0A2I6PEM5	Staphylococcus_phage	100.0	2.0e-19
AWQ94403.1|1639824_1640211_-	hypothetical protein	NA	A0A1X9IGZ2	Staphylococcus_phage	100.0	3.0e-64
AWQ95621.1|1640203_1640440_-	hypothetical protein	NA	A0A2I6PEM4	Staphylococcus_phage	100.0	2.8e-36
AWQ95020.1|1640432_1640636_-	hypothetical protein	NA	A0A2I6PEQ8	Staphylococcus_phage	100.0	3.4e-30
AWQ95376.1|1640632_1640839_-	hypothetical protein	NA	A0A2I6PEM9	Staphylococcus_phage	100.0	1.6e-19
AWQ95207.1|1640875_1641412_-	dUTPase family protein	NA	A0A2I6PEN6	Staphylococcus_phage	100.0	1.6e-95
AWQ94593.1|1641404_1641653_-	hypothetical protein	NA	A0A2I6PEP2	Staphylococcus_phage	100.0	1.4e-38
AWQ95096.1|1641667_1641910_-	phage family protein	NA	A0A2I6PEV3	Staphylococcus_phage	100.0	1.5e-40
AWQ94988.1|1641924_1642125_-	hypothetical protein	NA	A0A2I6PEM3	Staphylococcus_phage	100.0	2.5e-30
AWQ95448.1|1642127_1642385_-	hypothetical protein	NA	A0A2I6PEN5	Staphylococcus_phage	100.0	2.6e-43
AWQ94788.1|1642384_1642786_-	PVL ORF-50-like family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
AWQ95174.1|1642785_1642971_-	hypothetical protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
AWQ95011.1|1642983_1644945_-	DNA polymerase A family protein	NA	A0A2I6PEL4	Staphylococcus_phage	100.0	0.0e+00
AWQ94633.1|1645003_1645561_-	hypothetical protein	NA	A0A2I6PEP8	Staphylococcus_phage	100.0	1.8e-97
AWQ93973.1|1645586_1646753_-	hypothetical protein	NA	A0A2I6PEL9	Staphylococcus_phage	100.0	1.4e-221
AWQ94614.1|1646749_1647112_-	hypothetical protein	NA	A0A2I6PEM7	Staphylococcus_phage	100.0	3.7e-56
AWQ94677.1|1647125_1647386_-	hypothetical protein	NA	A0A2I6PEM2	Staphylococcus_phage	100.0	3.4e-43
AWQ93849.1|1647390_1647693_-	hypothetical protein	NA	A0A1X9IGX2	Staphylococcus_phage	100.0	2.4e-48
AWQ93565.1|1647685_1648003_-	hypothetical protein	NA	A0A2I6PEL3	Staphylococcus_phage	100.0	1.1e-35
AWQ95148.1|1648268_1648532_-	homeo-like domain protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
AWQ93468.1|1648556_1648772_-	hypothetical protein	NA	A0A2I6PEK7	Staphylococcus_phage	100.0	1.0e-32
AWQ95045.1|1648839_1649058_+	hypothetical protein	NA	A0A2I6PE22	Staphylococcus_phage	98.6	9.2e-34
AWQ95323.1|1649054_1649231_-	hypothetical protein	NA	A0A2I6PEL1	Staphylococcus_phage	100.0	8.8e-27
AWQ94632.1|1649314_1649506_-	helix-turn-helix family protein	NA	A0A2I6PEL6	Staphylococcus_phage	100.0	2.3e-28
AWQ94268.1|1649666_1649996_+	bacteriophage CI repressor helix-turn-helix domain protein	NA	A0A2I6PEN2	Staphylococcus_phage	100.0	3.2e-54
AWQ94128.1|1650098_1650470_+	hypothetical protein	NA	A0A2I6PEK4	Staphylococcus_phage	99.2	1.6e-65
AWQ94471.1|1650487_1650922_+	putative translation initiation factor IF-2	NA	A0A2I6PEM0	Staphylococcus_phage	96.5	3.6e-21
AWQ93119.1|1650950_1651346_+	hypothetical protein	NA	A0A2I6PEJ7	Staphylococcus_phage	100.0	3.8e-70
AWQ93383.1|1651456_1651582_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	3.3e-12
AWQ95031.1|1651578_1652193_-	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
AWQ93458.1|1652318_1653524_+|integrase	phage integrase family protein	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
AWQ94621.1|1653566_1654721_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	97.7	3.9e-115
1653529:1653549	attR	AATCCGCCCTTTTTTTGCCCT	NA	NA	NA	NA
AWQ94526.1|1654747_1655593_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94510.1|1655585_1656455_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ95382.1|1656759_1658409_-	sensor protein SrrB	NA	A0A1V0SGX0	Hokovirus	33.6	1.6e-21
>prophage 9
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	1714342	1722647	2921067		Staphylococcus_phage(16.67%)	7	NA	NA
AWQ93776.1|1714342_1715128_-	ABC transporter family protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
AWQ94122.1|1715253_1716144_-	putative endonuclease 4	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
AWQ94007.1|1716153_1717500_-	DEAD/DEAH box helicase family protein	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
AWQ94481.1|1717613_1718714_-	NIF3 family protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
AWQ94520.1|1718716_1719394_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ93176.1|1719508_1720624_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
AWQ93439.1|1720847_1722647_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 10
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	1791784	1800827	2921067	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AWQ93416.1|1791784_1792303_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
AWQ95067.1|1792324_1794598_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
AWQ95043.1|1794800_1797080_-	protein-export membrane protein SecD	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AWQ95196.1|1797354_1797615_-	preprotein translocase, YajC subunit	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AWQ94630.1|1797633_1798773_-|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AWQ94916.1|1798795_1799821_-|tRNA	tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AWQ93653.1|1799822_1800827_-	holliday junction DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 11
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	1926283	2043363	2921067	bacteriocin,tRNA,transposase,protease	Staphylococcus_phage(86.76%)	106	NA	NA
AWQ93968.1|1926283_1932844_-	sasC/Mrp/FmtB intercellular aggregation domain protein	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	2.0e-304
AWQ94277.1|1933169_1933481_-	rhodanese-like domain protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
AWQ93269.1|1933502_1935917_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
AWQ93092.1|1936207_1937389_-	major Facilitator Superfamily protein	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
AWQ94191.1|1937498_1938452_+	radical SAM superfamily protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AWQ93220.1|1938448_1939012_+	rRNA methylase family protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
AWQ93555.1|1939131_1939533_-	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
AWQ93213.1|1940052_1940277_-	hypothetical protein	NA	Q9MBP7	Staphylococcus_prophage	81.8	4.5e-20
AWQ95411.1|1940273_1940765_-	hypothetical protein	NA	A0A146ICT8	Staphylococcus_phage	91.6	2.4e-74
AWQ94220.1|1941111_1941939_-	alpha/beta hydrolase family protein	NA	NA	NA	NA	NA
AWQ94123.1|1942172_1943174_+	proline dehydrogenase family protein	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
AWQ93727.1|1943295_1943760_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
AWQ93680.1|1943772_1944954_-	riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
AWQ95348.1|1944964_1945597_-	riboflavin synthase, alpha subunit	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
AWQ94270.1|1945603_1946647_-	riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	6.3e-197
AWQ95746.1|1947127_1948630_-	FAD-NAD(P)-binding family protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
AWQ93871.1|1949466_1950759_+	arsenite/antimonite efflux pump membrane family protein	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
AWQ95487.1|1950776_1951172_+	arsenate reductase	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
AWQ94166.1|1951466_1952321_-	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
AWQ94016.1|1952596_1952821_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ94931.1|1953019_1953490_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
AWQ93725.1|1953902_1954046_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ95542.1|1954032_1954476_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	84.4	8.6e-55
AWQ93437.1|1954771_1955407_+|protease	CAAX protease self-immunity family protein	protease	NA	NA	NA	NA
AWQ94227.1|1955846_1956560_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
AWQ94616.1|1956819_1957122_+	putative membrane protein	NA	NA	NA	NA	NA
AWQ94995.1|1957377_1957743_+	crcB-like family protein	NA	A0A2H4PQR0	Staphylococcus_phage	99.2	1.4e-58
AWQ95223.1|1957739_1958093_+	crcB-like family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
AWQ94494.1|1958647_1959472_+|transposase	transposase DDE domain protein	transposase	A0ZS58	Staphylococcus_virus	98.2	1.7e-125
AWQ94791.1|1959504_1960113_+|transposase	transposase DDE domain protein	transposase	A0ZS58	Staphylococcus_virus	96.0	1.3e-109
AWQ95300.1|1960175_1961009_-	aldo/keto reductase family protein	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
AWQ95341.1|1961220_1962129_-	nuclease-related domain protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
AWQ93770.1|1962253_1963447_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
AWQ93794.1|1963817_1965410_+	phosphoenolpyruvate carboxykinase	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
AWQ95529.1|1965545_1965908_-|transposase	transposase IS200 like family protein	transposase	A0A1P8BMC0	Lactococcus_phage	37.8	1.8e-10
AWQ94225.1|1966405_1967176_-	prolyl oligopeptidase family protein	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.3e-142
AWQ93729.1|1967156_1967636_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	1.5e-84
AWQ93827.1|1967695_1967953_+	putative membrane protein insertion efficiency factor	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AWQ94280.1|1967949_1968951_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
AWQ94749.1|1968955_1970434_-	O-succinylbenzoate-CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
AWQ94855.1|1970592_1971075_-	putative lipoprotein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	2.5e-79
AWQ93144.1|1971386_1972001_+	excalibur calcium-binding domain protein	NA	A0A2H4PQM8	Staphylococcus_phage	87.3	9.5e-36
AWQ95507.1|1972081_1973077_+	hypothetical protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
AWQ95668.1|1973152_1973308_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	96.9	4.7e-08
AWQ93663.1|1973308_1973779_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	80.1	7.0e-63
AWQ94202.1|1973819_1974164_+	hypothetical protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
AWQ93712.1|1974261_1974813_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
AWQ95189.1|1975030_1975600_-	hypothetical protein	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.3e-76
AWQ93276.1|1975785_1975971_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ93976.1|1975972_1976149_-	putative membrane protein	NA	NA	NA	NA	NA
AWQ94360.1|1976159_1976543_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ95039.1|1977146_1977290_-|transposase	transposase family protein	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
AWQ95213.1|1978159_1978537_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ95760.1|1979057_1983170_-	NACHT domain protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	0.0e+00
AWQ94410.1|1984019_1985219_-	type I restriction modification DNA specificity domain protein	NA	A0A2H4PQP5	Staphylococcus_phage	99.7	5.5e-229
AWQ94509.1|1985211_1986768_-	type I restriction-modification system, M subunit	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	2.3e-288
AWQ93791.1|1987130_1987850_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
AWQ94385.1|1988000_1988717_-|protease	serine protease SplF	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
AWQ94600.1|1988874_1989594_-|protease	serine protease SplF	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
AWQ94388.1|1989714_1990434_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
AWQ94024.1|1990491_1991214_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
AWQ93948.1|1991338_1992046_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
AWQ95054.1|1993009_1993576_+	hypothetical protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
AWQ93963.1|1994049_1994748_-	putative membrane protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
AWQ95078.1|1994744_1995506_-	lantibiotic protection ABC transporter permease subunit, MutE/EpiE family protein	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
AWQ93523.1|1995502_1996195_-	lantibiotic protection ABC transporter, ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
AWQ94234.1|1996217_1997591_-	subtilase family protein	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
AWQ94351.1|1997600_1998119_-	epidermin decarboxylase	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
AWQ95201.1|1998134_1999379_-	lanthionine synthetase C-like family protein	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
AWQ94205.1|1999371_2002365_-|bacteriocin	thiopeptide-type bacteriocin biosynthesis domain protein	bacteriocin	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
AWQ94504.1|2002429_2002573_-	lantibiotic gallidermin	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
AWQ94105.1|2003694_2004678_-	leucotoxin LukDv	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
AWQ95435.1|2004679_2005615_-	leucotoxin LukEv	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
AWQ95308.1|2006497_2006953_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	1.7e-61
AWQ93617.1|2006965_2007607_+	hypothetical protein	NA	A0A2H4PQI0	Staphylococcus_phage	94.8	1.1e-111
AWQ94147.1|2010209_2010764_-	serine hydrolase family protein	NA	NA	NA	NA	NA
AWQ95116.1|2011086_2012487_-	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
AWQ94958.1|2012510_2013434_-	ferrochelatase	NA	NA	NA	NA	NA
AWQ93315.1|2013491_2014529_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AWQ94130.1|2014791_2015295_+	signal transduction protein TRAP	NA	NA	NA	NA	NA
AWQ95598.1|2015418_2016642_-	bacterial ABC transporter EcsB family protein	NA	NA	NA	NA	NA
AWQ95490.1|2016634_2017375_-	ABC transporter family protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
AWQ93386.1|2017508_2017931_+	protein hit	NA	NA	NA	NA	NA
AWQ95658.1|2018072_2018438_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ95178.1|2019170_2019728_+	hypothetical protein	NA	NA	NA	NA	NA
AWQ93957.1|2019932_2020559_+	foldase protein PrsA	NA	NA	NA	NA	NA
AWQ95567.1|2020548_2020884_+	foldase protein PrsA 1	NA	NA	NA	NA	NA
AWQ95241.1|2021004_2021946_-	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
AWQ94543.1|2021942_2024879_-	AAA domain protein	NA	NA	NA	NA	NA
AWQ95266.1|2024868_2026065_-	calcineurin-like phosphoesterase superfamily domain protein	NA	NA	NA	NA	NA
AWQ94674.1|2026836_2027181_-	hypothetical protein	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
AWQ94365.1|2027249_2028374_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ95111.1|2028552_2029017_-	helix-turn-helix family protein	NA	NA	NA	NA	NA
AWQ95160.1|2029372_2029996_-	response regulator	NA	NA	NA	NA	NA
AWQ93621.1|2030017_2031130_-	histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein	NA	NA	NA	NA	NA
AWQ94998.1|2031292_2032114_+	RNA pseudouridylate synthase family protein	NA	NA	NA	NA	NA
AWQ93322.1|2032576_2033962_-	fumarate hydratase, class II	NA	NA	NA	NA	NA
AWQ94087.1|2034157_2034553_-	putative membrane protein	NA	NA	NA	NA	NA
AWQ94778.1|2035329_2035482_-	hypothetical protein	NA	NA	NA	NA	NA
AWQ93141.1|2035506_2036106_-	glucosamine-6-phosphate isomerase family protein	NA	NA	NA	NA	NA
AWQ95392.1|2036264_2036735_-|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
AWQ94451.1|2036739_2037867_-	epoxyqueuosine reductase	NA	NA	NA	NA	NA
AWQ94034.1|2038017_2038740_-	recF/RecN/SMC N terminal domain protein	NA	G9BWD6	Planktothrix_phage	42.7	1.3e-36
AWQ93266.1|2038732_2040190_-	amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein	NA	NA	NA	NA	NA
AWQ93575.1|2040447_2041509_-	phosphotransferase system, EIIC family protein	NA	NA	NA	NA	NA
AWQ93160.1|2042001_2043363_+|transposase	transposase family protein	transposase	NA	NA	NA	NA
>prophage 12
CP029678	Staphylococcus aureus strain AR_0216 chromosome, complete genome	2921067	2132742	2190981	2921067	tail,terminase,holin,capsid,head,portal,integrase,protease	Staphylococcus_phage(97.1%)	76	2152167:2152184	2177098:2177115
AWQ93025.1|2132742_2132940_+	phospholipase C domain protein	NA	A0A1P8L6A7	Staphylococcus_phage	100.0	3.4e-27
AWQ93850.1|2133311_2133491_+	putative membrane protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
AWQ93373.1|2133870_2134062_+	putative membrane protein	NA	M9NS66	Staphylococcus_phage	100.0	1.7e-23
AWQ95077.1|2134114_2134465_-	complement inhibitor	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
AWQ93784.1|2135149_2135599_+	chemotaxis inhibitory protein	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
AWQ93073.1|2135693_2135990_-	bacterial SH3 domain protein	NA	A0A1P8L6B4	Staphylococcus_phage	100.0	1.3e-51
AWQ94635.1|2136678_2137170_-	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
AWQ93252.1|2137360_2138116_-	CHAP domain protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
AWQ94806.1|2138127_2138382_-|holin	holin, phage phi LC3 family	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
AWQ94994.1|2138593_2138728_-	putative membrane protein	NA	D2JLG3	Staphylococcus_phage	100.0	9.3e-13
AWQ93155.1|2138919_2139216_-	hypothetical protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
AWQ95639.1|2139273_2139561_-	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
AWQ94106.1|2139607_2139760_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
AWQ94255.1|2139749_2143535_-	phage minor structural, N-terminal region domain protein	NA	A0A1X9H0H3	Staphylococcus_phage	98.5	0.0e+00
AWQ94075.1|2143550_2145035_-|tail	phage tail family protein	tail	A0A0H3U501	Staphylococcus_phage	100.0	2.0e-297
AWQ95190.1|2145031_2149561_-|tail	phage tail tape measure protein, TP901 family, core region	tail	A0A1X9H084	Staphylococcus_phage	95.0	0.0e+00
AWQ95229.1|2149617_2149752_-	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	9.6e-18
AWQ93818.1|2149805_2150156_-	hypothetical protein	NA	A0A0H3U503	Staphylococcus_phage	100.0	1.3e-58
AWQ93464.1|2150205_2150346_-	bacterial Ig-like domain family protein	NA	A0A2I6PDK6	Staphylococcus_phage	97.8	7.2e-16
AWQ93994.1|2150471_2151116_-|tail	phage major tail, phi13 family protein	tail	A0A0H3U4E6	Staphylococcus_phage	100.0	6.5e-120
AWQ94490.1|2151520_2151925_-	hypothetical protein	NA	A0A0H3U2V1	Staphylococcus_phage	100.0	8.7e-70
AWQ94567.1|2151921_2152284_-|head,tail	phage head-tail joining family protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
2152167:2152184	attL	ATAATTTTTCTTCTTTTT	NA	NA	NA	NA
AWQ95512.1|2152267_2152552_-|head,tail	phage gp6-like head-tail connector family protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
AWQ93610.1|2152541_2152826_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
AWQ94658.1|2152845_2153991_-|capsid	phage major capsid protein, HK97 family	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
AWQ93490.1|2154014_2154752_-|protease	clp protease family protein	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
AWQ93307.1|2154735_2155923_-|portal	phage portal protein, HK97 family	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
AWQ94557.1|2155938_2157600_-	phage Terminase family protein	NA	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
AWQ93686.1|2157596_2157941_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
AWQ93992.1|2158070_2158370_-	HNH endonuclease family protein	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
AWQ94133.1|2158601_2159018_-	phage transcriptional regulator, RinA family protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
AWQ95732.1|2159045_2159246_-	hypothetical protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
AWQ93472.1|2159245_2159395_-	transcriptional activator RinB family protein	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
AWQ95648.1|2159391_2159778_-	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
AWQ94347.1|2159774_2159981_-	hypothetical protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
AWQ95042.1|2159977_2160223_-	putative membrane protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
AWQ93796.1|2160259_2160793_-	dUTP diphosphatase family protein	NA	A0A0H3U2T1	Staphylococcus_phage	100.0	1.6e-95
AWQ94740.1|2160785_2161028_-	hypothetical protein	NA	A0A2I6PF40	Staphylococcus_phage	100.0	3.7e-36
AWQ95182.1|2161017_2161254_-	hypothetical protein	NA	A0A0H3U313	Staphylococcus_phage	100.0	5.3e-35
AWQ93300.1|2161246_2161612_-	acetyltransferase family protein	NA	A0A0H3U4X7	Staphylococcus_phage	96.4	1.1e-52
AWQ94918.1|2161626_2161791_-	phage family protein	NA	A0A0H3U4B0	Staphylococcus_phage	98.1	1.7e-24
AWQ94260.1|2161872_2162241_-	PVL ORF-50-like family protein	NA	A0A0H3U2T3	Staphylococcus_phage	100.0	2.0e-49
AWQ93200.1|2162253_2162658_-	endodeoxyribonuclease RusA family protein	NA	A0A0H3U2W2	Staphylococcus_phage	100.0	1.4e-72
AWQ94574.1|2162666_2162885_-	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
AWQ95557.1|2162891_2163785_-	dnaD domain protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
AWQ93789.1|2163814_2164285_-	single-stranded DNA-binding family protein	NA	A0A0H3U4B5	Staphylococcus_phage	100.0	4.4e-81
AWQ95708.1|2164285_2164771_-	beta-lactamase superfamily domain protein	NA	A0A0H3U2T4	Staphylococcus_phage	100.0	4.2e-87
AWQ95581.1|2164983_2165904_-	recombinase, phage RecT family protein	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
AWQ95325.1|2165905_2167849_-	AAA domain protein	NA	A0A2I6PDH3	Staphylococcus_phage	94.7	0.0e+00
AWQ93773.1|2168129_2168390_-	hypothetical protein	NA	A0A0H3U2T6	Staphylococcus_phage	100.0	6.8e-44
AWQ93816.1|2168429_2168690_-	hypothetical protein	NA	A0A0H3U2W4	Staphylococcus_phage	100.0	9.3e-41
AWQ93859.1|2168942_2169263_-	hypothetical protein	NA	A0A0H3U4C3	Staphylococcus_phage	100.0	1.5e-56
AWQ94170.1|2169333_2169552_+	putative phiSLT ORF78-like protein	NA	A0A0H3U2T9	Staphylococcus_phage	98.6	7.0e-34
AWQ94984.1|2169548_2169725_-	hypothetical protein	NA	A0A2I6PEL1	Staphylococcus_phage	100.0	8.8e-27
AWQ95419.1|2169740_2170493_-	phage antirepressor KilAC domain protein	NA	A0A0H3U319	Staphylococcus_phage	100.0	5.6e-139
AWQ93812.1|2170543_2170873_+	hypothetical protein	NA	A0A0H3U4Z1	Staphylococcus_phage	100.0	4.6e-53
AWQ94598.1|2171092_2171356_-	helix-turn-helix family protein	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
AWQ95085.1|2171488_2172202_+	peptidase S24-like family protein	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
AWQ95751.1|2172217_2173150_+	exonuclease family protein	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
AWQ93644.1|2173155_2173497_+	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
AWQ93521.1|2173700_2173883_+	hypothetical protein	NA	A0A0H3U4Z4	Staphylococcus_phage	100.0	4.1e-27
AWQ93127.1|2173960_2174674_+	pemK-like family protein	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
AWQ93387.1|2174864_2175902_+|integrase	integrase	integrase	A0A1X9H022	Staphylococcus_phage	99.7	3.8e-178
AWQ95659.1|2175958_2176783_+	sphingomyelin phosphodiesterase	NA	A0A1P8L6H7	Staphylococcus_phage	100.0	6.8e-162
AWQ94782.1|2177020_2178037_-	hypothetical protein	NA	A0A2I6PER8	Staphylococcus_phage	29.0	1.1e-25
2177098:2177115	attR	ATAATTTTTCTTCTTTTT	NA	NA	NA	NA
AWQ95461.1|2178058_2179114_-	hypothetical protein	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
AWQ93749.1|2179548_2180772_+	putative succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AWQ93954.1|2181143_2181989_-	leucine carboxyl methyltransferase family protein	NA	NA	NA	NA	NA
AWQ95218.1|2182050_2182962_-	periplasmic binding family protein	NA	NA	NA	NA	NA
AWQ94342.1|2183122_2184430_+	ktr system potassium uptake protein B	NA	NA	NA	NA	NA
AWQ94086.1|2185282_2185726_-	acetyltransferase family protein	NA	NA	NA	NA	NA
AWQ94261.1|2185890_2186232_-	putative membrane protein	NA	NA	NA	NA	NA
AWQ94242.1|2186585_2187176_-|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	95.8	1.1e-97
AWQ93294.1|2188086_2189703_-	chaperonin GroL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
AWQ93338.1|2189778_2190063_-	10 kDa chaperonin	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
AWQ93539.1|2190237_2190981_+|protease	CAAX protease self-immunity family protein	protease	NA	NA	NA	NA
>prophage 1
CP029677	Staphylococcus aureus strain AR_0216 plasmid unnamed2, complete sequence	27067	17994	26421	27067	transposase	Staphylococcus_phage(37.5%)	10	NA	NA
AWQ92979.1|17994_18573_+	resolvase, N terminal domain protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.7	4.9e-42
AWQ92976.1|19242_19917_+|transposase	transposase IS66 family protein	transposase	A0A0N9SKD3	Staphylococcus_phage	99.6	6.8e-128
AWQ92993.1|20085_20451_-	WYL domain protein	NA	E4ZFP5	Streptococcus_phage	100.0	1.9e-63
AWQ92977.1|20932_21727_-	aminoglycoside 3'-phosphotransferase	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
AWQ92999.1|21819_22350_-	acetyltransferase family protein	NA	A0A1B0RXL7	Streptococcus_phage	97.8	1.3e-89
AWQ93002.1|23122_23797_-	DDE domain protein	NA	A0A0N9SKD3	Staphylococcus_phage	98.7	2.6e-127
AWQ92989.1|23826_24030_-	bacitracin resistance BacA family protein	NA	NA	NA	NA	NA
AWQ92987.1|24043_24733_-	ABC-2 transporter family protein	NA	NA	NA	NA	NA
AWQ92990.1|24773_25694_-	ABC transporter family protein	NA	A0A2H4PQG7	Staphylococcus_phage	42.2	1.0e-41
AWQ92986.1|25818_26421_-	histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein	NA	Q6XLV6	Feldmannia_irregularis_virus	29.6	2.8e-08
