bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	1.1|214888|33|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	96.97	33	1	0	1	33	549974	550006	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-08	50.7	1.0	CAGAAGCTGACGAAAAGTCAGCTTACGATAATG	549974-550006	CAGAAGCTGACGAAAAGTCAGCTTACTATAATG	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	1.1|214888|33|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	96.97	33	1	0	1	33	818292	818260	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-08	50.7	1.0	CAGAAGCTGACGAAAAGTCAGCTTACGATAATG	818260-818292	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	1.1|214888|33|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	96.97	33	1	0	1	33	1026415	1026383	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-08	50.7	1.0	CAGAAGCTGACGAAAAGTCAGCTTACGATAATG	1026383-1026415	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	1.1|214888|33|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	96.97	33	1	0	1	33	1350400	1350432	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-08	50.7	1.0	CAGAAGCTGACGAAAAGTCAGCTTACGATAATG	1350400-1350432	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	1.1|214888|33|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	96.97	33	1	0	1	33	2452769	2452801	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-08	50.7	1.0	CAGAAGCTGACGAAAAGTCAGCTTACGATAATG	2452769-2452801	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	1.1|214888|33|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.94	33	2	0	1	33	728977	729009	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-07	47.5	1.0	CAGAAGCTGACGAAAAGTCAGCTTACGATAATG	728977-729009	CAGAAGATGACGAAAAGTCAGCTTACAATAATG	2
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	2.2|1244246|26|CP029669|CRT	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	96.15	26	1	0	1	26	1350412	1350387	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-05	39.6	1.0	TCGCCAGCTTCTGTGTTGGGGCCCCG	1350387-1350412	CGGGGCCCCAACACAGAAGCTGACGA	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	2.2|1244246|26|CP029669|CRT	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	92.31	26	2	0	1	26	1809288	1809313	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-04	36.5	1.0	TCGCCAGCTTCTGTGTTGGGGCCCCG	1809288-1809313	TCGTCAGCTTCTTTGTTGGGGCCCCG	2
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	2.4|1244360|26|CP029669|CRT	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	92.31	26	2	0	1	26	1387507	1387532	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-04	36.5	1.0	CCGCCAGCCTCTGTGTTGGGGCCCCG	1387507-1387532	CCGCCTGCTTCTGTGTTGGGGCCCCG	2
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	2.5|1244386|33|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.94	33	2	0	1	33	1306897	1306865	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-07	47.5	1.0	CCAACTTGCACACTATTGTAAGCTGACTTTCCA	1306865-1306897	TGGTAAGTCAGCTTACAATAATGTGCAAGTTGG	2
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	3.1|1307169|34|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	34	0	0	1	34	729022	729055	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	5e-10	55.5	1.0	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	729022-729055	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	3.1|1307169|34|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	34	0	0	1	34	818247	818214	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	5e-10	55.5	1.0	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	818214-818247	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	4.1|1350443|26|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	96.15	26	1	0	1	26	1387532	1387507	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-05	39.6	1.0	CGGGGCCCCAACACAGAAGCTGGCGG	1387507-1387532	CCGCCTGCTTCTGTGTTGGGGCCCCG	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	4.1|1350443|26|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	92.31	26	2	0	1	26	1387476	1387451	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	1e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGCGG	1387451-1387476	CCGCCTGCTTCTATGTTGGGGCCCCG	2
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.1|2287382|17|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	17	0	0	1	17	1355837	1355853	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.030	28.5	1.0	AAGAATTTCGAAAAGAA	1355837-1355853	AAGAATTTCGAAAAGAA	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.1|2287382|17|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	17	0	0	1	17	1355892	1355908	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.030	28.5	1.0	AAGAATTTCGAAAAGAA	1355892-1355908	AAGAATTTCGAAAAGAA	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.1|2287382|17|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	17	0	0	1	17	1932831	1932815	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.030	28.5	1.0	AAGAATTTCGAAAAGAA	1932815-1932831	TTCTTTTCGAAATTCTT	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	16	0	0	1	16	203983	203998	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.089	26.9	1.0	TCAGCTTACAATAATG	203983-203998	TCAGCTTACAATAATG	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	16	0	0	1	16	204041	204056	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.089	26.9	1.0	TCAGCTTACAATAATG	204041-204056	TCAGCTTACAATAATG	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	16	0	0	1	16	728994	729009	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.089	26.9	1.0	TCAGCTTACAATAATG	728994-729009	TCAGCTTACAATAATG	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	16	0	0	1	16	813863	813878	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.089	26.9	1.0	TCAGCTTACAATAATG	813863-813878	TCAGCTTACAATAATG	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	16	0	0	1	16	818275	818260	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.089	26.9	1.0	TCAGCTTACAATAATG	818260-818275	CATTATTGTAAGCTGA	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	16	0	0	1	16	1026398	1026383	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.089	26.9	1.0	TCAGCTTACAATAATG	1026383-1026398	CATTATTGTAAGCTGA	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	16	0	0	1	16	1127010	1127025	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.089	26.9	1.0	TCAGCTTACAATAATG	1127010-1127025	TCAGCTTACAATAATG	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	16	0	0	1	16	1306872	1306887	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.089	26.9	1.0	TCAGCTTACAATAATG	1306872-1306887	TCAGCTTACAATAATG	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	16	0	0	1	16	1809283	1809268	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.089	26.9	1.0	TCAGCTTACAATAATG	1809268-1809283	CATTATTGTAAGCTGA	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	100.00	16	0	0	1	16	2452786	2452801	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.089	26.9	1.0	TCAGCTTACAATAATG	2452786-2452801	TCAGCTTACAATAATG	0
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.75	16	1	0	1	16	371424	371409	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.80	23.8	1.0	TCAGCTTACAATAATG	371409-371424	CATTATTGAAAGCTGA	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.75	16	1	0	1	16	549991	550006	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.80	23.8	1.0	TCAGCTTACAATAATG	549991-550006	TCAGCTTACTATAATG	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.75	16	1	0	1	16	772207	772222	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.80	23.8	1.0	TCAGCTTACAATAATG	772207-772222	TCAGCTTACAACAATG	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.75	16	1	0	1	16	1030366	1030351	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.80	23.8	1.0	TCAGCTTACAATAATG	1030351-1030366	CATTTTTGTAAGCTGA	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	7.2|2287452|16|CP029669|PILER-CR	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.75	16	1	0	1	16	2639084	2639099	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	0.80	23.8	1.0	TCAGCTTACAATAATG	2639084-2639099	TCAGCTTACAACAATG	1
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	8.1|2728291|31|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.55	31	2	0	1	31	728981	729011	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	6e-07	44.4	1.0	AGGTGACGAAAAGTCAGCATACAATAATGTG	728981-729011	AGATGACGAAAAGTCAGCTTACAATAATGTG	2
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	8.1|2728291|31|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.55	31	2	0	1	31	818288	818258	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	6e-07	44.4	1.0	AGGTGACGAAAAGTCAGCATACAATAATGTG	818258-818288	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	8.1|2728291|31|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.55	31	2	0	1	31	1026411	1026381	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	6e-07	44.4	1.0	AGGTGACGAAAAGTCAGCATACAATAATGTG	1026381-1026411	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	8.1|2728291|31|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.55	31	2	0	1	31	1126997	1127027	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	6e-07	44.4	1.0	AGGTGACGAAAAGTCAGCATACAATAATGTG	1126997-1127027	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	8.1|2728291|31|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.55	31	2	0	1	31	1350404	1350434	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	6e-07	44.4	1.0	AGGTGACGAAAAGTCAGCATACAATAATGTG	1350404-1350434	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	8.1|2728291|31|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.55	31	2	0	1	31	1809296	1809266	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	6e-07	44.4	1.0	AGGTGACGAAAAGTCAGCATACAATAATGTG	1809266-1809296	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
CP029669	Staphylococcus aureus strain AR_0223 chromosome, complete genome	8.1|2728291|31|CP029669|CRISPRCasFinder	CP029669.1	Staphylococcus aureus strain AR_0223 chromosome, complete genome	93.55	31	2	0	1	31	2452773	2452803	214865-214943|1244133-1244441|1307145-1307226|1350413-1350498|1526350-1526442|1770601-1770702|2287329-2287502|2728266-2728346|2852114-2852204	6e-07	44.4	1.0	AGGTGACGAAAAGTCAGCATACAATAATGTG	2452773-2452803	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
