The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	323275	343694	4933522	tail,plate	Burkholderia_phage(47.37%)	25	NA	NA
AWO54896.1|323275_324004_-	hypothetical protein	NA	A0A077SLK3	Escherichia_phage	37.3	5.6e-35
AWO54897.1|324200_324491_-	hypothetical protein	NA	NA	NA	NA	NA
AWO54898.1|324739_325195_-	hypothetical protein	NA	NA	NA	NA	NA
AWO54899.1|325191_325797_-	DUF4376 domain-containing protein	NA	NA	NA	NA	NA
AWO54900.1|325801_327547_-|tail	phage tail protein	tail	A0A0M3ULF6	Salmonella_phage	52.2	3.2e-52
AWO54901.1|327549_328182_-|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	6.6e-24
AWO54902.1|328174_329290_-|plate	baseplate protein	plate	Q6QI99	Burkholderia_phage	52.2	1.8e-101
AWO54903.1|329280_329640_-|plate	baseplate protein	plate	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
AWO54904.1|329803_331351_-	hypothetical protein	NA	B9UDL6	Salmonella_phage	29.9	1.9e-48
AWO54905.1|331350_332280_-	glycosyltransferase	NA	S5FKN0	Shigella_phage	83.8	8.8e-150
AWO54906.1|332276_332639_-	GtrA family protein	NA	I1TED9	Salmonella_phage	70.8	1.2e-43
AWO54907.1|332966_333689_-|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	41.0	3.3e-11
AWO54908.1|333698_334742_-	phage protein D	NA	Q6QIA2	Burkholderia_phage	45.1	2.5e-76
AWO54909.1|334729_334939_-	hypothetical protein	NA	A4JWL2	Burkholderia_virus	60.3	9.8e-17
AWO54910.1|335890_338245_-|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.6	9.0e-66
AWO54911.1|338341_338470_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
AWO54912.1|338429_338747_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
AWO54913.1|338798_339323_-|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
AWO54914.1|339322_340750_-|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	70.9	1.1e-194
AWO54915.1|340739_340937_-	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
AWO54916.1|340933_341389_-	hypothetical protein	NA	NA	NA	NA	NA
AWO54917.1|341548_341863_-	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
AWO54918.1|341875_342481_-	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	59.9	2.5e-60
AWO54919.1|342483_342771_-	hypothetical protein	NA	Q6QIC8	Burkholderia_phage	49.1	2.3e-16
AWO54920.1|343346_343694_+	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
>prophage 2
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	1123790	1169034	4933522	terminase,integrase,lysis,coat,tail,portal,protease	Enterobacteria_phage(79.41%)	69	1114560:1114576	1177329:1177345
1114560:1114576	attL	GATATTGAAATTCGCGT	NA	NA	NA	NA
AWO55599.1|1123790_1124843_-	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	58.5	1.7e-112
AWO55600.1|1125125_1126229_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	39.8	6.9e-61
AWO55601.1|1126240_1127491_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.5	1.6e-98
AWO59270.1|1127696_1128365_-|integrase	site-specific integrase	integrase	Q76H30	Enterobacteria_phage	100.0	4.7e-129
AWO55602.1|1128736_1129087_-	DNA-binding protein	NA	Q76H29	Enterobacteria_phage	100.0	3.7e-61
AWO55603.1|1129298_1129583_-	ASCH domain-containing protein	NA	Q76H28	Enterobacteria_phage	100.0	1.4e-50
AWO55604.1|1129575_1129860_-	DUF4752 domain-containing protein	NA	Q76H46	Enterobacteria_phage	100.0	1.6e-49
AWO55605.1|1129859_1130504_-	DUF551 domain-containing protein	NA	Q76H45	Enterobacteria_phage	99.5	1.4e-122
AWO55606.1|1130490_1130724_-	hypothetical protein	NA	NA	NA	NA	NA
AWO55607.1|1130720_1131230_-	hypothetical protein	NA	Q76H44	Enterobacteria_phage	100.0	2.8e-89
AWO55608.1|1131226_1131397_-	DUF2737 domain-containing protein	NA	Q76H43	Enterobacteria_phage	100.0	1.6e-25
AWO55609.1|1131407_1131701_-	DUF2856 domain-containing protein	NA	Q76H42	Enterobacteria_phage	100.0	1.4e-48
AWO55610.1|1131747_1132032_-	sigma-70 family RNA polymerase sigma factor	NA	Q76H41	Enterobacteria_phage	100.0	1.4e-45
AWO55611.1|1132031_1132739_-	recombinase	NA	Q76H40	Enterobacteria_phage	100.0	3.1e-139
AWO55612.1|1132868_1133057_-	protein kil	NA	I6S647	Salmonella_phage	100.0	3.7e-31
AWO55613.1|1133037_1133196_-|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	Q76H38	Enterobacteria_phage	100.0	2.4e-23
AWO55614.1|1133280_1133595_-	superinfection exclusion protein	NA	Q76H37	Enterobacteria_phage	100.0	1.5e-56
AWO55615.1|1133870_1134158_-	hypothetical protein	NA	Q76H36	Enterobacteria_phage	100.0	2.7e-49
AWO55616.1|1134191_1134836_-	pentapeptide repeat-containing protein	NA	Q76H35	Enterobacteria_phage	100.0	6.5e-51
AWO55617.1|1134919_1135114_-	restriction endonuclease	NA	Q76H34	Enterobacteria_phage	100.0	1.9e-30
AWO55618.1|1135327_1135915_+	superinfection exclusion protein B	NA	Q76H59	Enterobacteria_phage	100.0	1.4e-100
AWO55619.1|1135927_1136230_-	regulator	NA	Q76H58	Enterobacteria_phage	100.0	9.7e-50
AWO55620.1|1136593_1136797_+	hypothetical protein	NA	A0A2H5BFH9	Salmonella_phage	100.0	2.0e-27
AWO55621.1|1136835_1137915_-	hypothetical protein	NA	A0A192Y6S0	Salmonella_phage	100.0	1.5e-193
AWO55622.1|1138079_1138769_-	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	100.0	1.3e-126
AWO55623.1|1138879_1139095_+	transcriptional regulator	NA	Q76H55	Enterobacteria_phage	100.0	1.3e-32
AWO55624.1|1139205_1139487_+	hypothetical protein	NA	Q76H54	Enterobacteria_phage	100.0	4.3e-44
AWO55625.1|1139669_1140491_+	replication of DNA	NA	Q76H52	Enterobacteria_phage	100.0	5.2e-154
AWO55626.1|1140487_1141864_+	replicative DNA helicase	NA	Q76H51	Enterobacteria_phage	100.0	1.9e-254
AWO55627.1|1141860_1142130_+	hypothetical protein	NA	Q76H50	Enterobacteria_phage	100.0	4.9e-45
AWO55628.1|1142185_1142641_+	recombination protein NinB	NA	Q76H49	Enterobacteria_phage	100.0	4.7e-80
AWO55629.1|1142637_1142811_+	protein ninD	NA	Q76H74	Enterobacteria_phage	100.0	2.3e-32
AWO55630.1|1142777_1142954_+	NinE family protein	NA	Q76H73	Enterobacteria_phage	100.0	1.0e-27
AWO55631.1|1142956_1143298_+	DUF2591 domain-containing protein	NA	Q76H72	Enterobacteria_phage	100.0	2.1e-64
AWO55632.1|1143290_1143467_+	protein ninF	NA	Q76H71	Enterobacteria_phage	100.0	6.7e-27
AWO55633.1|1143459_1144071_+	recombination protein NinG	NA	Q76H70	Enterobacteria_phage	100.0	7.9e-99
AWO55634.1|1144067_1144292_+	protein ninY	NA	Q76H69	Enterobacteria_phage	100.0	6.3e-38
AWO55635.1|1144288_1144492_+	protein ninH	NA	I6RSQ6	Salmonella_phage	100.0	7.2e-33
AWO55636.1|1144472_1144652_+	hypothetical protein	NA	Q76H67	Enterobacteria_phage	100.0	1.9e-24
AWO55637.1|1144648_1145422_+	antitermination protein	NA	Q76H66	Enterobacteria_phage	100.0	8.1e-133
AWO55638.1|1145534_1145768_+	hypothetical protein	NA	M1E3N9	Enterobacteria_phage	87.0	1.1e-21
AWO55639.1|1145852_1146056_+	hypothetical protein	NA	I6R0S9	Salmonella_phage	100.0	1.1e-33
AWO59271.1|1146033_1146531_+	lysozyme	NA	B8K1G9	Salmonella_phage	100.0	4.5e-92
AWO55640.1|1146527_1146995_+|lysis	lysis protein	lysis	Q76H63	Enterobacteria_phage	100.0	1.7e-77
AWO55641.1|1147029_1147254_+	hypothetical protein	NA	A0A1V0E5I0	Salmonella_phage	88.7	3.6e-25
AWO55642.1|1147207_1147738_+	KilA-N domain-containing protein	NA	Q76H61	Enterobacteria_phage	100.0	1.3e-94
AWO55643.1|1147960_1148203_+	DUF2560 domain-containing protein	NA	Q76H60	Enterobacteria_phage	100.0	1.7e-33
AWO55644.1|1148206_1148596_+	hypothetical protein	NA	Q76H27	Enterobacteria_phage	100.0	3.9e-75
AWO55645.1|1148595_1149000_+	Decoration protein	NA	Q76H26	Enterobacteria_phage	100.0	1.1e-67
AWO55646.1|1149003_1149492_+	DNA-packaging protein	NA	Q76H25	Enterobacteria_phage	100.0	1.0e-88
AWO55647.1|1149469_1150969_+|terminase	terminase	terminase	Q76H24	Enterobacteria_phage	100.0	2.8e-307
AWO55648.1|1150968_1153146_+|portal	portal protein	portal	Q76H23	Enterobacteria_phage	100.0	0.0e+00
AWO55649.1|1153159_1154071_+	scaffolding protein	NA	Q76H22	Enterobacteria_phage	100.0	1.5e-162
AWO55650.1|1154070_1155363_+|coat	coat protein	coat	Q76H21	Enterobacteria_phage	100.0	1.1e-243
AWO55651.1|1155403_1155964_+	hypothetical protein	NA	C6ZR11	Salmonella_phage	100.0	9.8e-104
AWO55652.1|1155947_1156448_+	hypothetical protein	NA	Q76H19	Enterobacteria_phage	100.0	4.2e-90
AWO55653.1|1156407_1157826_+	hypothetical protein	NA	Q76H18	Enterobacteria_phage	100.0	6.4e-277
AWO55654.1|1157829_1158531_+|tail	phage tail protein	tail	Q76H17	Enterobacteria_phage	100.0	1.7e-76
AWO55655.1|1158530_1158986_+	DUF2824 domain-containing protein	NA	Q76H16	Enterobacteria_phage	100.0	1.8e-87
AWO55656.1|1158988_1159678_+	DNA transfer protein	NA	A0A2H5BFK5	Salmonella_phage	100.0	2.9e-118
AWO55657.1|1159688_1161125_+	DNA transfer protein	NA	Q76H14	Enterobacteria_phage	100.0	7.7e-246
AWO55658.1|1161124_1163101_+	DNA transfer protein	NA	Q76H13	Enterobacteria_phage	100.0	0.0e+00
AWO59272.1|1163239_1163533_+	hypothetical protein	NA	Q76H12	Enterobacteria_phage	100.0	3.2e-50
AWO55659.1|1163553_1163802_-	Arc family DNA-binding protein	NA	Q76H48	Enterobacteria_phage	100.0	1.8e-38
AWO55660.1|1163937_1165941_+	endorhamnosidase	NA	Q76H47	Enterobacteria_phage	100.0	0.0e+00
AWO55661.1|1165999_1167457_-	hypothetical protein	NA	A8CG94	Salmonella_phage	100.0	1.3e-240
AWO55662.1|1167446_1168379_-	glycosyltransferase	NA	A8CG95	Salmonella_phage	100.0	5.5e-176
AWO55663.1|1168375_1168738_-	GtrA family protein	NA	A0A192Y6N5	Salmonella_phage	100.0	5.0e-61
AWO55664.1|1168854_1169034_+	hypothetical protein	NA	M1E3P7	Enterobacteria_phage	92.3	4.3e-13
1177329:1177345	attR	GATATTGAAATTCGCGT	NA	NA	NA	NA
>prophage 3
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	1761676	1770408	4933522	protease,transposase	Dickeya_phage(14.29%)	9	NA	NA
AWO56205.1|1761676_1762795_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
AWO56206.1|1762791_1764738_+	macrolide ABC transporter permease/ATP-binding protein MacB	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
AWO56207.1|1764718_1764913_+	hypothetical protein	NA	NA	NA	NA	NA
AWO56208.1|1764867_1765089_-	cold shock domain protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
AWO56209.1|1765412_1765733_+|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
AWO56210.1|1765763_1768040_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
AWO56211.1|1768092_1768275_+	hypothetical protein	NA	NA	NA	NA	NA
AWO56212.1|1768231_1768690_+|transposase	IS200/IS605 family transposase IS200F	transposase	A0A1S5RHE3	Helicobacter_phage	33.9	5.1e-10
AWO56213.1|1769152_1770408_-|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	33.9	5.4e-17
>prophage 4
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	1807125	1919280	4933522	terminase,lysis,tRNA,holin,tail,portal,protease	Salmonella_phage(41.38%)	113	NA	NA
AWO56239.1|1807125_1807887_+|protease	metalloprotease	protease	NA	NA	NA	NA
AWO56240.1|1808059_1808743_+	cytidylate kinase	NA	NA	NA	NA	NA
AWO56241.1|1808856_1810530_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
AWO56242.1|1810685_1810970_+	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	40.2	4.1e-10
AWO56243.1|1811199_1813464_+	ComEC family protein	NA	Q332C0	Clostridium_botulinum_C_phage	22.5	8.8e-10
AWO56244.1|1813500_1815249_+	lipid A export ATP-binding/permease MsbA	NA	W8CYL7	Bacillus_phage	30.5	3.2e-60
AWO56245.1|1815245_1816223_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AWO56246.1|1816266_1817499_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AWO56247.1|1817550_1817733_+	hypothetical protein	NA	NA	NA	NA	NA
AWO56248.1|1817729_1818476_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AWO56249.1|1818686_1819580_+	hypothetical protein	NA	NA	NA	NA	NA
AWO56250.1|1819559_1820336_-	envelope biogenesis factor ElyC	NA	NA	NA	NA	NA
AWO56251.1|1820471_1821275_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
AWO56252.1|1821267_1822590_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
AWO56253.1|1822570_1823275_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
AWO56254.1|1823274_1827741_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
AWO56255.1|1828085_1829927_+	L,D-transpeptidase	NA	NA	NA	NA	NA
AWO56256.1|1830186_1830735_+	DUF882 domain-containing protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	1.2e-05
AWO56257.1|1830762_1831410_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AWO56258.1|1831471_1832662_-	aspartate aminotransferase	NA	NA	NA	NA	NA
AWO56259.1|1832846_1833938_-	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	51.7	2.2e-99
AWO56260.1|1834544_1835945_-|tRNA	asparagine--tRNA ligase	tRNA	A0A167RLM0	Powai_lake_megavirus	35.1	4.5e-81
AWO56261.1|1836145_1836607_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AWO56262.1|1836603_1836837_-	hypothetical protein	NA	NA	NA	NA	NA
AWO56263.1|1836923_1838138_+	PLP-dependent lyase/thiolase	NA	NA	NA	NA	NA
AWO56264.1|1839895_1841098_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
AWO56265.1|1841292_1842585_-	DUF3596 domain-containing protein	NA	S4TSP2	Salmonella_phage	99.8	1.0e-252
AWO56266.1|1842629_1842878_-	excisionase	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
AWO56267.1|1842918_1843158_-	DUF4060 domain-containing protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
AWO56268.1|1843200_1844358_-	enterohemolysin	NA	S4TTE8	Salmonella_phage	100.0	1.6e-217
AWO56269.1|1844320_1847206_-	exodeoxyribonuclease	NA	H6WRX1	Salmonella_phage	97.3	0.0e+00
AWO56270.1|1847332_1847632_-	DNA breaking-rejoining protein	NA	S4TSN6	Salmonella_phage	84.5	8.1e-49
AWO56271.1|1847653_1847812_-	hypothetical protein	NA	H6WRX3	Salmonella_phage	98.1	1.2e-22
AWO56272.1|1847804_1848065_-	hypothetical protein	NA	NA	NA	NA	NA
AWO56273.1|1848114_1848525_-	helix-turn-helix domain-containing protein	NA	A0A1B5FPF4	Escherichia_phage	42.4	8.1e-07
AWO56274.1|1848644_1848884_+	helix-turn-helix domain-containing protein	NA	H6WRX5	Salmonella_phage	47.2	8.3e-12
AWO56275.1|1848849_1849224_+	hypothetical protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
AWO56276.1|1849308_1850292_+	hypothetical protein	NA	H6WRX7	Salmonella_phage	100.0	1.9e-163
AWO56277.1|1850294_1851044_+	DNA replication protein DnaC	NA	S4TNF5	Salmonella_phage	99.6	3.6e-138
AWO56278.1|1851054_1851402_+	DUF977 domain-containing protein	NA	H6WRX9	Salmonella_phage	89.6	5.4e-52
AWO56279.1|1851398_1851710_+	ead/Ea22-like family protein	NA	A0A220NQV2	Salmonella_phage	97.2	7.2e-32
AWO56280.1|1851787_1852078_+	hypothetical protein	NA	NA	NA	NA	NA
AWO56281.1|1852369_1852603_+	DinI family protein	NA	H6WRY5	Salmonella_phage	98.7	2.1e-36
AWO56282.1|1852714_1852936_+	hypothetical protein	NA	NA	NA	NA	NA
AWO56283.1|1853620_1853827_+	hypothetical protein	NA	S4TNP0	Salmonella_phage	100.0	3.5e-35
AWO56284.1|1853829_1854441_+	protein NinG	NA	A0A0M4RU10	Salmonella_phage	91.6	6.9e-79
AWO56285.1|1854437_1854584_+	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	97.9	4.3e-19
AWO56286.1|1854573_1855371_+	antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.2	5.2e-151
AWO56287.1|1855437_1855755_+	hypothetical protein	NA	NA	NA	NA	NA
AWO56288.1|1855928_1856054_+	hypothetical protein	NA	NA	NA	NA	NA
AWO56289.1|1856189_1856639_-	hypothetical protein	NA	NA	NA	NA	NA
AWO56290.1|1856999_1857686_-|protease	type III secretion system effector protease GtgA	protease	Q9MBM0	Phage_Gifsy-2	100.0	2.1e-132
AWO59303.1|1857961_1858291_+|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
AWO56291.1|1858274_1858727_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	2.3e-79
AWO59304.1|1858744_1859224_+|lysis	lysis protein	lysis	Q56118	Enterobacteria_phage	77.0	1.4e-55
AWO56292.1|1859431_1859965_+	DUF1441 domain-containing protein	NA	A0A291AWV8	Escherichia_phage	48.1	1.0e-33
AWO56293.1|1859921_1862060_+|terminase	phage terminase large subunit family protein	terminase	A5LH27	Enterobacteria_phage	72.6	3.4e-290
AWO56294.1|1862056_1862263_+	primosomal replication protein PriB/PriC domain protein	NA	A0A1W6JT66	Pseudomonas_phage	53.3	2.9e-05
AWO59305.1|1862289_1863807_+|portal	phage portal protein	portal	A0A291AWU2	Escherichia_phage	65.1	1.5e-175
AWO59306.1|1863730_1865812_+	peptidase S14	NA	A0A291AWT6	Escherichia_phage	69.5	4.8e-265
AWO56295.1|1865902_1866226_+	DUF2190 domain-containing protein	NA	K7PLV6	Enterobacteria_phage	61.3	7.7e-29
AWO56296.1|1866218_1866518_+	ATP-binding protein	NA	K7PH43	Enterobacteria_phage	45.1	4.5e-15
AWO56297.1|1866498_1867065_+|tail	phage tail protein	tail	Q9G063	Phage_Gifsy-2	97.8	9.5e-14
AWO56298.1|1867061_1867463_+|tail	phage tail protein	tail	K7PHM6	Enterobacterial_phage	60.9	1.5e-42
AWO56299.1|1867474_1868224_+|tail	phage tail protein	tail	A0A291AWU6	Escherichia_phage	68.6	3.7e-90
AWO56300.1|1868269_1868668_+|tail	phage minor tail protein G	tail	K7PLV8	Enterobacteria_phage	56.8	8.6e-30
AWO56301.1|1868664_1868994_+|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	50.9	5.0e-23
AWO59307.1|1869073_1872061_+|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	62.1	8.2e-266
AWO56302.1|1872057_1872390_+|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	61.5	3.3e-35
AWO56303.1|1872488_1872986_+	Ail/OmpX	NA	A0A1B0VBR9	Salmonella_phage	36.6	1.4e-16
AWO56304.1|1873102_1873636_-	superoxide dismutase [Cu-Zn] SodC1	NA	Q9MC02	Salmonella_phage	54.0	1.8e-46
AWO56305.1|1873725_1874421_+|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	66.2	6.5e-89
AWO56306.1|1875065_1875770_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	62.6	9.2e-67
AWO56307.1|1877687_1879193_+	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	63.9	6.9e-120
AWO56308.1|1879231_1879474_+	hypothetical protein	NA	NA	NA	NA	NA
AWO56309.1|1879527_1881966_+|tail	phage tail protein	tail	A0A0K2FIZ6	Escherichia_phage	63.6	1.7e-91
AWO56310.1|1881965_1882547_+|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	88.5	3.3e-94
AWO56311.1|1883022_1883991_+	SPI-2 type III secretion system effector SseI	NA	Q9MBL9	Phage_Gifsy-2	99.7	7.9e-194
AWO56312.1|1884638_1885265_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	63.2	1.4e-66
AWO56313.1|1885333_1885633_-	hypothetical protein	NA	NA	NA	NA	NA
AWO56314.1|1885617_1886304_-	virulence protein	NA	NA	NA	NA	NA
AWO56315.1|1886574_1886766_-	DNA-damage-inducible protein I	NA	S4TNM0	Salmonella_phage	95.2	6.2e-26
AWO56316.1|1887192_1889805_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.6	6.3e-20
AWO56317.1|1890012_1891023_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AWO56318.1|1891188_1891731_+	cell division protein ZapC	NA	NA	NA	NA	NA
AWO56319.1|1891727_1892837_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AWO56320.1|1892935_1895044_+	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA	NA
AWO56321.1|1895056_1896964_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
AWO56322.1|1896978_1898232_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
AWO56323.1|1898236_1899877_+	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
AWO56324.1|1899873_1900437_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
AWO56325.1|1900692_1900860_+	ribosome modulation factor	NA	NA	NA	NA	NA
AWO56326.1|1900959_1901478_-	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA	NA
AWO56327.1|1901546_1903307_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
AWO56328.1|1903492_1903945_+	macrodomain Ter protein	NA	NA	NA	NA	NA
AWO56329.1|1904016_1905069_-	outer membrane protein A	NA	NA	NA	NA	NA
AWO56330.1|1905425_1905935_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
AWO56331.1|1906151_1906757_+	DNA transformation protein	NA	NA	NA	NA	NA
AWO56332.1|1906743_1908897_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
AWO56333.1|1908915_1909362_-	YccF domain-containing protein	NA	NA	NA	NA	NA
AWO56334.1|1909485_1911540_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	8.5e-20
AWO56335.1|1911575_1912034_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AWO56336.1|1912128_1912791_-	DUF2057 domain-containing protein	NA	NA	NA	NA	NA
AWO56337.1|1912961_1913378_+	CoA-binding protein	NA	NA	NA	NA	NA
AWO56338.1|1913422_1913740_-	heat-shock protein HspQ	NA	NA	NA	NA	NA
AWO56339.1|1913797_1915009_-	ribosomal RNA large subunit methyltransferase I	NA	NA	NA	NA	NA
AWO56340.1|1915223_1915772_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
AWO56341.1|1915797_1916577_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AWO56342.1|1916625_1916907_+	acylphosphatase	NA	NA	NA	NA	NA
AWO56343.1|1916903_1917233_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
AWO56344.1|1917319_1917979_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	51.9	2.3e-43
AWO56345.1|1918044_1918254_+	hypothetical protein	NA	NA	NA	NA	NA
AWO56346.1|1918599_1919280_-|protease	type III secretion system effector protease PipA	protease	Q9MBM0	Phage_Gifsy-2	70.6	8.3e-81
>prophage 5
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	2660677	2710838	4933522	protease,integrase,tail,tRNA	Moraxella_phage(14.29%)	59	2701254:2701276	2710969:2710991
AWO57081.1|2660677_2661373_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
AWO57082.1|2661430_2663341_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	32.7	4.5e-92
AWO57083.1|2663471_2663816_+	RidA family protein	NA	NA	NA	NA	NA
AWO57084.1|2663821_2664001_-	YoaH family protein	NA	NA	NA	NA	NA
AWO57085.1|2664081_2665446_+	aminodeoxychorismate synthase component I	NA	A0A0B5J984	Pandoravirus	35.0	1.9e-44
AWO57086.1|2665449_2666028_+	coenzyme A pyrophosphatase	NA	NA	NA	NA	NA
AWO57087.1|2666291_2667656_+	L-serine ammonia-lyase	NA	NA	NA	NA	NA
AWO57088.1|2667793_2669395_+	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AWO57089.1|2669416_2670976_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	44.4	9.5e-40
AWO57090.1|2670963_2671299_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57091.1|2671448_2672417_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA	NA
AWO57092.1|2672469_2673270_+	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA	NA
AWO57093.1|2673282_2674134_+	PTS mannose transporter subunit IID	NA	NA	NA	NA	NA
AWO57094.1|2674191_2674650_+	DUF986 domain-containing protein	NA	NA	NA	NA	NA
AWO59338.1|2675005_2675626_+	manganese efflux pump MntP	NA	NA	NA	NA	NA
AWO57095.1|2675622_2676432_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA	NA
AWO57096.1|2676497_2678243_-	peptidoglycan glycosyltransferase FtsI	NA	NA	NA	NA	NA
AWO57097.1|2678462_2678672_-	cold-shock protein CspC	NA	A0A1W6JNX5	Morganella_phage	78.1	1.6e-22
AWO57098.1|2678684_2678828_-	DUF2627 domain-containing protein	NA	NA	NA	NA	NA
AWO57099.1|2679476_2679764_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57100.1|2679834_2679978_-	PhoP/PhoQ regulator MgrB	NA	NA	NA	NA	NA
AWO57101.1|2680135_2680375_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57102.1|2680586_2681378_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA	NA
AWO57103.1|2681553_2682927_+	MFS transporter	NA	NA	NA	NA	NA
AWO57104.1|2682974_2683856_-|protease	protease HtpX	protease	NA	NA	NA	NA
AWO57105.1|2684049_2686098_-|tail,protease	tail-specific protease	tail,protease	A0A0R6PIZ1	Moraxella_phage	33.5	8.0e-87
AWO57106.1|2686117_2686804_-	RNA chaperone ProQ	NA	NA	NA	NA	NA
AWO57107.1|2686901_2687486_-	GAF domain-containing protein	NA	NA	NA	NA	NA
AWO57108.1|2687527_2688811_+	paraquat-inducible protein A	NA	NA	NA	NA	NA
AWO57109.1|2688773_2691413_+	MCE family protein	NA	NA	NA	NA	NA
AWO59339.1|2691490_2692930_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA	NA
AWO57110.1|2693044_2693284_+	DUF1480 domain-containing protein	NA	NA	NA	NA	NA
AWO57111.1|2693394_2693586_+	DUF1482 domain-containing protein	NA	NA	NA	NA	NA
AWO57112.1|2693604_2694255_-	serine/threonine-protein phosphatase 1	NA	A0A222YWF0	Escherichia_phage	51.4	1.1e-58
AWO57113.1|2694478_2694643_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57114.1|2694927_2695650_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA	NA
AWO57115.1|2696333_2696729_+	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	32.0	6.0e-15
AWO57116.1|2697058_2697535_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57117.1|2697922_2698342_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AWO57118.1|2698470_2698665_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57119.1|2698711_2698981_+	hypothetical protein	NA	Q6UAV5	Klebsiella_phage	39.0	1.5e-06
AWO57120.1|2699146_2699287_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57121.1|2700750_2701119_+|integrase	integrase	integrase	K7PHK0	Enterobacteria_phage	39.8	5.4e-18
AWO57122.1|2701056_2701314_-	hypothetical protein	NA	NA	NA	NA	NA
2701254:2701276	attL	AAAAAGAGACCGAATACGATTCC	NA	NA	NA	NA
AWO59340.1|2701604_2701805_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57123.1|2702422_2703337_+	protein PagO	NA	NA	NA	NA	NA
AWO57124.1|2703469_2703628_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57125.1|2703637_2704252_+	disulfide bond formation protein B	NA	NA	NA	NA	NA
AWO57126.1|2705004_2705271_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57127.1|2705399_2705525_-	arsenic transporter	NA	NA	NA	NA	NA
AWO57128.1|2705787_2705904_+|tail	phage tail protein	tail	NA	NA	NA	NA
AWO57129.1|2706094_2706295_+	phage virulence factor	NA	NA	NA	NA	NA
AWO57130.1|2706391_2707273_-|tail	phage tail protein	tail	A0A0M4RTP2	Salmonella_phage	76.0	2.2e-65
AWO57131.1|2707745_2707934_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57132.1|2707998_2708166_+	lytic enzyme	NA	NA	NA	NA	NA
AWO57133.1|2708422_2708956_-	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	48.3	1.4e-11
AWO57134.1|2709009_2709240_-	lytic enzyme	NA	Q8HA86	Salmonella_phage	93.7	6.1e-28
AWO59342.1|2709429_2709924_+	RecE	NA	A0A0U2I1R6	Escherichia_phage	68.9	8.2e-22
AWO59341.1|2709983_2710838_+|integrase	integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	50.9	3.6e-73
2710969:2710991	attR	AAAAAGAGACCGAATACGATTCC	NA	NA	NA	NA
>prophage 6
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	2716196	2759785	4933522	terminase,integrase,head,lysis,transposase,tail	Edwardsiella_phage(20.0%)	67	2715687:2715701	2757625:2757639
2715687:2715701	attL	GCATTAATGCCAACT	NA	NA	NA	NA
AWO57139.1|2716196_2716772_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	89.5	2.9e-95
AWO57140.1|2716771_2718223_-|tail	tail fiber protein	tail	E5G6P0	Salmonella_phage	71.2	2.9e-43
AWO57141.1|2718212_2718815_-	DUF2612 domain-containing protein	NA	H9C0Y0	Aeromonas_phage	43.2	5.9e-30
AWO57142.1|2718816_2720058_-	hypothetical protein	NA	A0A077KGW9	Edwardsiella_phage	49.6	4.5e-101
AWO57143.1|2720054_2720411_-	hypothetical protein	NA	A0A077KCA1	Edwardsiella_phage	49.1	1.6e-19
AWO57144.1|2720423_2721101_-	oxidoreductase	NA	A0A077KAY0	Edwardsiella_phage	35.5	4.6e-31
AWO57145.1|2721081_2721951_-	hypothetical protein	NA	A0A077KC17	Edwardsiella_phage	32.7	9.1e-32
AWO57146.1|2721947_2722250_-	hypothetical protein	NA	A0A077K9U4	Edwardsiella_phage	49.5	7.0e-24
AWO57147.1|2722249_2722960_-	hypothetical protein	NA	A0A077KGW3	Edwardsiella_phage	34.6	6.5e-28
AWO57148.1|2722956_2725128_-	transglycosylase	NA	A0A0M4REK7	Salmonella_phage	67.1	1.4e-49
AWO57149.1|2725111_2725294_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
AWO57150.1|2725335_2725740_-	hypothetical protein	NA	H9C0W7	Aeromonas_phage	44.8	1.8e-19
AWO57151.1|2725739_2726186_-	hypothetical protein	NA	Q2NPD1	Xanthomonas_phage	40.4	4.8e-21
AWO57152.1|2726186_2727671_-	DUF3383 domain-containing protein	NA	A0A077KGV4	Edwardsiella_phage	41.0	4.0e-96
AWO57153.1|2727651_2728197_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57154.1|2728181_2728547_-	hypothetical protein	NA	A0A077KAW7	Edwardsiella_phage	39.7	8.8e-21
AWO57155.1|2728543_2729128_-	hypothetical protein	NA	H9C0W2	Aeromonas_phage	30.6	3.2e-17
AWO57156.1|2729121_2729577_-	DUF4054 domain-containing protein	NA	Q2NPC6	Xanthomonas_phage	46.0	1.2e-19
AWO57157.1|2729583_2729931_-	hypothetical protein	NA	H9C0V9	Aeromonas_phage	40.2	3.0e-10
AWO57158.1|2729934_2730963_-	DUF2184 domain-containing protein	NA	A0A219YBB0	Aeromonas_phage	48.7	2.3e-82
AWO57159.1|2730962_2731445_-	hypothetical protein	NA	A0A1X9SFC3	Acinetobacter_phage	48.8	1.1e-26
AWO57160.1|2731446_2732793_-	DUF2213 domain-containing protein	NA	A0A219YCD3	Aeromonas_phage	37.4	3.2e-68
AWO57161.1|2732789_2733479_-|head	phage head morphogenesis protein	head	H9C0V1	Aeromonas_phage	49.6	4.5e-58
AWO57162.1|2733519_2735040_-	DUF1073 domain-containing protein	NA	A0A2R3UAL5	Myoviridae_environmental_samples	44.4	7.5e-106
AWO57163.1|2735039_2736461_-|terminase	PBSX family phage terminase large subunit	terminase	A0A077KAW0	Edwardsiella_phage	68.0	1.8e-186
AWO57164.1|2736426_2737179_-	hypothetical protein	NA	G8C7P2	Escherichia_phage	75.6	5.3e-12
AWO57165.1|2737249_2737432_-	DUF826 domain-containing protein	NA	NA	NA	NA	NA
AWO59343.1|2737657_2738098_-|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	84.3	3.5e-56
AWO57166.1|2738118_2738607_-	lysozyme	NA	M9P0E5	Enterobacteria_phage	68.1	2.1e-57
AWO59344.1|2738584_2738887_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AWO57167.1|2739053_2739512_-|transposase	IS200/IS605 family transposase IS200F	transposase	A0A1S5RHE3	Helicobacter_phage	33.9	5.1e-10
AWO57168.1|2739468_2739651_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57169.1|2740325_2740532_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57170.1|2740648_2740876_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57171.1|2741009_2741939_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57172.1|2741925_2742456_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57173.1|2742487_2742829_-	antitermination protein	NA	A0A0P0ZCW0	Stx2-converting_phage	84.1	1.1e-54
AWO57174.1|2743168_2743480_-	DUF1364 domain-containing protein	NA	K7P7Q1	Enterobacteria_phage	84.8	6.1e-39
AWO57175.1|2743476_2743671_-	hypothetical protein	NA	S4TNP0	Salmonella_phage	61.5	6.1e-13
AWO57176.1|2743667_2744267_-	DUF1367 domain-containing protein	NA	A0A0U2RT94	Escherichia_phage	83.9	5.0e-98
AWO57177.1|2744330_2744579_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57178.1|2744828_2744981_-	Hok/Gef family protein	NA	NA	NA	NA	NA
AWO57179.1|2745187_2745460_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57180.1|2745456_2745852_-	DUF977 domain-containing protein	NA	A0A088CBK9	Shigella_phage	37.0	6.4e-17
AWO57181.1|2745864_2746326_-	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	74.8	7.8e-67
AWO57182.1|2746318_2747326_-	DUF1376 domain-containing protein	NA	A0A0U2RT81	Escherichia_phage	67.5	1.8e-124
AWO57183.1|2747369_2747864_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57184.1|2747850_2748105_-	XRE family transcriptional regulator	NA	K7PKH4	Enterobacteria_phage	60.9	5.3e-17
AWO57185.1|2748203_2748602_+	helix-turn-helix domain-containing protein	NA	K7PH19	Enterobacteria_phage	56.0	1.2e-18
AWO57186.1|2748899_2749088_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57187.1|2749032_2749212_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57188.1|2749472_2749748_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57189.1|2749751_2749958_+	cell division inhibitor protein	NA	I6PBM9	Cronobacter_phage	45.6	3.0e-10
AWO57190.1|2750033_2750369_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57191.1|2750509_2753200_+	exodeoxyribonuclease VIII	NA	Q9QF34	Lambdoid_phage	75.6	2.2e-116
AWO57192.1|2753192_2754023_+	recombination protein RecT	NA	A0A1P8DTF2	Proteus_phage	72.0	1.0e-104
AWO57193.1|2754058_2754379_+	hypothetical protein	NA	A0A222YY67	Escherichia_phage	60.2	3.6e-34
AWO57194.1|2754371_2754704_+	hypothetical protein	NA	S4TNP2	Salmonella_phage	72.7	8.5e-15
AWO57195.1|2755314_2755494_+	DUF1187 domain-containing protein	NA	A0A0U2QL97	Escherichia_phage	60.3	7.3e-13
AWO59345.1|2755784_2756021_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57196.1|2756081_2756360_+	excisionase	NA	A0A2H4J5E1	uncultured_Caudovirales_phage	37.5	1.4e-10
AWO57197.1|2756334_2757414_+|integrase	integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	52.8	1.3e-101
AWO59346.1|2757619_2757739_-	hypothetical protein	NA	NA	NA	NA	NA
2757625:2757639	attR	AGTTGGCATTAATGC	NA	NA	NA	NA
AWO57198.1|2757796_2758150_-	DUF2511 domain-containing protein	NA	NA	NA	NA	NA
AWO57199.1|2758166_2759042_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57200.1|2759042_2759417_-	CopC domain-containing protein YobA	NA	NA	NA	NA	NA
AWO57201.1|2759554_2759785_+	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	60.3	2.9e-14
>prophage 7
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	2835235	2913895	4933522	terminase,integrase,plate,head,holin,transposase,tail,portal,capsid,protease	Salmonella_phage(80.88%)	106	2841773:2841788	2915518:2915533
AWO57278.1|2835235_2835694_-|transposase	IS200/IS605 family transposase IS200F	transposase	A0A1S5RHE3	Helicobacter_phage	33.9	5.1e-10
AWO57279.1|2835874_2837080_-	lysine-N-methylase	NA	NA	NA	NA	NA
AWO57280.1|2837158_2838646_-	flagellin FliC	NA	NA	NA	NA	NA
AWO57281.1|2838902_2840306_+	flagellar hook-associated protein 2	NA	NA	NA	NA	NA
AWO57282.1|2840320_2840728_+	flagellar protein FliS	NA	NA	NA	NA	NA
AWO57283.1|2840727_2841096_+	flagellar protein FliT	NA	NA	NA	NA	NA
AWO57284.1|2841167_2842652_+	alpha-amylase	NA	NA	NA	NA	NA
2841773:2841788	attL	TGAAAATATCGATTTT	NA	NA	NA	NA
AWO57285.1|2842691_2843117_-	lipoprotein	NA	NA	NA	NA	NA
AWO57286.1|2843242_2844508_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
AWO57287.1|2844504_2844738_+	SirA-like protein	NA	NA	NA	NA	NA
AWO57288.1|2845002_2845389_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57289.1|2845508_2845823_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
AWO57290.1|2846039_2847722_+	flagellar M-ring protein	NA	NA	NA	NA	NA
AWO57291.1|2847714_2848710_+	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
AWO57292.1|2848702_2849410_+	flagellar assembly protein FliH	NA	NA	NA	NA	NA
AWO57293.1|2849409_2850780_+	flagellum-specific ATP synthase	NA	NA	NA	NA	NA
AWO57294.1|2850801_2851245_+	flagellar protein FliJ	NA	NA	NA	NA	NA
AWO57295.1|2851241_2852459_+	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
AWO57296.1|2852563_2853031_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
AWO57297.1|2853035_2854040_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
AWO57298.1|2854036_2854450_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
AWO57299.1|2854449_2854827_+	flagellar protein FliO	NA	NA	NA	NA	NA
AWO57300.1|2854826_2855564_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA	NA
AWO57301.1|2855573_2855843_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA	NA
AWO57302.1|2855851_2856646_+	flagellar biosynthesis protein FliR	NA	NA	NA	NA	NA
AWO57303.1|2856927_2857551_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AWO57304.1|2857589_2857838_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57305.1|2857912_2858140_+	DUF2525 domain-containing protein	NA	NA	NA	NA	NA
AWO57306.1|2858449_2859265_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA	NA
AWO57307.1|2859243_2860956_-	cellulose synthesis regulatory protein	NA	A0A127AWB9	Bacillus_phage	37.4	1.2e-19
AWO57308.1|2861120_2861366_-	DUF2158 domain-containing protein	NA	NA	NA	NA	NA
AWO57309.1|2861382_2862300_-	DUF808 domain-containing protein	NA	NA	NA	NA	NA
AWO57310.1|2862469_2863390_+	drug/metabolite exporter YedA	NA	NA	NA	NA	NA
AWO57311.1|2863378_2863849_-	very short patch repair endonuclease	NA	E5E3X5	Burkholderia_phage	46.9	1.2e-30
AWO57312.1|2863829_2865260_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	1.0e-104
AWO57313.1|2865333_2866029_-	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	27.1	2.8e-07
AWO57314.1|2866120_2866420_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57315.1|2867069_2868266_+	porin OmpS1	NA	Q1MVN1	Enterobacteria_phage	56.1	1.8e-110
AWO59349.1|2868526_2868715_-	cold-shock protein	NA	NA	NA	NA	NA
AWO57316.1|2868725_2868938_-	cold-shock protein CspJ	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
AWO57317.1|2869392_2870661_-	protein UmuC	NA	I6RSM4	Salmonella_phage	92.2	4.2e-227
AWO57318.1|2870663_2871083_-	protein UmuD	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
AWO57319.1|2871209_2871371_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57320.1|2871348_2871591_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57321.1|2872564_2872777_+	hypothetical protein	NA	A0A192Y5V6	Salmonella_phage	100.0	2.7e-30
AWO57322.1|2872773_2873187_+	hypothetical protein	NA	A0A192Y6F0	Salmonella_phage	100.0	2.9e-73
AWO57323.1|2873422_2873656_+	hypothetical protein	NA	A0A192Y6D5	Salmonella_phage	100.0	1.2e-36
AWO57324.1|2873769_2874375_-|tail	tail fiber assembly protein	tail	A0A192Y8L2	Salmonella_phage	100.0	2.7e-107
AWO57325.1|2874344_2875907_-|tail	phage tail protein	tail	A0A192Y7M1	Salmonella_phage	100.0	1.0e-288
AWO57326.1|2875893_2876481_-	DUF2313 domain-containing protein	NA	A0A192Y5V3	Salmonella_phage	100.0	2.9e-114
AWO57327.1|2876483_2877563_-|plate	phage baseplate protein	plate	A0A192Y6E4	Salmonella_phage	100.0	2.9e-205
AWO57328.1|2877555_2877969_-	hypothetical protein	NA	A0A192Y6D0	Salmonella_phage	100.0	3.1e-75
AWO57329.1|2877973_2878507_-|plate	phage baseplate assembly protein V	plate	A0A192Y8K5	Salmonella_phage	100.0	8.4e-97
AWO57330.1|2878506_2879565_-|plate	baseplate protein	plate	A0A192Y7L7	Salmonella_phage	100.0	1.3e-202
AWO57331.1|2879561_2880902_-	DNA circularization protein	NA	A0A192Y5U9	Salmonella_phage	100.0	5.2e-252
AWO57332.1|2880935_2882864_-|tail	phage tail tape measure protein	tail	A0A192Y6D8	Salmonella_phage	100.0	0.0e+00
AWO57333.1|2882948_2883275_-|tail	phage tail assembly protein	tail	A0A192Y6C5	Salmonella_phage	100.0	1.3e-52
AWO57334.1|2883271_2883628_-|tail	phage tail protein	tail	A0A192Y8K0	Salmonella_phage	100.0	2.6e-62
AWO57335.1|2883627_2885124_-|tail	phage tail protein	tail	A0A192Y7L1	Salmonella_phage	100.0	2.1e-278
AWO57336.1|2885113_2885278_-	DUF2635 domain-containing protein	NA	A0A1C9II04	Salmonella_phage	100.0	1.3e-24
AWO57337.1|2885281_2885842_-	hypothetical protein	NA	A0A192Y5U4	Salmonella_phage	100.0	8.0e-106
AWO57338.1|2885838_2886351_-	hypothetical protein	NA	A0A192Y6D2	Salmonella_phage	100.0	3.5e-92
AWO57339.1|2886322_2886727_-|head,tail	head-tail adaptor protein	head,tail	A0A192Y6C2	Salmonella_phage	100.0	3.2e-72
AWO57340.1|2886723_2887047_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A192Y8J4	Salmonella_phage	100.0	6.3e-55
AWO57341.1|2887049_2887250_-	hypothetical protein	NA	A0A192Y7K5	Salmonella_phage	100.0	1.8e-28
AWO57342.1|2887300_2888506_-|capsid	phage major capsid protein	capsid	A0A192Y5T6	Salmonella_phage	100.0	7.0e-224
AWO57343.1|2888520_2889207_-|head,protease	HK97 family phage prohead protease	head,protease	Q8HAD3	Salmonella_phage	100.0	6.5e-126
AWO57344.1|2889148_2890390_-|portal	phage portal protein	portal	Q8HAD4	Salmonella_phage	99.3	2.9e-241
AWO57345.1|2890389_2890572_-	hypothetical protein	NA	Q8HAD5	Salmonella_phage	100.0	1.0e-25
AWO57346.1|2890583_2892317_-|terminase	terminase large subunit	terminase	U5P0Q5	Shigella_phage	98.3	0.0e+00
AWO57347.1|2892313_2892817_-|terminase	phage terminase small subunit P27 family	terminase	A0A1B3B2F4	Salmonella_phage	100.0	1.0e-88
AWO57348.1|2892933_2893284_-	HNH endonuclease	NA	M1FQV2	Enterobacteria_phage	94.8	9.8e-62
AWO59350.1|2893334_2893667_-	hypothetical protein	NA	A0A192Y5Y1	Salmonella_phage	100.0	2.8e-58
AWO57349.1|2894129_2894522_-	DUF2570 domain-containing protein	NA	A0A192Y6H8	Salmonella_phage	100.0	2.8e-65
AWO57350.1|2894518_2895133_-	glycoside hydrolase family 19 protein	NA	A0A192Y6G4	Salmonella_phage	100.0	5.7e-113
AWO57351.1|2895132_2895414_-|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	45.2	9.7e-20
AWO57352.1|2895400_2895787_-	hypothetical protein	NA	A0A192Y8P2	Salmonella_phage	100.0	7.0e-61
AWO59351.1|2895932_2896190_-	hypothetical protein	NA	A0A1C9IHX4	Salmonella_phage	100.0	3.1e-41
AWO57353.1|2896340_2897093_-	antitermination protein	NA	A0A192Y5X6	Salmonella_phage	100.0	1.8e-145
AWO59352.1|2897106_2898096_-	DUF968 domain-containing protein	NA	A0A1C9IHZ5	Salmonella_phage	99.1	4.0e-193
AWO57354.1|2898103_2899009_-	KilA-N domain-containing protein	NA	Q8HA92	Salmonella_phage	99.7	1.1e-162
AWO57355.1|2898980_2899370_-	RusA family crossover junction endodeoxyribonuclease	NA	Q8HA93	Salmonella_phage	100.0	3.7e-70
AWO57356.1|2899366_2900260_-	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	100.0	7.6e-175
AWO57357.1|2900259_2900784_-	PerC family transcriptional regulator	NA	Q8HA95	Salmonella_phage	100.0	2.4e-96
AWO57358.1|2900743_2901562_-	helix-turn-helix domain-containing protein	NA	Q8HA96	Salmonella_phage	100.0	2.8e-136
AWO57359.1|2901558_2901783_-	hypothetical protein	NA	A0A1C9II64	Salmonella_phage	100.0	3.3e-39
AWO57360.1|2901779_2902937_-	peptidase	NA	Q8HA97	Salmonella_phage	100.0	4.2e-218
AWO57361.1|2902933_2903488_-	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	100.0	6.9e-102
AWO57362.1|2903516_2903741_-	XRE family transcriptional regulator	NA	A0A1C9IHV8	Salmonella_phage	100.0	1.9e-34
AWO57363.1|2903679_2903865_-	amino acid permease	NA	NA	NA	NA	NA
AWO57364.1|2903838_2904534_+	helix-turn-helix transcriptional regulator	NA	Q8HAA0	Salmonella_phage	100.0	3.2e-128
AWO57365.1|2904739_2905078_+	hypothetical protein	NA	A0A1C9IHZ4	Salmonella_phage	100.0	7.0e-57
AWO57366.1|2905040_2905457_-	hypothetical protein	NA	A0A1C9IHY8	Salmonella_phage	100.0	6.4e-76
AWO57367.1|2905521_2905707_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57368.1|2905804_2906176_+	hypothetical protein	NA	A0A192Y6G0	Salmonella_phage	100.0	2.5e-63
AWO57369.1|2906233_2907061_+	DUF2303 domain-containing protein	NA	A0A192Y6E5	Salmonella_phage	100.0	2.6e-153
AWO57370.1|2907197_2907737_+	hypothetical protein	NA	A0A192Y8M4	Salmonella_phage	100.0	2.6e-98
AWO57371.1|2907807_2908341_+	hypothetical protein	NA	A0A192Y7N1	Salmonella_phage	100.0	2.5e-101
AWO57372.1|2908342_2908600_+	hypothetical protein	NA	A0A192Y5W0	Salmonella_phage	100.0	1.3e-42
AWO57373.1|2908610_2909192_+	molecular chaperone DnaJ	NA	A0A192Y6F5	Salmonella_phage	100.0	4.7e-109
AWO57374.1|2909195_2909765_+	3'-5' exoribonuclease	NA	A0A192Y6E0	Salmonella_phage	100.0	7.1e-110
AWO57375.1|2909789_2910032_+	DUF4224 domain-containing protein	NA	Q8HAA9	Salmonella_phage	100.0	9.5e-40
AWO57376.1|2910033_2911023_+|integrase	integrase	integrase	A0A192Y7M7	Salmonella_phage	100.0	8.6e-196
AWO57377.1|2911314_2912112_+	protein MtfA	NA	NA	NA	NA	NA
AWO57378.1|2912483_2912774_+	DUF4102 domain-containing protein	NA	H2BDA3	Pseudomonas_phage	49.1	3.0e-08
AWO57379.1|2913421_2913895_+	peptidase	NA	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	77.6	7.1e-39
2915518:2915533	attR	TGAAAATATCGATTTT	NA	NA	NA	NA
>prophage 8
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	3000600	3011106	4933522		Enterobacteria_phage(37.5%)	10	NA	NA
AWO57465.1|3000600_3001914_-	LPS biosynthesis protein	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
AWO57466.1|3001940_3003020_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.1	6.6e-16
AWO57467.1|3003024_3003798_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AWO57468.1|3003794_3004787_-	protein RfbI	NA	NA	NA	NA	NA
AWO57469.1|3004792_3005344_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	2.2e-52
AWO57470.1|3005344_3006223_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.5	9.3e-109
AWO57471.1|3006270_3007170_-	NAD(P)-dependent oxidoreductase	NA	A0A291LA50	Escherichia_phage	36.3	1.4e-30
AWO57472.1|3007169_3008255_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.2e-102
AWO57473.1|3008631_3009525_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
AWO57474.1|3009702_3011106_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	27.1	3.1e-21
>prophage 9
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	3079414	3088585	4933522	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
AWO57529.1|3079414_3081448_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
AWO57530.1|3081688_3082147_+	DUF1307 domain-containing protein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
AWO57531.1|3082318_3082849_+	DUF1307 domain-containing protein	NA	NA	NA	NA	NA
AWO57532.1|3082905_3083373_-	DUF1456 domain-containing protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AWO57533.1|3083419_3084139_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AWO57534.1|3084135_3085821_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.1	6.2e-279
AWO57535.1|3086043_3086775_+	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AWO57536.1|3086834_3086942_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57537.1|3086922_3087654_-	ABC transporter permease	NA	NA	NA	NA	NA
AWO57538.1|3087637_3088585_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
>prophage 10
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	3160468	3172759	4933522	tail,holin	Salmonella_phage(45.45%)	11	NA	NA
AWO57606.1|3160468_3160972_-	DNA polymerase V	NA	Q1MVE7	Enterobacteria_phage	71.3	9.5e-50
AWO57607.1|3160999_3161290_+	DinI family protein	NA	S4TND2	Salmonella_phage	83.3	4.7e-25
AWO57608.1|3161637_3163467_+	acyltransferase	NA	C6ZR20	Salmonella_phage	29.6	3.0e-61
AWO57609.1|3163520_3163964_-|tail	tail assembly chaperone	tail	A0A0F7LDZ0	Escherichia_phage	43.9	1.4e-28
AWO57610.1|3164341_3164869_-|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	31.3	3.1e-11
AWO57611.1|3164871_3166113_-	hypothetical protein	NA	Q8HAB4	Salmonella_phage	95.3	1.0e-52
AWO57612.1|3166705_3167035_-|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	94.6	3.9e-36
AWO57613.1|3167331_3168663_+	NTPase	NA	R9TRQ8	Vibrio_phage	28.5	2.1e-19
AWO57614.1|3168691_3169060_-	antitermination protein Q	NA	A5LH77	Enterobacteria_phage	81.7	7.4e-52
AWO59361.1|3169074_3170064_-	DUF968 domain-containing protein	NA	A0A1C9IHZ5	Salmonella_phage	97.3	6.0e-189
AWO57615.1|3170392_3172759_-	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	NA	Q9MBL9	Phage_Gifsy-2	88.7	2.9e-72
>prophage 11
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	3513804	3613668	4933522	terminase,integrase,head,tRNA,lysis,holin,transposase,tail,portal,capsid	Salmonella_phage(36.84%)	108	3547404:3547419	3570371:3570386
AWO57923.1|3513804_3514536_-|tRNA	tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ	tRNA	NA	NA	NA	NA
AWO57924.1|3514654_3515458_+	inositol monophosphatase	NA	NA	NA	NA	NA
AWO57925.1|3515602_3516481_+	alpha/beta hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	24.7	3.5e-15
AWO57926.1|3516662_3517706_+	sulfite reductase subunit alpha	NA	NA	NA	NA	NA
AWO57927.1|3517709_3518528_+	anaerobic sulfite reductase subunit B	NA	NA	NA	NA	NA
AWO57928.1|3518538_3519552_+	anaerobic sulfite reductase subunit AsrC	NA	NA	NA	NA	NA
AWO57929.1|3519552_3520539_-	nickel transporter	NA	NA	NA	NA	NA
AWO59371.1|3520529_3521168_-	DUF1007 domain-containing protein	NA	NA	NA	NA	NA
AWO57930.1|3521293_3522571_+	stationary phase inducible protein CsiE	NA	NA	NA	NA	NA
AWO57931.1|3522565_3523705_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA	NA
AWO57932.1|3523900_3525154_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	1.3e-100
AWO57933.1|3525478_3526669_+	flavohemoprotein	NA	NA	NA	NA	NA
AWO57934.1|3526850_3528395_+	transcriptional regulator CadC	NA	NA	NA	NA	NA
AWO57935.1|3528755_3530087_+	cadaverine/lysine antiporter	NA	NA	NA	NA	NA
AWO57936.1|3530169_3532314_+	lysine decarboxylase CadA	NA	NA	NA	NA	NA
AWO57937.1|3532369_3533830_+	dipeptide permease	NA	A0A0P0IY73	Acinetobacter_phage	28.8	1.7e-46
AWO57938.1|3533878_3534217_-	nitrogen regulatory protein P-II 1	NA	NA	NA	NA	NA
AWO57939.1|3534293_3535631_-	two-component system response regulator GlrR	NA	W8CYM9	Bacillus_phage	29.2	1.8e-10
AWO57940.1|3535627_3536392_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA	NA
AWO57941.1|3536393_3537779_-	two component system sensor histidine kinase QseE/GlrK	NA	W8CYF6	Bacillus_phage	26.1	1.9e-15
AWO57942.1|3538473_3542361_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	57.6	1.4e-127
AWO57943.1|3542382_3542616_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57944.1|3542616_3544161_+	lytic transglycosylase F	NA	NA	NA	NA	NA
AWO57945.1|3544211_3544763_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
AWO57946.1|3544787_3545423_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA	NA
AWO57947.1|3545426_3546788_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
AWO57948.1|3546798_3547692_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA	NA
3547404:3547419	attL	CGACGACCAGACCGTG	NA	NA	NA	NA
AWO57949.1|3547807_3548656_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AWO57950.1|3548694_3549612_-	oxidoreductase	NA	NA	NA	NA	NA
AWO57951.1|3549633_3550830_-	MFS transporter	NA	NA	NA	NA	NA
AWO57952.1|3550945_3551872_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	24.4	3.0e-09
AWO57953.1|3551909_3552170_+	ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	52.3	1.4e-17
AWO57954.1|3552281_3552662_-	holo-ACP synthase	NA	NA	NA	NA	NA
AWO57955.1|3552661_3553393_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AWO57956.1|3553404_3554133_-	DNA repair protein RecO	NA	NA	NA	NA	NA
AWO57957.1|3554144_3555050_-	GTPase Era	NA	NA	NA	NA	NA
AWO59372.1|3555046_3555727_-	ribonuclease 3	NA	A0A2K9L5P0	Tupanvirus	31.8	7.4e-21
AWO57958.1|3556000_3556975_-	S26 family signal peptidase	NA	NA	NA	NA	NA
AWO57959.1|3556991_3558791_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.9	7.2e-23
AWO57960.1|3559195_3560689_+	type III secretion system protein	NA	Q9MBM1	Phage_Gifsy-1	100.0	3.4e-260
AWO57961.1|3561149_3561287_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57962.1|3561533_3562079_+|transposase	transposase	transposase	NA	NA	NA	NA
AWO57963.1|3561999_3562164_-|integrase	integrase	integrase	NA	NA	NA	NA
AWO59373.1|3562743_3562809_-	DUF4113 domain-containing protein	NA	NA	NA	NA	NA
AWO57964.1|3562871_3563084_-	hypothetical protein	NA	S4TTF2	Salmonella_phage	90.6	3.8e-08
AWO57965.1|3563190_3563418_+	phage virulence factor	NA	NA	NA	NA	NA
AWO57966.1|3563514_3564093_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	88.9	3.6e-93
AWO57967.1|3564082_3564907_-|tail	phage tail protein	tail	A0A0M4QWS3	Salmonella_phage	92.0	1.2e-145
AWO57968.1|3564903_3567276_-|tail	phage tail protein	tail	A0A0K2FIZ6	Escherichia_phage	65.4	2.0e-89
AWO57969.1|3567329_3567572_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57970.1|3567610_3570973_-	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	79.7	0.0e+00
3570371:3570386	attR	CGACGACCAGACCGTG	NA	NA	NA	NA
AWO57971.1|3571034_3571682_-|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	77.2	7.8e-89
AWO57972.1|3571579_3572317_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	85.0	5.2e-129
AWO57973.1|3572323_3573022_-|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	76.3	5.5e-104
AWO57974.1|3573031_3573361_-|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	70.4	1.3e-42
AWO57975.1|3573363_3576459_-|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	61.6	1.1e-276
AWO57976.1|3576430_3576769_-|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	62.4	1.3e-31
AWO57977.1|3576765_3577161_-|tail	phage minor tail protein G	tail	A5LH36	Enterobacteria_phage	56.5	2.3e-30
AWO57978.1|3577211_3577958_-|tail	phage tail protein	tail	A0A291AWU6	Escherichia_phage	76.9	1.9e-99
AWO57979.1|3577965_3578367_-|tail	phage tail protein	tail	Q9G0F3	Phage_Gifsy-1	99.0	4.0e-51
AWO57980.1|3578363_3578942_-|tail	phage tail protein	tail	A5LH33	Enterobacteria_phage	80.2	3.7e-82
AWO57981.1|3578928_3579306_-|tail	phage tail protein	tail	A0A0K2FJB7	Enterobacteria_phage	55.6	1.5e-28
AWO57982.1|3579316_3579682_-	DNA packaging protein	NA	NA	NA	NA	NA
AWO57983.1|3579739_3580768_-|capsid	minor capsid protein E	capsid	C6ZCY2	Enterobacteria_phage	61.1	1.3e-114
AWO57984.1|3580822_3581170_-|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	52.7	9.2e-20
AWO57985.1|3581182_3582679_-	S49 family peptidase	NA	A0A0K2FI53	Enterobacteria_phage	52.2	1.1e-96
AWO57986.1|3582668_3584249_-|portal	phage portal protein	portal	K7P6U7	Enterobacteria_phage	62.8	9.6e-189
AWO57987.1|3584245_3584449_-|tail	phage tail protein	tail	K7PM10	Enterobacteria_phage	73.8	1.9e-17
AWO57988.1|3584432_3586364_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	65.9	1.3e-259
AWO57989.1|3586335_3586881_-|terminase	terminase small subunit	terminase	A0A0U2S671	Escherichia_phage	80.6	1.5e-56
AWO57990.1|3586925_3587132_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57991.1|3587166_3587568_+	inhibitor of g-type lysozyme	NA	NA	NA	NA	NA
AWO57992.1|3587824_3588328_-	hypothetical protein	NA	NA	NA	NA	NA
AWO59374.1|3588655_3589102_-|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	83.9	9.3e-57
AWO57993.1|3589134_3589749_-	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	93.6	2.2e-109
AWO57994.1|3589748_3590030_-|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	80.6	2.6e-36
AWO57995.1|3590016_3590406_-	hypothetical protein	NA	K7PHB9	Enterobacterial_phage	72.5	4.8e-41
AWO57996.1|3590495_3590684_-	hypothetical protein	NA	NA	NA	NA	NA
AWO57997.1|3590738_3590930_+	hypothetical protein	NA	NA	NA	NA	NA
AWO57998.1|3591210_3591636_-	subtilase cytotoxin subunit B-like protein	NA	NA	NA	NA	NA
AWO57999.1|3591768_3592494_-	pertussis toxin-like subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	66.2	4.0e-81
AWO58000.1|3592694_3593273_-	DUF1133 domain-containing protein	NA	A0A0U2S606	Escherichia_phage	57.2	1.1e-49
AWO59375.1|3593287_3594277_-	DUF968 domain-containing protein	NA	A0A1C9IHZ5	Salmonella_phage	97.3	3.5e-189
AWO58001.1|3594284_3595190_-	KilA-N domain-containing protein	NA	Q8HA92	Salmonella_phage	99.3	9.7e-162
AWO58002.1|3595161_3595551_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A192Y8N5	Salmonella_phage	97.7	1.6e-68
AWO58003.1|3596439_3596922_-	PerC family transcriptional regulator	NA	Q8HA95	Salmonella_phage	97.5	1.8e-85
AWO58004.1|3596923_3597883_-	helix-turn-helix domain-containing protein	NA	U5P0A0	Shigella_phage	80.9	1.2e-117
AWO58005.1|3597879_3598104_-	hypothetical protein	NA	A0A1C9II64	Salmonella_phage	100.0	3.3e-39
AWO58006.1|3598100_3599243_-	peptidase	NA	A0A1C9IHV9	Salmonella_phage	98.2	1.0e-208
AWO58007.1|3599239_3599794_-	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	99.5	1.2e-101
AWO58008.1|3599822_3600047_-	XRE family transcriptional regulator	NA	A0A1C9IHV8	Salmonella_phage	100.0	1.9e-34
AWO58009.1|3599985_3600171_-	amino acid permease	NA	NA	NA	NA	NA
AWO58010.1|3600144_3600840_+	helix-turn-helix transcriptional regulator	NA	Q8HAA0	Salmonella_phage	99.6	4.6e-127
AWO58011.1|3601193_3601352_+	hypothetical protein	NA	H6WRX3	Salmonella_phage	100.0	2.4e-23
AWO58012.1|3601373_3601724_+	DNA breaking-rejoining protein	NA	S4TSN6	Salmonella_phage	98.3	6.4e-61
AWO58013.1|3601850_3604778_+	exodeoxyribonuclease	NA	H6WRX1	Salmonella_phage	98.2	0.0e+00
AWO58014.1|3604740_3605898_+	enterohemolysin	NA	S4TTE8	Salmonella_phage	99.7	4.7e-217
AWO58015.1|3605940_3606180_+	DUF4060 domain-containing protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
AWO58016.1|3606220_3606505_+	excisionase Xis	NA	H6WRW8	Salmonella_phage	86.2	3.1e-42
AWO58017.1|3606482_3607712_-	DUF4102 domain-containing protein	NA	H6WRW7	Salmonella_phage	93.9	5.4e-232
AWO58018.1|3608063_3608180_-	transcriptional regulator	NA	NA	NA	NA	NA
AWO58019.1|3608209_3608689_-	SoxR-reducing system protein RseC	NA	NA	NA	NA	NA
AWO58020.1|3608685_3609642_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA	NA
AWO58021.1|3609641_3610292_-	anti-sigma-E factor RseA	NA	NA	NA	NA	NA
AWO58022.1|3610323_3610899_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
AWO58023.1|3611059_3611239_-	hypothetical protein	NA	NA	NA	NA	NA
AWO58024.1|3611323_3612946_+	L-aspartate oxidase	NA	NA	NA	NA	NA
AWO58025.1|3612930_3613668_-|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase	tRNA	NA	NA	NA	NA
>prophage 12
CP029595	Salmonella enterica strain DA34833 chromosome, complete genome	4933522	4844063	4886756	4933522	integrase,transposase,tRNA	Escherichia_phage(25.0%)	42	4847812:4847826	4875830:4875844
AWO59148.1|4844063_4845428_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
AWO59149.1|4845631_4846849_+|integrase	site-specific integrase	integrase	H7BUI8	unidentified_phage	28.3	6.3e-15
AWO59150.1|4846845_4847214_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AWO59151.1|4847571_4848525_-	replication protein	NA	NA	NA	NA	NA
4847812:4847826	attL	ATAAATATCCATCGC	NA	NA	NA	NA
AWO59430.1|4848511_4848739_-	DNA-binding protein	NA	NA	NA	NA	NA
AWO59152.1|4848889_4851649_-	conjugal transfer protein TraN	NA	NA	NA	NA	NA
AWO59153.1|4851745_4852279_-	regulator	NA	NA	NA	NA	NA
AWO59154.1|4852281_4852893_-	hypothetical protein	NA	NA	NA	NA	NA
AWO59155.1|4852892_4853114_-	hypothetical protein	NA	NA	NA	NA	NA
AWO59156.1|4853288_4853579_+	hypothetical protein	NA	NA	NA	NA	NA
AWO59157.1|4853598_4853853_-	hypothetical protein	NA	NA	NA	NA	NA
AWO59158.1|4853852_4857257_-	conjugal transfer protein TraG	NA	NA	NA	NA	NA
AWO59159.1|4857260_4858685_-	conjugal transfer protein TraH	NA	NA	NA	NA	NA
AWO59160.1|4858928_4859786_+	hypothetical protein	NA	NA	NA	NA	NA
AWO59161.1|4859782_4860178_+	hypothetical protein	NA	NA	NA	NA	NA
AWO59162.1|4860592_4860862_-	hypothetical protein	NA	NA	NA	NA	NA
AWO59163.1|4860939_4861125_-	hypothetical protein	NA	NA	NA	NA	NA
AWO59164.1|4862010_4862883_-|integrase	integrase	integrase	NA	NA	NA	NA
AWO59165.1|4863951_4865613_-	ATP-dependent helicase	NA	S5MMD7	Bacillus_phage	22.8	7.1e-09
AWO59166.1|4865609_4867535_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
AWO59167.1|4867612_4870156_-	subtilase	NA	NA	NA	NA	NA
AWO59168.1|4870176_4871166_-	ATP-binding protein	NA	NA	NA	NA	NA
AWO59169.1|4871244_4871829_-	recombinase family protein	NA	E5FFF9	Burkholderia_phage	58.1	5.5e-49
AWO59170.1|4871852_4872164_-|transposase	transposase	transposase	NA	NA	NA	NA
AWO59171.1|4872102_4873116_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
AWO59431.1|4873261_4874053_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
AWO59172.1|4874216_4874564_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
AWO59173.1|4874557_4875529_+	dihydropteroate synthase	NA	NA	NA	NA	NA
AWO59174.1|4875745_4876960_+	chloramphenicol/florfenicol efflux MFS transporter FloR	NA	S4TR35	Salmonella_phage	29.1	2.5e-19
4875830:4875844	attR	GCGATGGATATTTAT	NA	NA	NA	NA
AWO59175.1|4876987_4877170_+	DUF3363 domain-containing protein	NA	NA	NA	NA	NA
AWO59176.1|4877166_4877793_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AWO59177.1|4877896_4879072_+	tetracycline efflux MFS transporter Tet(G)	NA	NA	NA	NA	NA
AWO59178.1|4879092_4879884_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AWO59179.1|4879975_4881508_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
AWO59180.1|4881734_4882388_-	molecular chaperone GroEL	NA	A0A2I7SAK5	Vibrio_phage	58.1	1.1e-21
AWO59432.1|4882593_4883460_+	PSE family carbenicillin-hydrolyzing class A beta-lactamase CARB-2	NA	A0A077SL40	Escherichia_phage	44.1	4.8e-57
AWO59181.1|4883676_4884024_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
AWO59182.1|4884017_4884857_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA	NA
AWO59183.1|4884786_4884966_-	hypothetical protein	NA	NA	NA	NA	NA
AWO59184.1|4884984_4885485_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AWO59185.1|4885790_4885904_-	NTP-binding protein	NA	NA	NA	NA	NA
AWO59186.1|4885991_4886756_+|transposase	IS6 family transposase IS6100	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
>prophage 1
CP029596	Salmonella enterica strain DA34833 plasmid pDA34833-94, complete sequence	94001	52462	61758	94001	transposase	Escherichia_phage(28.57%)	12	NA	NA
AWO59497.1|52462_53143_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.4	1.6e-28
AWO59498.1|53287_53476_-	hypothetical protein	NA	NA	NA	NA	NA
AWO59499.1|53524_53881_-	hypothetical protein	NA	NA	NA	NA	NA
AWO59500.1|53873_54344_-	hypothetical protein	NA	NA	NA	NA	NA
AWO59501.1|54854_55277_+	protein SamA	NA	A0A1W6JNS2	Morganella_phage	51.6	1.0e-28
AWO59502.1|55276_56551_+	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	64.9	3.9e-156
AWO59503.1|56632_57610_-	ParB/RepB/Spo0J family partition protein	NA	A0A1B0V750	Salmonella_phage	53.2	5.2e-84
AWO59504.1|57606_58812_-	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.3	1.5e-162
AWO59505.1|59226_60168_+|transposase	ISNCY family transposase	transposase	Q2A0A7	Sodalis_phage	54.3	2.0e-72
AWO59506.1|60199_60766_-	DUF2913 domain-containing protein	NA	NA	NA	NA	NA
AWO59507.1|60822_61158_-	hypothetical protein	NA	NA	NA	NA	NA
AWO59544.1|61341_61758_-	hypothetical protein	NA	O64348	Escherichia_phage	42.9	8.2e-07
