The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029461	Bacillus subtilis strain QB61 chromosome, complete genome	4120380	587687	596053	4120380		Synechococcus_phage(50.0%)	8	NA	NA
AWM19909.1|587687_588983_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.4	1.3e-18
AWM19910.1|589056_589782_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3G7P8	Synechococcus_phage	44.1	5.4e-46
AWM19911.1|589774_590029_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AWM19912.1|590025_590709_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
AWM19913.1|590692_592921_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.0	1.5e-158
AWM19914.1|592896_594327_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.5	1.2e-52
AWM19915.1|594428_595469_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	42.0	2.8e-64
AWM19916.1|595465_596053_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	41.0	2.4e-28
>prophage 2
CP029461	Bacillus subtilis strain QB61 chromosome, complete genome	4120380	1104027	1137929	4120380	coat,tRNA	Planktothrix_phage(20.0%)	39	NA	NA
AWM23162.1|1104027_1105020_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
AWM20379.1|1105763_1107401_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AWM20380.1|1107508_1108444_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
AWM20381.1|1108447_1109365_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
AYA42949.1|1109369_1110446_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	2.1e-17
AWM20382.1|1110447_1111365_+	oligopeptide transport ATP-binding protein OppF	NA	M1HP82	Acanthocystis_turfacea_Chlorella_virus	24.6	1.2e-05
AYA42950.1|1111471_1112689_+	MFS transporter	NA	NA	NA	NA	NA
AWM20383.1|1112852_1113431_+	N-acetyltransferase	NA	NA	NA	NA	NA
AWM20384.1|1113611_1114007_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
AWM20385.1|1114049_1114706_-	TerC family protein	NA	A0A2R2YAT9	Pseudomonas_phage	38.0	1.1e-29
AWM20386.1|1114982_1115639_+	adaptor protein MecA	NA	NA	NA	NA	NA
AWM20387.1|1115799_1116951_+	competence protein CoiA	NA	NA	NA	NA	NA
AWM20388.1|1116997_1119010_+	oligoendopeptidase F	NA	NA	NA	NA	NA
AWM20389.1|1119047_1119215_-	hypothetical protein	NA	NA	NA	NA	NA
AWM20390.1|1119310_1119514_-	hypothetical protein	NA	NA	NA	NA	NA
AWM20391.1|1119528_1120428_-	DsbA family protein	NA	NA	NA	NA	NA
AWM20392.1|1120424_1120823_-	group 2 truncated hemoglobin YjbI	NA	NA	NA	NA	NA
AWM23163.1|1121077_1121623_-	lytic transglycosylase domain-containing protein	NA	A0A1P8CWQ1	Bacillus_phage	60.4	3.7e-39
AWM20393.1|1121826_1122399_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
AWM20394.1|1122523_1122892_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20395.1|1122920_1123556_+	GTP pyrophosphokinase YjbM	NA	NA	NA	NA	NA
AWM20396.1|1123574_1124375_+	NAD(+) kinase	NA	NA	NA	NA	NA
AWM23164.1|1124437_1125289_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AWM20397.1|1125301_1126036_-	bis(5'-nucleosyl)-tetraphosphatase PrpE	NA	M4Q4T6	Vibrio_phage	23.7	5.0e-07
AWM20398.1|1126270_1128115_+	sodium:proton antiporter	NA	NA	NA	NA	NA
AWM20399.1|1128363_1129074_+	thiaminase II	NA	NA	NA	NA	NA
AWM20400.1|1129048_1129666_+	thiazole tautomerase TenI	NA	NA	NA	NA	NA
AWM20401.1|1129649_1130759_+	glycine oxidase ThiO	NA	NA	NA	NA	NA
AWM23165.1|1130758_1130959_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
AWM20402.1|1130955_1131726_+	thiazole synthase	NA	NA	NA	NA	NA
AWM20403.1|1131722_1132733_+	thiazole biosynthesis adenylyltransferase ThiF	NA	NA	NA	NA	NA
AWM20404.1|1132751_1133567_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
AWM20405.1|1133702_1134479_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AWM20406.1|1134579_1135263_+|coat	spore coat protein	coat	NA	NA	NA	NA
AWM20407.1|1135355_1135805_-|coat	spore coat protein	coat	NA	NA	NA	NA
AWM20408.1|1135932_1136421_-|coat	spore coat protein	coat	NA	NA	NA	NA
AWM20409.1|1136572_1137085_-|coat	spore coat protein	coat	NA	NA	NA	NA
AWM20410.1|1137179_1137503_-|coat	spore coat protein	coat	NA	NA	NA	NA
AWM20411.1|1137542_1137929_-|coat	spore coat protein	coat	NA	NA	NA	NA
>prophage 3
CP029461	Bacillus subtilis strain QB61 chromosome, complete genome	4120380	1202313	1276281	4120380	terminase,holin,plate,portal,tRNA,protease	Bacillus_phage(24.39%)	84	NA	NA
AWM20473.1|1202313_1203585_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	A0A1V0SEI6	Indivirus	37.1	8.6e-15
AWM20474.1|1203729_1204866_+	tetratricopeptide repeat protein	NA	A0A1P8CWN8	Bacillus_phage	47.4	8.3e-94
AWM20475.1|1204855_1204990_+	phosphatase RapA inhibitor PhrA	NA	NA	NA	NA	NA
AWM20476.1|1205020_1205278_-	hypothetical protein	NA	NA	NA	NA	NA
AWM20477.1|1205398_1206352_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A218KC88	Bacillus_phage	74.1	7.3e-67
AWM20478.1|1206391_1206769_-	PH domain-containing protein	NA	A5GYQ0	Lactococcus_phage	42.3	6.1e-17
AWM20479.1|1206874_1207477_+	hypothetical protein	NA	F8WQ53	Bacillus_phage	49.2	3.8e-45
AWM20480.1|1207553_1208390_+	manganese catalase family protein	NA	NA	NA	NA	NA
AWM20481.1|1208433_1209030_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4JA43	uncultured_Caudovirales_phage	51.7	8.1e-40
AWM20482.1|1209192_1209534_-	transcriptional regulator	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	45.8	1.3e-18
AWM20483.1|1209711_1209891_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20484.1|1209877_1210714_+	phage-like element PBSX protein XkdB	NA	S6BFM4	Thermus_phage	28.2	1.8e-24
AWM20485.1|1210613_1211414_+	ATP-binding protein	NA	A6XMI1	Bacillus_virus	51.7	5.0e-61
AWM20486.1|1211413_1211581_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20487.1|1211665_1212016_+	phage-like element PBSX protein XkdD	NA	NA	NA	NA	NA
AWM20488.1|1212019_1212214_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AWM20489.1|1212334_1212844_+	positive control factor	NA	A0A1L2JY33	Aeribacillus_phage	38.6	1.9e-21
AWM20490.1|1212959_1213757_+|terminase	PBSX phage terminase small subunit	terminase	A0A0S2MVB6	Bacillus_phage	50.2	8.0e-59
AWM20491.1|1213753_1215055_+|terminase	PBSX family phage terminase large subunit	terminase	A0A2P1JTW5	Anoxybacillus_phage	60.5	8.2e-154
AWM20492.1|1215058_1216546_+	phage-like element PBSX protein XkdE	NA	A0A1B1P7C8	Bacillus_phage	55.7	1.7e-139
AWM20493.1|1216565_1217393_+|portal	phage portal protein	portal	A0A1B1P7E4	Bacillus_phage	59.2	1.6e-54
AWM20494.1|1217418_1218354_+	phage-like element PBSX protein XkdG	NA	A0A1B1P7E3	Bacillus_phage	63.8	1.1e-104
AWM20495.1|1218375_1218759_+	DUF3199 family protein	NA	A0A1B1P7D6	Bacillus_phage	40.5	1.4e-13
AWM20496.1|1218755_1219112_+	phage-like element PBSX protein XkdH	NA	NA	NA	NA	NA
AWM20497.1|1219108_1219594_+	phage-like element PBSX protein XkdI	NA	A0A249XXA4	Clostridium_phage	47.0	2.1e-38
AWM20498.1|1219606_1220047_+|portal	phage portal protein	portal	NA	NA	NA	NA
AWM20499.1|1220050_1220269_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20500.1|1220265_1221666_+	phage-like element PBSX protein XkdK	NA	A0A0A7S087	Clostridium_phage	39.3	2.3e-77
AWM20501.1|1221667_1222111_+	phage-like element PBSX protein XkdM	NA	A0A0K2CNG3	Brevibacillus_phage	45.2	8.4e-26
AWM20502.1|1222201_1222648_+|portal	phage portal protein	portal	A0A0A7RTY8	Clostridium_phage	37.7	5.9e-11
AWM20503.1|1222689_1222830_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20504.1|1222830_1227912_+|portal	phage portal protein	portal	A0A1L2JY60	Aeribacillus_phage	43.8	1.1e-41
AWM20505.1|1227904_1228564_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0A8WJR4	Clostridium_phage	33.2	1.1e-24
AWM20506.1|1228579_1229557_+	phage-like element PBSX protein XkdQ	NA	H7BV96	unidentified_phage	32.6	1.0e-39
AWM20507.1|1229556_1229823_+	DUF2577 domain-containing protein	NA	S6C459	Thermus_phage	36.4	1.7e-05
AWM20508.1|1229880_1230306_+	DUF2634 domain-containing protein	NA	A0A2H4J6K5	uncultured_Caudovirales_phage	38.0	6.6e-12
AWM20509.1|1230298_1231345_+|plate	baseplate J/gp47 family protein	plate	S6AVU3	Thermus_phage	44.0	2.4e-71
AWM20510.1|1231328_1231907_+	DUF2313 domain-containing protein	NA	A0A2H4J717	uncultured_Caudovirales_phage	33.1	5.1e-15
AWM20511.1|1231903_1232176_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20512.1|1232178_1234620_+	hypothetical protein	NA	A0A2H4J4R1	uncultured_Caudovirales_phage	35.2	1.1e-21
AWM20513.1|1234637_1234964_+|portal	phage portal protein	portal	NA	NA	NA	NA
AWM20514.1|1234960_1235125_+	XkdX family protein	NA	A0A2H4JAA1	uncultured_Caudovirales_phage	67.9	1.9e-15
AWM23170.1|1235168_1236008_+|portal	phage portal protein	portal	NA	NA	NA	NA
AWM20515.1|1236060_1236330_+	protein xhlA	NA	A0A2H4JD40	uncultured_Caudovirales_phage	64.8	4.8e-24
AWM20516.1|1236342_1236606_+|holin	holin	holin	A0A2H4J6M0	uncultured_Caudovirales_phage	64.4	6.1e-24
AWM20517.1|1236618_1237512_+	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXD7	Bacillus_phage	69.2	5.2e-83
AWM20518.1|1237771_1237942_-	type II toxin-antitoxin system SpoIISB family antitoxin	NA	NA	NA	NA	NA
AWM20519.1|1237941_1238688_-	type II toxin-antitoxin system SpoIISA family toxin	NA	NA	NA	NA	NA
AWM20520.1|1238797_1239799_-	low-affinity inorganic phosphate transporter	NA	NA	NA	NA	NA
AWM20521.1|1239811_1240429_-	DUF47 domain-containing protein	NA	NA	NA	NA	NA
AWM20522.1|1240704_1242021_-	amino acid permease	NA	NA	NA	NA	NA
AWM20523.1|1242409_1243360_+	ring-cleaving dioxygenase	NA	NA	NA	NA	NA
AWM20524.1|1243576_1245727_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
AWM20525.1|1245738_1246710_+	glycosyltransferase	NA	A0A2H5BFL1	Salmonella_phage	41.0	1.9e-62
AWM20526.1|1247227_1248577_-|protease	serine protease HtrA	protease	A0A1B1IT49	uncultured_Mediterranean_phage	33.7	5.7e-25
AWM20527.1|1248745_1249564_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AWM20528.1|1249692_1250517_+	aminopeptidase	NA	NA	NA	NA	NA
AWM20529.1|1250533_1251460_+	ABC transporter permease	NA	NA	NA	NA	NA
AWM20530.1|1251465_1252428_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
AWM20531.1|1252432_1253440_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.7	2.4e-15
AWM23171.1|1253442_1255092_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AWM20532.1|1255179_1256139_+	murein peptide carboxypeptidase	NA	NA	NA	NA	NA
AWM20533.1|1256135_1257236_+	dipeptide epimerase	NA	NA	NA	NA	NA
AYA42954.1|1257232_1258123_+	gamma-D-glutamyl-L-lysine endopeptidase	NA	A0A0A8WIF2	Clostridium_phage	42.7	3.1e-19
AWM20534.1|1258135_1259125_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	3.2e-17
AWM20535.1|1259167_1260217_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
AWM20536.1|1260306_1261167_-	hypothetical protein	NA	NA	NA	NA	NA
AWM23172.1|1261326_1261845_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AWM20537.1|1262083_1263283_+	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
AWM20538.1|1263359_1263584_-	hypothetical protein	NA	NA	NA	NA	NA
AWM20539.1|1263728_1264460_+	DUF421 domain-containing protein	NA	NA	NA	NA	NA
AWM20540.1|1264551_1265079_+	DinB family protein	NA	NA	NA	NA	NA
AWM20541.1|1265068_1265587_+	N-acetyltransferase	NA	NA	NA	NA	NA
AWM20542.1|1265808_1266147_+	multidrug efflux SMR transporter subunit YkkC	NA	NA	NA	NA	NA
AWM20543.1|1266146_1266464_+	multidrug efflux SMR transporter subunit YkkD	NA	NA	NA	NA	NA
AWM20544.1|1266534_1267437_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AWM20545.1|1267787_1268885_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.8	9.6e-71
AWM20546.1|1268896_1270144_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	50.1	7.2e-99
AWM20547.1|1270269_1270695_+	organic hydroperoxide resistance protein OhrA	NA	NA	NA	NA	NA
AWM20548.1|1270725_1271169_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AWM20549.1|1271311_1271722_+	organic hydroperoxide resistance protein OhrB	NA	NA	NA	NA	NA
AWM20550.1|1271974_1272445_-|tRNA	tRNA-specific adenosine deaminase	tRNA	S4VYZ2	Pandoravirus	45.8	1.8e-26
AWM20551.1|1272617_1274906_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
AWM20552.1|1275321_1276281_-|protease	serine protease	protease	A0A127AWU5	Bacillus_phage	49.5	5.6e-75
>prophage 4
CP029461	Bacillus subtilis strain QB61 chromosome, complete genome	4120380	1747630	1843315	4120380	terminase,coat,integrase,portal,plate,holin,capsid,head,tail,tRNA,protease	Bacillus_phage(63.64%)	107	1754002:1754021	1838685:1838704
AYA42979.1|1747630_1748959_-|protease	serine protease	protease	A0A1B0T6A2	Bacillus_phage	33.2	1.6e-27
AWM20925.1|1749183_1749417_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20926.1|1749696_1750404_+	hypothetical protein	NA	F8WQ53	Bacillus_phage	56.9	3.2e-51
AWM20927.1|1750473_1750926_+	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AWM20928.1|1750939_1751293_-	multidrug resistance protein EbrB	NA	NA	NA	NA	NA
AWM20929.1|1751306_1751624_-	multidrug resistance protein EbrA	NA	NA	NA	NA	NA
AWM20930.1|1751759_1752035_-	hypothetical protein	NA	NA	NA	NA	NA
AWM20931.1|1752123_1752537_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20932.1|1752636_1753581_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AWM20933.1|1753620_1753842_+	RNA-binding protein Hfq	NA	NA	NA	NA	NA
1754002:1754021	attL	ATATTATGTATAAAATGAAT	NA	NA	NA	NA
AWM20934.1|1754037_1754310_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20935.1|1754391_1754622_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20936.1|1754864_1755257_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	G3MBF1	Bacillus_virus	58.3	2.5e-29
AWM20937.1|1755216_1757319_+	ribonucleotide-diphosphate reductase subunit alpha	NA	U5PY35	Bacillus_phage	86.8	0.0e+00
AWM20938.1|1757336_1758326_+	ribonucleoside-diphosphate reductase subunit beta	NA	F8WQ21	Bacillus_phage	83.5	1.9e-155
AWM20939.1|1758375_1758996_+	hypothetical protein	NA	A0A127AYS1	Bacillus_phage	48.4	1.6e-46
AWM20940.1|1759059_1759827_-	N-acetylmuramoyl-L-alanine amidase	NA	E5DV68	Deep-sea_thermophilic_phage	49.5	9.1e-52
AWM20941.1|1760467_1761436_+	stage V sporulation protein K	NA	G3MAX6	Bacillus_virus	40.5	5.2e-52
AWM20942.1|1761568_1762831_+	GTPase HflX	NA	NA	NA	NA	NA
AWM20943.1|1762848_1764114_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AWM20944.1|1764223_1764631_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AWM20945.1|1764689_1766024_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AWM20946.1|1766136_1767291_-|integrase	site-specific integrase	integrase	A0A0M5M609	Bacillus_phage	39.7	1.1e-64
AWM23191.1|1767601_1768783_+	XRE family transcriptional regulator	NA	Q2I8D6	Bacillus_phage	27.0	1.2e-13
AWM20947.2|1769174_1769588_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AWM20948.1|1769766_1769967_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AWM20949.1|1770008_1770338_+	hypothetical protein	NA	NA	NA	NA	NA
AYA42980.1|1770339_1770558_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20952.2|1770550_1771426_+	replication protein	NA	V9QKF6	Oenococcus_phage	43.7	3.9e-51
AYA42981.1|1771425_1771749_+	hypothetical protein	NA	NA	NA	NA	NA
AYA42982.1|1771726_1772104_-	DUF2513 domain-containing protein	NA	A0A2I7SCV0	Paenibacillus_phage	45.6	2.8e-22
AWM20953.2|1772218_1773049_+	ATP-binding protein	NA	A0A0U3U1U1	Bacillus_phage	35.1	2.4e-34
AWM20954.2|1773363_1773912_+	hypothetical protein	NA	A0A0K2CYJ0	Paenibacillus_phage	39.3	2.0e-05
AWM20955.2|1774019_1774160_+	BH0509 family protein	NA	NA	NA	NA	NA
AWM20956.2|1774406_1774604_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20957.2|1774646_1774973_+	VWA domain-containing protein	NA	NA	NA	NA	NA
AWM20958.2|1774969_1775218_+	hypothetical protein	NA	NA	NA	NA	NA
AYA42983.1|1775229_1775523_+	hypothetical protein	NA	A0A1P8CWZ8	Bacillus_phage	78.0	2.6e-07
AYA42984.1|1775613_1776927_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20961.2|1777165_1777615_+	ArpU family transcriptional regulator	NA	S6AVV9	Thermus_phage	55.9	5.2e-39
AWM20962.2|1777614_1778157_+|integrase	site-specific integrase	integrase	D2XR58	Bacillus_phage	63.3	2.9e-60
AYA42985.1|1778390_1779122_+	hypothetical protein	NA	NA	NA	NA	NA
AYA42986.1|1779297_1780206_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
AYA42987.1|1780517_1781291_-	DUF4393 domain-containing protein	NA	A0A1S5S9V3	Streptococcus_phage	35.6	2.6e-38
AYA42988.1|1781650_1782001_+	hypothetical protein	NA	NA	NA	NA	NA
AYA42989.1|1782215_1782710_+	hypothetical protein	NA	NA	NA	NA	NA
AYA42990.1|1782841_1783027_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20969.2|1783016_1783382_+	HNH endonuclease	NA	A0A1U7Q1S7	Geobacillus_virus	54.2	2.1e-30
AWM20970.2|1783609_1784125_+|terminase	phage terminase small subunit P27 family	terminase	A6M947	Geobacillus_virus	43.4	2.2e-33
AYA42991.1|1784121_1785831_+|terminase	terminase large subunit	terminase	A0A0S2GLF0	Bacillus_phage	62.4	3.2e-206
AYA42992.1|1786019_1787300_+|portal	phage portal protein	portal	D6R3Y6	Bacillus_phage	64.0	9.6e-155
AWM20971.1|1787262_1787889_+|head,protease	HK97 family phage prohead protease	head,protease	Q9ZXF7	Bacillus_phage	75.8	2.9e-80
AYA42993.1|1787927_1789223_+|capsid	phage major capsid protein	capsid	A0A0A7RTL2	Clostridium_phage	48.1	8.9e-92
AWM20972.1|1789244_1789697_+	collagen-like protein	NA	D6R3Z0	Bacillus_phage	57.7	4.6e-11
AWM20973.1|1789714_1790017_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0S2GLH6	Bacillus_phage	46.3	3.6e-12
AWM20974.1|1790006_1790321_+|head,tail	head-tail adaptor protein	head,tail	A0A2H4JCB1	uncultured_Caudovirales_phage	36.3	2.2e-12
AWM20975.1|1790320_1790719_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20976.1|1790715_1791108_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
AWM20977.1|1791122_1791734_+|tail	phage tail protein	tail	J7KKC8	Streptococcus_phage	35.9	2.1e-11
AWM20978.1|1791799_1792177_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20979.1|1792376_1796864_+|tail	phage tail tape measure protein	tail	A6M961	Geobacillus_virus	41.5	1.5e-66
AWM20980.1|1796857_1797697_+|tail	phage tail family protein	tail	D6R3Z9	Bacillus_phage	57.6	1.9e-90
AWM20981.1|1797711_1799415_+	alkaline phosphatase	NA	D6R400	Bacillus_phage	55.5	1.6e-178
AWM20982.1|1799464_1801363_+	teichoic acid biosynthesis protein	NA	A0A185AMX0	Staphylococcus_phage	32.8	1.6e-41
AWM20983.1|1801378_1801687_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20984.1|1801869_1803453_+|plate	phage baseplate upper protein	plate	A0A1P8CWR7	Bacillus_phage	48.0	6.2e-63
AWM20985.1|1803466_1803835_+	hypothetical protein	NA	Q9ZXE0	Bacillus_phage	47.6	3.5e-17
AWM20986.1|1803834_1804008_+	XkdX family protein	NA	Q9ZXD9	Bacillus_phage	75.4	2.5e-18
AWM23192.1|1804157_1804409_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20987.1|1804474_1804897_+|holin	holin	holin	D6R405	Bacillus_phage	82.7	2.4e-54
AWM20988.1|1804940_1805918_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A218KC88	Bacillus_phage	68.7	7.0e-65
AWM20989.1|1805958_1806258_-	hypothetical protein	NA	NA	NA	NA	NA
AWM20990.1|1806264_1808112_-	hypothetical protein	NA	A0A1P8CWI7	Bacillus_phage	55.9	1.3e-120
AWM20991.1|1808360_1808540_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20992.1|1809207_1809498_+	hypothetical protein	NA	NA	NA	NA	NA
AWM20993.1|1809736_1810225_+	hypothetical protein	NA	NA	NA	NA	NA
AYA42994.1|1811257_1813822_+	collagen-like protein	NA	A0A1M7XUF7	Cedratvirus	34.4	9.6e-05
AWM20994.1|1813925_1814597_-	glycosyltransferase	NA	NA	NA	NA	NA
AWM20995.1|1814593_1815301_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AWM20996.1|1815287_1816394_-	glycosyltransferase	NA	NA	NA	NA	NA
AWM23193.1|1816390_1817767_-	glycosyltransferase	NA	NA	NA	NA	NA
AWM20997.2|1818539_1818785_-	hypothetical protein	NA	NA	NA	NA	NA
AWM20998.1|1818978_1819515_+	N-acetyltransferase	NA	NA	NA	NA	NA
AYA42995.1|1819593_1820496_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AWM20999.1|1820572_1820953_+	hypothetical protein	NA	NA	NA	NA	NA
AWM21000.1|1821487_1821718_+	XRE family transcriptional regulator	NA	A0A1P8CWU2	Bacillus_phage	82.4	2.0e-23
AYA42996.1|1821714_1822353_+	DUF3885 domain-containing protein	NA	NA	NA	NA	NA
AWM21001.2|1822621_1822786_+	hypothetical protein	NA	NA	NA	NA	NA
AWM21002.1|1822915_1823386_+	hypothetical protein	NA	NA	NA	NA	NA
AWM21003.2|1823450_1823654_+	hypothetical protein	NA	NA	NA	NA	NA
AWM21004.1|1823913_1824444_+	N-acetyltransferase	NA	A0A1P8CWJ6	Bacillus_phage	82.9	2.5e-77
AYA42997.1|1825446_1826838_+	MFS transporter	NA	NA	NA	NA	NA
AWM21005.1|1826868_1828470_+	glycoside hydrolase family 43 protein	NA	NA	NA	NA	NA
AWM21006.1|1828606_1829761_-	ROK family protein	NA	NA	NA	NA	NA
AWM21007.1|1830002_1831340_+	xylose isomerase	NA	NA	NA	NA	NA
AWM21008.1|1831490_1832990_+	xylulokinase	NA	NA	NA	NA	NA
AWM21009.1|1833474_1834110_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	68.5	1.7e-72
AWM21010.1|1834523_1835939_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
AWM21011.1|1836040_1837225_-	alanine racemase	NA	NA	NA	NA	NA
AWM21012.1|1837687_1838149_+	DUF2691 family protein	NA	NA	NA	NA	NA
AWM21013.1|1838178_1838613_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	A0A1P8CX51	Bacillus_phage	93.0	2.0e-72
AWM21014.1|1839213_1839474_-	hypothetical protein	NA	NA	NA	NA	NA
1838685:1838704	attR	ATATTATGTATAAAATGAAT	NA	NA	NA	NA
AWM21015.1|1840316_1841156_+	thymidylate synthase	NA	A0A1P8CX42	Bacillus_phage	97.5	8.2e-163
AWM21016.1|1841278_1841491_-	hypothetical protein	NA	NA	NA	NA	NA
AWM21017.1|1841608_1842358_-	hypothetical protein	NA	NA	NA	NA	NA
AWM21018.1|1842470_1842845_-	hypothetical protein	NA	NA	NA	NA	NA
AWM21019.1|1843090_1843315_-|coat	spore coat protein C	coat	NA	NA	NA	NA
>prophage 5
CP029461	Bacillus subtilis strain QB61 chromosome, complete genome	4120380	1992796	2002405	4120380		Bacillus_phage(75.0%)	15	NA	NA
AWM21114.1|1992796_1995397_-	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	34.5	5.6e-45
AWM21115.1|1995854_1996496_-	endo-1,4-beta-xylanase A	NA	NA	NA	NA	NA
AWM21116.1|1996831_1997026_+	hypothetical protein	NA	O64196	Bacillus_phage	52.8	1.1e-06
AWM21117.1|1997128_1997368_-	NINE protein	NA	M4ZS56	Bacillus_phage	65.8	1.2e-18
AWM21118.1|1997538_1997877_+	XRE family transcriptional regulator	NA	A0A0P0IZG9	Lactobacillus_phage	31.7	5.5e-09
AWM23199.1|1997910_1998267_-	hypothetical protein	NA	NA	NA	NA	NA
AWM21119.1|1998368_1998653_-	hypothetical protein	NA	NA	NA	NA	NA
AWM21120.2|1998686_1999016_-	HIT domain-containing protein	NA	NA	NA	NA	NA
AWM21121.1|1999494_1999806_-	hypothetical protein	NA	NA	NA	NA	NA
AWM21122.1|1999961_2000174_-	hypothetical protein	NA	O64089	Bacillus_phage	77.5	6.0e-22
AWM21123.1|2000177_2000429_-	hypothetical protein	NA	A0A1P8CWV6	Bacillus_phage	97.6	4.6e-37
AWM23200.1|2000494_2000674_+	hypothetical protein	NA	A0A1P8CWV7	Bacillus_phage	89.3	6.0e-23
AWM21124.1|2000694_2001612_-	hypothetical protein	NA	NA	NA	NA	NA
AWM21125.1|2001772_2002003_+	hypothetical protein	NA	NA	NA	NA	NA
AWM21126.1|2002012_2002405_-	UPF0715 family protein	NA	O64087	Bacillus_phage	84.5	1.0e-51
>prophage 6
CP029461	Bacillus subtilis strain QB61 chromosome, complete genome	4120380	2227283	2233379	4120380		Staphylococcus_phage(66.67%)	8	NA	NA
AWM21364.1|2227283_2227877_-	segregation/condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	35.4	2.0e-14
AWM23212.1|2227866_2228622_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.8	9.4e-09
AWM21365.1|2228902_2229427_+	DUF309 domain-containing protein	NA	NA	NA	NA	NA
AWM21366.1|2229440_2229815_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AWM21367.1|2229927_2230392_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	60.0	5.5e-44
AWM21368.1|2230424_2231621_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	54.9	6.9e-115
AWM21369.1|2231635_2232283_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	45.9	8.5e-43
AWM21370.1|2232293_2233379_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase	NA	A0A2H4PQS8	Staphylococcus_phage	36.1	5.1e-56
>prophage 7
CP029461	Bacillus subtilis strain QB61 chromosome, complete genome	4120380	3624101	3647615	4120380	protease,bacteriocin,tRNA	Staphylococcus_phage(66.67%)	27	NA	NA
AYA43079.1|3624101_3625772_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AWM22657.1|3625768_3626197_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
AWM22658.1|3626509_3626641_+|bacteriocin	subtilosin A family bacteriocin	bacteriocin	NA	NA	NA	NA
AWM22659.1|3626597_3626750_+|bacteriocin	bacteriocin biosynthesis protein	bacteriocin	NA	NA	NA	NA
AWM22660.1|3626774_3628121_+	subtilosin maturase AlbA	NA	NA	NA	NA	NA
AWM22661.1|3628133_3628295_+|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbB	bacteriocin	NA	NA	NA	NA
AWM22662.1|3628291_3629011_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.2	7.3e-19
AWM22663.1|3629003_3630314_+|bacteriocin	bacteriocin biosynthesis protein AlbD	bacteriocin	NA	NA	NA	NA
AWM23272.1|3630303_3631464_+	insulinase family protein	NA	NA	NA	NA	NA
AWM22664.1|3631468_3632749_+	insulinase family protein	NA	NA	NA	NA	NA
AWM22665.1|3632745_3633447_+|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	bacteriocin	NA	NA	NA	NA
AWM22666.1|3633452_3634829_-	YncE family protein	NA	NA	NA	NA	NA
AWM22667.1|3634868_3636224_-	YncE family protein	NA	NA	NA	NA	NA
AWM22668.1|3636220_3636451_-	hypothetical protein	NA	NA	NA	NA	NA
AWM22669.1|3636453_3637599_+	tetratricopeptide repeat protein	NA	A0A1P8CWN8	Bacillus_phage	43.0	5.0e-78
AWM22670.1|3637582_3637702_+	phosphatase	NA	NA	NA	NA	NA
AWM22671.1|3637954_3638434_+	hypothetical protein	NA	NA	NA	NA	NA
AWM22672.1|3638582_3639371_+	hypothetical protein	NA	NA	NA	NA	NA
AWM22673.1|3639357_3640032_+	hypothetical protein	NA	NA	NA	NA	NA
AWM22674.1|3640032_3640839_+	hypothetical protein	NA	NA	NA	NA	NA
AWM22675.1|3640841_3641489_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	40.0	7.7e-28
AWM22676.1|3641481_3642042_+	hypothetical protein	NA	NA	NA	NA	NA
AWM22677.1|3642090_3642963_-	agmatinase	NA	NA	NA	NA	NA
AWM22678.1|3643023_3643854_-	polyamine aminopropyltransferase	NA	NA	NA	NA	NA
AWM22679.1|3644055_3646131_+	penicillin-binding protein	NA	NA	NA	NA	NA
AWM22680.1|3646423_3646942_-	hypothetical protein	NA	NA	NA	NA	NA
AWM22681.1|3646955_3647615_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
>prophage 8
CP029461	Bacillus subtilis strain QB61 chromosome, complete genome	4120380	3677217	3726053	4120380	coat,holin	Enterobacteria_phage(25.0%)	51	NA	NA
AWM22708.1|3677217_3677673_-|coat	spore coat protein	coat	NA	NA	NA	NA
AWM22709.1|3677665_3678517_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	38.9	3.7e-38
AWM22710.1|3678530_3679478_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	43.8	9.8e-72
AWM22711.1|3679477_3680218_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	42.0	7.7e-48
AWM22712.1|3680242_3681262_-|coat	spore coat protein	coat	NA	NA	NA	NA
AWM22713.1|3681264_3681987_-|coat	spore coat protein	coat	NA	NA	NA	NA
AWM22714.1|3681979_3683101_-|coat	spore coat biosynthesis protein SpsE	coat	NA	NA	NA	NA
AWM22715.1|3683100_3683970_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AYA43080.1|3683970_3685140_-	DegT/DnrJ/EryC1/StrS aminotransferase family protein	NA	A0A1D8KU11	Synechococcus_phage	26.6	5.5e-16
AWM22716.1|3685160_3686585_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
AWM22717.1|3686589_3687360_-	glycosyltransferase family 2 protein	NA	A0A0F7L2F7	uncultured_marine_virus	28.6	3.4e-06
AWM22718.1|3687352_3687532_-	hypothetical protein	NA	NA	NA	NA	NA
AWM22719.1|3687679_3688225_+|coat	spore coat protein GerQ	coat	NA	NA	NA	NA
AWM22720.1|3688268_3688640_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AWM22721.1|3688701_3690024_-	purine permease	NA	NA	NA	NA	NA
AWM22722.1|3690043_3690400_-	hypothetical protein	NA	NA	NA	NA	NA
AWM22723.1|3690528_3691899_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AWM22724.1|3691923_3692601_-	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	45.7	1.8e-48
AWM22725.1|3692613_3693420_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AWM22726.1|3693610_3694426_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
AWM22727.1|3694516_3694765_-	hypothetical protein	NA	NA	NA	NA	NA
AWM22728.1|3694858_3696298_-	sucrose-6-phosphate hydrolase	NA	F8WPR5	Bacillus_phage	26.4	3.1e-21
AWM22729.1|3696294_3697680_-	PTS sucrose transporter subunit IIBC	NA	NA	NA	NA	NA
AWM22730.1|3697981_3698752_+	transporter	NA	NA	NA	NA	NA
AWM22731.1|3698790_3699621_-	transcription antiterminator	NA	NA	NA	NA	NA
AWM23274.1|3699660_3699963_-	hypothetical protein	NA	NA	NA	NA	NA
AWM22732.1|3700492_3702913_+	peptidase S8	NA	A0A217EQY2	Bacillus_phage	38.2	5.3e-21
AWM22733.1|3702950_3703952_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
AWM22734.1|3704125_3704875_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
AWM22735.1|3704981_3706163_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
AWM22736.1|3706659_3706923_+	spore morphogenesis/germination protein YwcE	NA	NA	NA	NA	NA
AWM22737.1|3706964_3707339_-	quinol oxidase subunit 4	NA	NA	NA	NA	NA
AWM22738.1|3707340_3707955_-	Quinol oxidase subunit 3	NA	NA	NA	NA	NA
AWM22739.1|3707968_3709918_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AWM23275.1|3709945_3710911_-	cytochrome aa3 quinol oxidase subunit II	NA	NA	NA	NA	NA
AWM23276.1|3711426_3711672_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AWM22740.1|3711742_3713284_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
AWM22741.1|3713287_3714460_-	galactokinase	NA	NA	NA	NA	NA
AWM22742.1|3714542_3714926_-	GtrA family protein	NA	NA	NA	NA	NA
AWM22743.1|3714943_3715615_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AWM22744.1|3715969_3716128_+	DNA-binding anti-repressor SinI	NA	NA	NA	NA	NA
AWM22745.1|3716570_3716879_+	DUF485 domain-containing protein	NA	NA	NA	NA	NA
AWM22746.1|3716875_3718417_+	cation acetate symporter	NA	NA	NA	NA	NA
AWM22747.1|3718447_3719050_-	DsbA family protein	NA	NA	NA	NA	NA
AWM22748.1|3719139_3720390_-	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA	NA
AWM22749.1|3720408_3721566_-	Efem/EfeO family lipoprotein	NA	NA	NA	NA	NA
AWM22750.1|3721562_3723008_-	iron transporter	NA	NA	NA	NA	NA
AWM22751.1|3723164_3723833_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
AWM22752.1|3723829_3724648_-	hydroxyethylthiazole kinase	NA	NA	NA	NA	NA
AWM22753.1|3724655_3725561_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AWM22754.1|3725666_3726053_+|holin	holin-like protein CidA	holin	NA	NA	NA	NA
>prophage 9
CP029461	Bacillus subtilis strain QB61 chromosome, complete genome	4120380	3991218	3997770	4120380		Streptococcus_phage(50.0%)	9	NA	NA
AWM23001.1|3991218_3992277_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	41.2	1.7e-64
AWM23002.1|3992269_3993721_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	50.3	6.6e-120
AWM23003.1|3993756_3994137_-	DUF961 domain-containing protein	NA	A0A1S5SF38	Streptococcus_phage	37.0	4.9e-06
AWM23004.1|3994504_3994765_-	hypothetical protein	NA	NA	NA	NA	NA
AWM23005.1|3994817_3995078_-	hypothetical protein	NA	NA	NA	NA	NA
AWM23006.1|3995074_3995254_-	ICEBs1 excisionase	NA	Q8SBM7	Clostridium_phage	51.9	5.4e-08
AWM23007.1|3995550_3995934_+	XRE family transcriptional regulator	NA	A0A2P1JU09	Anoxybacillus_phage	44.4	1.6e-20
AWM23008.1|3995930_3996461_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
AWM23009.1|3996573_3997770_-	tetratricopeptide repeat protein	NA	A0A1P8CWN8	Bacillus_phage	31.4	2.1e-47
