assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003144175.1_ASM314417v1	CP029398	Streptococcus suis strain HN105 chromosome, complete genome	1	437729-437852	1	CRISPRCasFinder	no	csa3	cas3,csa3,DinG,RT,WYL,DEDDh	Type I-A	GGAATGAAAAAAAGTTTCAAAAAAGTGTTGACAA	34	1	3	437763-437818|437763-437818|437763-437818	CP029398.1_16690-16745|CP029398.1_84725-84780|CP029398.1_353075-353130	NA	1	1	Orphan	cas3,csa3,DinG,RT,WYL,DEDDh	NA,NA|145aa|down_1|CP029398.1_448022_448457_-	NA|232aa|up_9|CP029398.1_429161_429857_+	COG4758, COG4758, Predicted membrane protein [Function unknown]	NA|339aa|up_8|CP029398.1_429853_430870_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|214aa|up_7|CP029398.1_430841_431483_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|467aa|up_6|CP029398.1_431532_432933_+	cd07517, HAD_HPP, phosphatase, similar to Bacteroides thetaiotaomicron VPI-5482 BT4131 hexose phosphate phosphatase; belongs to the haloacid dehalogenase-like superfamily	NA|124aa|up_5|CP029398.1_432934_433306_+	PRK07252, PRK07252, S1 RNA-binding domain-containing protein	NA|309aa|up_4|CP029398.1_433331_434258_-	TIGR01136, Cysteine_synthase, cysteine synthase	NA|213aa|up_3|CP029398.1_434347_434986_-	COG1739, COG1739, Uncharacterized conserved protein [Function unknown]	NA|431aa|up_2|CP029398.1_435036_436329_+	COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]	NA|222aa|up_1|CP029398.1_436321_436987_+	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|181aa|up_0|CP029398.1_437063_437606_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|488aa|down_0|CP029398.1_446330_447794_-	COG3666, COG3666, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|145aa|down_1|CP029398.1_448022_448457_-	NA	NA|709aa|down_2|CP029398.1_448679_450806_-	cd07552, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to Archaeoglobus fulgidus CopB, a Cu(2+)-ATPase	NA|481aa|down_3|CP029398.1_450971_452414_-	PRK10965, PRK10965, multicopper oxidase; Provisional	NA|150aa|down_4|CP029398.1_452431_452881_-	TIGR02698, Uncharacterized_16	csa3|113aa|down_5|CP029398.1_453345_453684_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|209aa|down_6|CP029398.1_453695_454322_-	pfam03596, Cad, Cadmium resistance transporter	NA|544aa|down_7|CP029398.1_457285_458917_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|259aa|down_8|CP029398.1_458954_459731_+	PRK14135, recX, recombination regulator RecX; Provisional	NA|178aa|down_9|CP029398.1_459806_460340_+	PRK13662, PRK13662, hypothetical protein; Provisional
GCA_003144175.1_ASM314417v1	CP029398	Streptococcus suis strain HN105 chromosome, complete genome	3	1067339-1067420	2	CRISPRCasFinder	no		cas3,csa3,DinG,RT,WYL,DEDDh	Orphan	AGCTTGTAGGGCGTGTTCAATTCC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,RT,WYL,DEDDh	NA|250aa|up_8|CP029398.1_1059814_1060564_-,NA|58aa|down_1|CP029398.1_1068237_1068411_-,NA|67aa|down_5|CP029398.1_1072143_1072344_-,NA|58aa|down_9|CP029398.1_1074733_1074907_-	NA|118aa|up_9|CP029398.1_1059439_1059793_-	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p	NA|250aa|up_8|CP029398.1_1059814_1060564_-	NA	NA|253aa|up_7|CP029398.1_1060580_1061339_-	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|200aa|up_6|CP029398.1_1061451_1062051_-	pfam13702, Lysozyme_like, Lysozyme-like	NA|325aa|up_5|CP029398.1_1062051_1063026_-	pfam04245, NA37, 37-kD nucleoid-associated bacterial protein	NA|420aa|up_4|CP029398.1_1063025_1064285_-	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|144aa|up_3|CP029398.1_1064308_1064740_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|201aa|up_2|CP029398.1_1064736_1065339_-	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|278aa|up_1|CP029398.1_1065331_1066165_-	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional	NA|360aa|up_0|CP029398.1_1066164_1067244_-	PRK00591, prfA, peptide chain release factor 1; Validated	NA|194aa|down_0|CP029398.1_1067639_1068221_-	PRK04296, PRK04296, thymidine kinase; Provisional	NA|58aa|down_1|CP029398.1_1068237_1068411_-	NA	NA|436aa|down_2|CP029398.1_1068605_1069913_-	smart00894, Excalibur, Excalibur calcium-binding domain	NA|61aa|down_3|CP029398.1_1070047_1070230_+	PRK02289, PRK02289, 4-oxalocrotonate tautomerase; Provisional	NA|611aa|down_4|CP029398.1_1070279_1072112_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|67aa|down_5|CP029398.1_1072143_1072344_-	NA	NA|138aa|down_6|CP029398.1_1072408_1072822_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|196aa|down_7|CP029398.1_1072844_1073432_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|409aa|down_8|CP029398.1_1073485_1074712_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|58aa|down_9|CP029398.1_1074733_1074907_-	NA
GCA_003144175.1_ASM314417v1	CP029398	Streptococcus suis strain HN105 chromosome, complete genome	4	1519102-1519262	3	CRISPRCasFinder	no		cas3,csa3,DinG,RT,WYL,DEDDh	Orphan	GGTTTTCAAATGGTCACTTTCACATTTCTAGGTGACCTGCTGAAACAGTCTATTC	55	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,RT,WYL,DEDDh	NA|73aa|up_7|CP029398.1_1511853_1512072_-,NA	NA|150aa|up_9|CP029398.1_1510818_1511268_-	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|70aa|up_8|CP029398.1_1511305_1511515_-	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|73aa|up_7|CP029398.1_1511853_1512072_-	NA	NA|156aa|up_6|CP029398.1_1512350_1512818_-	PRK05422, smpB, SsrA-binding protein SmpB	NA|790aa|up_5|CP029398.1_1512820_1515190_-	TIGR02063, Ribonuclease_R, ribonuclease R	NA|78aa|up_4|CP029398.1_1515562_1515796_-	COG1314, SecG, Preprotein translocase subunit SecG [Intracellular trafficking and secretion]	NA|50aa|up_3|CP029398.1_1515842_1515992_-	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|402aa|up_2|CP029398.1_1515991_1517197_-	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|201aa|up_1|CP029398.1_1517183_1517786_-	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|276aa|up_0|CP029398.1_1517778_1518606_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|300aa|down_0|CP029398.1_1519290_1520190_-	PRK00089, era, GTPase Era; Reviewed	NA|134aa|down_1|CP029398.1_1520206_1520608_-	cd14265, UDPK_IM_like, Integral membrane undecaprenol kinase and similar enzymes	NA|166aa|down_2|CP029398.1_1520588_1521086_-	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|271aa|down_3|CP029398.1_1521185_1521998_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|503aa|down_4|CP029398.1_1522101_1523610_-	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component	NA|234aa|down_5|CP029398.1_1523637_1524339_-	PRK01130, PRK01130, putative N-acetylmannosamine-6-phosphate 2-epimerase	NA|186aa|down_6|CP029398.1_1524737_1525295_-	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|232aa|down_7|CP029398.1_1525460_1526156_-	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|580aa|down_8|CP029398.1_1526209_1527949_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|576aa|down_9|CP029398.1_1527948_1529676_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
