assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003112245.1_ASM311224v1	CP028117	Escherichia coli O111 str. RM9322 chromosome, complete genome	1	3274834-3275106	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14i	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	4,4,4	4	TypeI-E	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14i	NA,NA	NA|254aa|up_9|CP028117.1_3266646_3267408_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|CP028117.1_3267388_3268438_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|CP028117.1_3268434_3268914_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|CP028117.1_3268913_3269624_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|CP028117.1_3269642_3269954_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|CP028117.1_3270147_3270471_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|CP028117.1_3270520_3271126_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|CP028117.1_3271125_3272553_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|CP028117.1_3272554_3273463_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|CP028117.1_3273714_3274752_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|CP028117.1_3275202_3275496_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|CP028117.1_3275495_3276416_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|CP028117.1_3276412_3277063_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|CP028117.1_3277044_3277791_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|CP028117.1_3277801_3278857_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|180aa|down_5|CP028117.1_3278868_3279408_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|down_6|CP028117.1_3279404_3280967_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|209aa|down_7|CP028117.1_3281064_3281691_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas3|691aa|down_8|CP028117.1_3281692_3283765_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_9|CP028117.1_3283958_3284111_-	pfam01848, HOK_GEF, Hok/gef family
GCA_003112245.1_ASM311224v1	CP028117	Escherichia coli O111 str. RM9322 chromosome, complete genome	2	3300809-3301203	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14i	Unclear	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAAC,CGGTTTATCCCCGCTGGCGCGGGGAAC	29,27,27	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Unclear	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14i	NA,NA|47aa|down_1|CP028117.1_3302352_3302493_+	NA|424aa|up_9|CP028117.1_3289453_3290725_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|CP028117.1_3290715_3290976_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|CP028117.1_3290992_3291568_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|CP028117.1_3291715_3292576_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|CP028117.1_3292572_3293352_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|CP028117.1_3293329_3294667_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|CP028117.1_3294760_3296215_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|CP028117.1_3296284_3297070_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|CP028117.1_3297388_3298666_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|CP028117.1_3298691_3300170_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|CP028117.1_3301542_3302214_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|CP028117.1_3302352_3302493_+	NA	NA|291aa|down_2|CP028117.1_3302506_3303379_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_3|CP028117.1_3303438_3304737_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_4|CP028117.1_3304824_3306462_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_5|CP028117.1_3306689_3307481_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_6|CP028117.1_3307551_3307887_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_7|CP028117.1_3307886_3308135_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_8|CP028117.1_3308212_3310447_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|919aa|down_9|CP028117.1_3311851_3314608_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional
