The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP028894	Vibrio cholerae strain A1552 chromosome 1, complete sequence	3015094	275451	284069	3015094	integrase,tRNA	Shigella_phage(28.57%)	8	276531:276543	283178:283190
AWB73060.1|275451_275760_+	hypothetical protein	NA	Q716C1	Shigella_phage	74.2	1.3e-30
AWB73061.1|275759_276629_+	hypothetical protein	NA	Q716C2	Shigella_phage	65.6	2.8e-113
276531:276543	attL	AGCCAGCTCAGGC	NA	NA	NA	NA
AWB73062.1|276664_277906_-|integrase	Prophage integrase IntA	integrase	A0A1V0E8G8	Vibrio_phage	47.3	9.1e-110
AWB73063.1|278291_280169_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	32.9	1.5e-34
AWB73064.1|280267_282031_-	DNA primase	NA	A0A1S5RG58	Helicobacter_phage	30.7	1.1e-44
AWB73065.1|282120_282564_-	hypothetical protein	NA	A0A292GL36	Xanthomonas_phage	49.3	3.7e-29
AWB73066.1|282593_282809_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AWB73067.1|283049_284069_+|tRNA	tRNA N6-adenosine threonylcarbamoyltransferase	tRNA	A0A0R6PI74	Moraxella_phage	57.4	2.6e-107
283178:283190	attR	GCCTGAGCTGGCT	NA	NA	NA	NA
>prophage 2
CP028894	Vibrio cholerae strain A1552 chromosome 1, complete sequence	3015094	290238	297456	3015094		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
AWB73077.1|290238_290991_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.3	8.0e-69
AWB73078.1|290983_291610_+	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	2.0e-36
AWB73079.1|291609_292539_+	Murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	34.7	7.7e-05
AWB73080.1|292612_293620_+	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.2	6.0e-35
AWB73081.1|293712_296298_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.0	2.2e-33
AWB73082.1|296568_297456_-	Cysteine synthase B	NA	A0A1X9I5K7	Streptococcus_phage	41.1	4.1e-56
>prophage 3
CP028894	Vibrio cholerae strain A1552 chromosome 1, complete sequence	3015094	529079	536272	3015094		Faustovirus(16.67%)	9	NA	NA
AWB73273.1|529079_530294_+	Cysteine desulfurase IscS	NA	A0A0H3TPH2	Faustovirus	30.5	1.1e-32
AWB73274.1|530330_530714_+	Iron-sulfur cluster assembly scaffold protein IscU	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
AWB73275.1|530774_531098_+	Iron-binding protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	50.5	3.0e-25
AWB73276.1|531146_531662_+	Co-chaperone protein HscB	NA	NA	NA	NA	NA
AWB73277.1|531685_533536_+	Chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.1	5.3e-106
AWB73278.1|533549_533888_+	2Fe-2S ferredoxin	NA	NA	NA	NA	NA
AWB73279.1|533936_534131_+	hypothetical protein	NA	NA	NA	NA	NA
AWB73280.1|534350_535640_+	Peptidase B	NA	Q6GYZ8	Mycoplasma_phage	34.3	1.7e-34
AWB73281.1|535843_536272_+	Nucleoside diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	38.4	1.0e-20
>prophage 4
CP028894	Vibrio cholerae strain A1552 chromosome 1, complete sequence	3015094	1275278	1307896	3015094		Vibrio_phage(47.37%)	26	NA	NA
AWB73925.1|1275278_1277387_-	Leukotoxin export ATP-binding protein LtxB	NA	W8CYL7	Bacillus_phage	27.1	4.9e-39
AWB73926.1|1277810_1278158_+	hypothetical protein	NA	NA	NA	NA	NA
AWB73927.1|1278249_1278645_+	Leukotoxin-activating lysine-acyltransferase LtxC	NA	NA	NA	NA	NA
AWB73928.1|1278668_1292306_+	Multifunctional-autoprocessing repeats-in-toxin	NA	B3Y8K3	Vibrio_virus	100.0	8.4e-07
AWB73929.1|1292673_1292898_-	hypothetical protein	NA	U5TMI6	Satellite_phage	100.0	1.1e-34
AWB73930.1|1292991_1293363_-	hypothetical protein	NA	U5TMH5	Satellite_phage	100.0	3.3e-68
AWB73931.1|1293343_1294423_-	hypothetical protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
AWB73932.1|1294548_1294887_+	hypothetical protein	NA	U5TNA1	Satellite_phage	100.0	7.3e-54
AWB73933.1|1295499_1295874_-	Cholera enterotoxin subunit B	NA	Q77DH7	Vibrio_virus	100.0	7.8e-65
AWB73934.1|1295870_1296647_-	Cholera enterotoxin subunit A	NA	A0A142I6Y0	Vibrio_phage	100.0	1.3e-151
AWB73935.1|1296745_1297945_-	Zona occludens toxin	NA	A0A142I6Z1	Vibrio_phage	100.0	5.3e-240
AWB73936.1|1297941_1298226_-	hypothetical protein	NA	A0A0F6YNQ7	Vibrio_phage	100.0	4.0e-45
AWB73937.1|1298231_1299419_-	hypothetical protein	NA	A0A142I701	Vibrio_phage	100.0	1.4e-200
AWB73938.1|1299525_1299774_-	hypothetical protein	NA	A0A0N7F140	Vibrio_phage	100.0	8.8e-33
AWB73939.1|1299766_1299910_-	hypothetical protein	NA	NA	NA	NA	NA
AWB73940.1|1299909_1300287_-	hypothetical protein	NA	A0A0N9HJ67	Vibrio_phage	100.0	3.1e-69
AWB73941.1|1300267_1301347_-	hypothetical protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
AWB73942.1|1301472_1301811_+	hypothetical protein	NA	U5TNA1	Satellite_phage	100.0	7.3e-54
AWB73943.1|1302300_1302885_-	hypothetical protein	NA	E3U9I9	Vibrio_phage	100.0	6.4e-114
AWB73944.1|1302877_1303045_-	hypothetical protein	NA	E3U9J0	Vibrio_phage	100.0	2.3e-13
AWB73945.1|1303122_1303815_-	hypothetical protein	NA	NA	NA	NA	NA
AWB73946.1|1303944_1304229_-	hypothetical protein	NA	NA	NA	NA	NA
AWB73947.1|1304233_1305802_-	hypothetical protein	NA	A7BJY2	Enterobacteria_phage	32.3	2.7e-58
AWB73948.1|1305978_1306530_+	hypothetical protein	NA	NA	NA	NA	NA
AWB73949.1|1307568_1307736_-	hypothetical protein	NA	NA	NA	NA	NA
AWB73950.1|1307728_1307896_-	hypothetical protein	NA	E3U9J0	Vibrio_phage	100.0	2.3e-13
>prophage 5
CP028894	Vibrio cholerae strain A1552 chromosome 1, complete sequence	3015094	1353078	1361895	3015094		Vibrio_phage(33.33%)	11	NA	NA
AWB73993.1|1353078_1354269_-	hypothetical protein	NA	M4MA06	Vibrio_phage	33.3	1.3e-36
AWB73994.1|1354367_1355216_-	hypothetical protein	NA	Q6JIM8	Burkholderia_virus	39.1	7.0e-29
AWB73995.1|1355178_1356504_-	hypothetical protein	NA	M4MHV5	Vibrio_phage	38.9	1.2e-75
AWB73996.1|1356513_1358274_-	hypothetical protein	NA	A0A0K1LKI4	Staphylococcus_phage	35.9	1.1e-81
AWB73997.1|1358282_1358465_-	hypothetical protein	NA	NA	NA	NA	NA
AWB73998.1|1358464_1358680_-	hypothetical protein	NA	NA	NA	NA	NA
AWB73999.1|1358707_1359388_-	hypothetical protein	NA	NA	NA	NA	NA
AWB74000.1|1359384_1359990_-	hypothetical protein	NA	NA	NA	NA	NA
AWB74001.1|1359970_1360477_-	hypothetical protein	NA	K7PHI2	Enterobacteria_phage	27.1	1.1e-05
AWB74002.1|1360851_1361040_-	hypothetical protein	NA	NA	NA	NA	NA
AWB74003.1|1361250_1361895_+	hypothetical protein	NA	G0YPX7	Erwinia_phage	33.5	1.1e-10
>prophage 6
CP028894	Vibrio cholerae strain A1552 chromosome 1, complete sequence	3015094	1366550	1374277	3015094		Diadromus_pulchellus_ascovirus(14.29%)	10	NA	NA
AWB74012.1|1366550_1367138_-	Thymidylate kinase	NA	F2NYY4	Diadromus_pulchellus_ascovirus	33.1	2.1e-08
AWB74013.1|1367157_1367427_-	hypothetical protein	NA	NA	NA	NA	NA
AWB74014.1|1367631_1368225_-	Deoxyadenosine/deoxycytidine kinase	NA	A0A249Y6S3	Cherax_quadricarinatus_iridovirus	30.0	3.7e-08
AWB74015.1|1368235_1368358_-	hypothetical protein	NA	NA	NA	NA	NA
AWB74016.1|1368357_1368615_-	hypothetical protein	NA	NA	NA	NA	NA
AWB74017.1|1368611_1369109_-	hypothetical protein	NA	A0A142K9B6	Gordonia_phage	51.9	6.8e-08
AWB74018.1|1369078_1369939_-	Flap endonuclease Xni	NA	F1D0G7	Vibrio_phage	43.0	3.1e-56
AWB74019.1|1370132_1370564_-	hypothetical protein	NA	Q1MVI3	Enterobacteria_phage	47.9	2.1e-29
AWB74020.1|1370588_1372643_-	DNA polymerase I	NA	A0A0F7DD46	Delftia_phage	40.8	7.1e-144
AWB74021.1|1372642_1374277_-	DNA primase	NA	L7TLT7	Rhizobium_phage	49.0	1.6e-122
>prophage 7
CP028894	Vibrio cholerae strain A1552 chromosome 1, complete sequence	3015094	1711892	1718792	3015094		Vibrio_phage(71.43%)	13	NA	NA
AWB74303.1|1711892_1712069_-	hypothetical protein	NA	A0A1V0E8E5	Vibrio_phage	51.9	2.8e-09
AWB74304.1|1712212_1712689_+	hypothetical protein	NA	NA	NA	NA	NA
AWB74305.1|1712685_1712823_+	hypothetical protein	NA	NA	NA	NA	NA
AWB74306.1|1712918_1713485_-	hypothetical protein	NA	M4MHE6	Vibrio_phage	31.4	7.5e-11
AWB74307.1|1713610_1714237_-	hypothetical protein	NA	Q716C2	Shigella_phage	72.9	1.1e-92
AWB74308.1|1714479_1714788_-	hypothetical protein	NA	Q716C1	Shigella_phage	76.3	7.1e-32
AWB74309.1|1714830_1715871_-	hypothetical protein	NA	A0A2I7S9D9	Vibrio_phage	72.5	2.6e-126
AWB74310.1|1716005_1716365_-	hypothetical protein	NA	A0A2I7S9E0	Vibrio_phage	67.8	3.7e-40
AWB74311.1|1716413_1716785_-	hypothetical protein	NA	NA	NA	NA	NA
AWB74312.1|1716845_1717424_-	hypothetical protein	NA	NA	NA	NA	NA
AWB74313.1|1717442_1717763_-	hypothetical protein	NA	NA	NA	NA	NA
AWB74314.1|1717749_1718124_-	hypothetical protein	NA	NA	NA	NA	NA
AWB74315.1|1718525_1718792_-	hypothetical protein	NA	M1Q554	Vibrio_phage	33.8	1.4e-07
>prophage 8
CP028894	Vibrio cholerae strain A1552 chromosome 1, complete sequence	3015094	2198888	2205505	3015094		Staphylococcus_phage(66.67%)	7	NA	NA
AWB74753.1|2198888_2199359_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	6.8e-34
AWB74754.1|2199623_2200733_-	Riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	39.8	6.7e-64
AWB74755.1|2200773_2201427_-	Riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.2	1.2e-31
AWB74756.1|2201431_2202535_-	Riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.1	1.3e-43
AWB74757.1|2202560_2203010_-	Transcriptional repressor NrdR	NA	NA	NA	NA	NA
AWB74758.1|2203109_2204360_-	Gamma-glutamyl phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	49.5	5.0e-100
AWB74759.1|2204371_2205505_-	Glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.4e-64
