The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029074	Mycobacterium abscessus strain G153 chromosome, complete genome	4886609	192479	201978	4886609		Shahe_endorna-like_virus(25.0%)	9	NA	NA
AWG52943.1|192479_193346_-	glucose-1-phosphate thymidylyltransferase	NA	H9NC64	Sphingomonas_phage	57.5	2.8e-89
AWG52944.1|193489_193669_+	hypothetical protein	NA	NA	NA	NA	NA
AWG52945.1|193748_195071_+	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	39.2	1.7e-05
AWG57073.1|195234_196296_+	NAD-dependent dehydratase	NA	A0A0E3IB24	Synechococcus_phage	25.8	1.6e-17
AWG52946.1|196463_197597_+	acyltransferase	NA	A9YX16	Burkholderia_phage	26.4	1.2e-15
AWG57074.1|197829_198522_+	class I SAM-dependent methyltransferase	NA	Q98VI8	Paramecium_bursaria_Chlorella_virus	30.2	3.7e-12
AWG52947.1|198732_199539_+	macrocin O-methyltransferase	NA	A0A2R8FDY2	Brazilian_cedratvirus	52.6	4.9e-56
AWG52948.1|199588_200857_+	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	40.3	3.3e-06
AWG57075.1|200853_201978_+	acyltransferase	NA	A9YX16	Burkholderia_phage	29.0	7.1e-21
>prophage 2
CP029074	Mycobacterium abscessus strain G153 chromosome, complete genome	4886609	1458656	1467217	4886609		uncultured_Mediterranean_phage(16.67%)	7	NA	NA
AWG54083.1|1458656_1459931_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	28.6	1.5e-22
AWG54084.1|1459930_1461607_+	hypothetical protein	NA	NA	NA	NA	NA
AWG54085.1|1461603_1462137_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	36.4	1.4e-14
AWG54086.1|1462167_1464534_+	RelA/SpoT family protein	NA	A0A291L9W9	Bordetella_phage	38.4	1.8e-13
AWG54087.1|1464637_1465507_-	class A beta-lactamase	NA	A0A1B0VBP7	Salmonella_phage	46.0	1.3e-54
AWG54088.1|1465508_1466432_-	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	31.6	1.1e-08
AWG54089.1|1466545_1467217_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	31.1	4.9e-17
>prophage 3
CP029074	Mycobacterium abscessus strain G153 chromosome, complete genome	4886609	3133687	3176342	4886609	portal,tail,head,protease,transposase,capsid,integrase,terminase	Mycobacterium_phage(76.47%)	58	3130909:3130923	3153936:3153950
3130909:3130923	attL	GTCCTTGATGACGAA	NA	NA	NA	NA
AWG55524.1|3133687_3134947_+|integrase	site-specific integrase	integrase	A0A2D1G9S9	Mycobacterium_phage	69.7	6.3e-175
AWG55525.1|3135039_3135366_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55526.1|3135404_3135752_-	DUF2746 domain-containing protein	NA	NA	NA	NA	NA
AWG55527.1|3135814_3136057_-	hypothetical protein	NA	A0A222ZLP9	Mycobacterium_phage	40.3	7.4e-08
AWG55528.1|3136469_3136697_+	hypothetical protein	NA	NA	NA	NA	NA
AWG55529.1|3136679_3136904_-	hypothetical protein	NA	NA	NA	NA	NA
AWG57386.1|3136929_3138126_-	hypothetical protein	NA	S5W0N6	Mycobacterium_phage	56.2	2.1e-119
AWG55530.1|3138389_3139304_-	hypothetical protein	NA	A0A2P1CCW0	Mycobacterium_phage	44.4	6.1e-55
AWG55531.1|3139354_3139789_-	hypothetical protein	NA	NA	NA	NA	NA
AWG57387.1|3139791_3141189_-	chitinase	NA	A0A142F1U1	Mycobacterium_phage	49.3	2.4e-114
AWG55532.1|3141449_3141887_-	hypothetical protein	NA	A0A2P1JR64	Mycobacterium_phage	73.9	4.2e-54
AWG55533.1|3141902_3143123_-	hypothetical protein	NA	G3MDN1	Mycobacterium_phage	41.9	1.6e-26
AWG55534.1|3143125_3143524_-	hypothetical protein	NA	A0A0U1UNR7	Pseudomonas_phage	49.6	7.3e-29
AWG55535.1|3143535_3147639_-	hypothetical protein	NA	A0A0K1LLJ4	Mycobacterium_phage	44.6	8.0e-179
AWG55536.1|3147635_3148472_-	hypothetical protein	NA	H6WSC0	Mycobacterium_phage	61.9	4.3e-95
AWG55537.1|3148526_3150230_-	hypothetical protein	NA	S5YA01	Mycobacterium_phage	80.8	8.2e-279
AWG55538.1|3150273_3151998_-	hypothetical protein	NA	A0A142K810	Mycobacterium_phage	65.0	1.4e-230
AWG55539.1|3151997_3156047_-|tail	phage tail tape measure protein	tail	A0A0K1LLI9	Mycobacterium_phage	59.4	1.0e-130
3153936:3153950	attR	GTCCTTGATGACGAA	NA	NA	NA	NA
AWG57388.1|3156059_3156251_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55540.1|3156402_3156906_-	hypothetical protein	NA	A0A2D1GAT8	Mycobacterium_phage	39.0	1.3e-19
AWG55541.1|3156986_3158081_-	hypothetical protein	NA	A0A2P1JR54	Mycobacterium_phage	55.0	2.7e-73
AWG55542.1|3158162_3158576_-	hypothetical protein	NA	Q854Y7	Mycobacterium_virus	53.3	1.2e-34
AWG55543.1|3158572_3158938_-	HK97 gp10 family phage protein	NA	A0A2P1JR51	Mycobacterium_phage	46.2	3.0e-21
AWG55544.1|3158937_3159276_-	hypothetical protein	NA	A0A0A7RVI5	Mycobacterium_phage	52.0	9.9e-27
AWG55545.1|3159272_3159830_-	hypothetical protein	NA	A0A0A7RVK3	Mycobacterium_phage	65.9	6.8e-65
AWG55546.1|3159830_3160244_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55547.1|3160240_3160471_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55548.1|3160467_3160974_-	aspartyl beta-hydroxylase	NA	NA	NA	NA	NA
AWG55549.1|3160981_3162412_-|capsid	phage major capsid protein	capsid	A0A1B3B249	Gordonia_phage	49.0	3.5e-113
AWG55550.1|3162414_3163341_-|head,protease	HK97 family phage prohead protease	head,protease	A0A1B3AYS9	Gordonia_phage	46.5	1.2e-53
AWG55551.1|3163337_3164798_-|portal	phage portal protein	portal	A0A1B3AZW5	Gordonia_phage	64.3	6.4e-171
AWG55552.1|3164952_3166410_-|terminase	terminase	terminase	G9FH27	Rhodococcus_phage	53.7	3.5e-129
AWG57389.1|3166444_3166801_-	hypothetical protein	NA	G9FH26	Rhodococcus_phage	58.3	1.8e-23
AWG55553.1|3166913_3167189_-	hypothetical protein	NA	A0A2P1JRH4	Mycobacterium_phage	66.7	1.7e-29
AWG55554.1|3167188_3167437_-	MFS transporter	NA	A0A2H4PFU6	Mycobacterium_phage	43.4	1.1e-11
AWG55555.1|3167424_3167724_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55556.1|3167716_3168121_-	hypothetical protein	NA	M4W6B5	Mycobacterium_phage	57.9	2.2e-28
AWG55557.1|3168127_3168316_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55558.1|3168972_3169248_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55559.1|3169240_3169549_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55560.1|3169587_3169932_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55561.1|3169969_3170299_-	hypothetical protein	NA	A0A088FQ47	Mycobacterium_phage	44.4	1.1e-14
AWG55562.1|3170295_3170595_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55563.1|3170587_3170806_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55564.1|3171093_3171546_-	hypothetical protein	NA	A0A2P1JZV1	Mycobacterium_phage	47.8	4.4e-06
AWG55565.1|3171542_3171821_-|transposase	transposase	transposase	A0A088FQJ6	Mycobacterium_phage	50.0	6.5e-16
AWG55566.1|3171892_3172093_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55567.1|3172118_3172802_-	hypothetical protein	NA	A0A2L0HK00	Mycobacterium_phage	45.8	3.2e-48
AWG55568.1|3172777_3172972_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55569.1|3172968_3173259_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55570.1|3173506_3173701_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55571.1|3173697_3173877_-	hypothetical protein	NA	NA	NA	NA	NA
AWG57390.1|3173943_3174249_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55572.1|3174379_3174577_-	hypothetical protein	NA	NA	NA	NA	NA
AWG55573.1|3174615_3174930_-	WhiB family transcriptional regulator	NA	A0A1B0XUI6	Freshwater_phage	51.4	2.4e-14
AWG57391.1|3174929_3175178_-	WhiB family transcriptional regulator	NA	A0A097EWF7	Mycobacterium_phage	50.0	3.2e-14
AWG55574.1|3175579_3175795_-	hypothetical protein	NA	NA	NA	NA	NA
AWG57392.1|3175787_3176342_-	hypothetical protein	NA	A0A0K1LTX7	Mycobacterium_phage	37.9	1.2e-08
>prophage 4
CP029074	Mycobacterium abscessus strain G153 chromosome, complete genome	4886609	3185925	3192666	4886609		Mycobacterium_phage(85.71%)	10	NA	NA
AWG55593.1|3185925_3186117_-	hypothetical protein	NA	A0A2D1GAF3	Mycobacterium_phage	66.7	7.8e-13
AWG55594.1|3186113_3186911_-	hypothetical protein	NA	A0A0K1LRE4	Mycobacterium_phage	89.1	2.2e-141
AWG55595.1|3186903_3187764_-	hypothetical protein	NA	A0A0K1LSM7	Mycobacterium_phage	55.4	1.3e-70
AWG55596.1|3187760_3188093_-	hypothetical protein	NA	NA	NA	NA	NA
AWG57394.1|3188089_3188407_-	XRE family transcriptional regulator	NA	A0A2D1GA98	Mycobacterium_phage	58.9	2.4e-22
AWG57396.1|3188620_3189058_+	hypothetical protein	NA	A0A2D1GA16	Mycobacterium_phage	57.1	2.2e-34
AWG57395.1|3189044_3189776_-	hypothetical protein	NA	A0A068F4L5	Mycobacterium_phage	54.0	3.5e-61
AWG55597.1|3190088_3190835_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AWG55598.1|3190776_3191379_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AWG55599.1|3191643_3192666_+	acyltransferase	NA	A9YX16	Burkholderia_phage	29.1	2.5e-25
>prophage 5
CP029074	Mycobacterium abscessus strain G153 chromosome, complete genome	4886609	3854532	3888909	4886609	integrase,transposase	Gordonia_phage(50.0%)	29	3883870:3883885	3892699:3892714
AWG56180.1|3854532_3855000_-|transposase	transposase	transposase	NA	NA	NA	NA
AWG56181.1|3854996_3857228_-|transposase	transposase	transposase	NA	NA	NA	NA
AWG56182.1|3857214_3858516_-|transposase	transposase	transposase	NA	NA	NA	NA
AWG56183.1|3858442_3859684_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0U4JD08	Gordonia_phage	33.8	2.8e-10
AWG56184.1|3859736_3860456_-	hypothetical protein	NA	NA	NA	NA	NA
AWG56185.1|3860658_3860880_+	hypothetical protein	NA	NA	NA	NA	NA
AWG56186.1|3861080_3861299_-	hypothetical protein	NA	NA	NA	NA	NA
AWG56187.1|3861432_3862212_+	hypothetical protein	NA	NA	NA	NA	NA
AWG56188.1|3862346_3862628_+	DUF3892 domain-containing protein	NA	NA	NA	NA	NA
AWG56189.1|3862768_3863455_-	hypothetical protein	NA	NA	NA	NA	NA
AWG56190.1|3863517_3863775_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AWG56191.1|3863912_3865355_+	hypothetical protein	NA	NA	NA	NA	NA
AWG57466.1|3865704_3866205_-	type II/IV secretion system family protein	NA	NA	NA	NA	NA
AWG56192.1|3866514_3866940_-	hypothetical protein	NA	NA	NA	NA	NA
AWG56193.1|3867369_3867738_-	hypothetical protein	NA	NA	NA	NA	NA
AWG57467.1|3867986_3868334_-	DUF4279 domain-containing protein	NA	NA	NA	NA	NA
AWG56194.1|3868386_3869574_-	hypothetical protein	NA	NA	NA	NA	NA
AWG56195.1|3869970_3871575_-	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AWG56196.1|3871728_3872079_-	hypothetical protein	NA	G8I4H6	Mycobacterium_phage	40.2	7.1e-12
AWG56197.1|3872652_3873306_-	amidohydrolase	NA	NA	NA	NA	NA
AWG56198.1|3873866_3875672_-	AAA family ATPase	NA	NA	NA	NA	NA
AWG56199.1|3876042_3877725_-	hypothetical protein	NA	NA	NA	NA	NA
AWG56200.1|3878172_3878862_-	hypothetical protein	NA	NA	NA	NA	NA
AWG56201.1|3878923_3879181_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AWG57468.1|3879217_3882616_-	type III restriction endonuclease subunit R	NA	NA	NA	NA	NA
AWG56202.1|3882764_3883163_-	hypothetical protein	NA	NA	NA	NA	NA
AWG56203.1|3883149_3885636_-|integrase	integrase	integrase	NA	NA	NA	NA
3883870:3883885	attL	GCCGGTGGCCGCCAAA	NA	NA	NA	NA
AWG56204.1|3885632_3887555_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
AWG56205.1|3887520_3888909_-|integrase	integrase	integrase	NA	NA	NA	NA
3892699:3892714	attR	GCCGGTGGCCGCCAAA	NA	NA	NA	NA
