The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029072	Mycobacterium abscessus strain G220 chromosome, complete genome	4800506	498422	506794	4800506		Mycobacterium_phage(33.33%)	8	NA	NA
AWG71509.1|498422_499892_+	serine hydrolase	NA	A0A1J0GRK9	Mycobacterium_phage	28.5	9.4e-13
AWG67713.1|500019_500832_+	DUF1906 domain-containing protein	NA	A0A2D1GEF2	Gordonia_phage	49.1	3.1e-50
AWG67714.1|500880_502077_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JL93	Lactococcus_phage	47.3	2.6e-05
AWG67715.1|502506_503355_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2D1GEV9	Mycobacterium_phage	56.1	2.9e-67
AWG67716.1|503521_503824_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AWG67717.1|504115_504565_+	hypothetical protein	NA	NA	NA	NA	NA
AWG67718.1|504585_506037_+	sensor histidine kinase	NA	Q8QKV4	Ectocarpus_siliculosus_virus	33.6	2.9e-06
AWG67719.1|506116_506794_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	31.4	4.4e-26
>prophage 2
CP029072	Mycobacterium abscessus strain G220 chromosome, complete genome	4800506	994285	1039876	4800506	holin,capsid,integrase,protease	Staphylococcus_phage(33.33%)	39	992653:992669	1026962:1026978
992653:992669	attL	TGAGCTCATCGAGCGCA	NA	NA	NA	NA
AWG68145.1|994285_995551_+|protease	serine protease	protease	NA	NA	NA	NA
AWG68146.1|995524_996487_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AWG68147.1|996519_997041_-|holin	phage holin family protein	holin	NA	NA	NA	NA
AWG68148.1|997290_997986_+	peptidase	NA	NA	NA	NA	NA
AWG68149.1|998075_1000052_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	37.3	7.7e-79
AWG68150.1|1000235_1001855_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AWG68151.1|1001851_1002823_+	ABC transporter permease	NA	NA	NA	NA	NA
AWG68152.1|1002815_1003730_+	ABC transporter permease	NA	NA	NA	NA	NA
AWG68153.1|1003730_1005380_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.8	1.2e-21
AWG68154.1|1005404_1006148_+	oxidoreductase	NA	NA	NA	NA	NA
AWG68155.1|1006563_1007445_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AWG68156.1|1007623_1007872_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68157.1|1007828_1008902_+	helicase	NA	NA	NA	NA	NA
AWG68158.1|1009535_1010924_+|integrase	integrase	integrase	NA	NA	NA	NA
AWG68159.1|1010889_1012812_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
AWG68160.1|1012808_1015295_+|integrase	integrase	integrase	NA	NA	NA	NA
AWG68161.1|1015281_1015680_+	hypothetical protein	NA	NA	NA	NA	NA
AWG71556.1|1015828_1019227_+	type III restriction endonuclease subunit R	NA	NA	NA	NA	NA
AWG68162.1|1019263_1019521_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AWG68163.1|1019582_1020272_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68164.1|1020719_1022402_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68165.1|1022772_1024578_+	AAA family ATPase	NA	NA	NA	NA	NA
AWG68166.1|1025138_1025792_+	amidohydrolase	NA	NA	NA	NA	NA
AWG68167.1|1026365_1026716_+	hypothetical protein	NA	G8I4H6	Mycobacterium_phage	40.2	7.1e-12
AWG68168.1|1026869_1028474_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
1026962:1026978	attR	TGAGCTCATCGAGCGCA	NA	NA	NA	NA
AWG68169.1|1028870_1030058_+	hypothetical protein	NA	NA	NA	NA	NA
AWG71557.1|1030110_1030458_+	DUF4279 domain-containing protein	NA	NA	NA	NA	NA
AWG68170.1|1030706_1031075_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68171.1|1031504_1031930_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68172.1|1032820_1033597_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68173.1|1033593_1034178_+	pilus assembly protein TadC	NA	NA	NA	NA	NA
AWG68174.1|1034516_1034753_+	hypothetical protein	NA	NA	NA	NA	NA
AWG71558.1|1035010_1035262_+	hypothetical protein	NA	NA	NA	NA	NA
AWG71559.1|1035870_1036173_+	hypothetical protein	NA	NA	NA	NA	NA
AWG71560.1|1036628_1037033_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68175.1|1037229_1037994_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AWG68176.1|1038062_1038302_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68177.1|1038490_1038931_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68178.1|1039045_1039876_+|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
>prophage 3
CP029072	Mycobacterium abscessus strain G220 chromosome, complete genome	4800506	1684387	1691128	4800506		Mycobacterium_phage(85.71%)	10	NA	NA
AWG68738.1|1684387_1685410_-	acyltransferase	NA	A9YX16	Burkholderia_phage	29.1	2.5e-25
AWG68739.1|1685674_1686277_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AWG68740.1|1686218_1686965_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AWG71623.1|1687277_1688009_+	hypothetical protein	NA	A0A068F4L5	Mycobacterium_phage	54.0	3.5e-61
AWG71624.1|1687995_1688433_-	hypothetical protein	NA	A0A2D1GA16	Mycobacterium_phage	57.1	2.2e-34
AWG71625.1|1688646_1688964_+	XRE family transcriptional regulator	NA	A0A2D1GA98	Mycobacterium_phage	58.9	2.4e-22
AWG68741.1|1688960_1689293_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68742.1|1689289_1690150_+	hypothetical protein	NA	A0A0K1LSM7	Mycobacterium_phage	55.4	1.3e-70
AWG68743.1|1690142_1690940_+	hypothetical protein	NA	A0A0K1LRE4	Mycobacterium_phage	89.1	2.2e-141
AWG68744.1|1690936_1691128_+	hypothetical protein	NA	A0A2D1GAF3	Mycobacterium_phage	66.7	7.8e-13
>prophage 4
CP029072	Mycobacterium abscessus strain G220 chromosome, complete genome	4800506	1700711	1741239	4800506	protease,portal,capsid,tail,head,transposase,terminase	Mycobacterium_phage(75.76%)	54	NA	NA
AWG71627.1|1700711_1701266_+	hypothetical protein	NA	A0A0K1LTX7	Mycobacterium_phage	37.9	1.2e-08
AWG68763.1|1701258_1701474_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68764.1|1701875_1702124_+	WhiB family transcriptional regulator	NA	A0A097EWF7	Mycobacterium_phage	50.0	3.2e-14
AWG68765.1|1702123_1702438_+	WhiB family transcriptional regulator	NA	A0A1B0XUI6	Freshwater_phage	51.4	2.4e-14
AWG68766.1|1702476_1702674_+	hypothetical protein	NA	NA	NA	NA	NA
AWG71628.1|1702804_1703110_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68767.1|1703352_1703547_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68768.1|1703794_1704085_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68769.1|1704081_1704276_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68770.1|1704251_1704935_+	hypothetical protein	NA	A0A2L0HK00	Mycobacterium_phage	45.8	3.2e-48
AWG68771.1|1704960_1705161_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68772.1|1705232_1705511_+|transposase	transposase	transposase	A0A088FQJ6	Mycobacterium_phage	50.0	6.5e-16
AWG68773.1|1705507_1705960_+	hypothetical protein	NA	A0A2P1JZV1	Mycobacterium_phage	47.8	4.4e-06
AWG68774.1|1706247_1706466_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68775.1|1706458_1706758_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68776.1|1706754_1707084_+	hypothetical protein	NA	A0A088FQ47	Mycobacterium_phage	44.4	1.1e-14
AWG68777.1|1707121_1707466_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68778.1|1707504_1707813_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68779.1|1707805_1708081_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68780.1|1708737_1708926_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68781.1|1708932_1709337_+	hypothetical protein	NA	M4W6B5	Mycobacterium_phage	57.9	2.2e-28
AWG68782.1|1709329_1709629_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68783.1|1709616_1709865_+	MFS transporter	NA	A0A2H4PFU6	Mycobacterium_phage	43.4	1.1e-11
AWG68784.1|1709864_1710140_+	hypothetical protein	NA	A0A2P1JRH4	Mycobacterium_phage	66.7	1.7e-29
AWG68785.1|1710252_1710609_+	hypothetical protein	NA	G9FH26	Rhodococcus_phage	58.3	1.8e-23
AWG68786.1|1710643_1712101_+|terminase	terminase	terminase	G9FH27	Rhodococcus_phage	53.7	3.5e-129
AWG68787.1|1712255_1713716_+|portal	phage portal protein	portal	A0A1B3AZW5	Gordonia_phage	64.3	6.4e-171
AWG68788.1|1713712_1714639_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1B3AYS9	Gordonia_phage	46.5	1.2e-53
AWG68789.1|1714641_1716072_+|capsid	phage major capsid protein	capsid	A0A1B3B249	Gordonia_phage	49.0	3.5e-113
AWG68790.1|1716079_1716586_+	aspartyl beta-hydroxylase	NA	NA	NA	NA	NA
AWG68791.1|1716582_1716813_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68792.1|1716809_1717223_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68793.1|1717223_1717781_+	hypothetical protein	NA	A0A0A7RVK3	Mycobacterium_phage	65.9	6.8e-65
AWG68794.1|1717777_1718116_+	hypothetical protein	NA	A0A0A7RVI5	Mycobacterium_phage	52.0	9.9e-27
AWG68795.1|1718115_1718481_+	HK97 gp10 family phage protein	NA	A0A2P1JR51	Mycobacterium_phage	46.2	3.0e-21
AWG68796.1|1718477_1718891_+	hypothetical protein	NA	Q854Y7	Mycobacterium_virus	53.3	1.2e-34
AWG68797.1|1718972_1720067_+	hypothetical protein	NA	A0A2P1JR54	Mycobacterium_phage	55.0	2.7e-73
AWG68798.1|1720147_1720651_+	hypothetical protein	NA	A0A2D1GAT8	Mycobacterium_phage	39.0	1.3e-19
AWG71629.1|1720802_1720994_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68799.1|1721006_1725056_+|tail	phage tail tape measure protein	tail	A0A0K1LLI9	Mycobacterium_phage	59.4	1.0e-130
AWG68800.1|1725055_1726780_+	hypothetical protein	NA	A0A142K810	Mycobacterium_phage	65.0	1.4e-230
AWG68801.1|1726823_1728527_+	hypothetical protein	NA	S5YA01	Mycobacterium_phage	80.8	8.2e-279
AWG68802.1|1728581_1729418_+	hypothetical protein	NA	H6WSC0	Mycobacterium_phage	61.9	4.3e-95
AWG68803.1|1729414_1733518_+	hypothetical protein	NA	A0A0K1LLJ4	Mycobacterium_phage	44.6	8.0e-179
AWG68804.1|1733529_1733928_+	hypothetical protein	NA	A0A0U1UNR7	Pseudomonas_phage	49.6	7.3e-29
AWG68805.1|1733930_1735151_+	hypothetical protein	NA	G3MDN1	Mycobacterium_phage	41.9	1.6e-26
AWG68806.1|1735166_1735604_+	hypothetical protein	NA	A0A2P1JR64	Mycobacterium_phage	73.9	4.2e-54
AWG68807.1|1735864_1737262_+	chitinase	NA	A0A142F1U1	Mycobacterium_phage	49.3	2.4e-114
AWG68808.1|1737264_1737699_+	hypothetical protein	NA	NA	NA	NA	NA
AWG71630.1|1737749_1738664_+	hypothetical protein	NA	A0A2P1CCW0	Mycobacterium_phage	44.4	6.1e-55
AWG71631.1|1738927_1740124_+	hypothetical protein	NA	S5W0N6	Mycobacterium_phage	56.2	2.1e-119
AWG68809.1|1740149_1740374_+	hypothetical protein	NA	NA	NA	NA	NA
AWG68810.1|1740356_1740584_-	hypothetical protein	NA	NA	NA	NA	NA
AWG68811.1|1740996_1741239_+	hypothetical protein	NA	A0A222ZLP9	Mycobacterium_phage	40.3	7.4e-08
>prophage 5
CP029072	Mycobacterium abscessus strain G220 chromosome, complete genome	4800506	3288882	3297443	4800506		Streptococcus_phage(16.67%)	7	NA	NA
AWG70119.1|3288882_3289554_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	31.1	4.9e-17
AWG70120.1|3289667_3290591_+	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	31.6	1.1e-08
AWG70121.1|3290592_3291462_+	class A beta-lactamase	NA	A0A1B0VBP7	Salmonella_phage	46.0	1.3e-54
AWG70122.1|3291565_3293932_-	RelA/SpoT family protein	NA	A0A291L9W9	Bordetella_phage	38.4	1.8e-13
AWG70123.1|3293962_3294496_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	36.4	1.4e-14
AWG70124.1|3294492_3296169_-	hypothetical protein	NA	NA	NA	NA	NA
AWG70125.1|3296168_3297443_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	28.6	1.5e-22
>prophage 6
CP029072	Mycobacterium abscessus strain G220 chromosome, complete genome	4800506	4598891	4608390	4800506		Burkholderia_phage(25.0%)	9	NA	NA
AWG71939.1|4598891_4600016_-	acyltransferase	NA	A9YX16	Burkholderia_phage	29.0	7.1e-21
AWG71299.1|4600012_4601281_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	40.3	3.3e-06
AWG71300.1|4601330_4602137_-	macrocin O-methyltransferase	NA	A0A2R8FDY2	Brazilian_cedratvirus	52.6	4.9e-56
AWG71940.1|4602347_4603040_-	class I SAM-dependent methyltransferase	NA	Q98VI8	Paramecium_bursaria_Chlorella_virus	30.2	3.7e-12
AWG71301.1|4603272_4604406_-	acyltransferase	NA	A9YX16	Burkholderia_phage	26.4	1.2e-15
AWG71302.1|4604573_4605635_-	NAD-dependent dehydratase	NA	A0A0E3IB24	Synechococcus_phage	25.8	1.6e-17
AWG71303.1|4605798_4607121_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	39.2	1.7e-05
AWG71304.1|4607200_4607380_-	hypothetical protein	NA	NA	NA	NA	NA
AWG71305.1|4607523_4608390_+	glucose-1-phosphate thymidylyltransferase	NA	H9NC64	Sphingomonas_phage	57.5	2.8e-89
