The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP016157	Staphylococcus simulans strain MR2 chromosome, complete genome	2680372	1025875	1036252	2680372		Staphylococcus_phage(50.0%)	12	NA	NA
AWG18277.1|1025875_1026160_+	co-chaperone GroES	NA	A0A221S4A8	uncultured_virus	35.9	1.8e-13
AWG18278.1|1026198_1027818_+	chaperonin GroL	NA	A0A240F779	uncultured_virus	53.0	3.8e-156
AWG18279.1|1027881_1029057_-	recombinase	NA	A0A1W6JPB2	Staphylococcus_phage	66.9	1.0e-150
AWG18280.1|1029066_1029648_-	hypothetical protein	NA	A0A0A8WFJ2	Clostridium_phage	37.1	2.3e-07
AWG18281.1|1029741_1029960_+	hypothetical protein	NA	NA	NA	NA	NA
AWG18282.1|1029963_1030269_+	excisionase	NA	A0A1W6JPE8	Staphylococcus_phage	76.5	1.1e-35
AWG18283.1|1030270_1030474_+	pathogenicity island protein	NA	A0A1W6JQF4	Staphylococcus_phage	68.7	7.5e-22
AWG18284.1|1030476_1030899_+	hypothetical protein	NA	NA	NA	NA	NA
AWG18285.1|1030898_1031198_+	pathogenicity island protein	NA	Q4ZE75	Staphylococcus_phage	50.5	9.4e-21
AWG18286.1|1031300_1033640_+	DNA primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	41.9	6.0e-139
AWG18287.1|1034023_1034290_+	hypothetical protein	NA	H9A0M1	Staphylococcus_phage	42.5	1.8e-07
AWG18288.1|1035685_1036252_+	peptidase U35	NA	Q8SBP9	Clostridium_phage	32.2	5.2e-12
>prophage 2
CP016157	Staphylococcus simulans strain MR2 chromosome, complete genome	2680372	1167127	1202981	2680372	transposase,tRNA	Staphylococcus_phage(89.29%)	36	NA	NA
AWG18406.1|1167127_1169170_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	30.3	1.1e-67
AWG18407.1|1169430_1169943_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18408.1|1170122_1170815_+	hypothetical protein	NA	NA	NA	NA	NA
AWG18409.1|1170930_1172319_+	O-succinylbenzoate-CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	57.3	5.9e-158
AWG18410.1|1172321_1173332_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	53.7	5.5e-97
AWG18411.1|1173322_1173580_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	75.7	4.7e-29
AWG18412.1|1173657_1174149_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	49.7	4.9e-35
AWG18413.1|1174114_1174888_+	dipeptidyl aminopeptidase	NA	A0A2H4PQM6	Staphylococcus_phage	66.5	1.3e-93
AWG18414.1|1174940_1176533_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	81.4	6.8e-259
AWG18415.1|1176920_1178117_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	81.6	3.0e-187
AWG18416.1|1178213_1179113_+	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	75.4	4.0e-99
AWG18417.1|1179234_1180071_+	glyoxal reductase	NA	A0A2H4PQR8	Staphylococcus_phage	63.8	4.2e-103
AWG18418.1|1180122_1180476_-	camphor resistance protein CrcB	NA	NA	NA	NA	NA
AWG18419.1|1180468_1180840_-	camphor resistance protein CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	64.5	6.1e-38
AWG18420.1|1180900_1181209_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18421.1|1181396_1182113_+	transaldolase	NA	M1PR54	Cyanophage	35.0	3.8e-20
AWG18422.1|1182253_1182715_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	40.9	1.4e-18
AWG18423.1|1182689_1183130_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18424.1|1183129_1183627_-	hypothetical protein	NA	A0A2H4PQT5	Staphylococcus_phage	42.5	1.1e-21
AWG18425.1|1183831_1184053_+	hypothetical protein	NA	NA	NA	NA	NA
AWG18426.1|1184226_1185543_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	31.0	1.4e-44
AWG18427.1|1185939_1186785_+	autolysin	NA	A0A1W6JNR1	Staphylococcus_phage	41.7	4.2e-42
AWG18428.1|1186926_1188408_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	64.5	1.0e-14
AWG18429.1|1188802_1189852_+	riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	59.9	4.1e-119
AWG18430.1|1189856_1190489_+	riboflavin synthase subunit alpha	NA	A0A2H4PQS5	Staphylococcus_phage	61.4	2.8e-67
AWG18431.1|1190504_1191686_+	bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	73.5	1.8e-168
AWG18432.1|1191718_1192180_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	75.2	3.9e-58
AWG18433.1|1192253_1193249_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	63.3	5.8e-115
AWG18434.1|1193510_1194341_+	lysophospholipase	NA	NA	NA	NA	NA
AWG18435.1|1194517_1195474_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
AWG18436.1|1195539_1196097_-	rRNA methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	61.6	3.5e-61
AWG18437.1|1196093_1197056_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	83.7	4.3e-67
AWG18438.1|1197328_1198507_+	multidrug MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	73.2	3.0e-163
AWG18439.1|1198886_1201301_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	85.0	0.0e+00
AWG18440.1|1201321_1201639_+	sulfurtransferase	NA	A0A2H4PQR9	Staphylococcus_phage	66.7	1.5e-32
AWG18441.1|1201724_1202981_-	hypothetical protein	NA	A0A2H4PQX1	Staphylococcus_phage	75.0	2.6e-40
>prophage 3
CP016157	Staphylococcus simulans strain MR2 chromosome, complete genome	2680372	1325485	1335559	2680372	tRNA	Klosneuvirus(33.33%)	7	NA	NA
AWG18547.1|1325485_1327759_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.9	4.6e-75
AWG18548.1|1327777_1328296_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	44.4	8.1e-28
AWG18549.1|1328647_1330837_+	GTP pyrophosphokinase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	38.0	9.0e-12
AWG18550.1|1330852_1331305_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
AWG18551.1|1331301_1332177_+	cell wall amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.1	6.8e-11
AWG18552.1|1332502_1333777_+|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L6G5	Tupanvirus	23.8	2.3e-15
AWG18553.1|1333792_1335559_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SIS0	Klosneuvirus	33.7	9.2e-07
>prophage 4
CP016157	Staphylococcus simulans strain MR2 chromosome, complete genome	2680372	1641314	1680350	2680372	portal,integrase,terminase	Staphylococcus_virus(38.64%)	56	1640404:1640426	1680386:1680408
1640404:1640426	attL	ATGATTTTTGCCTTGTGAGAATA	NA	NA	NA	NA
AWG18842.1|1641314_1641872_-	hypothetical protein	NA	A0A0U4JD08	Gordonia_phage	32.2	1.2e-05
AWG19821.1|1642288_1642474_-	XRE family transcriptional regulator	NA	A0A0F6N3H3	Staphylococcus_phage	86.9	1.4e-22
AWG18843.1|1643181_1643724_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18844.1|1644433_1645906_-	hypothetical protein	NA	A0A2H4JAU4	uncultured_Caudovirales_phage	71.8	2.6e-220
AWG18845.1|1645906_1646155_-	PTS mannose transporter subunit IID	NA	Q4ZD59	Staphylococcus_phage	87.8	2.2e-36
AWG18846.1|1646294_1646594_-	hypothetical protein	NA	Q4ZD60	Staphylococcus_phage	80.2	6.3e-33
AWG18847.1|1646650_1646929_-	hypothetical protein	NA	A0A2H4J771	uncultured_Caudovirales_phage	63.2	7.6e-17
AWG18848.1|1646934_1648803_-	hypothetical protein	NA	A0A2H4JCH3	uncultured_Caudovirales_phage	45.8	4.6e-150
AWG18849.1|1648819_1650472_-	hypothetical protein	NA	A0A2P1JUJ3	Bacillus_phage	36.3	4.7e-45
AWG18850.1|1650482_1651412_-	hypothetical protein	NA	A0A2H4J5C4	uncultured_Caudovirales_phage	59.6	4.3e-48
AWG18851.1|1651415_1655189_-	hypothetical protein	NA	H9A0P1	Staphylococcus_phage	65.0	9.8e-115
AWG18852.1|1655211_1655526_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18853.1|1655558_1656017_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18854.1|1656084_1656642_-	hypothetical protein	NA	A0A1W6JQQ8	Staphylococcus_phage	33.5	5.1e-20
AWG18855.1|1656655_1657126_-	hypothetical protein	NA	A0A2H4PQL6	Staphylococcus_phage	31.8	3.5e-14
AWG18856.1|1657140_1657524_-	hypothetical protein	NA	M9NRJ3	Staphylococcus_phage	46.3	4.7e-25
AWG18857.1|1657527_1657851_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18858.1|1657840_1658161_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18859.1|1658357_1659317_-	hypothetical protein	NA	A0A097PAW2	Streptococcus_pyogenes_phage	53.4	1.1e-35
AWG18860.1|1659331_1659901_-	hypothetical protein	NA	I6SB44	Staphylococcus_virus	45.2	5.6e-22
AWG18861.1|1660004_1660991_-	hypothetical protein	NA	Q4ZC73	Staphylococcus_virus	42.0	9.5e-62
AWG18862.1|1660959_1662360_-|portal	phage portal protein	portal	A0A1W6JQP9	Staphylococcus_phage	49.9	1.7e-125
AWG18863.1|1662356_1663628_-|terminase	terminase	terminase	Q4ZCF2	Staphylococcus_virus	93.1	2.4e-230
AWG18864.1|1663627_1664005_-	DNA-binding protein	NA	A0A1W6JP86	Staphylococcus_phage	64.0	6.7e-40
AWG18865.1|1664083_1664629_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18866.1|1664825_1665251_-	transcriptional regulator	NA	A0A1J0MFW0	Staphylococcus_phage	80.9	2.3e-57
AWG18867.1|1665377_1665554_-	transcriptional regulator	NA	Q4ZC79	Staphylococcus_virus	87.9	2.1e-20
AWG18868.1|1665556_1665853_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18869.1|1666397_1666625_-	hypothetical protein	NA	Q4ZC83	Staphylococcus_virus	71.6	3.6e-17
AWG18870.1|1666621_1666882_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18871.1|1667339_1667759_-	hypothetical protein	NA	Q4ZC89	Staphylococcus_virus	60.0	7.7e-21
AWG18872.1|1667759_1668275_-	hypothetical protein	NA	Q4ZC91	Staphylococcus_virus	30.8	3.6e-12
AWG18873.1|1668287_1668479_-	hypothetical protein	NA	Q4ZC92	Staphylococcus_virus	98.4	6.6e-28
AWG18874.1|1668479_1668887_-	Holliday junction resolvase	NA	Q4ZC94	Staphylococcus_virus	91.9	6.9e-67
AWG18875.1|1668870_1669059_-	hypothetical protein	NA	Q4ZC95	Staphylococcus_virus	95.2	7.2e-27
AWG18876.1|1669052_1669826_-	DNA replication protein DnaC	NA	A0A1W6JP70	Staphylococcus_phage	79.2	6.0e-104
AWG18877.1|1669838_1670576_-	replication protein	NA	Q4ZDQ6	Staphylococcus_virus	65.4	9.0e-65
AWG18878.1|1670621_1671104_+	hypothetical protein	NA	A0A2H4JC39	uncultured_Caudovirales_phage	61.9	9.4e-47
AWG18879.1|1671119_1671791_-	hypothetical protein	NA	Q4ZC99	Staphylococcus_virus	86.0	4.7e-113
AWG18880.1|1671803_1672250_-	single-stranded DNA-binding protein	NA	A0A1J0MFD7	Staphylococcus_phage	90.2	3.1e-52
AWG18881.1|1672249_1672921_-	single-stranded DNA-binding protein	NA	A0A1J0MF78	Staphylococcus_phage	89.5	8.4e-110
AWG18882.1|1672883_1673138_-	hypothetical protein	NA	Q4ZCA2	Staphylococcus_virus	96.4	6.1e-37
AWG18883.1|1673130_1673355_-	hypothetical protein	NA	NA	NA	NA	NA
AWG18884.1|1673454_1673670_-	hypothetical protein	NA	Q4ZCA4	Staphylococcus_virus	90.1	3.3e-28
AWG18885.1|1673682_1673985_-	hypothetical protein	NA	Q4ZCA6	Staphylococcus_virus	98.0	6.7e-51
AWG18886.1|1674099_1674423_+	hypothetical protein	NA	NA	NA	NA	NA
AWG18887.1|1674616_1674844_-	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	71.6	2.0e-23
AWG18888.1|1674844_1675618_-	phage antirepressor	NA	Q4ZCB0	Staphylococcus_virus	99.2	1.5e-142
AWG18889.1|1675733_1675970_+	hypothetical protein	NA	Q4ZBN3	Staphylococcus_phage	84.6	6.0e-31
AWG18890.1|1676138_1676378_-	transcriptional regulator	NA	A0A2H4J9X2	uncultured_Caudovirales_phage	94.9	3.9e-38
AWG18891.1|1676570_1676903_+	transcriptional regulator	NA	A0A2H4JC44	uncultured_Caudovirales_phage	94.5	1.0e-47
AWG18892.1|1676916_1677390_+	toxin	NA	A0A2H4J4F2	uncultured_Caudovirales_phage	65.4	1.1e-55
AWG18893.1|1677394_1678018_+	hypothetical protein	NA	NA	NA	NA	NA
AWG18894.1|1678431_1678947_+	hypothetical protein	NA	A0A0H3U494	Staphylococcus_phage	48.0	3.5e-39
AWG18895.1|1678948_1679257_+	hypothetical protein	NA	NA	NA	NA	NA
AWG18896.1|1679321_1680350_+|integrase	integrase	integrase	Q4ZCC1	Staphylococcus_virus	98.8	5.1e-191
1680386:1680408	attR	ATGATTTTTGCCTTGTGAGAATA	NA	NA	NA	NA
>prophage 5
CP016157	Staphylococcus simulans strain MR2 chromosome, complete genome	2680372	1952983	1961405	2680372		Prochlorococcus_phage(33.33%)	9	NA	NA
AWG19145.1|1952983_1953550_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.3	2.6e-32
AWG19146.1|1953546_1954587_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.1	1.6e-70
AWG19147.1|1954591_1956013_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	30.8	5.6e-47
AWG19148.1|1955991_1958181_-	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	39.4	7.4e-139
AWG19149.1|1958173_1958845_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
AWG19150.1|1958844_1959105_-	phosphoribosylformylglycinamidine synthase, purS protein	NA	NA	NA	NA	NA
AWG19151.1|1959104_1959809_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	42.9	1.1e-48
AWG19152.1|1959808_1960936_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AWG19153.1|1960922_1961405_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	4.7e-22
>prophage 6
CP016157	Staphylococcus simulans strain MR2 chromosome, complete genome	2680372	2202464	2236454	2680372	transposase,terminase,capsid,portal,tail,integrase,head	Staphylococcus_phage(27.78%)	35	2194289:2194305	2232047:2232063
2194289:2194305	attL	TACTTTGTCAGCTTCTA	NA	NA	NA	NA
AWG19354.1|2202464_2202773_-|head,tail	phage head-tail adapter protein	head,tail	NA	NA	NA	NA
AWG19355.1|2202952_2204596_-|terminase	terminase	terminase	A0A290GJW3	Caldibacillus_phage	50.8	1.0e-156
AWG19356.1|2204588_2204909_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19357.1|2205043_2205337_-	HNH endonuclease	NA	R9TNN2	Paenibacillus_phage	43.8	7.3e-18
AWG19358.1|2205329_2205611_-	DNA packaging protein	NA	NA	NA	NA	NA
AWG19359.1|2205676_2206909_-|capsid	phage capsid protein	capsid	NA	NA	NA	NA
AWG19360.1|2206910_2207477_-	peptidase U35	NA	Q8SBP9	Clostridium_phage	33.8	2.3e-12
AWG19361.1|2207463_2208672_-|portal	phage portal protein	portal	A0A1L2BY94	Clostridium_phage	35.0	1.2e-58
AWG19362.1|2208869_2209211_-	pathogenicity island protein	NA	A0A1W6JQD5	Staphylococcus_phage	70.5	2.2e-42
AWG19363.1|2209459_2210959_-	virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	73.5	3.0e-216
AWG19364.1|2210955_2211876_-	hypothetical protein	NA	A0A1W6JQL5	Staphylococcus_phage	42.6	3.0e-57
AWG19365.1|2211919_2212195_-	pathogenicity island protein	NA	A0A1W6JPG5	Staphylococcus_phage	51.6	4.0e-18
AWG19366.1|2212194_2212488_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19367.1|2212490_2212694_-	pathogenicity island protein	NA	A0A2H4JD47	uncultured_Caudovirales_phage	74.6	1.1e-20
AWG19368.1|2212710_2212956_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19369.1|2212959_2213178_-	transcriptional regulator	NA	A0A2H4JB11	uncultured_Caudovirales_phage	54.2	2.3e-13
AWG19370.1|2213340_2214042_+	hypothetical protein	NA	A0A2H4JH10	uncultured_Caudovirales_phage	51.7	3.2e-51
AWG19371.1|2214061_2215120_+|integrase	integrase	integrase	A0A1W6JQE7	Staphylococcus_phage	42.7	1.7e-64
AWG19372.1|2215972_2216155_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19373.1|2216668_2217982_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
AWG19374.1|2218237_2219422_+	MFS transporter	NA	NA	NA	NA	NA
AWG19375.1|2219476_2220421_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	5.9e-53
AWG19376.1|2220439_2221438_-	hypothetical protein	NA	A1IMD5	Streptococcus_phage	41.8	3.4e-51
AWG19377.1|2221424_2222348_-	RNase adaptor protein RapZ	NA	A0A0R8VB27	Thermobifida_phage	30.3	8.8e-09
AWG19378.1|2222513_2223470_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.5	7.3e-83
AWG19379.1|2223576_2225016_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19380.1|2225036_2225519_-	acetyltransferase	NA	NA	NA	NA	NA
AWG19381.1|2225530_2226358_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
AWG19382.1|2226363_2227296_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AWG19383.1|2227484_2230334_-	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	56.9	6.3e-311
AWG19384.1|2230344_2232327_-	excinuclease ABC subunit B	NA	NA	NA	NA	NA
2232047:2232063	attR	TAGAAGCTGACAAAGTA	NA	NA	NA	NA
AWG19385.1|2232656_2232899_-	protein CsbA	NA	NA	NA	NA	NA
AWG19386.1|2232905_2233547_-	hydrolase	NA	NA	NA	NA	NA
AWG19387.1|2233875_2234811_-	LysM family protein	NA	NA	NA	NA	NA
AWG19388.1|2235137_2236454_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	31.0	1.4e-44
>prophage 7
CP016157	Staphylococcus simulans strain MR2 chromosome, complete genome	2680372	2259505	2271985	2680372		uncultured_Caudovirales_phage(50.0%)	10	NA	NA
AWG19844.1|2259505_2260474_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.4	7.8e-133
AWG19409.1|2260779_2261754_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	90.7	2.1e-170
AWG19410.1|2261866_2263972_-	ribonucleotide-diphosphate reductase	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	88.2	0.0e+00
AWG19411.1|2263934_2264336_-	protein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	65.4	1.8e-43
AWG19412.1|2265220_2266108_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19413.1|2266110_2266614_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	70.1	6.6e-51
AWG19414.1|2266796_2268320_+	peptide transporter	NA	A0A0P0IY73	Acinetobacter_phage	37.7	7.1e-72
AWG19415.1|2268614_2270117_+	peptide ABC transporter permease	NA	A0A0P0IY73	Acinetobacter_phage	34.3	3.0e-67
AWG19416.1|2270242_2270779_-	5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AWG19417.1|2270920_2271985_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.2	2.2e-19
>prophage 1
CP016158	Staphylococcus simulans strain MR2 plasmid unnamed1, complete sequence	146543	40696	80232	146543	integrase	Staphylococcus_phage(63.64%)	39	77073:77132	80233:80293
AWG19908.1|40696_41371_-|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	98.2	7.6e-127
AWG19909.1|41822_42716_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19910.1|43924_44164_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19911.1|44285_44573_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19912.1|46152_47094_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19913.1|48681_48915_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19914.1|50843_50975_+	hemolysin activation protein	NA	NA	NA	NA	NA
AWG19915.1|51652_52093_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19916.1|52089_52548_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19917.1|52736_53411_+|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	96.9	1.6e-124
AWG19918.1|53624_54458_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19919.1|54846_55296_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19920.1|55298_55652_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19921.1|55699_55897_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19922.1|55981_56179_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19923.1|56246_56921_+|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	97.3	2.4e-125
AWG19924.1|57356_57656_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19925.1|57658_57955_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19926.1|58092_58278_-	transcriptional regulator	NA	NA	NA	NA	NA
AWG19927.1|58282_58621_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19928.1|61156_61843_+	hypothetical protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	32.2	2.6e-10
AWG19929.1|61855_62764_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	41.6	1.1e-43
AWG19930.1|62764_63517_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19931.1|63513_64251_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19932.1|66240_66576_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19933.1|66767_67073_-	hypothetical protein	NA	NA	NA	NA	NA
AWG20012.1|67720_68446_-	replication protein	NA	NA	NA	NA	NA
AWG19934.1|69332_69626_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19935.1|69632_70259_+	hypothetical protein	NA	NA	NA	NA	NA
AWG20013.1|70320_70584_+	type II secretion protein	NA	A0A1X9I6T6	Streptococcus_phage	42.9	1.1e-09
AWG19936.1|72966_73173_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19937.1|73269_73476_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19938.1|73539_73818_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19939.1|74155_74356_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	61.9	2.5e-17
AWG19940.1|74486_75161_+|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	95.1	3.9e-123
AWG19941.1|75305_76250_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19942.1|76397_77072_+|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	96.9	7.1e-125
77073:77132	attL	CACAAAGTATTATTTTAAAATTGAGCTCAGACATTTATTTTTCAACTTTGCAACAGAACC	NA	NA	NA	NA
AWG19943.1|78231_78717_-	lincosamide nucleotidyltransferase Lnu(A)	NA	A0A2K5B286	Erysipelothrix_phage	31.2	2.8e-14
AWG19944.1|79557_80232_+|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	96.9	7.1e-125
80233:80293	attR	CACAAAGTATTATTTTAAAATTGAGCTCAGACATTTATTTTTCAACTTTGCAACAGAACCG	NA	NA	NA	NA
>prophage 2
CP016158	Staphylococcus simulans strain MR2 plasmid unnamed1, complete sequence	146543	94572	122525	146543	transposase,integrase	Staphylococcus_phage(66.67%)	29	95291:95309	129166:129184
AWG19960.1|94572_95247_+|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	96.9	7.1e-125
AWG19961.1|95256_96102_-	replication protein	NA	NA	NA	NA	NA
95291:95309	attL	AACTTTGCAACAGAACCTT	NA	NA	NA	NA
AWG19962.1|96640_97186_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19963.1|97950_98163_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19964.1|98282_98426_-	Rep protein	NA	NA	NA	NA	NA
AWG19965.1|98457_99132_+|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	96.9	7.1e-125
AWG19966.1|99166_99988_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19967.1|100437_101004_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19968.1|102154_102874_-	replication protein	NA	NA	NA	NA	NA
AWG19969.1|103076_103751_+|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	98.2	1.7e-126
AWG19970.1|104025_104454_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19971.1|104468_104849_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19972.1|104990_106325_-|transposase	transposase	transposase	A0A1X9I5T2	Streptococcus_phage	47.2	8.0e-112
AWG19973.1|106452_106653_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19974.1|107044_107719_+|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	94.2	1.6e-121
AWG19975.1|107942_108143_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	61.9	2.5e-17
AWG19976.1|108573_109767_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
AWG19977.1|110223_110607_-	hypothetical protein	NA	A0A146ICT8	Staphylococcus_phage	49.1	1.7e-19
AWG19978.1|110701_111376_+|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	95.1	6.6e-123
AWG19979.1|111725_112283_+	hypothetical protein	NA	A0A0N9SJ02	Staphylococcus_phage	50.8	4.3e-27
AWG19980.1|112900_113509_+	transposon DNA-invertase	NA	G8I4U3	Mycobacterium_phage	30.2	5.0e-13
AWG19981.1|113691_113919_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19982.1|114353_116057_-	ABC transporter	NA	W8CYL7	Bacillus_phage	35.9	2.3e-79
AWG19983.1|116706_119280_-	serine/threonine protein kinase	NA	NA	NA	NA	NA
AWG19984.1|119494_120151_-	hypothetical protein	NA	NA	NA	NA	NA
AWG19985.1|120341_120665_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AWG19986.1|120657_121218_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19987.1|121229_121826_+	hypothetical protein	NA	NA	NA	NA	NA
AWG19988.1|121892_122525_+|integrase	integrase	integrase	A0A0N9RU54	Staphylococcus_phage	99.0	9.3e-119
129166:129184	attR	AAGGTTCTGTTGCAAAGTT	NA	NA	NA	NA
