The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029038	Salmonella enterica strain CFSAN045763 chromosome, complete genome	4766139	703703	711711	4766139	capsid,tail,protease,portal,terminase,head,transposase	uncultured_Caudovirales_phage(88.89%)	10	NA	NA
AWE32623.1|703703_704858_+|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	67.5	7.8e-148
AWE32624.1|704902_705463_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	84.7	2.2e-87
AWE32625.1|705464_706694_+|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	86.2	2.8e-212
AWE32626.1|706690_707029_+|head,tail	head-tail adaptor	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	46.8	6.6e-23
AWE32627.1|707021_707312_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JD08	uncultured_Caudovirales_phage	57.7	1.8e-29
AWE32628.1|707312_707756_+	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	63.9	1.2e-51
AWE32629.1|707896_708253_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	93.2	3.3e-57
AWE32630.1|708236_709898_+|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	94.2	1.5e-311
AWE32631.1|709985_710558_+	hypothetical protein	NA	NA	NA	NA	NA
AWE32632.1|710600_711711_+|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	25.0	4.9e-06
>prophage 2
CP029038	Salmonella enterica strain CFSAN045763 chromosome, complete genome	4766139	1730163	1739334	4766139	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
AWE33551.1|1730163_1731111_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
AWE33552.1|1731094_1731826_+	ABC transporter permease	NA	NA	NA	NA	NA
AWE33553.1|1731806_1731914_-	hypothetical protein	NA	NA	NA	NA	NA
AWE33554.1|1731973_1732705_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AWE33555.1|1732927_1734613_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
AWE33556.1|1734609_1735329_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AWE33557.1|1735375_1735843_+	DUF1456 domain-containing protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AWE33558.1|1735899_1736430_-	DUF1307 domain-containing protein	NA	NA	NA	NA	NA
AWE33559.1|1736601_1737060_-	DUF1307 domain-containing protein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
AWE33560.1|1737300_1739334_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
>prophage 3
CP029038	Salmonella enterica strain CFSAN045763 chromosome, complete genome	4766139	1820285	1826582	4766139		Enterobacteria_phage(50.0%)	6	NA	NA
AWE33626.1|1820285_1821689_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	2.3e-21
AWE33627.1|1821866_1822760_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
AWE33628.1|1823136_1824222_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
AWE33629.1|1824221_1825121_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
AWE36403.1|1825168_1826047_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	3.0e-107
AWE33630.1|1826051_1826582_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	56.5	1.4e-51
>prophage 4
CP029038	Salmonella enterica strain CFSAN045763 chromosome, complete genome	4766139	4351636	4398532	4766139	tRNA,plate,tail	Burkholderia_phage(34.78%)	49	NA	NA
AWE35972.1|4351636_4352635_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AWE35973.1|4352722_4354033_-	conjugal transfer protein	NA	NA	NA	NA	NA
AWE35974.1|4354279_4354795_+	transcriptional regulator Zur	NA	NA	NA	NA	NA
AWE35975.1|4354894_4355104_-	CsbD family protein	NA	NA	NA	NA	NA
AWE36506.1|4355125_4355239_-	hypothetical protein	NA	NA	NA	NA	NA
AWE35976.1|4355235_4356561_-	MATE family efflux transporter	NA	NA	NA	NA	NA
AWE35977.1|4356739_4357348_-	LexA repressor	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
AWE35978.1|4357456_4357825_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AWE35979.1|4357995_4360416_+	glycerol-3-phosphate 1-O-acyltransferase	NA	NA	NA	NA	NA
AWE35980.1|4360514_4361387_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
AWE35981.1|4361400_4361898_-	chorismate--pyruvate lyase	NA	NA	NA	NA	NA
AWE35982.1|4362078_4362996_-	maltose operon protein MalM	NA	NA	NA	NA	NA
AWE35983.1|4363159_4364518_-	maltoporin	NA	NA	NA	NA	NA
AWE35984.1|4364606_4365716_-	maltose/maltodextrin import ATP-binding protein MalK	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
AWE35985.1|4366077_4367268_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA	NA
AWE35986.1|4367399_4368944_+	maltose ABC transporter permease MalF	NA	NA	NA	NA	NA
AWE35987.1|4368958_4369849_+	maltose ABC transporter permease	NA	NA	NA	NA	NA
AWE35988.1|4370014_4370425_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
AWE35989.1|4370567_4372664_-	YjbH domain-containing protein	NA	NA	NA	NA	NA
AWE35990.1|4372663_4373401_-	hypothetical protein	NA	NA	NA	NA	NA
AWE35991.1|4373397_4374036_-	YjbF family lipoprotein	NA	NA	NA	NA	NA
AWE35992.1|4374099_4374342_-	outer membrane protein	NA	NA	NA	NA	NA
AWE35993.1|4374785_4376435_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
AWE35994.1|4376823_4378173_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
AWE35995.1|4378303_4378651_-	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
AWE35996.1|4379227_4379515_+	hypothetical protein	NA	Q6QIC8	Burkholderia_phage	48.1	3.0e-16
AWE35997.1|4379517_4380123_+	lytic murein transglycosylase	NA	Q5ZQZ1	Pseudomonas_phage	61.0	1.0e-61
AWE35998.1|4380135_4380450_+	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
AWE35999.1|4380609_4381065_+	hypothetical protein	NA	NA	NA	NA	NA
AWE36000.1|4381061_4381259_+	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
AWE36001.1|4381248_4382676_+|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	71.2	1.4e-194
AWE36002.1|4382675_4383200_+|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
AWE36003.1|4383251_4383569_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
AWE36004.1|4383528_4383657_+|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
AWE36005.1|4383753_4386120_+|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.9	2.7e-70
AWE36006.1|4386119_4387073_+	chemotaxis protein	NA	A4JWL1	Burkholderia_virus	51.5	7.9e-37
AWE36007.1|4387072_4387282_+	hypothetical protein	NA	A4JWL2	Burkholderia_virus	60.3	9.8e-17
AWE36008.1|4387269_4388313_+	phage protein D	NA	A4JWL3	Burkholderia_virus	45.9	2.9e-77
AWE36009.1|4388322_4389045_+|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	3.9e-12
AWE36010.1|4389372_4389735_+	GtrA family protein	NA	U5P0S6	Shigella_phage	70.8	9.6e-44
AWE36011.1|4389731_4390661_+	glycosyltransferase	NA	S5FKN0	Shigella_phage	83.8	6.7e-150
AWE36012.1|4390660_4392208_+	hypothetical protein	NA	B9UDL6	Salmonella_phage	29.9	2.5e-48
AWE36013.1|4392371_4392731_+|plate	baseplate protein	plate	Q6QIA0	Burkholderia_phage	63.3	3.1e-34
AWE36014.1|4392721_4393837_+|plate	baseplate protein	plate	Q6QI99	Burkholderia_phage	51.7	1.5e-100
AWE36015.1|4393829_4394462_+|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	1.1e-23
AWE36016.1|4394464_4395910_+	short-chain fatty acid transporter	NA	A0A0M3ULH6	Salmonella_phage	38.1	5.0e-75
AWE36017.1|4395912_4396614_+	DUF4376 domain-containing protein	NA	K7PMH7	Enterobacteria_phage	45.9	7.6e-29
AWE36018.1|4396610_4397066_+	hypothetical protein	NA	NA	NA	NA	NA
AWE36019.1|4397803_4398532_+	hypothetical protein	NA	A0A292GAQ8	Xanthomonas_phage	28.2	3.5e-13
