The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029034	Bacillus velezensis strain LDO2 chromosome, complete genome	3947271	1123891	1130144	3947271		Staphylococcus_phage(66.67%)	10	NA	NA
AWE15721.1|1123891_1125007_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	36.6	4.4e-55
AWE15722.1|1124987_1125635_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	44.3	1.1e-39
AWE15723.1|1125649_1126846_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	54.9	2.1e-116
AWE15724.1|1126878_1127343_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	59.3	1.2e-43
AWE15725.1|1127459_1127834_+	N-acetyltransferase	NA	NA	NA	NA	NA
AWE15726.1|1127739_1127955_-	hypothetical protein	NA	NA	NA	NA	NA
AWE15727.1|1127899_1128421_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
AWE15728.1|1128508_1128598_-	YjcZ family sporulation protein	NA	NA	NA	NA	NA
AWE15729.1|1128805_1129561_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.7	2.9e-10
AWE15730.1|1129550_1130144_+	segregation/condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	36.6	2.6e-14
>prophage 2
CP029034	Bacillus velezensis strain LDO2 chromosome, complete genome	3947271	1572021	1578235	3947271		Bacillus_phage(50.0%)	7	NA	NA
AWE16108.1|1572021_1572990_-	stage V sporulation protein K	NA	G3MAX6	Bacillus_virus	40.9	8.0e-53
AWE16109.1|1573038_1573263_+	hypothetical protein	NA	NA	NA	NA	NA
AWE16110.1|1573296_1574055_+	N-acetylmuramoyl-L-alanine amidase	NA	E5DV68	Deep-sea_thermophilic_phage	50.4	3.6e-53
AWE16111.1|1574104_1574725_-	hypothetical protein	NA	A0A127AYS1	Bacillus_phage	48.4	5.4e-47
AWE16112.1|1574773_1575763_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	F8WQ21	Bacillus_phage	83.0	1.1e-155
AWE16113.1|1575780_1577883_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	U5PY35	Bacillus_phage	85.7	0.0e+00
AWE16114.1|1577842_1578235_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	G3MBF1	Bacillus_virus	59.1	3.8e-30
>prophage 3
CP029034	Bacillus velezensis strain LDO2 chromosome, complete genome	3947271	2087415	2160763	3947271	terminase,tail,capsid,holin,protease,portal	Bacillus_phage(27.5%)	79	NA	NA
AWE16510.1|2087415_2088375_+|protease	serine protease	protease	A0A127AWU5	Bacillus_phage	50.9	9.0e-73
AWE16511.1|2088752_2091041_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
AWE16512.1|2091301_2093080_-	hypothetical protein	NA	NA	NA	NA	NA
AWE16513.1|2093855_2094893_+	collagen-like protein	NA	NA	NA	NA	NA
AWE16514.1|2094913_2096041_-	glycosyltransferase	NA	NA	NA	NA	NA
AWE16515.1|2096045_2096507_-	hypothetical protein	NA	NA	NA	NA	NA
AWE18299.1|2096637_2096976_+	hypothetical protein	NA	NA	NA	NA	NA
AWE16516.1|2097253_2097664_-	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
AWE16517.1|2097739_2098249_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AWE16518.1|2098276_2098702_-	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
AWE16519.1|2098815_2100063_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	50.1	8.0e-98
AWE16520.1|2100059_2101172_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	43.2	4.2e-74
AWE16521.1|2101541_2102444_-	formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	36.2	1.2e-15
AWE16522.1|2102518_2102833_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AWE16523.1|2102832_2103171_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AWE16524.1|2103358_2103904_-	N-acetyltransferase	NA	NA	NA	NA	NA
AWE16525.1|2104003_2104522_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AWE16526.1|2104711_2105572_+	hypothetical protein	NA	NA	NA	NA	NA
AWE16527.1|2105642_2106692_+	6-phosphogluconolactonase	NA	NA	NA	NA	NA
AWE16528.1|2106719_2107691_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.6	4.0e-20
AWE16529.1|2107694_2108594_-	NlpC/P60 family protein	NA	A0A0A8WIF2	Clostridium_phage	43.0	2.0e-18
AWE16530.1|2108590_2109688_-	dipeptide epimerase	NA	NA	NA	NA	NA
AWE16531.1|2109694_2110630_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
AWE16532.1|2110717_2112337_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AWE16533.1|2112333_2113362_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.0e-17
AWE16534.1|2113367_2114315_-	ABC transporter permease	NA	NA	NA	NA	NA
AWE16535.1|2114320_2115247_-	ABC transporter permease	NA	NA	NA	NA	NA
AWE16536.1|2115261_2116086_-	aminopeptidase	NA	NA	NA	NA	NA
AWE16537.1|2116241_2117801_-	MFS transporter	NA	NA	NA	NA	NA
AWE16538.1|2118085_2119438_+	PDZ domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	33.0	3.5e-22
AWE16539.1|2119801_2120773_-	glycosyltransferase	NA	A0A2H5BFL1	Salmonella_phage	41.6	3.8e-63
AWE16540.1|2120784_2122944_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
AWE16541.1|2123127_2124078_-	ring-cleaving dioxygenase	NA	NA	NA	NA	NA
AWE16542.1|2124399_2125716_+	amino acid permease	NA	NA	NA	NA	NA
AWE16543.1|2126001_2126619_+	DUF47 domain-containing protein	NA	NA	NA	NA	NA
AWE16544.1|2126631_2127630_+	inorganic phosphate transporter	NA	NA	NA	NA	NA
AWE16545.1|2127734_2128481_+	type II toxin-antitoxin system SpoIISA family toxin	NA	NA	NA	NA	NA
AWE16546.1|2128481_2128652_+	stage II sporulation protein SB	NA	NA	NA	NA	NA
AWE16547.1|2128908_2129787_-	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXD7	Bacillus_phage	60.2	3.1e-80
AWE16548.1|2129800_2130064_-|holin	phage holin	holin	A0A2H4J6M0	uncultured_Caudovirales_phage	65.5	2.3e-23
AWE16549.1|2130077_2130341_-	protein xhlA	NA	A0A2H4JD40	uncultured_Caudovirales_phage	63.1	8.8e-23
AWE16550.1|2130392_2131154_-|portal	phage portal protein	portal	NA	NA	NA	NA
AWE16551.1|2131210_2131408_-	XkdX family protein	NA	A0A2H4JAA1	uncultured_Caudovirales_phage	60.0	2.8e-13
AWE16552.1|2131412_2131784_-	hypothetical protein	NA	NA	NA	NA	NA
AWE16553.1|2131796_2133419_-	hypothetical protein	NA	A0A1P8CWR7	Bacillus_phage	40.2	1.3e-42
AWE16554.1|2133421_2133694_-	hypothetical protein	NA	NA	NA	NA	NA
AWE16555.1|2133690_2134269_-	DUF2313 domain-containing protein	NA	A0A0A7RTT8	Clostridium_phage	30.6	5.3e-12
AWE16556.1|2134252_2135299_-|portal	phage portal protein	portal	S6AVU3	Thermus_phage	43.8	2.3e-69
AWE16557.1|2135291_2135717_-	DUF2634 domain-containing protein	NA	A0A0A7RTU4	Clostridium_phage	34.7	5.6e-11
AWE16558.1|2135820_2136087_-	DUF2577 domain-containing protein	NA	S6C459	Thermus_phage	38.6	1.2e-06
AWE16559.1|2136086_2137064_-|portal	phage portal protein	portal	A0A1L6BY20	Clostridium_phage	30.6	4.9e-34
AWE16560.1|2137077_2137737_-	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	45.3	1.8e-08
AWE16561.1|2137729_2142835_-|portal	phage portal protein	portal	A0A1L2JY60	Aeribacillus_phage	46.6	2.0e-41
AWE16562.1|2142822_2142975_-	hypothetical protein	NA	NA	NA	NA	NA
AWE16563.1|2143016_2143463_-|portal	phage portal protein	portal	A0A0A7RTY8	Clostridium_phage	35.8	1.0e-10
AWE16564.1|2143538_2143982_-|portal	phage portal protein	portal	A0A0K2CNG3	Brevibacillus_phage	45.2	8.4e-26
AWE16565.1|2143983_2145381_-|tail	phage tail sheath protein	tail	A0A0A7RTT5	Clostridium_phage	40.4	9.0e-82
AWE16566.1|2145380_2145590_-	hypothetical protein	NA	NA	NA	NA	NA
AWE16567.1|2145586_2146033_-|portal	phage portal protein	portal	NA	NA	NA	NA
AWE16568.1|2146029_2146533_-	HK97 gp10 family phage protein	NA	A0A249XXA4	Clostridium_phage	41.7	5.4e-37
AWE16569.1|2146529_2146886_-	DUF3599 domain-containing protein	NA	NA	NA	NA	NA
AWE16570.1|2146882_2147266_-	DUF3199 domain-containing protein	NA	NA	NA	NA	NA
AWE16571.1|2147282_2148218_-|capsid	phage major capsid protein	capsid	A0A1B1P7E3	Bacillus_phage	62.8	3.3e-104
AWE16572.1|2148244_2149090_-|portal	phage portal protein	portal	A0A1B1P7E4	Bacillus_phage	58.1	2.5e-55
AWE18300.1|2149109_2150501_-|portal	phage portal protein	portal	A0A1B1P7C8	Bacillus_phage	55.8	1.8e-138
AWE16573.1|2150549_2151848_-|terminase	PBSX family phage terminase large subunit	terminase	M4ZRM5	Bacillus_phage	58.9	2.7e-149
AWE16574.1|2151844_2152642_-|terminase	terminase	terminase	A0A0S2MVB6	Bacillus_phage	49.8	6.1e-59
AWE16575.1|2152754_2153267_-	Fis family transcriptional regulator	NA	A0A0K2CNQ1	Brevibacillus_phage	44.6	2.2e-22
AWE16576.1|2153373_2153577_-	hypothetical protein	NA	A0A2H4J4M6	uncultured_Caudovirales_phage	48.5	5.4e-12
AWE16577.1|2153566_2153908_-|portal	phage portal protein	portal	NA	NA	NA	NA
AWE16578.1|2154172_2154973_-	ATP-binding protein	NA	A6XMI1	Bacillus_virus	49.8	4.7e-59
AWE16579.1|2154872_2155700_-|portal	phage portal protein	portal	S6BFM4	Thermus_phage	49.0	1.7e-19
AWE16580.1|2155689_2155869_-	hypothetical protein	NA	NA	NA	NA	NA
AWE16581.1|2156059_2156398_+	XRE family transcriptional regulator	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	45.8	8.4e-18
AWE16582.1|2156546_2157137_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4JA43	uncultured_Caudovirales_phage	51.7	3.0e-39
AWE16583.1|2157276_2157882_-	hypothetical protein	NA	A0A0Y0AJU6	Bacillus_phage	47.8	5.1e-42
AWE16584.1|2157991_2158369_+	PH domain-containing protein	NA	A5GYQ0	Lactococcus_phage	41.4	1.5e-15
AWE16585.1|2158406_2159360_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A218KC88	Bacillus_phage	69.3	1.1e-62
AWE16586.1|2159626_2160763_-	tetratricopeptide repeat protein	NA	A0A1P8CWN8	Bacillus_phage	47.9	1.3e-94
>prophage 4
CP029034	Bacillus velezensis strain LDO2 chromosome, complete genome	3947271	2220130	2235643	3947271	coat,tRNA	Anomala_cuprea_entomopoxvirus(50.0%)	22	NA	NA
AWE18302.1|2220130_2220487_+|tRNA	tRNA-Val4	tRNA	NA	NA	NA	NA
AWE16642.1|2220942_2222118_-	cystathionine beta-lyase MetC	NA	NA	NA	NA	NA
AWE16643.1|2222110_2223232_-	methionine biosynthesis PLP-dependent protein	NA	NA	NA	NA	NA
AWE16644.1|2223601_2224324_+	esterase family protein	NA	NA	NA	NA	NA
AWE16645.1|2224349_2224865_+	hypothetical protein	NA	NA	NA	NA	NA
AWE16646.1|2224869_2225301_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AWE16647.1|2225461_2225695_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
AWE16648.1|2225695_2226433_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	34.2	2.0e-27
AWE16649.1|2226425_2227148_+	ABC transporter permease	NA	NA	NA	NA	NA
AWE16650.1|2227189_2227939_-	subclass B1 metallo-beta-lactamase	NA	NA	NA	NA	NA
AWE16651.1|2228008_2228263_-	hypothetical protein	NA	NA	NA	NA	NA
AWE16652.1|2228383_2230669_+	ATP-dependent helicase	NA	A0A068EQC7	Bacillus_phage	33.3	1.9e-84
AWE16653.1|2230737_2230992_-	sporulation protein	NA	NA	NA	NA	NA
AWE16654.1|2231158_2231320_-	YjcZ family sporulation protein	NA	NA	NA	NA	NA
AWE16655.1|2231411_2231609_-	hypothetical protein	NA	NA	NA	NA	NA
AWE16656.1|2231895_2232252_-	DUF1360 domain-containing protein	NA	NA	NA	NA	NA
AWE16657.1|2232422_2232809_+|coat	spore coat protein	coat	NA	NA	NA	NA
AWE16658.1|2232846_2233161_+|coat	spore coat protein	coat	NA	NA	NA	NA
AWE16659.1|2233253_2233754_+|coat	spore coat protein	coat	NA	NA	NA	NA
AWE16660.1|2233904_2234387_+|coat	spore coat protein	coat	NA	NA	NA	NA
AWE16661.1|2234532_2234976_+|coat	spore coat protein	coat	NA	NA	NA	NA
AWE16662.1|2235034_2235643_-|coat	spore coat protein	coat	NA	NA	NA	NA
>prophage 5
CP029034	Bacillus velezensis strain LDO2 chromosome, complete genome	3947271	2712538	2722429	3947271		Synechococcus_phage(50.0%)	9	NA	NA
AWE17105.1|2712538_2714077_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	50.8	1.1e-77
AWE17106.1|2714073_2714661_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.3	1.0e-26
AWE17107.1|2714657_2715698_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	41.1	2.4e-63
AWE17108.1|2715789_2717220_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	3.7e-54
AWE17109.1|2717195_2719424_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.5	1.6e-157
AWE17110.1|2719407_2720091_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
AWE17111.1|2720087_2720342_-	phosphoribosylformylglycinamidine synthase, purS protein	NA	M4QPE7	Synechococcus_phage	33.3	4.7e-05
AWE17112.1|2720341_2721061_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3G7P8	Synechococcus_phage	44.7	2.6e-48
AWE17113.1|2721136_2722429_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	27.3	7.7e-19
>prophage 6
CP029034	Bacillus velezensis strain LDO2 chromosome, complete genome	3947271	3627126	3670037	3947271	coat,lysis,holin	Bacillus_phage(50.0%)	46	NA	NA
AWE17910.1|3627126_3627807_-|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
AWE17911.1|3627788_3628175_-|holin	holin-like protein CidA	holin	NA	NA	NA	NA
AWE17912.1|3628281_3629190_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AWE17913.1|3629192_3630011_+	hydroxyethylthiazole kinase	NA	NA	NA	NA	NA
AWE17914.1|3630007_3630682_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
AWE17915.1|3631094_3632351_+	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA	NA
AWE17916.1|3632436_3633039_+	DsbA family oxidoreductase	NA	NA	NA	NA	NA
AWE17917.1|3633059_3633734_-	streptomycin biosynthesis protein StrF	NA	NA	NA	NA	NA
AWE17918.1|3633733_3634414_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AWE17919.1|3634630_3634792_-	DNA-binding anti-repressor SinI	NA	NA	NA	NA	NA
AWE17920.1|3635127_3635751_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AWE18370.1|3635830_3636217_+	GtrA family protein	NA	NA	NA	NA	NA
AWE17921.1|3636268_3637453_+	galactokinase	NA	NA	NA	NA	NA
AWE17922.1|3637442_3638984_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
AWE17923.1|3639001_3639247_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AWE18371.1|3639750_3640716_+	cytochrome aa3 quinol oxidase subunit II	NA	NA	NA	NA	NA
AWE17924.1|3640743_3642693_+	cytochrome aa3 quinol oxidase subunit I	NA	NA	NA	NA	NA
AWE17925.1|3642707_3643322_+	cytochrome aa3 quinol oxidase subunit III	NA	NA	NA	NA	NA
AWE17926.1|3643323_3643692_+	cytochrome aa3 quinol oxidase subunit IV	NA	NA	NA	NA	NA
AWE17927.1|3643735_3643996_-	spore gernimation protein	NA	NA	NA	NA	NA
AWE17928.1|3644288_3644747_+	N-acetyltransferase	NA	NA	NA	NA	NA
AWE17929.1|3644948_3646136_+	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
AWE17930.1|3646238_3646988_+	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA	NA
AWE17931.1|3647151_3648153_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
AWE17932.1|3648194_3650606_-	peptidase S8	NA	A0A217EQY2	Bacillus_phage	36.8	3.8e-19
AWE17933.1|3651131_3651446_+	hypothetical protein	NA	NA	NA	NA	NA
AWE17934.1|3651469_3652300_+	transcription antiterminator	NA	NA	NA	NA	NA
AWE17935.1|3652518_3653901_+	PTS sucrose transporter subunit IIBC	NA	NA	NA	NA	NA
AWE17936.1|3653897_3655337_+	sucrose-6-phosphate hydrolase	NA	F8WPR5	Bacillus_phage	25.7	3.7e-22
AWE17937.1|3655436_3655676_+	hypothetical protein	NA	NA	NA	NA	NA
AWE18372.1|3655706_3656519_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
AWE17938.1|3656668_3657007_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AWE17939.1|3657678_3658206_+	hypothetical protein	NA	NA	NA	NA	NA
AWE18373.1|3658290_3659097_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AWE17940.1|3659111_3659795_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	44.7	3.2e-48
AWE18374.1|3659853_3660276_+	hypothetical protein	NA	NA	NA	NA	NA
AWE17941.1|3660294_3661614_+	purine permease	NA	NA	NA	NA	NA
AWE17942.1|3661677_3662049_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AWE17943.1|3662095_3662641_-|coat	spore coat protein GerQ	coat	NA	NA	NA	NA
AWE17944.1|3662921_3663692_+	glycosyltransferase family 2 protein	NA	A0A0F7L2F7	uncultured_marine_virus	26.3	4.4e-06
AWE17945.1|3663696_3665121_+	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
AWE17946.1|3665143_3666313_+	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
AWE17947.1|3666313_3667177_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AWE17948.1|3667176_3668298_+|coat	spore coat protein	coat	NA	NA	NA	NA
AWE17949.1|3668287_3669031_+|coat	spore coat protein	coat	NA	NA	NA	NA
AWE17950.1|3669032_3670037_+|coat	spore coat protein	coat	NA	NA	NA	NA
