The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP028990	Klebsiella pneumoniae strain AR_0142 chromosome, complete genome	5275382	473254	480159	5275382		Planktothrix_phage(33.33%)	6	NA	NA
AWD98630.1|473254_474118_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
AWD94242.1|474128_474902_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.2	3.0e-26
AWD98631.1|475143_476037_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
AWD94243.1|476281_477643_-	U32 family peptidase	NA	Q6DW11	Phage_TP	94.5	3.9e-207
AWD94244.1|477961_478684_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
AWD94245.1|478680_480159_-	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	1.4e-29
>prophage 2
CP028990	Klebsiella pneumoniae strain AR_0142 chromosome, complete genome	5275382	490623	600132	5275382	transposase,tail	Escherichia_phage(30.3%)	84	NA	NA
AWD94251.1|490623_491649_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AWD94252.1|491967_492891_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AWD94253.1|493230_494256_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AWD94254.1|494252_494462_-	hypothetical protein	NA	NA	NA	NA	NA
AWD94255.1|494673_495285_-	transcriptional regulator	NA	NA	NA	NA	NA
AWD94256.1|495724_496705_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	98.8	5.2e-185
AWD94257.1|496977_497679_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AWD94258.1|497693_499550_-	histidine kinase	NA	NA	NA	NA	NA
AWD94259.1|499838_501191_-	molecular chaperone	NA	NA	NA	NA	NA
AWD94260.1|501207_501318_+	DNA-3-methyladenine glycosidase	NA	NA	NA	NA	NA
AWD94261.1|501328_502177_+	DNA-3-methyladenine glycosylase 2	NA	NA	NA	NA	NA
AWD94262.1|502291_502933_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.3	2.0e-36
AWD94263.1|503023_503605_+	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	41.6	5.1e-31
AWD94264.1|503635_505483_+	outer membrane assembly protein AsmA	NA	NA	NA	NA	NA
AWD94265.1|505714_507298_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	43.5	5.0e-36
AWD98632.1|508063_508954_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.6	3.3e-45
AWD94266.1|509346_509976_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AWD94267.1|510935_512375_+	capsule assembly Wzi family protein	NA	NA	NA	NA	NA
AWD94268.1|512520_513654_+	polysaccharide export protein Wza	NA	NA	NA	NA	NA
AWD98633.1|513659_514094_+	protein tyrosine phosphatase	NA	NA	NA	NA	NA
AWD94269.1|514110_516273_+	tyrosine-protein kinase	NA	NA	NA	NA	NA
AWD94270.1|516345_517776_+	undecaprenyl-phosphate galactose phosphotransferase WbaP	NA	NA	NA	NA	NA
AWD94271.1|517799_519263_+	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AWD94272.1|519255_520386_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AWD94273.1|520394_521489_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AWD94274.1|522033_522345_-	hypothetical protein	NA	NA	NA	NA	NA
AWD94275.1|522701_523976_+|tail	phage tail protein	tail	A0A1J0MHZ5	Klebsiella_phage	46.5	1.4e-97
AWD94276.1|524553_524976_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94277.1|525089_526241_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AWD94278.1|526424_527348_+|transposase	IS5-like element IS903B family transposase	transposase	Q9MCT5	Escherichia_phage	99.3	1.1e-176
AWD94279.1|527452_528859_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	3.6e-38
AWD94280.1|529046_529970_-|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	98.7	2.7e-175
AWD94281.1|530150_531566_+	mannose-1-phosphate guanylyltransferase	NA	A0A1V0SH58	Hokovirus	31.0	1.4e-53
AWD94282.1|531587_532958_+	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	25.9	1.1e-31
AWD94283.1|533121_534288_+	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	9.1e-112
AWD94284.1|534480_535488_+	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	28.0	4.4e-30
AWD94285.1|536346_537270_-|transposase	IS5-like element IS903B family transposase	transposase	Q9MCT5	Escherichia_phage	99.3	1.1e-176
AWD94286.1|538119_539145_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AWD94287.1|539463_540387_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AWD94288.1|540726_541752_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AWD94289.1|541748_541958_-	hypothetical protein	NA	NA	NA	NA	NA
AWD94290.1|542169_542781_-	transcriptional regulator	NA	NA	NA	NA	NA
AWD94291.1|543220_544201_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	98.8	5.2e-185
AWD94292.1|544473_545175_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AWD94293.1|545189_547046_-	histidine kinase	NA	NA	NA	NA	NA
AWD94294.1|547334_548687_-	molecular chaperone	NA	NA	NA	NA	NA
AWD94295.1|548703_548814_+	DNA-3-methyladenine glycosidase	NA	NA	NA	NA	NA
AWD94296.1|548824_549673_+	DNA-3-methyladenine glycosylase 2	NA	NA	NA	NA	NA
AWD94297.1|549787_550429_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.3	2.0e-36
AWD94298.1|550519_551101_+	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	41.6	5.1e-31
AWD94299.1|551131_552979_+	outer membrane assembly protein AsmA	NA	NA	NA	NA	NA
AWD94300.1|553210_554794_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	43.5	5.0e-36
AWD98634.1|555559_556450_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.6	3.3e-45
AWD94301.1|556842_557472_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AWD94302.1|558431_559871_+	capsule assembly Wzi family protein	NA	NA	NA	NA	NA
AWD94303.1|560016_561150_+	polysaccharide export protein Wza	NA	NA	NA	NA	NA
AWD98635.1|561155_561590_+	protein tyrosine phosphatase	NA	NA	NA	NA	NA
AWD94304.1|561606_563769_+	tyrosine-protein kinase	NA	NA	NA	NA	NA
AWD94305.1|563841_565272_+	undecaprenyl-phosphate galactose phosphotransferase WbaP	NA	NA	NA	NA	NA
AWD94306.1|565295_566759_+	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AWD94307.1|566751_567882_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AWD94308.1|567890_568985_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AWD94309.1|569529_569841_-	hypothetical protein	NA	NA	NA	NA	NA
AWD94310.1|570197_571472_+|tail	phage tail protein	tail	A0A1J0MHZ5	Klebsiella_phage	46.5	1.4e-97
AWD94311.1|572049_572472_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94312.1|572585_573737_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AWD94313.1|573920_574844_+|transposase	IS5-like element IS903B family transposase	transposase	Q9MCT5	Escherichia_phage	99.3	1.1e-176
AWD94314.1|574948_576355_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	3.6e-38
AWD94315.1|576542_577466_-|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	98.7	2.7e-175
AWD94316.1|577646_579062_+	mannose-1-phosphate guanylyltransferase	NA	A0A1V0SH58	Hokovirus	31.0	1.4e-53
AWD94317.1|579082_580453_+	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	25.9	1.1e-31
AWD94318.1|580616_581783_+	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	9.1e-112
AWD94319.1|581975_582983_+	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	28.0	4.4e-30
AWD94320.1|583841_584765_-|transposase	IS5-like element IS903B family transposase	transposase	Q9MCT5	Escherichia_phage	99.3	1.1e-176
AWD94321.1|585614_586640_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AWD94322.1|586958_587882_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AWD98636.1|590131_590899_+	ABC transporter permease	NA	NA	NA	NA	NA
AWD94323.1|590898_591639_+	O-antigen export system ATP-binding protein RfbB	NA	A0A2K9L3Z8	Tupanvirus	24.9	1.7e-07
AWD94324.1|591654_593550_+	DUF4422 domain-containing protein	NA	NA	NA	NA	NA
AWD94325.1|593565_594720_+	UDP-galactopyranose mutase	NA	E4ZFQ1	Streptococcus_phage	41.7	8.5e-78
AWD94326.1|594716_595610_+	glycosyl transferase	NA	NA	NA	NA	NA
AWD94327.1|595807_596731_-|transposase	IS5/IS1182 family transposase	transposase	Q9MCT5	Escherichia_phage	99.0	9.2e-176
AWD94328.1|597914_599123_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	39.1	4.4e-08
AWD94329.1|599208_600132_-|transposase	IS5-like element IS903B family transposase	transposase	Q9MCT5	Escherichia_phage	99.3	1.1e-176
>prophage 3
CP028990	Klebsiella pneumoniae strain AR_0142 chromosome, complete genome	5275382	687469	697016	5275382	transposase	Burkholderia_phage(33.33%)	9	NA	NA
AWD94402.1|687469_688393_+|transposase	IS5-like element IS903B family transposase	transposase	Q9MCT5	Escherichia_phage	99.3	1.1e-176
AWD94403.1|688572_689718_-	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	58.7	1.1e-117
AWD94404.1|690256_690538_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94405.1|690580_691288_+	phosphohydrolase	NA	S4W232	Pandoravirus	27.7	2.8e-07
AWD94406.1|691331_692765_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	53.0	4.0e-101
AWD98643.1|692745_693240_+	very short patch repair endonuclease	NA	E5E3X5	Burkholderia_phage	50.7	5.7e-31
AWD94407.1|693214_694126_-	drug/metabolite exporter YedA	NA	NA	NA	NA	NA
AWD94408.1|694309_695221_+	DUF808 domain-containing protein	NA	NA	NA	NA	NA
AWD94409.1|695336_697016_+	cellulose biosynthesis regulator YedQ	NA	A0A127AWB9	Bacillus_phage	41.1	6.9e-20
>prophage 4
CP028990	Klebsiella pneumoniae strain AR_0142 chromosome, complete genome	5275382	858356	869643	5275382		Klebsiella_phage(40.0%)	17	NA	NA
AWD94561.1|858356_859652_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	36.8	9.6e-62
AWD94562.1|859666_860473_+	molybdenum ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AWD94563.1|860713_861976_-	DUF3596 domain-containing protein	NA	A0A286S1S8	Klebsiella_phage	94.8	1.5e-232
AWD94564.1|862018_862264_-	excisionase	NA	A0A286S2A4	Klebsiella_phage	93.4	3.8e-36
AWD94565.1|862481_863231_-	hypothetical protein	NA	A0A077KCB2	Edwardsiella_phage	60.3	2.3e-84
AWD94566.1|863227_863452_-	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	60.8	1.5e-18
AWD94567.1|863448_863676_-	hypothetical protein	NA	A0A291LBA3	Klebsiella_phage	48.4	2.1e-09
AWD94568.1|863975_864269_-	host cell division inhibitory peptide Kil	NA	NA	NA	NA	NA
AWD94569.1|864462_864651_-	hypothetical protein	NA	NA	NA	NA	NA
AWD94570.1|865422_866019_-	XRE family transcriptional regulator	NA	K7P850	Enterobacteria_phage	27.1	4.1e-07
AWD94571.1|866127_866340_+	transcriptional regulator	NA	NA	NA	NA	NA
AWD94572.1|866360_866681_+	hypothetical protein	NA	A0A0M4RU01	Salmonella_phage	68.9	5.0e-36
AWD94573.1|866876_867131_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94574.1|867127_868222_+	hypothetical protein	NA	K7PLZ7	Enterobacterial_phage	40.3	9.7e-31
AWD94575.1|868248_868644_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94576.1|868643_868865_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94577.1|868857_869643_+	hypothetical protein	NA	C7BGF1	Burkholderia_phage	52.1	1.5e-62
>prophage 5
CP028990	Klebsiella pneumoniae strain AR_0142 chromosome, complete genome	5275382	873905	930428	5275382	protease,portal,capsid,plate,head,holin,terminase,transposase,tail	Vibrio_phage(34.85%)	77	NA	NA
AWD94582.1|873905_874499_+	hypothetical protein	NA	A0A0M4RU10	Salmonella_phage	63.2	1.2e-40
AWD94583.1|874495_875266_+	dcm methylase	NA	D5LH17	Escherichia_phage	51.2	3.0e-63
AWD94584.1|875262_875907_+	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	80.5	1.2e-102
AWD94585.1|875903_876503_+	hypothetical protein	NA	H9C175	Pectobacterium_phage	58.9	1.1e-65
AWD94586.1|877140_877410_+|holin	holin	holin	K7P6H9	Enterobacteria_phage	77.2	8.1e-32
AWD98654.1|877387_877888_+	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	84.4	5.9e-76
AWD94587.1|877884_878376_+	Fis family transcriptional regulator	NA	Q2NPG0	Xanthomonas_virus	43.9	7.4e-31
AWD94588.1|878477_878828_+	hypothetical protein	NA	H2EQH5	Salmonella_phage	39.7	5.5e-12
AWD94589.1|879238_879472_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94590.1|879459_879810_+	HNH endonuclease	NA	K7PHK9	Enterobacteria_phage	78.4	4.6e-51
AWD94591.1|879939_880434_+|terminase	phage terminase small subunit P27 family	terminase	Q8HAD7	Salmonella_phage	92.0	1.2e-81
AWD94592.1|880430_882161_+|terminase	terminase large subunit	terminase	Q8HAD6	Salmonella_phage	83.0	2.3e-300
AWD94593.1|882170_882356_+	hypothetical protein	NA	A0A1B5FP99	Escherichia_phage	63.9	5.2e-14
AWD94594.1|882355_883585_+|portal	phage portal protein	portal	U5P411	Shigella_phage	81.7	1.3e-201
AWD94595.1|883571_884225_+|head,protease	HK97 family phage prohead protease	head,protease	Q8W628	Enterobacteria_phage	87.9	9.3e-106
AWD94596.1|884239_885448_+|capsid	phage major capsid protein	capsid	A0A192Y5T6	Salmonella_phage	84.2	2.2e-193
AWD94597.1|885474_885690_+	hypothetical protein	NA	M1FN89	Enterobacteria_phage	42.4	7.2e-07
AWD94598.1|885686_886007_+|head,tail	phage gp6-like head-tail connector protein	head,tail	K7PKT4	Enterobacteria_phage	39.8	1.7e-15
AWD94599.1|886076_886274_+	hypothetical protein	NA	A0A286S2A5	Klebsiella_phage	96.9	2.4e-25
AWD94600.1|886275_886608_+|head,tail	head-tail adaptor protein	head,tail	A0A286S2A2	Klebsiella_phage	98.2	2.9e-55
AWD94601.1|886600_887140_+	hypothetical protein	NA	A0A286S249	Klebsiella_phage	95.5	3.7e-92
AWD94602.1|887136_887502_+	DUF3168 domain-containing protein	NA	A0A286S1R1	Klebsiella_phage	95.0	5.4e-63
AWD94603.1|887558_888050_+|tail	phage tail protein	tail	A0A286S1Q8	Klebsiella_phage	100.0	2.3e-88
AWD94604.1|888093_888447_+|tail	phage tail protein	tail	A0A286S1N4	Klebsiella_phage	99.1	4.9e-61
AWD94605.1|888479_888743_+|tail	phage tail protein	tail	A0A286S1P2	Klebsiella_phage	96.6	1.0e-42
AWD94606.1|888807_889275_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94607.1|889319_891764_+|tail	phage tail tape measure protein	tail	A0A286S1S3	Klebsiella_phage	61.3	1.1e-252
AWD94608.1|891763_892234_+	hypothetical protein	NA	A0A286S298	Klebsiella_phage	67.7	8.3e-64
AWD94609.1|892230_892713_+	DUF1833 domain-containing protein	NA	A0A286S2B1	Klebsiella_phage	90.6	2.1e-78
AWD94610.1|892723_893104_+	nitrite transporter	NA	A0A286S2A6	Klebsiella_phage	94.4	6.9e-69
AWD94611.1|893467_894031_-	transcriptional regulator	NA	NA	NA	NA	NA
AWD98655.1|894212_894437_+	transcriptional regulator	NA	M1PVU4	Vibrio_phage	57.1	1.5e-15
AWD94612.1|896569_897517_+	DNA transposition protein	NA	A0A0C4UQR3	Shigella_phage	79.4	2.9e-140
AWD94613.1|897521_897761_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94614.1|897763_898051_+	HTH domain-containing protein	NA	C9DGL7	Escherichia_phage	48.3	3.5e-17
AWD94615.1|898066_898684_+	DUF3164 domain-containing protein	NA	A0A2I7S9B0	Vibrio_phage	59.9	2.6e-65
AWD94616.1|898764_899262_+	hypothetical protein	NA	A0A0A7RUP4	Clostridium_phage	36.0	1.9e-05
AWD94617.1|899221_899698_+	hypothetical protein	NA	K7PHA5	Enterobacterial_phage	37.2	3.3e-12
AWD94618.1|899694_900249_+	regulatory protein GemA	NA	A0A0C4UQU3	Shigella_phage	46.7	2.4e-38
AWD94619.1|900245_900635_+	transcriptional regulator	NA	A0A0C4UR27	Shigella_phage	58.1	4.6e-36
AWD94620.1|900911_901928_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.7	9.8e-187
AWD98656.1|901965_902091_-	sugar kinase	NA	Q6QLL3	Human_immunodeficiency_virus	100.0	1.3e-13
AWD94621.1|902423_903002_+	peptidoglycan-binding protein	NA	A0A2I7S9B9	Vibrio_phage	46.0	5.1e-39
AWD94622.1|903004_903223_+	hypothetical protein	NA	A0A0C4UQR6	Shigella_phage	70.8	1.7e-24
AWD94623.1|903215_903623_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94624.1|903610_904216_+	hypothetical protein	NA	M4MB79	Vibrio_phage	39.8	1.2e-22
AWD94625.1|904212_904443_+	conjugal transfer protein TraR	NA	NA	NA	NA	NA
AWD94626.1|904423_904726_+	DUF2730 domain-containing protein	NA	M1Q558	Vibrio_phage	42.6	4.3e-13
AWD94627.1|904735_905023_+	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	64.5	8.4e-27
AWD94628.1|905025_905301_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94629.1|905290_905869_+	DUF3486 domain-containing protein	NA	M4MCR3	Vibrio_phage	59.2	1.8e-52
AWD94630.1|905865_907455_+	hypothetical protein	NA	M4MHG0	Vibrio_phage	68.5	2.7e-199
AWD94631.1|907454_909026_+	DUF935 domain-containing protein	NA	A0A2I7S9K0	Vibrio_phage	56.2	4.6e-159
AWD94632.1|909018_909861_+	hypothetical protein	NA	M1PVV7	Vibrio_phage	56.9	1.7e-88
AWD94633.1|910049_911066_+	peptidase	NA	M1Q578	Vibrio_phage	49.1	3.9e-74
AWD94634.1|911068_911968_+|head	phage head protein	head	M4MB71	Vibrio_phage	59.4	1.5e-101
AWD94635.1|912044_912551_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94636.1|912550_912991_+	DUF1320 domain-containing protein	NA	A0A2I7S9E9	Vibrio_phage	47.9	4.9e-34
AWD94637.1|912990_913533_+	phage morphogenesis protein	NA	A0A2I7S9D7	Vibrio_phage	64.2	2.9e-60
AWD94638.1|913529_914141_+	hypothetical protein	NA	M1PJ94	Vibrio_phage	40.8	1.4e-39
AWD94639.1|914143_914353_+	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
AWD94640.1|914354_915836_+|tail	phage tail protein	tail	M1Q565	Vibrio_phage	60.2	9.6e-167
AWD94641.1|915845_916199_+|tail	phage tail protein	tail	A0A2P1A4D6	Alteromonadaceae_phage	34.2	7.7e-14
AWD94642.1|916202_916586_+	hypothetical protein	NA	A0A2P9JZJ9	Alteromonadaceae_phage	40.5	3.4e-15
AWD94643.1|916488_916707_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94644.1|916684_918493_+|tail	phage tail protein	tail	M4MHE6	Vibrio_phage	31.4	3.8e-64
AWD94645.1|918492_919749_+	multidrug DMT transporter	NA	M4M9N2	Vibrio_phage	42.0	2.2e-87
AWD94646.1|919741_920833_+|tail	phage tail protein	tail	M4M9L5	Vibrio_phage	49.0	1.3e-91
AWD94647.1|920823_921363_+|plate	phage baseplate assembly protein V	plate	A0A2I7S9F6	Vibrio_phage	44.4	1.1e-32
AWD94648.1|921359_921812_+	hypothetical protein	NA	A0A2I7S9F0	Vibrio_phage	43.4	6.6e-26
AWD94649.1|921798_922875_+|plate	phage baseplate protein	plate	A0A2I7S9E5	Vibrio_phage	52.0	1.0e-101
AWD94650.1|922859_923444_+	DUF2313 domain-containing protein	NA	M4M9M8	Vibrio_phage	47.7	4.8e-45
AWD94651.1|923446_924259_+|tail	phage tail protein	tail	X2KTY7	Enterobacteria_phage	66.7	6.9e-26
AWD94652.1|924258_925134_+|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	37.0	2.2e-25
AWD94653.1|925143_927129_+	hypothetical protein	NA	A0A1J0MHZ5	Klebsiella_phage	45.2	1.7e-126
AWD94654.1|927125_927395_+	hypothetical protein	NA	NA	NA	NA	NA
AWD94655.1|927494_930428_+	kinase	NA	A0A286S259	Klebsiella_phage	90.9	0.0e+00
>prophage 6
CP028990	Klebsiella pneumoniae strain AR_0142 chromosome, complete genome	5275382	1481327	1492215	5275382		Escherichia_phage(87.5%)	10	NA	NA
AWD95156.1|1481327_1481948_-	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
AWD95157.1|1481940_1483206_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.3	6.6e-233
AWD95158.1|1483217_1484120_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
AWD95159.1|1484157_1484391_-	hypothetical protein	NA	NA	NA	NA	NA
AWD95160.1|1484381_1485143_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
AWD95161.1|1485163_1486024_-	inhibitor-resistant class A broad-spectrum beta-lactamase SHV-26	NA	A0A077SL40	Escherichia_phage	99.3	1.7e-155
AWD95162.1|1486321_1486582_+	hypothetical protein	NA	A0A077SK33	Escherichia_phage	98.8	5.4e-41
AWD95163.1|1486668_1487757_+	chromosome segregation protein SMC	NA	A0A077SLJ9	Escherichia_phage	100.0	8.0e-211
AWD95164.1|1487787_1489053_-	MFS transporter	NA	NA	NA	NA	NA
AWD95165.1|1489107_1492215_-	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
>prophage 7
CP028990	Klebsiella pneumoniae strain AR_0142 chromosome, complete genome	5275382	1933697	1990136	5275382	portal,tRNA,capsid,integrase,plate,terminase,transposase,tail	Enterobacteria_phage(51.43%)	65	1963896:1963955	1989157:1990213
AWD95564.1|1933697_1934198_+|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
AWD95565.1|1934314_1934761_+	DUF441 domain-containing protein	NA	NA	NA	NA	NA
AWD98704.1|1934744_1935536_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AWD95566.1|1935637_1936822_+	cyanate MFS transporter	NA	NA	NA	NA	NA
AWD95567.1|1936853_1937546_-	hypothetical protein	NA	NA	NA	NA	NA
AWD95568.1|1937691_1938201_+	DUF523 domain-containing protein	NA	NA	NA	NA	NA
AWD95569.1|1938187_1938544_+	DUF488 domain-containing protein	NA	NA	NA	NA	NA
AWD95570.1|1938533_1938773_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
AWD98705.1|1939037_1939289_-	hypothetical protein	NA	A0A2I8TV89	Erwinia_phage	49.2	3.4e-08
AWD95571.1|1939332_1940472_-	phage late control D family protein	NA	B9A7A9	Serratia_phage	71.3	3.2e-146
AWD95572.1|1940626_1941799_+|tail	phage tail sheath family protein	tail	A0A0A7NV69	Enterobacteria_phage	70.2	3.2e-157
AWD95573.1|1941798_1942314_+|tail	phage major tail tube protein	tail	A0A0A7NPV8	Enterobacteria_phage	61.2	3.7e-57
AWD95574.1|1942359_1942677_+|tail	phage tail protein	tail	B9A7B2	Serratia_phage	54.8	1.0e-17
AWD98706.1|1942676_1942835_+|tail	GpE family phage tail protein	tail	A0A0A7NQ96	Enterobacteria_phage	63.3	3.5e-11
AWD95575.1|1942821_1945797_+|tail	phage tail tape measure protein	tail	A0A0A7NRZ9	Enterobacteria_phage	46.8	9.5e-222
AWD98707.1|1945811_1946303_+|tail	phage tail protein	tail	A0A0A7NV65	Enterobacteria_phage	62.7	5.6e-55
AWD95576.1|1946618_1948106_+	hypothetical protein	NA	NA	NA	NA	NA
AWD95577.1|1948355_1949453_-|tail	phage tail protein	tail	A0A0M3ULH6	Salmonella_phage	29.0	1.3e-11
AWD95578.1|1949452_1949665_-	hypothetical protein	NA	NA	NA	NA	NA
AWD95579.1|1949661_1952688_-|tail	phage tail protein I	tail	D5LGZ2	Escherichia_phage	40.0	1.9e-23
AWD95580.1|1952677_1953601_-|plate	baseplate assembly protein	plate	A0A0A7NPY5	Enterobacteria_phage	43.2	2.2e-52
AWD95581.1|1953602_1953953_-|plate	baseplate assembly protein	plate	A0A0A7NQ90	Enterobacteria_phage	59.3	6.2e-24
AWD95582.1|1953949_1954537_-|plate	phage baseplate assembly protein V	plate	A0A0A7NRZ3	Enterobacteria_phage	60.0	5.9e-59
AWD95583.1|1954533_1955169_-	phage virion morphogenesis protein	NA	A0A0A7NV60	Enterobacteria_phage	51.4	2.3e-56
AWD95584.1|1955165_1955633_-|tail	phage tail protein	tail	A0A0A7NPU6	Enterobacteria_phage	58.8	2.7e-46
AWD98708.1|1955814_1956144_-	DUF2570 domain-containing protein	NA	NA	NA	NA	NA
AWD95585.1|1956155_1956701_-	lysozyme	NA	Q1I0Z1	Pasteurella_virus	43.0	6.3e-31
AWD95586.1|1956697_1956982_-|tail	phage tail protein	tail	NA	NA	NA	NA
AWD95587.1|1956972_1957173_-|tail	phage tail protein	tail	A0A0A7NV57	Enterobacteria_phage	63.1	1.6e-16
AWD95588.1|1957172_1957688_-|capsid	capsid assembly protein	capsid	A0A0A7NPU2	Enterobacteria_phage	49.4	4.1e-40
AWD95589.1|1957800_1958658_-|terminase	terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	58.6	9.8e-71
AWD95590.1|1958707_1959742_-|capsid	phage major capsid protein, P2 family	capsid	A0A0M3ULA3	Salmonella_phage	50.0	6.2e-96
AWD95591.1|1959751_1960591_-|capsid	phage capsid protein	capsid	A0A0A7NRY7	Enterobacteria_phage	66.7	2.5e-95
AWD95592.1|1960747_1962475_+	oxidoreductase	NA	A0A0A7NV54	Enterobacteria_phage	68.6	1.5e-235
AWD95593.1|1962468_1963530_+|portal	phage portal protein	portal	A0A0A7NPT9	Enterobacteria_phage	67.8	4.5e-142
AWD95594.1|1963714_1963906_+	hypothetical protein	NA	NA	NA	NA	NA
1963896:1963955	attL	GGCTTTGTTGAATAAATCAGATTTCGGGTAAGTCTCCCCCGTAGCGGGTTGTGTTTTCAG	NA	NA	NA	NA
AWD95595.1|1963951_1964875_-|transposase	IS5-like element IS903B family transposase	transposase	Q9MCT5	Escherichia_phage	99.3	1.1e-176
AWD95596.1|1965195_1966020_+	hypothetical protein	NA	NA	NA	NA	NA
AWD95597.1|1966389_1966749_-	hypothetical protein	NA	NA	NA	NA	NA
AWD95598.1|1966998_1968738_-	RNA-directed DNA polymerase	NA	NA	NA	NA	NA
AWD95599.1|1971437_1972454_-	hypothetical protein	NA	B7SYG0	Stenotrophomonas_phage	43.7	1.5e-65
AWD98709.1|1972491_1972719_-	hypothetical protein	NA	A0A286S1P6	Klebsiella_phage	39.7	1.9e-05
AWD95600.1|1972727_1973294_-	3'-5' exoribonuclease	NA	D4HTX2	Vibrio_phage	33.2	7.2e-14
AWD95601.1|1973290_1973515_-	hypothetical protein	NA	NA	NA	NA	NA
AWD95602.1|1973583_1973856_-	hypothetical protein	NA	NA	NA	NA	NA
AWD95603.1|1973871_1974249_-	hypothetical protein	NA	NA	NA	NA	NA
AWD95604.1|1974264_1974483_-	DUF4761 domain-containing protein	NA	A0A0M5M1I3	Salmonella_phage	49.1	3.6e-06
AWD95605.1|1974503_1974782_-	hypothetical protein	NA	Q1JS60	Enterobacteria_phage	88.9	6.2e-43
AWD95606.1|1974902_1975202_+	XRE family transcriptional regulator	NA	Q1JS61	Enterobacteria_phage	75.8	7.1e-37
AWD95607.1|1975317_1976331_+|integrase	integrase	integrase	Q83VS6	Escherichia_phage	79.4	2.2e-154
AWD95608.1|1976565_1977579_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.5	1.4e-12
AWD95609.1|1977636_1977738_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98710.1|1977737_1977812_+	hypothetical protein	NA	NA	NA	NA	NA
AWD95610.1|1977929_1978055_+	hypothetical protein	NA	NA	NA	NA	NA
AWD95611.1|1978114_1978378_-	DUF2534 domain-containing protein	NA	NA	NA	NA	NA
AWD95612.1|1978508_1979147_-	leucine efflux protein	NA	NA	NA	NA	NA
AWD95613.1|1979236_1980151_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.1e-72
AWD95614.1|1980366_1980558_+	hypothetical protein	NA	NA	NA	NA	NA
AWD95615.1|1980811_1981855_-	type II asparaginase	NA	NA	NA	NA	NA
AWD95616.1|1982157_1983366_+	phosphodiesterase	NA	NA	NA	NA	NA
AWD95617.1|1983439_1985224_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	36.1	5.8e-17
AWD95618.1|1985230_1986121_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AWD95619.1|1986241_1987750_+	3,4-dihydroxybenzoate decarboxylase	NA	NA	NA	NA	NA
AWD95620.1|1988060_1988747_-	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AWD95621.1|1989212_1990136_-|transposase	IS5-like element IS903B family transposase	transposase	Q9MCT5	Escherichia_phage	99.3	1.1e-176
1989157:1990213	attR	GGCTTTGTTGAATAAATCAGATTTCGGGTAAGTCTCCCCCGTAGCGGGTTGTGTTTTCAGGCAATACGCACGCTTTCAGGCATACCTGCTTTCGTCATTTTGTTCAGCGCTCGTACCAGGGCCATAGCCTCCGCAACCTGACCATCGTAGTCACGCAGTGTCAGTGAACCTCCGAACAGCTGTTTTACCCGGTACATCGCCGTTTCCGCTATCGAGCGACGGTTGTAATCTGTTGTCCATTTCCACCGCGCATTACTCCCGGTCATTCGCTGATTAGCCACTGCACGGTTACGGTCTGCATATTCACCGGGCCAGTAACCCGCACCTTTTCGGGGTGGGATAAGCGCGCTGATTTTCTTACGCCGCAGTTCATCGTGACAGAGCCGGGTGTCGTAAGCGCCGTCTGCCGATGCTGCCCTGATTTTTCTGTGAGTCTGCCGGATAAGACCCGGGAAGGCTTCTGAGTCCGTCACATTGTTCAGCGACAGGTCAGCGCAGATGATTTCATGTGTTTTACTGTCAACGGCGAGATGCAGCTTACGCCAGATACGGCGGCGTTCCTGGCCATGCTTTTTGACTTTCCACTCGCCTTCACCGAAGACCTTCAGCCCGGTGGAATCAATTACCAGGTGTGCGATTTCACCCCGGGTGGGCGTTTTGAAACTGACATTAACCGACTTTGCCCGCCTGCTGACACAGCTGTAATCCGGGCAGCGTAGCGGAACGTTCATCAGAGAAAAAATGGAATCAATAAAGCCCTGCGCAGCGCGCAGGGTCAGCCTGAATACGCGTTTAATGACCAGCACAGTCGTGATGGCAAGGTCAGAATAGCGCTGAGGTCTGCCTCGTGAAGAAGGTGTTGCTGACTCATACCAGGCCTGAATAGCTTCATCATCCAGCCAGAAAGTTATGGAGCCACGGTTGATGAGGGCTTTATTGTAGGTGGGCCAGTTGGTGATTTTGAACTTTTGCTTTGCCACGGAACGGTCTGCGTTGTCGGGAAGATGCGTGATCTGATCCTTCAACTCAGCAAAAGTTCGATTTATTCAACAAAGCC	NA	NA	NA	NA
>prophage 8
CP028990	Klebsiella pneumoniae strain AR_0142 chromosome, complete genome	5275382	2241337	2250800	5275382	tRNA,protease	Bacillus_phage(16.67%)	9	NA	NA
AWD95845.1|2241337_2243059_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	W8CYL7	Bacillus_phage	22.6	1.2e-14
AWD95846.1|2243103_2243805_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
AWD95847.1|2244158_2244377_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
AWD95848.1|2244496_2246776_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
AWD95849.1|2246806_2247124_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
AWD95850.1|2247449_2247671_+	cold shock domain protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
AWD95851.1|2247604_2247808_-	hypothetical protein	NA	NA	NA	NA	NA
AWD95852.1|2247747_2249688_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
AWD95853.1|2249684_2250800_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
>prophage 9
CP028990	Klebsiella pneumoniae strain AR_0142 chromosome, complete genome	5275382	2701863	2776083	5275382	portal,tRNA,capsid,integrase,plate,head,holin,terminase,transposase,tail	Enterobacteria_phage(20.0%)	90	2723604:2723650	2768455:2768501
AWD96247.1|2701863_2703381_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.3	9.5e-85
AWD96248.1|2703712_2705188_-	MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	29.0	6.9e-48
AWD96249.1|2705247_2707395_-	lysine decarboxylase CadA	NA	NA	NA	NA	NA
AWD96250.1|2707477_2708812_-	lysine:cadaverine antiporter	NA	NA	NA	NA	NA
AWD96251.1|2709177_2710746_-	transcriptional regulator CadC	NA	NA	NA	NA	NA
AWD96252.1|2711038_2711311_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
AWD96253.1|2711411_2712332_-	lipid A biosynthesis lauroyl acyltransferase	NA	A0A1W6JP29	Morganella_phage	40.1	5.4e-51
AWD96254.1|2712842_2713709_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AWD96255.1|2713731_2714757_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
AWD96256.1|2714758_2717194_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
AWD96257.1|2717204_2717900_-	fimbrial chaperone	NA	NA	NA	NA	NA
AWD96258.1|2717958_2718519_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
AWD96259.1|2718990_2719653_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AWD96260.1|2719630_2719936_+	hypothetical protein	NA	NA	NA	NA	NA
AWD96261.1|2719988_2721293_-	citrate synthase	NA	NA	NA	NA	NA
AWD96262.1|2721522_2721705_+	hypothetical protein	NA	NA	NA	NA	NA
AWD96263.1|2721803_2721974_+	ATP-NAD kinase	NA	NA	NA	NA	NA
AWD96264.1|2722052_2722454_-	hydroxyisourate hydrolase	NA	NA	NA	NA	NA
AWD96265.1|2722849_2723143_-	hypothetical protein	NA	NA	NA	NA	NA
2723604:2723650	attL	AATGGCACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAG	NA	NA	NA	NA
AWD96266.1|2723805_2724012_-	hypothetical protein	NA	K7PGV5	Enterobacterial_phage	47.7	1.6e-08
AWD96267.1|2725354_2726200_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AWD96268.1|2726201_2728145_+	glycosyl transferase	NA	NA	NA	NA	NA
AWD98748.1|2728562_2728877_-|tail	tail fiber assembly protein	tail	A0A218M4J2	Erwinia_phage	48.4	4.4e-13
AWD96269.1|2729560_2730592_-|transposase	IS630-like element ISEc33 family transposase	transposase	NA	NA	NA	NA
AWD96270.1|2730907_2731504_-	DUF2313 domain-containing protein	NA	A0A2P9JZK7	Alteromonadaceae_phage	36.4	3.6e-32
AWD96271.1|2731500_2732649_-|plate	phage baseplate protein	plate	B6SBU6	Clostridium_virus	26.1	1.7e-09
AWD96272.1|2732638_2733088_-	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	39.7	2.3e-15
AWD96273.1|2733084_2733666_-|plate	baseplate assembly protein	plate	NA	NA	NA	NA
AWD96274.1|2733662_2734748_-|tail	phage tail protein	tail	Q8SBG7	Shigella_phage	30.6	1.5e-39
AWD96275.1|2734744_2736145_-	hypothetical protein	NA	A0A2P9JZK2	Alteromonadaceae_phage	39.1	4.0e-05
AWD96276.1|2736191_2738045_-	hypothetical protein	NA	A0A172JGI1	Citrobacter_phage	45.3	1.8e-21
AWD96277.1|2738186_2738465_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
AWD96278.1|2738466_2738838_-|tail	phage tail protein	tail	NA	NA	NA	NA
AWD96279.1|2738841_2740353_-|tail	phage tail protein	tail	B5TK67	Pseudomonas_phage	44.4	1.2e-103
AWD96280.1|2740357_2740534_-	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
AWD96281.1|2740536_2741082_-	ATP-binding protein	NA	NA	NA	NA	NA
AWD96282.1|2741078_2741438_-	hypothetical protein	NA	NA	NA	NA	NA
AWD96283.1|2741442_2741823_-	hypothetical protein	NA	NA	NA	NA	NA
AWD96284.1|2741824_2742874_-|capsid	major capsid protein	capsid	V5Q8G6	Xylella_phage	33.7	8.1e-51
AWD96285.1|2742972_2743380_-|head	head decoration protein	head	NA	NA	NA	NA
AWD96286.1|2743379_2743970_-	hypothetical protein	NA	NA	NA	NA	NA
AWD96287.1|2743971_2744838_-	S49 family peptidase	NA	A0A248XD65	Klebsiella_phage	48.1	1.1e-48
AWD96288.1|2744834_2746469_-|portal	phage portal protein	portal	A0A291AUL8	Sinorhizobium_phage	35.5	1.4e-89
AWD96289.1|2746468_2746732_-|head,tail	phage head-tail adapter protein	head,tail	NA	NA	NA	NA
AWD96290.1|2746740_2748867_-|terminase	terminase	terminase	A0A0C5ABH4	Bacteriophage	34.5	6.1e-98
AWD96291.1|2748808_2749390_-	hypothetical protein	NA	NA	NA	NA	NA
AWD96292.1|2749651_2750290_-	hypothetical protein	NA	NA	NA	NA	NA
AWD96293.1|2750385_2750592_-	hypothetical protein	NA	NA	NA	NA	NA
AWD96294.1|2750825_2751215_-	DUF2570 domain-containing protein	NA	A0A192Y6H8	Salmonella_phage	50.0	1.1e-24
AWD98749.1|2751211_2751709_-	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	84.2	2.5e-79
AWD96295.1|2751686_2751956_-|holin	holin	holin	K7P6H9	Enterobacteria_phage	77.2	7.4e-33
AWD96296.1|2752499_2753183_-	antiterminator	NA	I6PDF8	Cronobacter_phage	52.8	3.4e-58
AWD96297.1|2753179_2753320_-	YlcG family protein	NA	NA	NA	NA	NA
AWD96298.1|2753316_2753955_-	hypothetical protein	NA	H6WRY9	Salmonella_phage	68.4	9.2e-74
AWD96299.1|2753947_2754616_-	serine/threonine protein phosphatase	NA	K7P6H8	Enterobacteria_phage	80.1	2.5e-106
AWD96300.1|2754612_2754780_-	NinE family protein	NA	K7P7K0	Enterobacteria_phage	62.5	3.5e-09
AWD96301.1|2754760_2755228_-	recombination protein NinB	NA	Q8VNP6	Enterobacteria_phage	46.5	3.4e-33
AWD96302.1|2755509_2755731_-	hypothetical protein	NA	NA	NA	NA	NA
AWD96303.1|2755911_2756760_-	DUF551 domain-containing protein	NA	A0A248SKW5	Klebsiella_phage	93.4	2.7e-49
AWD96304.1|2756756_2757137_-	HNH endonuclease	NA	K7P7B7	Enterobacteria_phage	94.2	1.6e-62
AWD96305.1|2757136_2757970_-	hypothetical protein	NA	A0A075B8K3	Enterobacteria_phage	43.9	1.1e-26
AWD96306.1|2757966_2758173_-	hypothetical protein	NA	R9TRD3	Aeromonas_phage	97.1	1.1e-31
AWD96307.1|2758169_2758571_-	hypothetical protein	NA	R9TME7	Aeromonas_phage	31.9	6.7e-06
AWD96308.1|2758567_2758870_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AWD96309.1|2758866_2759715_-	ATP-binding protein	NA	K7PLU3	Enterobacteria_phage	60.8	1.2e-89
AWD96310.1|2760878_2761199_-	hypothetical protein	NA	A0A0M4RU01	Salmonella_phage	67.9	6.5e-36
AWD96311.1|2761248_2761464_-	XRE family transcriptional regulator	NA	Q716D6	Shigella_phage	60.9	5.5e-15
AWD96312.1|2761563_2762196_+	helix-turn-helix domain-containing protein	NA	A0A1I9KG86	Aeromonas_phage	39.5	2.0e-33
AWD96313.1|2762632_2762839_+	cell division inhibitor protein	NA	A0A0M4S6W3	Salmonella_phage	94.1	1.4e-31
AWD96314.1|2762920_2763205_+	host nuclease inhibitor GamL	NA	G8C7T1	Escherichia_phage	78.7	9.5e-39
AWD96315.1|2763221_2763968_+	phage recombination protein Bet	NA	A0A1I9LJN0	Stx_converting_phage	67.2	7.0e-65
AWD96316.1|2763964_2764588_+	exonuclease	NA	A0A0S2SY31	Pseudomonas_phage	60.2	3.1e-58
AWD96317.1|2764616_2765144_+	phage N-6-adenine-methyltransferase	NA	Q9ZWX6	Enterobacteria_phage	61.6	1.1e-56
AWD96318.1|2765357_2765702_+	hypothetical protein	NA	NA	NA	NA	NA
AWD96319.1|2765694_2766372_+	morphogenetic protein	NA	H2BDG4	Pseudomonas_virus	47.4	1.7e-49
AWD96320.1|2766368_2766596_+	hypothetical protein	NA	S4TRP7	Salmonella_phage	43.2	1.8e-08
AWD96321.1|2766592_2766814_+	conjugal transfer protein TraR	NA	A0A0K2FI84	Escherichia_phage	52.2	2.0e-12
AWD96322.1|2766813_2767053_+	DUF4222 domain-containing protein	NA	Q6H9Z8	Enterobacteria_phage	43.6	7.8e-10
AWD98750.1|2767065_2767401_+	DNA-binding protein	NA	NA	NA	NA	NA
AWD98751.1|2767397_2768441_+|integrase	site-specific integrase	integrase	G8C7S0	Escherichia_phage	85.6	5.0e-178
AWD96323.1|2768871_2769738_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	34.8	1.3e-30
2768455:2768501	attR	AATGGCACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAG	NA	NA	NA	NA
AWD96324.1|2769739_2769952_+	ribosome-associated protein	NA	NA	NA	NA	NA
AWD96325.1|2769997_2771383_-|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	35.4	3.5e-46
AWD96326.1|2771558_2772053_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AWD96327.1|2772056_2772779_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
AWD96328.1|2772886_2773225_+	hypothetical protein	NA	NA	NA	NA	NA
AWD96329.1|2773221_2773389_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AWD96330.1|2773321_2773831_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA	NA
AWD96331.1|2773827_2774895_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AWD96332.1|2775006_2776083_+|tRNA	tRNA 2-selenouridine(34) synthase MnmH	tRNA	NA	NA	NA	NA
>prophage 10
CP028990	Klebsiella pneumoniae strain AR_0142 chromosome, complete genome	5275382	2780582	2845723	5275382	tRNA,protease,transposase	Escherichia_phage(28.57%)	59	NA	NA
AWD98753.1|2780582_2781209_+|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	protease	NA	NA	NA	NA
AWD96335.1|2781237_2782008_+	oxidoreductase	NA	NA	NA	NA	NA
AWD96336.1|2782066_2782921_+	co-chaperone YbbN	NA	NA	NA	NA	NA
AWD96337.1|2783028_2783811_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
AWD96338.1|2783797_2784475_-	iron ABC transporter ATP-binding protein FetA	NA	G3M9Y6	Bacillus_virus	33.0	1.3e-22
AWD96339.1|2784615_2785533_+	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA	NA
AWD96340.1|2785529_2785988_+	NfeD family protein	NA	NA	NA	NA	NA
AWD96341.1|2785984_2786395_-	HTH-type transcriptional regulator CueR	NA	NA	NA	NA	NA
AWD98754.1|2786501_2789003_+	copper-exporting P-type ATPase CopA	NA	A0A218MNH6	uncultured_virus	38.0	4.7e-113
AWD96342.1|2789134_2789929_+	conjugal transfer protein TraB	NA	NA	NA	NA	NA
AWD96343.1|2790131_2790611_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AWD96344.1|2790716_2792369_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA	NA
AWD96345.1|2792638_2793859_+	MFS transporter	NA	NA	NA	NA	NA
AWD96346.1|2794084_2795761_+	Kef family K(+) transporter	NA	NA	NA	NA	NA
AWD96347.1|2795796_2797101_-	inosine/guanosine kinase	NA	NA	NA	NA	NA
AWD96348.1|2797164_2798127_-	ferrochelatase	NA	NA	NA	NA	NA
AWD96349.1|2798255_2798900_-	adenylate kinase	NA	NA	NA	NA	NA
AWD96350.1|2799122_2800997_-	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.8	4.9e-115
AWD96351.1|2801108_2801714_-	recombination protein RecR	NA	NA	NA	NA	NA
AWD96352.1|2801713_2802046_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
AWD96353.1|2802103_2804011_-	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	38.2	3.0e-43
AWD96354.1|2804103_2804655_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	44.5	3.9e-28
AWD96355.1|2804805_2805183_-	DUF454 domain-containing protein	NA	NA	NA	NA	NA
AWD96356.1|2805252_2805780_+	primosomal replication protein N''	NA	NA	NA	NA	NA
AWD96357.1|2805792_2805966_+	DUF2496 domain-containing protein	NA	NA	NA	NA	NA
AWD96358.1|2806033_2806933_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	51.2	1.6e-63
AWD96359.1|2806968_2810316_-	mechanosensitive channel MscK	NA	NA	NA	NA	NA
AWD96360.1|2810445_2811096_-	DNA-binding transcriptional repressor AcrR	NA	NA	NA	NA	NA
AWD96361.1|2811238_2812432_+	MexE family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AWD96362.1|2812454_2815601_+	multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	22.7	1.1e-47
AWD96363.1|2816086_2816461_+	Hha toxicity attenuator	NA	NA	NA	NA	NA
AWD96364.1|2816487_2816706_+	transcriptional regulator	NA	NA	NA	NA	NA
AWD96365.1|2816864_2817431_+	maltose O-acetyltransferase	NA	NA	NA	NA	NA
AWD96366.1|2817563_2818034_+	hypothetical protein	NA	NA	NA	NA	NA
AWD96367.1|2818008_2819460_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.1	4.6e-12
AWD96368.1|2819560_2820259_+	N-acetyltransferase	NA	NA	NA	NA	NA
AWD96369.1|2820255_2820396_-	50S ribosomal protein L36	NA	NA	NA	NA	NA
AWD96370.1|2820395_2820659_-	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
AWD96371.1|2820774_2821845_-	lac repressor	NA	C6ZCU4	Enterobacteria_phage	42.8	6.1e-70
AWD96372.1|2822115_2823387_+	maltoporin	NA	NA	NA	NA	NA
AWD96373.1|2823523_2823838_-	PTS sugar transporter	NA	NA	NA	NA	NA
AWD96374.1|2823902_2825960_-	beta-galactosidase	NA	NA	NA	NA	NA
AWD96375.1|2825991_2827194_-	galactosidase	NA	NA	NA	NA	NA
AWD96376.1|2827198_2828050_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AWD96377.1|2828060_2829368_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AWD96378.1|2829430_2830663_-	cyclodextrin-binding protein	NA	NA	NA	NA	NA
AWD96379.1|2831019_2832129_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.0	2.5e-26
AWD96380.1|2832362_2833922_+	EAL domain-containing protein	NA	NA	NA	NA	NA
AWD98755.1|2833956_2834229_-	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA	NA
AWD96381.1|2834393_2835257_+	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA	NA
AWD96382.1|2835301_2835898_-	hypothetical protein	NA	NA	NA	NA	NA
AWD96383.1|2835941_2836865_-|transposase	IS5-like element IS903B family transposase	transposase	Q9MCT5	Escherichia_phage	99.3	1.1e-176
AWD96384.1|2837204_2838230_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AWD96385.1|2839858_2840074_-	hypothetical protein	NA	NA	NA	NA	NA
AWD96386.1|2840070_2840328_-	hypothetical protein	NA	NA	NA	NA	NA
AWD96387.1|2841236_2842262_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AWD96388.1|2842601_2843525_+|transposase	IS5-like element IS903B family transposase	transposase	Q9MCT5	Escherichia_phage	99.3	1.1e-176
AWD96389.1|2843826_2844750_+|transposase	IS5/IS1182 family transposase	transposase	Q9MCT5	Escherichia_phage	99.0	9.2e-176
AWD96390.1|2844793_2845723_+|transposase	IS5/IS1182 family transposase	transposase	Q9MCT5	Escherichia_phage	98.7	3.5e-175
>prophage 11
CP028990	Klebsiella pneumoniae strain AR_0142 chromosome, complete genome	5275382	5008531	5048290	5275382	tRNA,transposase,integrase	Bacillus_phage(22.22%)	40	5022192:5022206	5046025:5046039
AWD98363.1|5008531_5009341_+|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	31.7	9.4e-15
AWD98364.1|5009471_5009909_-	cysteine desulfurase sulfur acceptor subunit CsdE	NA	NA	NA	NA	NA
AWD98365.1|5009908_5011114_-	cysteine desulfurase CsdA	NA	Q2XUY6	environmental_halophage	36.8	8.9e-70
AWD98839.1|5011311_5011536_+	YgdI/YgdR family lipoprotein	NA	NA	NA	NA	NA
AWD98366.1|5011887_5012805_+	transcriptional regulator GcvA	NA	NA	NA	NA	NA
AWD98367.1|5012824_5013220_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98368.1|5013212_5014313_+	23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM	NA	NA	NA	NA	NA
AWD98369.1|5014367_5015078_-	HTH domain-containing protein	NA	NA	NA	NA	NA
AWD98370.1|5015136_5015559_-	L-fucose mutarotase	NA	NA	NA	NA	NA
AWD98371.1|5015560_5016979_-	L-fuculokinase	NA	NA	NA	NA	NA
AWD98372.1|5017086_5018862_-	L-fucose isomerase	NA	NA	NA	NA	NA
AWD98373.1|5018894_5020205_-	L-fucose:H+ symporter permease	NA	NA	NA	NA	NA
AWD98374.1|5020771_5021419_+	L-fuculose-phosphate aldolase	NA	NA	NA	NA	NA
AWD98375.1|5021446_5022595_+	lactaldehyde reductase	NA	NA	NA	NA	NA
5022192:5022206	attL	CGGGGATGGGATTTT	NA	NA	NA	NA
AWD98376.1|5022642_5023398_-	flap endonuclease Xni	NA	F8WQ40	Bacillus_phage	33.6	1.3e-10
AWD98377.1|5023494_5025438_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AWD98378.1|5025710_5026883_+	alkanesulfonate monooxygenase, FMNH(2)-dependent	NA	NA	NA	NA	NA
AWD98379.1|5026929_5028327_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AWD98380.1|5028400_5029807_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
AWD98381.1|5029803_5030826_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.6	5.7e-25
AWD98382.1|5030822_5031521_+	ABC transporter permease	NA	NA	NA	NA	NA
AWD98383.1|5031517_5032396_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AWD98384.1|5033101_5034364_+|transposase	IS1380 family transposase ISEc9	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
AWD98385.1|5034619_5035495_+	class A extended-spectrum beta-lactamase CTX-M-15	NA	A0A1B0VBP7	Salmonella_phage	82.4	1.1e-125
AWD98386.1|5035541_5035916_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA	NA
AWD98387.1|5035922_5037293_-|transposase	IS1182 family transposase ISCfr1	transposase	NA	NA	NA	NA
AWD98388.1|5037407_5038544_-	DUF3883 domain-containing protein	NA	NA	NA	NA	NA
AWD98389.1|5038594_5038840_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98390.1|5038845_5039037_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98391.1|5039518_5040061_-	tunicamycin resistance protein	NA	NA	NA	NA	NA
AWD98392.1|5040073_5040934_-	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA	NA
AWD98393.1|5041166_5041871_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AWD98394.1|5041904_5042207_-|transposase	transposase	transposase	NA	NA	NA	NA
AWD98395.1|5042145_5043159_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
AWD98396.1|5043303_5043801_+	trimethoprim-resistant dihydrofolate reductase DfrA12	NA	A0A0A0PL85	Bacillus_phage	40.9	7.5e-23
AWD98397.1|5043912_5044203_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98398.1|5044208_5045000_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
AWD98399.1|5045163_5045511_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
AWD98400.1|5045504_5046344_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA	NA
5046025:5046039	attR	CGGGGATGGGATTTT	NA	NA	NA	NA
AWD98401.1|5046748_5048290_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
>prophage 1
CP028991	Klebsiella pneumoniae strain AR_0142 plasmid unnamed1, complete sequence	85698	0	6440	85698		Enterobacteria_phage(66.67%)	6	NA	NA
AWD98847.1|975_2181_+	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	89.0	7.3e-205
AWD98848.1|2177_3152_+	ParB/RepB/Spo0J family partition protein	NA	Q1MVJ4	Enterobacteria_phage	62.3	1.4e-105
AWD98849.1|3323_3509_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98850.1|3528_3861_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98851.1|4085_4301_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98852.1|4412_6440_+	SAM-dependent DNA methyltransferase	NA	A0A220A2U5	Liberibacter_phage	26.6	2.1e-26
>prophage 2
CP028991	Klebsiella pneumoniae strain AR_0142 plasmid unnamed1, complete sequence	85698	11015	58726	85698	transposase,integrase,protease	Escherichia_phage(36.0%)	50	37309:37353	62651:62695
AWD98855.1|11015_12284_+|transposase	ISL3 family transposase ISKpn25	transposase	Q6V7R1	Burkholderia_virus	34.7	5.2e-60
AWD98856.1|12403_12877_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
AWD98857.1|13041_13236_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98858.1|14090_14873_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	90.2	4.6e-51
AWD98859.1|14872_15205_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98860.1|15211_15568_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98861.1|15635_15965_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98862.1|15992_16301_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98863.1|16346_16553_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98864.1|17217_17448_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
AWD98865.1|17444_17861_+	PIN domain-containing protein	NA	NA	NA	NA	NA
AWD98866.1|19437_20715_+	colicin V secretion protein CvaA	NA	NA	NA	NA	NA
AWD98867.1|20704_22813_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	27.3	2.4e-38
AWD98868.1|22812_23448_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AWD98869.1|23555_23900_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98870.1|24093_24363_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98871.1|24466_24730_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98872.1|24911_25616_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AWD98873.1|25769_26585_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	A0A0B5J4J5	Pandoravirus	27.0	4.5e-09
AWD98874.1|26914_27091_+	DUF4102 domain-containing protein	NA	T1S9J3	Salmonella_phage	68.6	1.0e-06
AWD98875.1|27272_28277_-|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
AWD98876.1|30707_31412_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AWD98877.1|31652_32357_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AWD98878.1|32535_33300_+|transposase	IS6 family transposase IS6100	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
AWD98879.1|33341_33554_+	resolvase	NA	NA	NA	NA	NA
AWD98880.1|33566_34775_+	restriction endonuclease	NA	E5E3X4	Burkholderia_phage	42.5	1.2e-34
AWD98881.1|34808_36242_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	50.6	7.0e-106
AWD98882.1|36623_36830_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98883.1|36834_37347_-	restriction endonuclease	NA	NA	NA	NA	NA
37309:37353	attL	GGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTT	NA	NA	NA	NA
AWD98884.1|38148_38853_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AWD98885.1|38950_40070_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	43.2	6.0e-52
AWD98886.1|40117_40756_+	DUF4113 domain-containing protein	NA	F1C5A5	Cronobacter_phage	65.5	8.3e-75
AWD98887.1|41167_42043_+	replication initiation protein	NA	Q71TL8	Escherichia_phage	56.4	5.6e-82
AWD98934.1|42667_43294_+	cobyrinic acid ac-diamide synthase	NA	E5FFJ3	Burkholderia_phage	30.1	3.8e-16
AWD98888.1|43413_43593_+	Par-like protein	NA	NA	NA	NA	NA
AWD98889.1|43953_44142_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98890.1|44725_45163_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98891.1|45456_46980_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	31.8	3.7e-44
AWD98892.1|47521_48598_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AWD98893.1|49310_50015_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	9.9e-138
AWD98935.1|50158_50713_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA	NA
AWD98894.1|50904_51609_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AWD98895.1|51754_52045_-	alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	40.6	4.8e-06
AWD98896.1|52616_53321_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AWD98897.1|53408_53675_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
AWD98898.1|53895_54369_-	trimethoprim-resistant dihydrofolate reductase DfrA14	NA	G3MBI7	Bacillus_virus	28.9	8.4e-16
AWD98899.1|54524_55538_+|integrase	integron integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
AWD98900.1|55476_55791_+|transposase	transposase	transposase	NA	NA	NA	NA
AWD98901.1|55930_56500_+	recombinase family protein	NA	E5FFF9	Burkholderia_phage	43.2	5.2e-36
AWD98902.1|57256_58726_+	HNH endonuclease	NA	G0X580	Salmonella_phage	51.3	5.5e-21
62651:62695	attR	GGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTT	NA	NA	NA	NA
>prophage 3
CP028991	Klebsiella pneumoniae strain AR_0142 plasmid unnamed1, complete sequence	85698	62713	73103	85698	transposase	Escherichia_phage(20.0%)	11	NA	NA
AWD98906.1|62713_63418_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	9.9e-138
AWD98907.1|63363_63624_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98908.1|64169_64556_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98909.1|64564_64705_+	plasmid stabilization protein	NA	NA	NA	NA	NA
AWD98910.1|64837_67855_+|transposase	Tn3-like element IS3000 family transposase	transposase	A0A125RQ78	Bacillus_phage	24.7	5.5e-52
AWD98911.1|68351_68783_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
AWD98912.1|68828_70838_-	hypothetical protein	NA	G8DH78	Emiliania_huxleyi_virus	27.4	1.5e-24
AWD98913.1|70906_71149_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
AWD98914.1|71196_71709_-	single-stranded DNA-binding protein	NA	A0A0A0P1Q9	Enterobacteria_phage	84.7	8.5e-54
AWD98936.1|71946_72207_+	hypothetical protein	NA	NA	NA	NA	NA
AWD98915.1|72539_73103_-	SAM-dependent methyltransferase	NA	M4M9L8	Vibrio_phage	42.0	1.7e-18
>prophage 4
CP028991	Klebsiella pneumoniae strain AR_0142 plasmid unnamed1, complete sequence	85698	76242	85055	85698		Pectobacterium_phage(16.67%)	13	NA	NA
AWD98921.1|76242_76497_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	48.8	4.0e-12
AWD98922.1|76684_76876_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98923.1|76918_77425_-	antirestriction protein	NA	G9FHQ1	Rhodococcus_virus	31.4	4.1e-08
AWD98924.1|77467_77896_-	antirestriction protein	NA	NA	NA	NA	NA
AWD98925.1|78575_79343_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98926.1|79396_79816_-	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AWD98927.1|79825_80047_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98928.1|80046_80748_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.7	7.1e-27
AWD98929.1|81184_81415_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98930.1|81475_82147_-	Mediator of plasmid stability	NA	NA	NA	NA	NA
AWD98931.1|82149_83121_-	StbA family protein	NA	A0A222YXF2	Escherichia_phage	46.8	1.1e-73
AWD98932.1|83352_83784_+	peptidase	NA	A0A1W6JNS2	Morganella_phage	52.5	1.0e-28
AWD98933.1|83783_85055_+	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.7	3.6e-154
>prophage 1
CP028992	Klebsiella pneumoniae strain AR_0142 plasmid unnamed2, complete sequence	68953	8763	64426	68953	tail,head,capsid,terminase,portal	Klebsiella_phage(86.54%)	55	NA	NA
AWD98943.1|8763_9555_+	hypothetical protein	NA	O64341	Escherichia_phage	88.9	2.0e-134
AWD98944.1|11911_13834_+	protelomerase	NA	Q6UAV6	Klebsiella_phage	95.0	0.0e+00
AWD98945.1|13888_14680_-	hypothetical protein	NA	O64341	Escherichia_phage	88.9	2.0e-134
AWD98946.1|14676_14907_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98947.1|14903_15068_-	host cell division inhibitor Icd-like protein	NA	Q6UAV3	Klebsiella_phage	96.3	2.8e-19
AWD98948.1|15427_15811_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98949.1|15800_16373_-	hypothetical protein	NA	Q6UAU9	Klebsiella_phage	89.7	5.5e-86
AWD98950.1|16490_16787_-	hypothetical protein	NA	NA	NA	NA	NA
AWD98951.1|16779_20784_-	origin of replication binding family protein	NA	A0A2I6TD01	Escherichia_phage	81.3	0.0e+00
AWD98952.1|21034_21643_-	XRE family transcriptional regulator	NA	Q6UAU6	Klebsiella_phage	92.1	3.6e-104
AWD98997.1|21723_21933_+	hypothetical protein	NA	Q6UAU5	Klebsiella_phage	92.8	7.7e-30
AWD98953.1|21922_22660_+	phage antitermination protein	NA	Q6UAU4	Klebsiella_phage	84.5	2.2e-119
AWD98954.1|22640_22862_+	hypothetical protein	NA	A0A2I6TCB2	Escherichia_phage	75.3	1.1e-29
AWD98955.1|23071_23680_+	3'-5' exonuclease	NA	Q6UAU3	Klebsiella_phage	88.5	1.7e-98
AWD98956.1|24280_24526_+	hypothetical protein	NA	G8C7U9	Escherichia_phage	83.1	5.1e-25
AWD98957.1|24518_24845_+	hypothetical protein	NA	Q6UAT7	Klebsiella_phage	94.4	3.9e-52
AWD98958.1|24865_25093_+	hypothetical protein	NA	O64355	Escherichia_phage	80.3	2.8e-25
AWD98959.1|25196_25400_+	hypothetical protein	NA	Q6UAT5	Klebsiella_phage	76.6	3.5e-19
AWD98960.1|25489_25777_-	XRE family transcriptional regulator	NA	Q6UAT4	Klebsiella_phage	96.8	1.7e-43
AWD98961.1|25776_26085_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	Q6UAT3	Klebsiella_phage	94.2	3.9e-46
AWD98998.1|26255_26477_+	hypothetical protein	NA	O64358	Escherichia_phage	90.4	3.0e-32
AWD98962.1|26488_26716_+	hypothetical protein	NA	Q6UAT1	Klebsiella_phage	84.0	1.6e-28
AWD98963.1|26986_28048_+	site-specific DNA-methyltransferase	NA	Q6UAT0	Klebsiella_phage	93.2	1.6e-171
AWD98964.1|28106_28418_+	hypothetical protein	NA	Q6UAS9	Klebsiella_phage	88.1	1.8e-43
AWD98965.1|28414_28906_+	hypothetical protein	NA	Q6UAS8	Klebsiella_phage	90.8	1.9e-82
AWD98966.1|28922_29399_+	hypothetical protein	NA	Q6UAS7	Klebsiella_phage	79.7	1.7e-61
AWD98967.1|29652_29952_+	DUF4406 domain-containing protein	NA	Q6UAS4	Klebsiella_phage	96.0	3.0e-51
AWD98968.1|30121_31198_+	hypothetical protein	NA	Q6UAS3	Klebsiella_phage	37.4	9.8e-36
AWD98969.1|31181_31544_+	HNH endonuclease	NA	Q6UAS2	Klebsiella_phage	92.5	7.8e-62
AWD98970.1|31540_31825_+	hypothetical protein	NA	Q6UAS1	Klebsiella_phage	37.5	2.4e-05
AWD98971.1|31821_32253_+	hypothetical protein	NA	Q6UAS0	Klebsiella_phage	59.9	2.9e-39
AWD98999.1|32338_32539_+	hypothetical protein	NA	Q6UAR8	Klebsiella_phage	89.4	2.9e-10
AWD98972.1|32755_33190_+|terminase	terminase	terminase	Q6UAY1	Klebsiella_phage	95.1	5.3e-73
AWD98973.1|33224_34934_+|terminase	terminase large subunit	terminase	Q6UAY0	Klebsiella_phage	95.1	0.0e+00
AWD98974.1|34927_35107_+	hypothetical protein	NA	Q6UAX9	Klebsiella_phage	78.9	9.2e-16
AWD98975.1|35106_36366_+|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	90.0	2.8e-223
AWD98976.1|36402_37323_+	S49 family peptidase	NA	Q6UAX7	Klebsiella_phage	87.9	2.8e-148
AWD98977.1|37400_38687_+|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	84.3	2.0e-205
AWD99000.1|38943_39141_+	hypothetical protein	NA	Q6UAX5	Klebsiella_phage	78.0	1.8e-20
AWD98978.1|39121_39439_+|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6UAX4	Klebsiella_phage	89.8	1.5e-45
AWD98979.1|39435_39774_+|head,tail	head-tail adaptor protein	head,tail	Q6UAX3	Klebsiella_phage	91.1	5.6e-54
AWD98980.1|39754_40144_+	hypothetical protein	NA	Q6UAX2	Klebsiella_phage	86.0	9.6e-58
AWD98981.1|40140_40542_+	hypothetical protein	NA	Q6UAX1	Klebsiella_phage	94.0	1.7e-62
AWD98982.1|40573_41035_+|tail	phage tail protein	tail	Q6UAX0	Klebsiella_phage	83.7	7.8e-67
AWD98983.1|41091_41457_+|tail	phage tail protein	tail	Q6UAW8	Klebsiella_phage	88.5	8.1e-51
AWD98984.1|41477_41690_+	hypothetical protein	NA	Q6UAW9	Klebsiella_phage	90.3	5.8e-33
AWD98985.1|41689_45070_+|tail	phage tail tape measure protein	tail	Q6UAW7	Klebsiella_phage	71.6	0.0e+00
AWD98986.1|45069_45408_+|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	88.4	2.4e-57
AWD98987.1|45404_46160_+|tail	phage minor tail protein L	tail	Q6UAW5	Klebsiella_phage	80.1	6.7e-124
AWD98988.1|46161_46872_+	peptidase P60	NA	Q6UAW4	Klebsiella_phage	90.3	6.5e-137
AWD98989.1|47269_47881_+|tail	tail assembly protein	tail	Q6UAW2	Klebsiella_phage	72.5	5.3e-71
AWD98990.1|47943_60648_+	hypothetical protein	NA	Q6UAW1	Klebsiella_phage	47.9	0.0e+00
AWD98991.1|60716_62216_+|tail	phage tail protein	tail	A0A0P0IDN1	Klebsiella_phage	73.1	1.9e-146
AWD98992.1|62294_63260_-	ParB/RepB/Spo0J family partition protein	NA	Q6UAV8	Klebsiella_phage	86.9	1.5e-155
AWD98993.1|63262_64426_-	plasmid-partitioning protein SopA	NA	Q6UAV7	Klebsiella_phage	98.4	2.1e-225
>prophage 1
CP028993	Klebsiella pneumoniae strain AR_0142 plasmid unnamed3, complete sequence	49476	27833	40362	49476	integrase	Escherichia_phage(33.33%)	15	22974:23033	46474:47294
22974:23033	attL	GGGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTTGCTGATGGAGCT	NA	NA	NA	NA
AWD99022.1|27833_28361_+	phospholipase D family protein	NA	A0A1B2LRT6	Wolbachia_phage	39.5	5.7e-21
AWD99023.1|28393_28825_-	hypothetical protein	NA	NA	NA	NA	NA
AWD99024.1|29304_30270_-	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	42.7	1.6e-58
AWD99025.1|30477_30747_-	hypothetical protein	NA	NA	NA	NA	NA
AWD99026.1|30739_32224_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AWD99027.1|32223_32475_-	hypothetical protein	NA	NA	NA	NA	NA
AWD99028.1|32632_33064_+	peptidase	NA	A0A1W6JNS2	Morganella_phage	53.3	1.6e-29
AWD99029.1|33063_34335_+	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.3	4.9e-151
AWD99030.1|34416_35394_-	ParB/RepB/Spo0J family partition protein	NA	Q38420	Escherichia_phage	54.4	2.6e-88
AWD99031.1|35390_36596_-	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.6	2.4e-163
AWD99032.1|37010_37280_+	hypothetical protein	NA	NA	NA	NA	NA
AWD99033.1|37312_37510_-	hypothetical protein	NA	NA	NA	NA	NA
AWD99034.1|37636_38503_-	RepB family plasmid replication initiator protein	NA	A0A222YYK1	Escherichia_phage	31.1	1.5e-23
AWD99035.1|39270_39528_+	hypothetical protein	NA	NA	NA	NA	NA
AWD99036.1|39585_40362_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	92.9	6.4e-53
46474:47294	attR	AGCTCCATCAGCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTGCAACAGTGCCCTCTATTGCGTGACGTAGATTCGTGACGTATAGTTACTGCAACTTATTTGTTTATAACTACCGTCAGGTACAAAATTATGTCTCCCGTACAAGCTAAACAAAAGCAGCATGAACGCTACGAAGCCGTAGCGGTGCAGGTTTTGCGTGGTCGTGCCGGTTACAAACCTGCCGTGAAAAGCCGCTTCAGTAAGTCAGCTAGTAGCAAATTCGCTCATACTATCGCTTTTGCCTGATCCTGAACTTTGAGGCACAATAAACCATCATTCGCTGATGGTTTTTTTATGCCTGTTCAAGACGTTATTCCCCCCTATGAGCAGATGTACCTGCTAAATCAGCAGCTGATCTGCAACGCTGATCAGTTCAAACATGCCGTTATCACAGTTGGCGGTCAGGCTGTGCAATACTGGATATCCTATTATCATGCACAATACGGCGACAGATTGCCTGATGAGCGCCTCACCACATCTGTTGACTGCGACTACAGCGCCCGGAAAGATGATATTGCGGCTATAGCAAAAACGCTCAACGTTAAGACGTGGGAGAACAAAGACGGTCAGCCCCCATCCCTTGCGCAGTTTATGCTTATCGATCAGGATACACACGATATCAAACGGGATGATGGACGCTTATTTGCCGTACCGGATGCGCCTGACGAGCCAAATGTGGTGGATATTATCGACCGCCCCGGAGGCTTTGACCGTTCTGATTTTCAGGGGAAAAAGCTTTACCTGTATACCGCCCCGTTTTATGTAGAAGCAACCG	NA	NA	NA	NA
