assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003060825.1_ASM306082v1	CP028922	Paenibacillus sp. CAA11 chromosome, complete genome	1	492449-493739	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,RT,csa3,WYL,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cmr6gr7,DinG	Type I-C, Type I-U?,Type I-U	ATTTCAATCCACGCACCCATATAGGGTGCGAC,ATTTCAATCCACGCACCCATATAGGGTGCGAC,ATTTCAATCCACGCACCCATATAGGGTGCGAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	19,19,14	19	TypeI-C,TypeI-U?,TypeI-U	cas3,RT,csa3,WYL,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cmr6gr7,DinG	NA|84aa|up_9|CP028922.1_484767_485019_+,NA|101aa|up_6|CP028922.1_487596_487899_+,NA|76aa|up_5|CP028922.1_488142_488370_+,NA|185aa|up_4|CP028922.1_488391_488946_+,NA|61aa|up_2|CP028922.1_490159_490342_+,NA	NA|84aa|up_9|CP028922.1_484767_485019_+	NA	NA|136aa|up_8|CP028922.1_485861_486269_+	pfam14433, SUKH-3, SUKH-3 immunity protein	NA|134aa|up_7|CP028922.1_487171_487573_+	pfam14436, EndoU_bacteria, Bacterial EndoU nuclease	NA|101aa|up_6|CP028922.1_487596_487899_+	NA	NA|76aa|up_5|CP028922.1_488142_488370_+	NA	NA|185aa|up_4|CP028922.1_488391_488946_+	NA	NA|169aa|up_3|CP028922.1_489326_489833_+	pfam14435, SUKH-4, SUKH-4 immunity protein	NA|61aa|up_2|CP028922.1_490159_490342_+	NA	NA|170aa|up_1|CP028922.1_490794_491304_+	pfam14435, SUKH-4, SUKH-4 immunity protein	NA|228aa|up_0|CP028922.1_491616_492300_-	cd06559, Endonuclease_V, Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases	cas3|809aa|down_0|CP028922.1_494163_496590_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|240aa|down_1|CP028922.1_496622_497342_+	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas8c|643aa|down_2|CP028922.1_497342_499271_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|289aa|down_3|CP028922.1_499271_500138_+	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas4|220aa|down_4|CP028922.1_500124_500784_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|344aa|down_5|CP028922.1_500780_501812_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|down_6|CP028922.1_501821_502112_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|309aa|down_7|CP028922.1_504534_505461_+	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|237aa|down_8|CP028922.1_505453_506164_+	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein	NA|245aa|down_9|CP028922.1_506194_506929_+	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein
GCA_003060825.1_ASM306082v1	CP028922	Paenibacillus sp. CAA11 chromosome, complete genome	2	502300-504343	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,RT,csa3,WYL,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cmr6gr7,DinG	Type I-C, Type I-U?,Type I-U	GTCGCACCCCGAGTGGGTGCGTGGATTGAAAT,GTCGCACCCCNNGTGGGTGCGTGGATTGAAAT,ATTTCAATCCACGCACCCAC	32,32,20	0	0	NA	NA	I-C:I-C:NA	30,30,29	30	TypeI-C,TypeI-U?,TypeI-U	cas3,RT,csa3,WYL,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cmr6gr7,DinG	NA|61aa|up_9|CP028922.1_490159_490342_+,NA|115aa|down_7|CP028922.1_519395_519740_-	NA|61aa|up_9|CP028922.1_490159_490342_+	NA	NA|170aa|up_8|CP028922.1_490794_491304_+	pfam14435, SUKH-4, SUKH-4 immunity protein	NA|228aa|up_7|CP028922.1_491616_492300_-	cd06559, Endonuclease_V, Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases	cas3|809aa|up_6|CP028922.1_494163_496590_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|240aa|up_5|CP028922.1_496622_497342_+	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas8c|643aa|up_4|CP028922.1_497342_499271_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|289aa|up_3|CP028922.1_499271_500138_+	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas4|220aa|up_2|CP028922.1_500124_500784_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|344aa|up_1|CP028922.1_500780_501812_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|CP028922.1_501821_502112_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|309aa|down_0|CP028922.1_504534_505461_+	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|237aa|down_1|CP028922.1_505453_506164_+	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein	NA|245aa|down_2|CP028922.1_506194_506929_+	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein	NA|773aa|down_3|CP028922.1_507208_509527_-	PRK13807, PRK13807, maltose phosphorylase; Provisional	NA|218aa|down_4|CP028922.1_509621_510275_-	TIGR01990, bPGM, beta-phosphoglucomutase	NA|346aa|down_5|CP028922.1_510403_511441_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|2525aa|down_6|CP028922.1_511813_519388_+	TIGR02104, pulA_typeI, pullulanase, type I	NA|115aa|down_7|CP028922.1_519395_519740_-	NA	NA|583aa|down_8|CP028922.1_519930_521679_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|582aa|down_9|CP028922.1_521954_523700_-	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins
GCA_003060825.1_ASM306082v1	CP028922	Paenibacillus sp. CAA11 chromosome, complete genome	3	1014906-1015032	3	CRISPRCasFinder	no	DEDDh	cas3,RT,csa3,WYL,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cmr6gr7,DinG	Unclear	AAGTTCAATATAAAACTTTAGATCAATCTATTTAGAT	37	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,WYL,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cmr6gr7,DinG	NA|183aa|up_6|CP028922.1_1006618_1007167_+,NA|111aa|down_5|CP028922.1_1020639_1020972_+	NA|156aa|up_9|CP028922.1_1002294_1002762_+	cd04679, Nudix_Hydrolase_20, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|369aa|up_8|CP028922.1_1003087_1004194_+	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	NA|698aa|up_7|CP028922.1_1004495_1006589_+	PRK06922, PRK06922, class I SAM-dependent methyltransferase	NA|183aa|up_6|CP028922.1_1006618_1007167_+	NA	NA|798aa|up_5|CP028922.1_1007318_1009712_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|363aa|up_4|CP028922.1_1010097_1011186_-	cd01844, SGNH_hydrolase_like_6, SGNH_hydrolase subfamily	NA|239aa|up_3|CP028922.1_1011402_1012119_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|253aa|up_2|CP028922.1_1012230_1012989_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|247aa|up_1|CP028922.1_1012991_1013732_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|337aa|up_0|CP028922.1_1013731_1014742_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|399aa|down_0|CP028922.1_1015114_1016311_+	sd00045, ANK, ankyrin repeats	NA|214aa|down_1|CP028922.1_1016437_1017079_-	cd14845, L-Ala-D-Glu_peptidase_like, L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase	NA|521aa|down_2|CP028922.1_1017120_1018683_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	DEDDh|298aa|down_3|CP028922.1_1018745_1019639_-	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|234aa|down_4|CP028922.1_1019911_1020613_+	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain	NA|111aa|down_5|CP028922.1_1020639_1020972_+	NA	NA|266aa|down_6|CP028922.1_1020984_1021782_+	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters	NA|264aa|down_7|CP028922.1_1021888_1022680_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|573aa|down_8|CP028922.1_1022941_1024660_+	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins	NA|448aa|down_9|CP028922.1_1024779_1026123_+	TIGR03356, BGL, beta-galactosidase
GCA_003060825.1_ASM306082v1	CP028922	Paenibacillus sp. CAA11 chromosome, complete genome	4	2000500-2002468	3,4,3	PILER-CR,CRISPRCasFinder,CRT	no	cmr6gr7	cas3,RT,csa3,WYL,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cmr6gr7,DinG	 Type III-C?,Type III-B	ATTTCAATCCACGCACTCATGTAGAGTGCGAC,ATTTCAATCCACGCACTCATGTAGAGTGCGAC,ATTTCAATCCACGCACTCATGTAGAGTGCGAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	29,29,29	29	TypeIII-C?,TypeIII-B	cas3,RT,csa3,WYL,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cmr6gr7,DinG	NA|211aa|up_0|CP028922.1_1999629_2000262_+,NA|639aa|down_6|CP028922.1_2008338_2010255_-	NA|188aa|up_9|CP028922.1_1991063_1991627_+	pfam11181, YflT, Heat induced stress protein YflT	NA|445aa|up_8|CP028922.1_1991769_1993104_+	pfam13360, PQQ_2, PQQ-like domain	NA|287aa|up_7|CP028922.1_1993273_1994134_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|214aa|up_6|CP028922.1_1994108_1994750_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|240aa|up_5|CP028922.1_1994988_1995708_+	pfam02511, Thy1, Thymidylate synthase complementing protein	NA|121aa|up_4|CP028922.1_1996058_1996421_+	pfam02334, RTP, Replication terminator protein	NA|440aa|up_3|CP028922.1_1996447_1997767_+	cd03682, ClC_sycA_like, ClC sycA-like chloride channel proteins	NA|209aa|up_2|CP028922.1_1997867_1998494_+	PRK13556, PRK13556, FMN-dependent NADH-azoreductase	NA|238aa|up_1|CP028922.1_1998612_1999326_+	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|211aa|up_0|CP028922.1_1999629_2000262_+	NA	NA|65aa|down_0|CP028922.1_2003002_2003197_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|268aa|down_1|CP028922.1_2003193_2003997_+	COG1604, COG1604, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|68aa|down_2|CP028922.1_2004069_2004273_+	pfam09855, zinc_ribbon_13, Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)	NA|406aa|down_3|CP028922.1_2004464_2005682_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|255aa|down_4|CP028922.1_2005990_2006755_+	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine	NA|428aa|down_5|CP028922.1_2006910_2008194_-	COG4124, ManB, Beta-mannanase [Carbohydrate transport and metabolism]	NA|639aa|down_6|CP028922.1_2008338_2010255_-	NA	NA|232aa|down_7|CP028922.1_2010459_2011155_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|366aa|down_8|CP028922.1_2011144_2012242_+	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|174aa|down_9|CP028922.1_2012500_2013022_+	TIGR02950, RNA_polymerase_ECF-type_sigma_factor, RNA polymerase sigma factor, SigM family
GCA_003060825.1_ASM306082v1	CP028922	Paenibacillus sp. CAA11 chromosome, complete genome	5	2792752-2792839	5	CRISPRCasFinder	no		cas3,RT,csa3,WYL,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cmr6gr7,DinG	Orphan	GGAAGCTTATGCTATACAAACTTGAG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,WYL,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cmr6gr7,DinG	NA|148aa|up_1|CP028922.1_2791128_2791572_-,NA	NA|270aa|up_9|CP028922.1_2784542_2785352_-	PRK00023, cmk, (d)CMP kinase	NA|72aa|up_8|CP028922.1_2785363_2785579_-	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS	NA|218aa|up_7|CP028922.1_2785637_2786291_-	COG5581, COG5581, c-di-GMP-binding protein [Signal transduction mechanisms]	NA|455aa|up_6|CP028922.1_2786429_2787794_-	pfam14620, YPEB, YpeB sporulation	NA|230aa|up_5|CP028922.1_2788112_2788802_-	pfam13367, PrsW-protease, Protease prsW family	NA|206aa|up_4|CP028922.1_2788919_2789537_-	PRK02899, PRK02899, genetic competence negative regulator	NA|121aa|up_3|CP028922.1_2789732_2790095_-	cd19122, AKR_AKR3E1, AKR3E family of aldo-keto reductase (AKR)	NA|294aa|up_2|CP028922.1_2790196_2791078_+	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|148aa|up_1|CP028922.1_2791128_2791572_-	NA	NA|194aa|up_0|CP028922.1_2791574_2792156_-	pfam02517, Abi, CAAX protease self-immunity	NA|530aa|down_0|CP028922.1_2792851_2794441_+	PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase; Provisional	NA|477aa|down_1|CP028922.1_2794574_2796005_-	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK	NA|239aa|down_2|CP028922.1_2796005_2796722_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|248aa|down_3|CP028922.1_2796872_2797616_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|164aa|down_4|CP028922.1_2797749_2798241_-	COG0700, SpmB, Uncharacterized membrane protein [Function unknown]	NA|214aa|down_5|CP028922.1_2798279_2798921_-	COG2715, SpmA, Uncharacterized membrane protein, required for spore maturation in B	NA|361aa|down_6|CP028922.1_2798961_2800044_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|162aa|down_7|CP028922.1_2800201_2800687_-	TIGR02874, conserved_hypothetical_protein, sporulation protein YtfJ	NA|230aa|down_8|CP028922.1_2800778_2801468_-	pfam11167, DUF2953, Protein of unknown function (DUF2953)	NA|200aa|down_9|CP028922.1_2801579_2802179_-	PRK00135, scpB, segregation and condensation protein B; Reviewed
