The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP028922	Paenibacillus sp. CAA11 chromosome, complete genome	4888410	804091	814590	4888410		Mollivirus(25.0%)	9	NA	NA
AWB43385.1|804091_805390_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	26.1	3.1e-20
AWB43386.1|805433_806327_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	33.6	4.6e-39
AWB43387.1|806414_806660_+	phosphoribosylformylglycinamidine synthase	NA	A0A0E3FJ99	Synechococcus_phage	35.1	1.8e-06
AWB43388.1|806665_807355_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
AWB43389.1|807332_809576_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	42.6	9.5e-166
AWB43390.1|809560_811030_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.2	2.3e-51
AWB43391.1|811171_812215_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.2	4.2e-68
AWB43392.1|812214_812844_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	3.6e-22
AWB43393.1|813042_814590_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	50.0	9.4e-72
>prophage 2
CP028922	Paenibacillus sp. CAA11 chromosome, complete genome	4888410	1349569	1357060	4888410		Clostridioides_phage(16.67%)	10	NA	NA
AWB43861.1|1349569_1349797_+	transcriptional regulator	NA	A0A1V0E021	Clostridioides_phage	47.4	4.5e-07
AWB43862.1|1349771_1350236_+	hypothetical protein	NA	NA	NA	NA	NA
AWB43863.1|1350346_1351324_-	bifunctional glyoxylate/hydroxypyruvate reductase B	NA	NA	NA	NA	NA
AWB43864.1|1351503_1352001_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	67.9	4.7e-49
AWB43865.1|1352034_1352796_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	46.4	1.6e-56
AWB43866.1|1352792_1353284_-	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	67.3	5.1e-56
AWB43867.1|1353280_1353949_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	54.4	3.1e-64
AWB43868.1|1354321_1355188_+	FAA hydrolase family protein	NA	NA	NA	NA	NA
AWB46837.1|1355264_1356038_-	transcriptional regulator	NA	NA	NA	NA	NA
AWB43869.1|1356106_1357060_-	transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	28.6	2.5e-14
>prophage 3
CP028922	Paenibacillus sp. CAA11 chromosome, complete genome	4888410	1599942	1608122	4888410		Bacillus_phage(50.0%)	7	NA	NA
AWB44074.1|1599942_1600800_+	NAD(P)-dependent oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	46.1	3.6e-57
AWB44075.1|1600923_1601535_-	5'-deoxynucleotidase	NA	A0A2L0V156	Salmonella_phage	31.2	3.5e-06
AWB44076.1|1601689_1603246_+	fumarate hydratase	NA	NA	NA	NA	NA
AWB44077.1|1603273_1605070_+	PAS domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	36.1	1.4e-39
AWB44078.1|1605197_1605929_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	34.5	1.8e-36
AWB44079.1|1606022_1607195_+	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	29.6	1.2e-10
AWB44080.1|1607366_1608122_+	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.9	1.5e-14
>prophage 4
CP028922	Paenibacillus sp. CAA11 chromosome, complete genome	4888410	2801579	2806585	4888410		Staphylococcus_phage(66.67%)	6	NA	NA
AWB45049.1|2801579_2802179_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	33.7	2.0e-17
AWB45050.1|2802147_2802942_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	32.3	2.9e-08
AWB45051.1|2803015_2803483_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	60.9	6.5e-45
AWB45052.1|2803516_2804755_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	52.5	3.1e-118
AWB45053.1|2804815_2805481_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	43.5	4.5e-39
AWB45054.1|2805481_2806585_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	39.3	3.3e-55
>prophage 5
CP028922	Paenibacillus sp. CAA11 chromosome, complete genome	4888410	3039727	3131824	4888410	integrase,tRNA,tail,capsid,plate,terminase,portal	uncultured_Caudovirales_phage(21.28%)	103	3074865:3074882	3109718:3109735
AWB45260.1|3039727_3040417_-	N-acetylmuramoyl-L-alanine amidase	NA	D6QWL7	uncultured_phage	41.8	7.9e-31
AWB46965.1|3040463_3040721_-	hypothetical protein	NA	A0A2I6UHL7	Bacillus_phage	46.4	6.2e-05
AWB45261.1|3040855_3041062_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45262.1|3041161_3041374_-	hypothetical protein	NA	A0A290GDY2	Caldibacillus_phage	46.4	3.1e-10
AWB45263.1|3041370_3041550_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45264.1|3041621_3042182_-	copper amine oxidase	NA	NA	NA	NA	NA
AWB45265.1|3042222_3044394_-	hypothetical protein	NA	Q597U4	Lactobacillus_virus	23.3	1.3e-15
AWB45266.1|3044403_3044928_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45267.1|3044924_3045068_-	XkdX family protein	NA	NA	NA	NA	NA
AWB45268.1|3045060_3045501_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45269.1|3045513_3046707_-	hypothetical protein	NA	A0A0X8WQL0	Ralstonia_phage	67.4	2.5e-08
AWB45270.1|3046729_3047134_-	hypothetical protein	NA	H6BJ44	Methylophilales_phage	43.3	5.5e-24
AWB45271.1|3047165_3047714_-|tail	phage tail protein	tail	NA	NA	NA	NA
AWB45272.1|3047710_3052357_-|tail	phage tail tape measure protein	tail	A0A2H4J055	uncultured_Caudovirales_phage	44.0	9.4e-67
AWB45273.1|3052394_3052667_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45274.1|3052696_3053083_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45275.1|3053144_3053669_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45276.1|3053737_3054109_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45277.1|3054110_3054521_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45278.1|3054520_3054841_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45279.1|3054842_3055241_-	hypothetical protein	NA	A0A0N9SGG4	Paenibacillus_phage	40.8	9.9e-18
AWB45280.1|3055256_3055466_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45281.1|3055485_3056577_-	hypothetical protein	NA	A0A2H4J2M3	uncultured_Caudovirales_phage	56.1	2.8e-107
AWB45282.1|3056643_3057345_-	scaffolding protein	NA	A0A2H4IZP8	uncultured_Caudovirales_phage	58.9	4.4e-21
AWB45283.1|3057426_3058386_-	hypothetical protein	NA	A0A0K2CNR4	Brevibacillus_phage	30.2	1.6e-13
AWB45284.1|3058732_3059530_-|capsid	minor capsid protein	capsid	A0A0N9SJR1	Paenibacillus_phage	55.7	3.0e-74
AWB46966.1|3059529_3060903_-|portal	portal protein	portal	A0A2H4J180	uncultured_Caudovirales_phage	51.2	1.3e-125
AWB45285.1|3061112_3062717_-	hypothetical protein	NA	A0A0N9RZA7	Paenibacillus_phage	54.8	9.8e-157
AWB45286.1|3063449_3063851_-	hypothetical protein	NA	A0A0N7GFF5	Paenibacillus_phage	61.8	5.3e-35
AWB45287.1|3063898_3064090_-	BC1881 family protein	NA	NA	NA	NA	NA
AWB45288.1|3064479_3065379_-	hypothetical protein	NA	A0A0N9S810	Paenibacillus_phage	22.5	8.0e-07
AWB45289.1|3065350_3065599_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45290.1|3065842_3066037_+	hypothetical protein	NA	NA	NA	NA	NA
AWB45291.1|3066053_3066284_+	hypothetical protein	NA	NA	NA	NA	NA
AWB45292.1|3066343_3066721_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45293.1|3066797_3067265_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45294.1|3067354_3068269_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45295.1|3068454_3068910_-	hypothetical protein	NA	B5LPL2	Bacillus_virus	58.6	1.6e-35
AWB45296.1|3068987_3069716_-	helix-turn-helix domain-containing protein	NA	A0A0A8WFH2	Clostridium_phage	39.6	1.8e-17
AWB45297.1|3070034_3070397_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45298.1|3070475_3070922_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45299.1|3071131_3071350_+	Cro/Cl family transcriptional regulator	NA	A0A0E3U244	Fusobacterium_phage	49.3	4.0e-13
AWB45300.1|3072638_3073118_+	hypothetical protein	NA	A0A290FZK7	Caldibacillus_phage	53.8	6.3e-27
AWB45301.1|3073259_3073484_+	hypothetical protein	NA	NA	NA	NA	NA
AWB45302.1|3073483_3073819_+	hypothetical protein	NA	NA	NA	NA	NA
AWB46967.1|3073881_3074688_+	DNA-binding protein	NA	A0A2H4JAT4	uncultured_Caudovirales_phage	48.9	1.1e-63
AWB45303.1|3074850_3075483_-	hypothetical protein	NA	A0A1L2JY34	Aeribacillus_phage	61.2	4.6e-33
3074865:3074882	attL	TTTTCTTGTCGATGAGCA	NA	NA	NA	NA
AWB45304.1|3075505_3076087_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45305.1|3076142_3076349_-	transcriptional regulator	NA	A0A288WG81	Bacillus_phage	60.6	6.2e-16
AWB45306.1|3076461_3076866_+	hypothetical protein	NA	NA	NA	NA	NA
AWB45307.1|3076917_3077184_-	hypothetical protein	NA	A0A2I7SCG0	Paenibacillus_phage	43.2	3.1e-07
AWB45308.1|3077302_3078169_+	ATP-dependent DNA ligase	NA	A0A2H4JD86	uncultured_Caudovirales_phage	33.8	3.8e-22
AWB45309.1|3078263_3079865_+	hypothetical protein	NA	NA	NA	NA	NA
AWB46968.1|3079895_3080078_-	hypothetical protein	NA	NA	NA	NA	NA
AWB46969.1|3080178_3081159_-|integrase	integrase	integrase	A0A0F7LBR0	Escherichia_phage	28.1	8.1e-13
AWB46970.1|3081330_3082230_-|integrase	integrase	integrase	A0A142F1N9	Bacillus_phage	33.5	5.0e-25
AWB45310.1|3082907_3083732_-	hypothetical protein	NA	A0A1U9WQS3	Geobacillus_phage	38.5	4.4e-36
AWB45311.1|3083739_3083967_-	hypothetical protein	NA	S5MNY8	Brevibacillus_phage	42.9	3.4e-07
AWB45312.1|3083971_3084346_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45313.1|3084429_3084609_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45314.1|3084601_3084943_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45315.1|3086369_3086954_-|portal	phage portal protein	portal	A0A0A7RUW8	Clostridium_phage	38.1	2.6e-27
AWB45316.1|3086946_3088065_-|plate	Baseplate J family protein	plate	S6AVU3	Thermus_phage	36.5	1.2e-44
AWB45317.1|3088066_3088540_-	DUF2634 domain-containing protein	NA	A0A2H4J4Q8	uncultured_Caudovirales_phage	42.3	2.3e-21
AWB46971.1|3088532_3088916_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45318.1|3088932_3089913_-|portal	phage portal protein	portal	A0A0N6W8H4	Bacillus_phage	52.0	2.7e-85
AWB45319.1|3089909_3090554_-|terminase	terminase	terminase	A0A0N7ACF7	Bacillus_phage	48.0	7.2e-42
AWB45320.1|3090576_3092220_-	hypothetical protein	NA	NA	NA	NA	NA
AWB46972.1|3092396_3092831_-	hypothetical protein	NA	A0A2H4J883	uncultured_Caudovirales_phage	40.1	1.0e-20
AWB45321.1|3092901_3093309_-|portal	phage portal protein	portal	A0A2H4J032	uncultured_Caudovirales_phage	61.8	1.0e-41
AWB45322.1|3093341_3094808_-|tail	phage tail sheath protein	tail	A0A0N7AEC6	Bacillus_phage	37.2	1.3e-78
AWB45323.1|3094809_3095001_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45324.1|3095012_3095981_-	hypothetical protein	NA	NA	NA	NA	NA
AWB46973.1|3096201_3096630_-	ArpU family transcriptional regulator	NA	A0A0K2CYZ6	Paenibacillus_phage	45.8	1.8e-25
AWB45325.1|3096818_3097163_+	XRE family transcriptional regulator	NA	A8ATX5	Listeria_phage	34.0	2.6e-06
AWB45326.1|3097254_3097860_+	hypothetical protein	NA	A0A2H4JA43	uncultured_Caudovirales_phage	34.1	1.9e-20
AWB45327.1|3097860_3098202_+	hypothetical protein	NA	NA	NA	NA	NA
AWB45328.1|3098287_3098491_+	hypothetical protein	NA	NA	NA	NA	NA
AWB45329.1|3098535_3099936_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	25.8	1.7e-24
AWB45330.1|3100539_3102357_-	amino acid permease	NA	NA	NA	NA	NA
AWB45331.1|3102703_3103066_+	hypothetical protein	NA	NA	NA	NA	NA
AWB46974.1|3103428_3104295_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45332.1|3104507_3104675_+	asparagine synthase	NA	NA	NA	NA	NA
AWB45333.1|3104942_3105281_+	hypothetical protein	NA	NA	NA	NA	NA
AWB45334.1|3105957_3107463_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AWB45335.1|3107513_3109013_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AWB46975.1|3109052_3110528_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
3109718:3109735	attR	TTTTCTTGTCGATGAGCA	NA	NA	NA	NA
AWB45336.1|3110551_3111442_-	ABC transporter	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-33
AWB45337.1|3111445_3114343_-	ABC transporter permease	NA	NA	NA	NA	NA
AWB45338.1|3114342_3115476_-	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AWB46976.1|3115441_3116146_-	ABC transporter	NA	G9BWD6	Planktothrix_phage	37.8	1.7e-33
AWB45339.1|3116640_3117285_-	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
AWB45340.1|3117277_3118015_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
AWB45341.1|3118071_3121293_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
AWB45342.1|3121292_3122432_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	37.4	3.7e-57
AWB45343.1|3122507_3123797_-	dihydroorotase	NA	NA	NA	NA	NA
AWB45344.1|3123875_3124790_-	aspartate carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	33.7	1.3e-28
AWB45345.1|3124786_3125341_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
AWB45346.1|3125843_3126791_-	RNA pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	27.6	1.8e-09
AWB45347.1|3126787_3127279_-	signal peptidase II	NA	NA	NA	NA	NA
AWB45348.1|3127486_3128224_+	molecular chaperone DnaK	NA	NA	NA	NA	NA
AWB46977.1|3128210_3128507_-	hypothetical protein	NA	NA	NA	NA	NA
AWB45349.1|3128725_3131824_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	34.4	5.1e-162
