The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP028826	Pseudomonas fluorescens strain MS82 chromosome, complete genome	6207556	1270852	1380724	6207556	tail,tRNA,plate,holin,lysis	Pseudomonas_phage(46.3%)	109	NA	NA
AWA38111.1|1270852_1271671_+|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	33.9	3.0e-08
AWA38112.1|1271825_1272233_-	Fe-S metabolism protein SufE	NA	NA	NA	NA	NA
AWA38113.1|1272229_1273435_-	cysteine desulfurase CsdA	NA	Q2XUY6	environmental_halophage	35.6	4.9e-68
AWA38114.1|1273560_1274595_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AWA38115.1|1274626_1274989_-	ArsC family reductase	NA	NA	NA	NA	NA
AWA38116.1|1275170_1276802_+	Na+/H+ antiporter	NA	NA	NA	NA	NA
AWA38117.1|1276826_1277498_-	hypothetical protein	NA	NA	NA	NA	NA
AWA38118.1|1277680_1278415_-	peptidase M12	NA	NA	NA	NA	NA
AWA38119.1|1278580_1279780_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA	NA
AWA38120.1|1279823_1282526_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
AWA38121.1|1282566_1283349_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
AWA38122.1|1283723_1284461_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
AWA38123.1|1284651_1285515_+	elongation factor Ts	NA	NA	NA	NA	NA
AWA38124.1|1285726_1286470_+	UMP kinase	NA	NA	NA	NA	NA
AWA38125.1|1286466_1287024_+	ribosome-recycling factor	NA	NA	NA	NA	NA
AWA38126.1|1287038_1287794_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	38.1	1.1e-17
AWA38127.1|1287793_1288600_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
AWA42396.1|1288596_1289787_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
AWA38128.1|1291266_1293642_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
AWA38129.1|1293687_1294191_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
AWA38130.1|1294194_1295250_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AWA38131.1|1295356_1295797_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AWA38132.1|1295793_1296570_+	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AWA38133.1|1296572_1297703_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AWA38134.1|1297714_1298341_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	38.9	1.3e-27
AWA38135.1|1298417_1301939_+	DNA polymerase III subunit alpha	NA	A0A1C9LWZ5	Streptomyces_phage	37.0	4.1e-200
AWA38136.1|1302078_1303026_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
AWA38137.1|1303173_1304502_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A7IXR9	Paramecium_bursaria_Chlorella_virus	24.6	3.8e-05
AWA38138.1|1304776_1306408_+	CTP synthetase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.5	2.4e-158
AWA38139.1|1306413_1307259_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.4	4.7e-49
AWA38140.1|1307415_1308705_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	6.9e-137
AWA38141.1|1308876_1309155_+	cell division protein FtsB	NA	NA	NA	NA	NA
AWA38142.1|1309151_1309859_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AWA38143.1|1309855_1310752_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AWA38144.1|1310868_1311981_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.5	1.1e-32
AWA38145.1|1312036_1312882_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
AWA38146.1|1312925_1313399_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
AWA38147.1|1313395_1314454_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
AWA38148.1|1314441_1315191_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.0	3.0e-68
AWA38149.1|1315190_1315868_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	50.2	1.1e-43
AWA38150.1|1316080_1316962_+	peptigoglycan-binding protein LysM	NA	A0A0S2SXL7	Bacillus_phage	33.3	6.6e-06
AWA38151.1|1317068_1318076_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
AWA38152.1|1318564_1318888_-	ferredoxin family protein	NA	NA	NA	NA	NA
AWA38153.1|1319051_1321634_-	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	22.8	1.6e-28
AWA38154.1|1321844_1322579_+	XRE family transcriptional regulator	NA	B5TK58	Pseudomonas_phage	95.1	5.0e-132
AWA38155.1|1323106_1323526_+	hypothetical protein	NA	NA	NA	NA	NA
AWA42397.1|1323656_1324076_+|tail	tail assembly chaperone	tail	NA	NA	NA	NA
AWA38156.1|1324219_1324411_+	Com family DNA-binding transcriptional regulator	NA	B5TK59	Pseudomonas_phage	84.2	7.3e-11
AWA38157.1|1324415_1324994_+	DUF642 domain-containing protein	NA	NA	NA	NA	NA
AWA38158.1|1325104_1325443_+|holin	pyocin R2, holin	holin	B5TK61	Pseudomonas_phage	87.3	3.2e-49
AWA38159.1|1325517_1326039_+	hypothetical protein	NA	NA	NA	NA	NA
AWA38160.1|1326042_1326651_+|plate	phage baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	56.7	2.5e-36
AWA38161.1|1326665_1326998_+|plate	phage baseplate protein	plate	A0A2H4JI46	uncultured_Caudovirales_phage	70.0	3.6e-37
AWA38162.1|1326994_1327990_+|plate	baseplate J protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	62.9	3.0e-111
AWA38163.1|1327986_1328622_+|tail	phage tail protein I	tail	A0A2H4JDK0	uncultured_Caudovirales_phage	52.5	6.8e-45
AWA38164.1|1331574_1332120_+	DUF4376 domain-containing protein	NA	A0A1S5R1J2	Pseudomonas_phage	50.0	4.8e-23
AWA38165.1|1332221_1332407_+	hypothetical protein	NA	NA	NA	NA	NA
AWA38166.1|1332409_1333576_+|tail	phage tail protein	tail	B0ZSG8	Halomonas_phage	56.7	4.7e-124
AWA38167.1|1333575_1334082_+|tail	phage tail protein	tail	Q6R4W3	Vibrio_virus	35.1	9.0e-24
AWA38168.1|1334181_1334763_+|tail	phage tail assembly protein	tail	B0ZSH0	Halomonas_phage	35.7	7.2e-25
AWA38169.1|1334891_1337090_+|tail	phage tail tape measure protein	tail	NA	NA	NA	NA
AWA38170.1|1337086_1337470_+	hypothetical protein	NA	A0A2H4JAC8	uncultured_Caudovirales_phage	52.0	5.0e-35
AWA38171.1|1337462_1337675_+|tail	phage tail protein	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	64.3	1.8e-18
AWA38172.1|1337684_1338713_+|tail	phage tail protein	tail	B0ZSH3	Halomonas_phage	51.3	8.1e-96
AWA38173.1|1338774_1339359_+	hypothetical protein	NA	B5TK65	Pseudomonas_phage	76.8	1.9e-81
AWA38174.1|1339355_1339535_+	DUF2635 domain-containing protein	NA	B5TK66	Pseudomonas_phage	80.0	5.2e-19
AWA38175.1|1339534_1341031_+|tail	phage tail protein	tail	B5TK67	Pseudomonas_phage	91.8	7.5e-260
AWA38176.1|1341098_1341446_+|tail	phage tail protein	tail	B5TK68	Pseudomonas_phage	93.9	3.8e-58
AWA38177.1|1341442_1341739_+|tail	phage tail assembly protein	tail	B5TK69	Pseudomonas_phage	90.8	2.8e-41
AWA38178.1|1341869_1343888_+|tail	phage tail protein	tail	B5TK70	Pseudomonas_phage	53.6	1.7e-60
AWA38179.1|1343874_1345110_+	hydroxyacid dehydrogenase	NA	B5TK71	Pseudomonas_phage	72.1	1.2e-170
AWA38180.1|1345113_1346157_+|plate	baseplate protein	plate	B5TK72	Pseudomonas_phage	79.4	2.2e-157
AWA38181.1|1346315_1346825_+|plate	phage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	86.4	6.4e-78
AWA38182.1|1346824_1347223_+	hypothetical protein	NA	B5TK74	Pseudomonas_phage	93.9	4.7e-68
AWA38183.1|1347212_1348256_+|plate	baseplate J protein	plate	B5TK75	Pseudomonas_phage	80.9	3.2e-156
AWA38184.1|1348243_1348843_+	DUF2313 domain-containing protein	NA	B5TK76	Pseudomonas_phage	90.5	3.6e-104
AWA38185.1|1348854_1349949_+|tail	phage tail protein	tail	B5TK79	Pseudomonas_phage	75.8	1.5e-161
AWA38186.1|1349956_1350523_+|tail	phage tail protein	tail	B5TK80	Pseudomonas_phage	68.7	6.2e-74
AWA38187.1|1350545_1351472_+	hypothetical protein	NA	B5TK77	Pseudomonas_phage	72.7	3.8e-20
AWA38188.1|1351471_1351939_+	hypothetical protein	NA	NA	NA	NA	NA
AWA38189.1|1351980_1352877_+|tail	phage tail protein	tail	B5TK81	Pseudomonas_phage	48.6	2.5e-61
AWA38190.1|1352877_1353324_+	hypothetical protein	NA	B5TK82	Pseudomonas_phage	39.2	8.8e-23
AWA38191.1|1353342_1354503_+	hypothetical protein	NA	B5TK77	Pseudomonas_phage	57.0	1.3e-17
AWA38192.1|1354502_1354757_+	hypothetical protein	NA	NA	NA	NA	NA
AWA38193.1|1354790_1355354_+	glycoside hydrolase family 19 protein	NA	B5TK83	Pseudomonas_phage	81.2	3.2e-86
AWA38194.1|1355335_1355866_+|lysis	lysis protein	lysis	B5TK84	Pseudomonas_phage	75.3	3.7e-60
AWA38195.1|1355934_1356435_+	damage-inducible protein CinA	NA	B5TK85	Pseudomonas_phage	88.0	5.0e-75
AWA38196.1|1356518_1357577_+	DNA recombination/repair protein RecA	NA	A0A0S2MVG1	Bacillus_phage	58.9	4.5e-110
AWA38197.1|1357585_1358056_+	recombination regulator RecX	NA	NA	NA	NA	NA
AWA38198.1|1358124_1359243_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA	NA
AWA38199.1|1359595_1359790_+	hypothetical protein	NA	NA	NA	NA	NA
AWA38200.1|1359790_1360216_-	hypothetical protein	NA	NA	NA	NA	NA
AWA38201.1|1360405_1361149_+	DTW domain-containing protein	NA	NA	NA	NA	NA
AWA38202.1|1361374_1362025_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AWA38203.1|1362100_1362463_+	diacylglycerol kinase	NA	NA	NA	NA	NA
AWA38204.1|1362459_1363386_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AWA38205.1|1363530_1364310_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
AWA38206.1|1364420_1365128_-|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
AWA38207.1|1365317_1366088_-	KR domain-containing protein	NA	NA	NA	NA	NA
AWA38208.1|1366244_1366712_-	DUF1456 domain-containing protein	NA	Q9EYF4	Enterobacteria_phage	52.6	1.2e-38
AWA38209.1|1366786_1367497_-	RNA-binding protein	NA	NA	NA	NA	NA
AWA38210.1|1367701_1368175_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AWA38211.1|1368286_1369624_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
AWA38212.1|1369911_1371813_+	potassium transporter Kup	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	34.6	7.4e-79
AWA38213.1|1372077_1373373_-	virulence factor family protein	NA	NA	NA	NA	NA
AWA38214.1|1373372_1376012_-	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA	NA
AWA38215.1|1376927_1377989_+	DNA polymerase IV	NA	NA	NA	NA	NA
AWA38216.1|1378037_1378991_-	hypothetical protein	NA	NA	NA	NA	NA
AWA38217.1|1379008_1380724_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L0T2	Tupanvirus	25.4	6.9e-07
>prophage 2
CP028826	Pseudomonas fluorescens strain MS82 chromosome, complete genome	6207556	3834626	3840814	6207556	tRNA	uncultured_Caudovirales_phage(83.33%)	8	NA	NA
AWA42484.1|3834626_3835019_+	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	76.7	2.3e-51
AWA40271.1|3835020_3835377_+	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	65.8	1.7e-37
AWA40272.1|3835376_3835670_+	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	68.7	2.6e-31
AWA40273.1|3835666_3836002_+	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	82.0	1.6e-45
AWA40274.1|3835998_3837000_+	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	85.4	3.3e-163
AWA40275.1|3837091_3838093_+	glutathione-dependent reductase	NA	NA	NA	NA	NA
AWA40276.1|3838138_3839533_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
AWA40277.1|3839533_3840814_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.9	1.7e-98
>prophage 3
CP028826	Pseudomonas fluorescens strain MS82 chromosome, complete genome	6207556	5647740	5702502	6207556	protease,holin,transposase	Tupanvirus(33.33%)	46	NA	NA
AWA41855.1|5647740_5648244_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
AWA41856.1|5648509_5649397_+	acyltransferase	NA	NA	NA	NA	NA
AWA41857.1|5649398_5649956_-	hypothetical protein	NA	NA	NA	NA	NA
AWA41858.1|5650219_5650618_+	hypothetical protein	NA	NA	NA	NA	NA
AWA41859.1|5650698_5651898_-	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	28.9	2.5e-11
AWA41860.1|5652099_5652957_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AWA41861.1|5652970_5653603_-	sarcosine oxidase subunit gamma	NA	NA	NA	NA	NA
AWA41862.1|5653735_5656753_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA	NA
AWA41863.1|5656749_5657079_-	sarcosine oxidase subunit delta family protein	NA	NA	NA	NA	NA
AWA41864.1|5657093_5658344_-	sarcosine oxidase subunit beta	NA	NA	NA	NA	NA
AWA41865.1|5658364_5659618_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	1.7e-100
AWA41866.1|5659900_5660611_-	conjugal transfer protein TraX	NA	NA	NA	NA	NA
AWA41867.1|5660738_5661779_+	low specificity L-threonine aldolase	NA	NA	NA	NA	NA
AWA41868.1|5662108_5662642_+|transposase	transposase	transposase	NA	NA	NA	NA
AWA41869.1|5662890_5663715_+	short chain dehydrogenase	NA	NA	NA	NA	NA
AWA41870.1|5663805_5664291_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AWA42516.1|5664287_5665736_+	hypothetical protein	NA	A0A2H4JEI9	uncultured_Caudovirales_phage	49.8	5.1e-72
AWA41871.1|5665732_5666119_+	hypothetical protein	NA	NA	NA	NA	NA
AWA41872.1|5666186_5667287_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA	NA
AWA42517.1|5667328_5667523_+	protein GbcA	NA	NA	NA	NA	NA
AWA41873.1|5667568_5668861_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA	NA
AWA41874.1|5669003_5670248_-	metallophosphoesterase	NA	NA	NA	NA	NA
AWA41875.1|5670273_5672142_-	hypothetical protein	NA	NA	NA	NA	NA
AWA41876.1|5672290_5675743_-|holin	choline dehydrogenase	holin	NA	NA	NA	NA
AWA41877.1|5676737_5677508_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
AWA41878.1|5677517_5678738_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
AWA41879.1|5678737_5680687_-	DUF3483 domain-containing protein	NA	NA	NA	NA	NA
AWA41880.1|5680853_5682914_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA	NA
AWA41881.1|5682929_5683460_-	hydrocarbon binding protein	NA	NA	NA	NA	NA
AWA41882.1|5683540_5684515_-	peptidase M19	NA	NA	NA	NA	NA
AWA42518.1|5684749_5685151_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
AWA41883.1|5685196_5686162_-	tyrosinase	NA	NA	NA	NA	NA
AWA41884.1|5686423_5686840_+	DUF3010 domain-containing protein	NA	NA	NA	NA	NA
AWA41885.1|5686840_5688013_-	hypothetical protein	NA	NA	NA	NA	NA
AWA41886.1|5688081_5689026_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
AWA41887.1|5689219_5690164_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
AWA41888.1|5690239_5691127_+	NADPH:quinone reductase	NA	NA	NA	NA	NA
AWA41889.1|5691267_5692233_+	L-carnitine dehydrogenase	NA	NA	NA	NA	NA
AWA41890.1|5692288_5692765_+	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA	NA
AWA41891.1|5692789_5693953_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA	NA
AWA41892.1|5694904_5696188_-	hypothetical protein	NA	NA	NA	NA	NA
AWA41893.1|5696657_5696921_+	hypothetical protein	NA	NA	NA	NA	NA
AWA41894.1|5697046_5698150_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
AWA41895.1|5698817_5700194_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
AWA41896.1|5700628_5701579_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
AWA41897.1|5701656_5702502_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
