assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	1	389582-389677	1	CRISPRCasFinder	no	Cas9_archaeal	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	 or Type II-C?, Type II-B,Type II-A	GATACCAATGATTTGGGATAATT	23	0	0	NA	NA	NA	1	1	TypeII-B,orTypeII-C?,TypeII-A	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|565aa|up_4|CP020114.1_377351_379046_-,NA|120aa|down_4|CP020114.1_399550_399910_-,NA|144aa|down_5|CP020114.1_400250_400682_-	NA|762aa|up_9|CP020114.1_356560_358846_-	pfam13355, DUF4101, Protein of unknown function (DUF4101)	NA|333aa|up_8|CP020114.1_369221_370220_-	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]	Cas9_archaeal|426aa|up_7|CP020114.1_373833_375111_-	pfam14239, RRXRR, RRXRR protein	NA|224aa|up_6|CP020114.1_375569_376241_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|245aa|up_5|CP020114.1_376355_377090_-	pfam09353, DUF1995, Domain of unknown function (DUF1995)	NA|565aa|up_4|CP020114.1_377351_379046_-	NA	NA|66aa|up_3|CP020114.1_379178_379376_-	pfam14239, RRXRR, RRXRR protein	NA|622aa|up_2|CP020114.1_383144_385010_-	pfam13424, TPR_12, Tetratricopeptide repeat	NA|259aa|up_1|CP020114.1_385149_385926_-	pfam03649, UPF0014, Uncharacterized protein family (UPF0014)	NA|249aa|up_0|CP020114.1_387650_388397_-	pfam04481, DUF561, Protein of unknown function (DUF561)	NA|148aa|down_0|CP020114.1_393995_394439_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|87aa|down_1|CP020114.1_394490_394751_-	TIGR00452, methyltransferase_putative, tRNA (mo5U34)-methyltransferase	NA|440aa|down_2|CP020114.1_394770_396090_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|683aa|down_3|CP020114.1_396740_398789_-	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|120aa|down_4|CP020114.1_399550_399910_-	NA	NA|144aa|down_5|CP020114.1_400250_400682_-	NA	NA|203aa|down_6|CP020114.1_407424_408033_-	COG1290, QcrB, Cytochrome b subunit of the bc complex [Energy production and conversion]	NA|231aa|down_7|CP020114.1_408132_408825_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|465aa|down_8|CP020114.1_410932_412327_-	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]	NA|139aa|down_9|CP020114.1_412414_412831_-	pfam00875, DNA_photolyase, DNA photolyase
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	2	725890-726003	2	CRISPRCasFinder	no		c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Orphan	CTACGCCGAAGGCGCATCCCCGAAGGGGTTTAGGGCGATTTA	42	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|236aa|up_6|CP020114.1_704772_705480_-,NA|64aa|up_2|CP020114.1_711491_711683_-,NA|74aa|down_1|CP020114.1_726784_727006_-,NA|102aa|down_7|CP020114.1_757089_757395_-	NA|270aa|up_9|CP020114.1_701350_702160_-	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs	NA|455aa|up_8|CP020114.1_702298_703663_-	TIGR00400, mgtE, Mg2+ transporter (mgtE)	NA|144aa|up_7|CP020114.1_704265_704697_-	COG2194, COG2194, Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]	NA|236aa|up_6|CP020114.1_704772_705480_-	NA	NA|265aa|up_5|CP020114.1_707885_708680_-	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|117aa|up_4|CP020114.1_708751_709102_-	COG1950, COG1950, Predicted membrane protein [Function unknown]	NA|376aa|up_3|CP020114.1_710146_711274_-	cd06164, S2P-M50_SpoIVFB_CBS, SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation	NA|64aa|up_2|CP020114.1_711491_711683_-	NA	NA|721aa|up_1|CP020114.1_720789_722952_-	COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism]	NA|185aa|up_0|CP020114.1_723509_724064_-	COG2340, COG2340, Uncharacterized protein with SCP/PR1 domains [Function unknown]	NA|129aa|down_0|CP020114.1_726071_726458_-	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|74aa|down_1|CP020114.1_726784_727006_-	NA	NA|1272aa|down_2|CP020114.1_727044_730860_-	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA	NA|546aa|down_3|CP020114.1_731142_732780_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|999aa|down_4|CP020114.1_732783_735780_-	COG3202, COG3202, ATP/ADP translocase [Energy production and conversion]	NA|178aa|down_5|CP020114.1_736096_736630_-	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|123aa|down_6|CP020114.1_747106_747475_-	pfam04972, BON, BON domain	NA|102aa|down_7|CP020114.1_757089_757395_-	NA	NA|757aa|down_8|CP020114.1_757657_759928_-	pfam13576, Pentapeptide_3, Pentapeptide repeats (9 copies)	NA|336aa|down_9|CP020114.1_759924_760932_-	cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	4	860769-860869	4	CRISPRCasFinder	no	c2c9_V-U4	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Type V-U4	CCTTCTTAAGGGGGGCTAGGGGGGATCAA	29	0	0	NA	NA	NA	1	1	TypeV-U4	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|249aa|up_9|CP020114.1_837412_838159_-,NA|67aa|down_5|CP020114.1_871896_872097_-,NA|98aa|down_8|CP020114.1_874009_874303_-,NA|81aa|down_9|CP020114.1_874335_874578_-	NA|249aa|up_9|CP020114.1_837412_838159_-	NA	NA|600aa|up_8|CP020114.1_838646_840446_-	cd13868, CuRO_2_CotA_like, The second Cupredoxin domain of bacterial laccases including CotA, a bacterial endospore coat component	NA|113aa|up_7|CP020114.1_843856_844195_-	pfam06616, BsuBI_PstI_RE, BsuBI/PstI restriction endonuclease C-terminus	NA|372aa|up_6|CP020114.1_844184_845300_-	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|347aa|up_5|CP020114.1_845428_846469_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|540aa|up_4|CP020114.1_846503_848123_-	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|342aa|up_3|CP020114.1_848126_849152_-	cd13543, PBP2_Fbp, Substrate binding domain of ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|350aa|up_2|CP020114.1_849302_850352_-	cd13543, PBP2_Fbp, Substrate binding domain of ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|405aa|up_1|CP020114.1_855147_856362_-	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown]	NA|103aa|up_0|CP020114.1_858747_859056_-	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins	NA|696aa|down_0|CP020114.1_862591_864679_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|472aa|down_1|CP020114.1_865336_866752_-	pfam05787, DUF839, Bacterial protein of unknown function (DUF839)	NA|318aa|down_2|CP020114.1_868278_869232_-	PRK07399, PRK07399, DNA polymerase III subunit delta'; Validated	NA|392aa|down_3|CP020114.1_869437_870613_-	smart00933, NurA, NurA nuclease	NA|262aa|down_4|CP020114.1_870941_871727_-	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|67aa|down_5|CP020114.1_871896_872097_-	NA	c2c9_V-U4|367aa|down_6|CP020114.1_872267_873368_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|201aa|down_7|CP020114.1_873351_873954_-	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain	NA|98aa|down_8|CP020114.1_874009_874303_-	NA	NA|81aa|down_9|CP020114.1_874335_874578_-	NA
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	5	952478-953238	1,5,1	PILER-CR,CRISPRCasFinder,CRT	no		c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Orphan	CTTTCCATAACCTCTTCCCCTAACGGGGATGGAAAC,CTTTCCATAACCTCTTCCCCTAACGGGGATGGAAAC,CTTTCCATAACCTCTTCCCCTAACGGGGATGGAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	10,10,10	10	Orphan	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|61aa|up_1|CP020114.1_950622_950805_-,NA|65aa|down_0|CP020114.1_954148_954343_-,NA|105aa|down_1|CP020114.1_954416_954731_-,NA|178aa|down_3|CP020114.1_964299_964833_-,NA|150aa|down_4|CP020114.1_965503_965953_-,NA|61aa|down_9|CP020114.1_976282_976465_-	NA|212aa|up_9|CP020114.1_929394_930030_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|249aa|up_8|CP020114.1_936054_936801_-	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|269aa|up_7|CP020114.1_942137_942944_-	PHA02611, 51, baseplate hub assembly protein; Provisional	NA|291aa|up_6|CP020114.1_943076_943949_-	PRK02755, truB, tRNA pseudouridine synthase B; Provisional	NA|589aa|up_5|CP020114.1_944067_945834_-	COG4188, COG4188, Predicted dienelactone hydrolase [General function prediction only]	NA|306aa|up_4|CP020114.1_946235_947153_-	pfam00892, EamA, EamA-like transporter family	NA|394aa|up_3|CP020114.1_947300_948482_-	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]	NA|679aa|up_2|CP020114.1_948566_950603_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|61aa|up_1|CP020114.1_950622_950805_-	NA	NA|375aa|up_0|CP020114.1_950887_952012_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|65aa|down_0|CP020114.1_954148_954343_-	NA	NA|105aa|down_1|CP020114.1_954416_954731_-	NA	NA|358aa|down_2|CP020114.1_954886_955960_-	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only]	NA|178aa|down_3|CP020114.1_964299_964833_-	NA	NA|150aa|down_4|CP020114.1_965503_965953_-	NA	NA|681aa|down_5|CP020114.1_965994_968037_-	pfam00498, FHA, FHA domain	NA|294aa|down_6|CP020114.1_970914_971796_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|197aa|down_7|CP020114.1_973654_974245_-	pfam02517, Abi, CAAX protease self-immunity	NA|360aa|down_8|CP020114.1_974301_975381_-	pfam11805, DUF3326, Protein of unknown function (DUF3326)	NA|61aa|down_9|CP020114.1_976282_976465_-	NA
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	6	965199-965296	6	CRISPRCasFinder	no		c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Orphan	AAGGCTACCGTGTACACACAAGTC	24	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|61aa|up_5|CP020114.1_950622_950805_-,NA|65aa|up_3|CP020114.1_954148_954343_-,NA|105aa|up_2|CP020114.1_954416_954731_-,NA|178aa|up_0|CP020114.1_964299_964833_-,NA|150aa|down_0|CP020114.1_965503_965953_-,NA|61aa|down_5|CP020114.1_976282_976465_-	NA|589aa|up_9|CP020114.1_944067_945834_-	COG4188, COG4188, Predicted dienelactone hydrolase [General function prediction only]	NA|306aa|up_8|CP020114.1_946235_947153_-	pfam00892, EamA, EamA-like transporter family	NA|394aa|up_7|CP020114.1_947300_948482_-	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]	NA|679aa|up_6|CP020114.1_948566_950603_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|61aa|up_5|CP020114.1_950622_950805_-	NA	NA|375aa|up_4|CP020114.1_950887_952012_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|65aa|up_3|CP020114.1_954148_954343_-	NA	NA|105aa|up_2|CP020114.1_954416_954731_-	NA	NA|358aa|up_1|CP020114.1_954886_955960_-	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only]	NA|178aa|up_0|CP020114.1_964299_964833_-	NA	NA|150aa|down_0|CP020114.1_965503_965953_-	NA	NA|681aa|down_1|CP020114.1_965994_968037_-	pfam00498, FHA, FHA domain	NA|294aa|down_2|CP020114.1_970914_971796_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|197aa|down_3|CP020114.1_973654_974245_-	pfam02517, Abi, CAAX protease self-immunity	NA|360aa|down_4|CP020114.1_974301_975381_-	pfam11805, DUF3326, Protein of unknown function (DUF3326)	NA|61aa|down_5|CP020114.1_976282_976465_-	NA	NA|106aa|down_6|CP020114.1_976682_977000_-	TIGR02008, Ferredoxin_root_R-B1, ferredoxin [2Fe-2S]	NA|612aa|down_7|CP020114.1_981434_983270_-	TIGR01243, Cell_division_cycle_protein_48_homolog_MJ1156, AAA family ATPase, CDC48 subfamily	NA|628aa|down_8|CP020114.1_983337_985221_-	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|227aa|down_9|CP020114.1_985263_985944_-	pfam06386, GvpL_GvpF, Gas vesicle synthesis protein GvpL/GvpF
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	8	1521840-1521967	8	CRISPRCasFinder	no		c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Orphan	CGCGGTAAGCGAAGCTATGCCGTAGGCTTTACGTG	35	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|70aa|up_8|CP020114.1_1511065_1511275_-,NA|226aa|up_3|CP020114.1_1516271_1516949_-,NA|64aa|up_2|CP020114.1_1517107_1517299_-,NA|115aa|up_0|CP020114.1_1518192_1518537_-,NA|95aa|down_3|CP020114.1_1543342_1543627_-,NA|103aa|down_4|CP020114.1_1543614_1543923_-	NA|428aa|up_9|CP020114.1_1509218_1510502_-	PRK09440, avtA, valine--pyruvate transaminase; Provisional	NA|70aa|up_8|CP020114.1_1511065_1511275_-	NA	NA|90aa|up_7|CP020114.1_1511320_1511590_-	NF033474, DivGenRetAVD, diversity-generating retroelement protein Avd	NA|505aa|up_6|CP020114.1_1511701_1513216_-	COG1262, COG1262, Uncharacterized conserved protein [Function unknown]	NA|352aa|up_5|CP020114.1_1514145_1515201_-	COG3825, COG3825, Uncharacterized protein conserved in bacteria [Function unknown]	NA|318aa|up_4|CP020114.1_1515197_1516151_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|226aa|up_3|CP020114.1_1516271_1516949_-	NA	NA|64aa|up_2|CP020114.1_1517107_1517299_-	NA	NA|290aa|up_1|CP020114.1_1517323_1518193_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|115aa|up_0|CP020114.1_1518192_1518537_-	NA	NA|957aa|down_0|CP020114.1_1528272_1531143_-	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|367aa|down_1|CP020114.1_1537610_1538711_-	COG2082, CobH, Precorrin isomerase [Coenzyme metabolism]	NA|515aa|down_2|CP020114.1_1538746_1540291_-	pfam14264, Glucos_trans_II, Glucosyl transferase GtrII	NA|95aa|down_3|CP020114.1_1543342_1543627_-	NA	NA|103aa|down_4|CP020114.1_1543614_1543923_-	NA	NA|965aa|down_5|CP020114.1_1545287_1548182_-	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion]	NA|260aa|down_6|CP020114.1_1553055_1553835_-	pfam13483, Lactamase_B_3, Beta-lactamase superfamily domain	NA|216aa|down_7|CP020114.1_1553916_1554564_-	pfam14103, DUF4276, Domain of unknown function (DUF4276)	NA|431aa|down_8|CP020114.1_1554568_1555861_-	COG4637, COG4637, Predicted ATPase [General function prediction only]	NA|129aa|down_9|CP020114.1_1556208_1556595_-	cd00781, ketosteroid_isomerase, ketosteroid isomerase: Many biological reactions proceed by enzymatic cleavage of a C-H bond adjacent to carbonyl or a carboxyl group, leading to an enol or a enolate intermediate that is subsequently re-protonated at the same or an adjacent carbon
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	9	1986659-1986771	9	CRISPRCasFinder	no		c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Orphan	CCTCTTGTCCCCCCTGCACCCTGCACCCTGCCCCCTGC	38	1	10	1986697-1986733|1986697-1986733|1986697-1986733|1986697-1986733|1986697-1986733|1986697-1986733|1986697-1986733|1986697-1986733|1986697-1986733|1986697-1986733	CP020114.1_970767-970803|CP020114.1_970843-970879|CP020114.1_970729-970765|CP020114.1_970805-970841|CP020114.1_1323736-1323772|CP020114.1_3205368-3205404|CP020114.1_3205406-3205442|CP020114.1_3205444-3205480|CP020114.1_3205482-3205518|CP020114.1_3205520-3205556	NA	1	1	Orphan	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|165aa|up_9|CP020114.1_1957106_1957601_-,NA|203aa|up_1|CP020114.1_1983655_1984264_-,NA|61aa|down_1|CP020114.1_1990087_1990270_-	NA|165aa|up_9|CP020114.1_1957106_1957601_-	NA	NA|401aa|up_8|CP020114.1_1957703_1958906_-	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed	NA|307aa|up_7|CP020114.1_1962231_1963152_-	COG4240, COG4240, Predicted kinase [General function prediction only]	NA|111aa|up_6|CP020114.1_1963154_1963487_-	pfam04483, DUF565, Protein of unknown function (DUF565)	NA|1204aa|up_5|CP020114.1_1966604_1970216_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|343aa|up_4|CP020114.1_1971640_1972669_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|528aa|up_3|CP020114.1_1978889_1980473_-	pfam00931, NB-ARC, NB-ARC domain	NA|820aa|up_2|CP020114.1_1980564_1983024_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|203aa|up_1|CP020114.1_1983655_1984264_-	NA	NA|422aa|up_0|CP020114.1_1984474_1985740_-	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|415aa|down_0|CP020114.1_1986829_1988074_-	PLN00049, PLN00049, carboxyl-terminal processing protease; Provisional	NA|61aa|down_1|CP020114.1_1990087_1990270_-	NA	NA|287aa|down_2|CP020114.1_1992907_1993768_-	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|134aa|down_3|CP020114.1_1994117_1994519_-	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription]	NA|100aa|down_4|CP020114.1_1994502_1994802_-	pfam09907, HigB_toxin, HigB_toxin, RelE-like toxic component of a toxin-antitoxin system	NA|877aa|down_5|CP020114.1_1995025_1997656_-	PRK09532, PRK09532, DNA polymerase III subunit alpha; Reviewed	NA|1289aa|down_6|CP020114.1_1997943_2001810_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|122aa|down_7|CP020114.1_2008382_2008748_-	pfam09996, DUF2237, Uncharacterized protein conserved in bacteria (DUF2237)	NA|237aa|down_8|CP020114.1_2008787_2009498_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|306aa|down_9|CP020114.1_2009855_2010773_-	PRK02649, ppnK, NAD(+) kinase
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	10	2515639-2515717	10	CRISPRCasFinder	no		c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Orphan	AAATCATAGTCAAATCATAGTCAAAAA	27	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|179aa|up_5|CP020114.1_2508663_2509200_-,NA|284aa|up_2|CP020114.1_2512309_2513161_-,NA|220aa|up_1|CP020114.1_2513299_2513959_-,NA|263aa|down_1|CP020114.1_2518070_2518859_-	NA|223aa|up_9|CP020114.1_2502920_2503589_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|357aa|up_8|CP020114.1_2504505_2505576_-	sd00006, TPR, Tetratricopeptide repeat	NA|236aa|up_7|CP020114.1_2505716_2506424_-	pfam04452, Methyltrans_RNA, RNA methyltransferase	NA|640aa|up_6|CP020114.1_2506525_2508445_-	TIGR02042, Sulfite_reductase, ferredoxin-sulfite reductase	NA|179aa|up_5|CP020114.1_2508663_2509200_-	NA	NA|109aa|up_4|CP020114.1_2510961_2511288_-	pfam03091, CutA1, CutA1 divalent ion tolerance protein	NA|333aa|up_3|CP020114.1_2511293_2512292_-	cd00569, HTH_Hin_like, Helix-turn-helix domain of Hin and related proteins	NA|284aa|up_2|CP020114.1_2512309_2513161_-	NA	NA|220aa|up_1|CP020114.1_2513299_2513959_-	NA	NA|389aa|up_0|CP020114.1_2514438_2515605_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|607aa|down_0|CP020114.1_2516162_2517983_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|263aa|down_1|CP020114.1_2518070_2518859_-	NA	NA|136aa|down_2|CP020114.1_2518864_2519272_-	pfam06228, ChuX_HutX, Haem utilisation ChuX/HutX	NA|318aa|down_3|CP020114.1_2519560_2520514_-	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|153aa|down_4|CP020114.1_2520647_2521106_-	COG1837, COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only]	NA|87aa|down_5|CP020114.1_2521068_2521329_-	CHL00005, rps16, ribosomal protein S16	NA|491aa|down_6|CP020114.1_2521446_2522919_-	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|452aa|down_7|CP020114.1_2523711_2525067_-	cd01087, Prolidase, Prolidase	NA|205aa|down_8|CP020114.1_2526508_2527123_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|474aa|down_9|CP020114.1_2539229_2540651_-	PRK07362, PRK07362, NADP-dependent isocitrate dehydrogenase
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	11	2651429-2651528	11	CRISPRCasFinder	no		c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Orphan	ATCTCCCATTCCTGCATTAGAACCAGAG	28	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|67aa|up_4|CP020114.1_2643082_2643283_-,NA	NA|366aa|up_9|CP020114.1_2629789_2630887_-	pfam14249, Tocopherol_cycl, Tocopherol cyclase	NA|278aa|up_8|CP020114.1_2633296_2634130_-	COG1408, COG1408, Predicted phosphohydrolases [General function prediction only]	NA|277aa|up_7|CP020114.1_2634228_2635059_-	COG1408, COG1408, Predicted phosphohydrolases [General function prediction only]	NA|257aa|up_6|CP020114.1_2635124_2635895_-	COG1496, yfiH, Multicopper polyphenol oxidase (laccase) [Secondary metabolites biosynthesis, transport and catabolism]	NA|221aa|up_5|CP020114.1_2639053_2639716_-	PRK09289, PRK09289, riboflavin synthase	NA|67aa|up_4|CP020114.1_2643082_2643283_-	NA	NA|400aa|up_3|CP020114.1_2644284_2645484_-	cd13661, PBP2_PotD_PotF_like_1, The periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold	NA|371aa|up_2|CP020114.1_2646479_2647592_-	PRK04447, PRK04447, hypothetical protein; Provisional	NA|242aa|up_1|CP020114.1_2647596_2648322_-	COG4241, COG4241, Predicted membrane protein [Function unknown]	NA|234aa|up_0|CP020114.1_2648399_2649101_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|276aa|down_0|CP020114.1_2654304_2655132_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|182aa|down_1|CP020114.1_2655151_2655697_-	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|315aa|down_2|CP020114.1_2655791_2656736_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|250aa|down_3|CP020114.1_2656759_2657509_-	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]	NA|261aa|down_4|CP020114.1_2657900_2658683_-	TIGR03022, WbaP_sugtrans, Undecaprenyl-phosphate galactose phosphotransferase, WbaP	NA|382aa|down_5|CP020114.1_2658792_2659938_-	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins	NA|172aa|down_6|CP020114.1_2663433_2663949_-	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|188aa|down_7|CP020114.1_2663945_2664509_-	pfam05685, Uma2, Putative restriction endonuclease	NA|91aa|down_8|CP020114.1_2670749_2671022_-	PRK07394, PRK07394, hypothetical protein; Provisional	NA|190aa|down_9|CP020114.1_2671002_2671572_-	COG0583, LysR, Transcriptional regulator [Transcription]
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	12	4035453-4037321	12,2,2	CRISPRCasFinder,CRT,PILER-CR	no	WYL,cas2,cas1,csm6,cas6,csm5gr7	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Type III-A	GTTTCCGTCCCCTTGCGGGGAAATGGTTATGAAAAAC,GTTTCCGTCCCCTTGCGGGGAAATGGTTATGAAAAAC,GTTTCCGTCCCCTTGCGGGGAAATGGTTATGAAAAAC	37,37,37	0	0	NA	NA	NA:NA:NA	24,24,23	24	TypeIII-A	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|102aa|up_0|CP020114.1_4035043_4035349_-,NA	NA|1135aa|up_9|CP020114.1_4017138_4020543_-	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family	NA|848aa|up_8|CP020114.1_4020684_4023228_-	pfam00350, Dynamin_N, Dynamin family	NA|448aa|up_7|CP020114.1_4024806_4026150_-	pfam10011, DUF2254, Predicted membrane protein (DUF2254)	NA|336aa|up_6|CP020114.1_4026146_4027154_-	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	WYL|481aa|up_5|CP020114.1_4027937_4029380_-	TIGR03985, hypothetical_protein_sll7078, CRISPR-associated protein, TIGR03985 family	NA|501aa|up_4|CP020114.1_4030032_4031535_-	pfam00226, DnaJ, DnaJ domain	NA|579aa|up_3|CP020114.1_4031548_4033285_-	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family	NA|269aa|up_2|CP020114.1_4033449_4034256_-	COG0576, GrpE, Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|108aa|up_1|CP020114.1_4034663_4034987_-	cd09872, PIN_Sll0205-like, VapC-like PIN domain of Sll0205 protein and homologs	NA|102aa|up_0|CP020114.1_4035043_4035349_-	NA	cas2|95aa|down_0|CP020114.1_4037653_4037938_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|337aa|down_1|CP020114.1_4037934_4038945_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	NA|201aa|down_2|CP020114.1_4052817_4053420_-	pfam05685, Uma2, Putative restriction endonuclease	csm6|378aa|down_3|CP020114.1_4053748_4054882_-	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	cas6|253aa|down_4|CP020114.1_4054921_4055680_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm5gr7|429aa|down_5|CP020114.1_4055685_4056972_-	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csm4gr5|361aa|down_6|CP020114.1_4056955_4058038_-	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4	csm3gr7|326aa|down_7|CP020114.1_4058034_4059012_-	TIGR02582, CRISPR_type_III-associated_RAMP_protein_Csm3, CRISPR type III-A/MTUBE-associated RAMP protein Csm3	csm2gr11|184aa|down_8|CP020114.1_4059014_4059566_-	pfam03750, Csm2_III-A, Csm2 Type III-A	cas10|764aa|down_9|CP020114.1_4059568_4061860_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	13	4039199-4039298	13	CRISPRCasFinder	no	WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Type III-A	CCCAGCCCCTCTCCTTGGTAAGGAGAG	27	0	0	NA	NA	NA	1	1	TypeIII-A	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|102aa|up_2|CP020114.1_4035043_4035349_-,NA	NA|448aa|up_9|CP020114.1_4024806_4026150_-	pfam10011, DUF2254, Predicted membrane protein (DUF2254)	NA|336aa|up_8|CP020114.1_4026146_4027154_-	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	WYL|481aa|up_7|CP020114.1_4027937_4029380_-	TIGR03985, hypothetical_protein_sll7078, CRISPR-associated protein, TIGR03985 family	NA|501aa|up_6|CP020114.1_4030032_4031535_-	pfam00226, DnaJ, DnaJ domain	NA|579aa|up_5|CP020114.1_4031548_4033285_-	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family	NA|269aa|up_4|CP020114.1_4033449_4034256_-	COG0576, GrpE, Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|108aa|up_3|CP020114.1_4034663_4034987_-	cd09872, PIN_Sll0205-like, VapC-like PIN domain of Sll0205 protein and homologs	NA|102aa|up_2|CP020114.1_4035043_4035349_-	NA	cas2|95aa|up_1|CP020114.1_4037653_4037938_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|337aa|up_0|CP020114.1_4037934_4038945_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	NA|201aa|down_0|CP020114.1_4052817_4053420_-	pfam05685, Uma2, Putative restriction endonuclease	csm6|378aa|down_1|CP020114.1_4053748_4054882_-	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	cas6|253aa|down_2|CP020114.1_4054921_4055680_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm5gr7|429aa|down_3|CP020114.1_4055685_4056972_-	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csm4gr5|361aa|down_4|CP020114.1_4056955_4058038_-	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4	csm3gr7|326aa|down_5|CP020114.1_4058034_4059012_-	TIGR02582, CRISPR_type_III-associated_RAMP_protein_Csm3, CRISPR type III-A/MTUBE-associated RAMP protein Csm3	csm2gr11|184aa|down_6|CP020114.1_4059014_4059566_-	pfam03750, Csm2_III-A, Csm2 Type III-A	cas10|764aa|down_7|CP020114.1_4059568_4061860_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csx3|102aa|down_8|CP020114.1_4062125_4062431_-	cd09740, Csx3_III-U, CRISPR/Cas system-associated protein Csx3	NA|116aa|down_9|CP020114.1_4066573_4066921_-	COG2452, COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	14	4154495-4154587	14	CRISPRCasFinder	no	cas6	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Unclear	AAGGAGAGGGGAGAATTTCAGAAA	24	1	2	4154519-4154563|4154519-4154563	CP020114.1_1075330-1075374|CP020114.1_5068517-5068473	NA	1	1	Unclear	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|64aa|up_9|CP020114.1_4131820_4132012_-,NA|195aa|up_0|CP020114.1_4153119_4153704_-,NA|119aa|down_0|CP020114.1_4154636_4154993_-,NA|497aa|down_6|CP020114.1_4159266_4160757_-	NA|64aa|up_9|CP020114.1_4131820_4132012_-	NA	NA|258aa|up_8|CP020114.1_4132120_4132894_-	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional	NA|463aa|up_7|CP020114.1_4135210_4136599_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|486aa|up_6|CP020114.1_4136744_4138202_-	PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed	NA|271aa|up_5|CP020114.1_4138402_4139215_-	TIGR01548, Imidazoleglycerol-phosphate_dehydratase, haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548	NA|474aa|up_4|CP020114.1_4143953_4145375_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|337aa|up_3|CP020114.1_4145503_4146514_-	PLN02389, PLN02389, biotin synthase	NA|964aa|up_2|CP020114.1_4147343_4150235_-	PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated	NA|341aa|up_1|CP020114.1_4151798_4152821_-	sd00006, TPR, Tetratricopeptide repeat	NA|195aa|up_0|CP020114.1_4153119_4153704_-	NA	NA|119aa|down_0|CP020114.1_4154636_4154993_-	NA	NA|61aa|down_1|CP020114.1_4155065_4155248_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|237aa|down_2|CP020114.1_4155480_4156191_-	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|345aa|down_3|CP020114.1_4156248_4157283_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	cas6|382aa|down_4|CP020114.1_4157433_4158579_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|112aa|down_5|CP020114.1_4158732_4159068_-	cd16383, GUN4, porphyrin-binding protein domain GUN4	NA|497aa|down_6|CP020114.1_4159266_4160757_-	NA	NA|131aa|down_7|CP020114.1_4161258_4161651_-	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|75aa|down_8|CP020114.1_4161647_4161872_-	TIGR02609, hypothetical_protein_XAC1195, putative addiction module antidote	NA|213aa|down_9|CP020114.1_4162007_4162646_-	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain
GCA_003054475.1_ASM305447v1	CP020114	Nodularia spumigena UHCC 0039 chromosome, complete genome	15	4979869-4980088	3	CRT	no		c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3	Orphan	GAAATTTCCCTTAAGAATGAGAATAGTGATTGTC	34	0	0	NA	NA	NA	3	3	Orphan	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|125aa|up_8|CP020114.1_4941819_4942194_-,NA|179aa|up_7|CP020114.1_4942197_4942734_-,NA|338aa|up_1|CP020114.1_4970102_4971116_-,NA|104aa|down_0|CP020114.1_4980781_4981093_-	NA|114aa|up_9|CP020114.1_4936385_4936727_-	COG3655, COG3655, Predicted transcriptional regulator [Transcription]	NA|125aa|up_8|CP020114.1_4941819_4942194_-	NA	NA|179aa|up_7|CP020114.1_4942197_4942734_-	NA	NA|144aa|up_6|CP020114.1_4942746_4943178_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|160aa|up_5|CP020114.1_4948522_4949002_-	PRK05949, PRK05949, RNA polymerase sigma factor; Validated	NA|311aa|up_4|CP020114.1_4949309_4950242_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|228aa|up_3|CP020114.1_4952001_4952685_-	cd05233, SDR_c, classical (c) SDRs	NA|891aa|up_2|CP020114.1_4959390_4962063_-	pfam16313, DUF4953, Met-zincin	NA|338aa|up_1|CP020114.1_4970102_4971116_-	NA	NA|613aa|up_0|CP020114.1_4971626_4973465_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|104aa|down_0|CP020114.1_4980781_4981093_-	NA	NA|157aa|down_1|CP020114.1_4981301_4981772_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|504aa|down_2|CP020114.1_4982369_4983881_-	COG3349, COG3349, Uncharacterized conserved protein [Function unknown]	NA|619aa|down_3|CP020114.1_4983959_4985816_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|152aa|down_4|CP020114.1_4991480_4991936_-	pfam01475, FUR, Ferric uptake regulator family	NA|417aa|down_5|CP020114.1_4993634_4994885_-	PRK07598, PRK07598, RNA polymerase sigma factor SigC; Validated	NA|311aa|down_6|CP020114.1_4995343_4996276_-	PRK14619, PRK14619, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional	NA|301aa|down_7|CP020114.1_4996292_4997195_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|174aa|down_8|CP020114.1_5003937_5004459_-	pfam11320, DUF3122, Protein of unknown function (DUF3122)	NA|70aa|down_9|CP020114.1_5004800_5005010_-	pfam01124, MAPEG, MAPEG family
GCA_003054475.1_ASM305447v1	CP020115	Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence	1	36321-36903	1	CRT	no	Cas14u_CAS-V,RT	Cas14u_CAS-V,RT	Unclear	GAAATTTCCCTTAAGAATGAGAATAGTG	28	0	0	NA	NA	NA	9	9	Unclear	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|258aa|up_9|CP020115.1_1823_2597_-,NA|68aa|up_8|CP020115.1_3393_3597_-,NA|104aa|down_0|CP020115.1_37602_37914_-,NA|73aa|down_4|CP020115.1_45486_45705_-,NA|170aa|down_9|CP020115.1_58007_58517_-	NA|258aa|up_9|CP020115.1_1823_2597_-	NA	NA|68aa|up_8|CP020115.1_3393_3597_-	NA	NA|399aa|up_7|CP020115.1_5244_6441_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|395aa|up_6|CP020115.1_9440_10625_-	cd17774, CBS_two-component_sensor_histidine_kinase_repeat2, 2 tandem repeats of the CBS domain in the two-component sensor histidine kinase and related-proteins, repeat 2	NA|114aa|up_5|CP020115.1_10868_11210_-	pfam07508, Recombinase, Recombinase	NA|343aa|up_4|CP020115.1_15395_16424_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|188aa|up_3|CP020115.1_17576_18140_-	cd05233, SDR_c, classical (c) SDRs	Cas14u_CAS-V|125aa|up_2|CP020115.1_18148_18523_-	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|340aa|up_1|CP020115.1_25511_26531_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|616aa|up_0|CP020115.1_26563_28411_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|104aa|down_0|CP020115.1_37602_37914_-	NA	NA|282aa|down_1|CP020115.1_39111_39957_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	RT|402aa|down_2|CP020115.1_42294_43500_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|132aa|down_3|CP020115.1_44231_44627_-	pfam07924, NuiA, Nuclease A inhibitor-like protein	NA|73aa|down_4|CP020115.1_45486_45705_-	NA	NA|461aa|down_5|CP020115.1_49907_51290_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|231aa|down_6|CP020115.1_53423_54116_-	pfam10592, AIPR, AIPR protein	NA|732aa|down_7|CP020115.1_54267_56463_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|413aa|down_8|CP020115.1_56753_57992_-	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|170aa|down_9|CP020115.1_58007_58517_-	NA
GCA_003054475.1_ASM305447v1	CP020115	Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence	2	45845-46095	1	CRISPRCasFinder	no	RT	Cas14u_CAS-V,RT	Unclear	TTTCCCTTAAGAATTTTCTGGGG	23	0	0	NA	NA	NA	4	4	Orphan	c2c9_V-U4,cas14j,Cas9_archaeal,cas14k,csa3,PD-DExK,RT,DinG,Cas14c_CAS-V-F,2OG_CAS,WYL,cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx3,Cas14u_CAS-V	NA|104aa|up_4|CP020115.1_37602_37914_-,NA|73aa|up_0|CP020115.1_45486_45705_-,NA|170aa|down_4|CP020115.1_58007_58517_-,NA|188aa|down_5|CP020115.1_61505_62069_-,NA|264aa|down_7|CP020115.1_67381_68173_-,NA|99aa|down_8|CP020115.1_73079_73376_-	NA|343aa|up_9|CP020115.1_15395_16424_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|188aa|up_8|CP020115.1_17576_18140_-	cd05233, SDR_c, classical (c) SDRs	Cas14u_CAS-V|125aa|up_7|CP020115.1_18148_18523_-	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|340aa|up_6|CP020115.1_25511_26531_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|616aa|up_5|CP020115.1_26563_28411_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|104aa|up_4|CP020115.1_37602_37914_-	NA	NA|282aa|up_3|CP020115.1_39111_39957_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	RT|402aa|up_2|CP020115.1_42294_43500_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|132aa|up_1|CP020115.1_44231_44627_-	pfam07924, NuiA, Nuclease A inhibitor-like protein	NA|73aa|up_0|CP020115.1_45486_45705_-	NA	NA|461aa|down_0|CP020115.1_49907_51290_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|231aa|down_1|CP020115.1_53423_54116_-	pfam10592, AIPR, AIPR protein	NA|732aa|down_2|CP020115.1_54267_56463_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|413aa|down_3|CP020115.1_56753_57992_-	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|170aa|down_4|CP020115.1_58007_58517_-	NA	NA|188aa|down_5|CP020115.1_61505_62069_-	NA	NA|343aa|down_6|CP020115.1_65350_66379_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|264aa|down_7|CP020115.1_67381_68173_-	NA	NA|99aa|down_8|CP020115.1_73079_73376_-	NA	NA|314aa|down_9|CP020115.1_73482_74424_-	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins
