The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	7549	59766	4735208	transposase,protease	Acidithiobacillus_phage(16.67%)	38	NA	NA
AVT97614.1|7549_8386_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AVT97615.1|8570_9377_+	M48 family peptidase	NA	NA	NA	NA	NA
AVT97616.1|9653_10847_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AVT97617.1|11000_11669_+	energy transducer TonB	NA	NA	NA	NA	NA
AVT97618.1|11753_12515_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AVT97619.1|12561_12984_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AVT97620.1|12987_13401_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AVT97621.1|13696_14464_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AVT97622.1|14474_14744_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97623.1|14818_16279_-	cardiolipin synthase	NA	NA	NA	NA	NA
AVT97624.1|17424_18801_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	54.1	1.9e-76
AVT97625.1|19029_19998_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
AVT97626.1|20086_21214_-	radical SAM protein	NA	NA	NA	NA	NA
AVT97627.1|22284_23625_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97628.1|23842_24535_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
AVT97629.1|24651_24972_+	DUF1820 domain-containing protein	NA	NA	NA	NA	NA
AVT97630.1|26269_27793_-	PDZ domain-containing protein	NA	A0A0R6PIZ1	Moraxella_phage	29.2	1.0e-25
AVT97631.1|27897_29133_-	peptidase M23	NA	NA	NA	NA	NA
AVT97632.1|29293_29950_+	hypothetical protein	NA	NA	NA	NA	NA
AVT97633.1|30112_31924_+	aminopeptidase	NA	NA	NA	NA	NA
AVT97634.1|32071_32422_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
AVT97635.1|32728_33859_-	cellulase	NA	NA	NA	NA	NA
AVT97636.1|34641_35694_-	cellulase	NA	NA	NA	NA	NA
AVT97637.1|36394_37468_-	cellulase	NA	NA	NA	NA	NA
AVT97638.1|37584_37791_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97639.1|37776_38835_+	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	45.7	3.9e-77
AVT97640.1|41242_41872_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97641.1|41894_42953_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	1.4e-74
AVT97642.1|43034_44516_-	glutamate synthase small subunit	NA	NA	NA	NA	NA
AVT97643.1|44710_49183_-	glutamate synthase large subunit	NA	NA	NA	NA	NA
AVT97644.1|49384_49765_-	Elastase inhibitor AFLEI Flags: Precursor	NA	NA	NA	NA	NA
AVT97645.1|49911_51099_+	DNA topoisomerase	NA	A0A0U2TSJ7	Niemeyer_virus	35.3	1.3e-41
AVT97646.1|51301_51607_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00899.1|52793_53933_+	saccharopine dehydrogenase	NA	NA	NA	NA	NA
AVT97647.1|54246_55032_-	DUF1868 domain-containing protein	NA	NA	NA	NA	NA
AVT97648.1|55042_57631_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AVT97649.1|57803_58961_+	ROK family protein	NA	NA	NA	NA	NA
AVT97650.1|59003_59766_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	486729	611586	4735208	tRNA,head,transposase,terminase,plate,integrase,capsid,portal,holin,tail	Stenotrophomonas_phage(40.38%)	100	512345:512389	556856:556900
AVT97956.1|486729_487293_-|tRNA	tRNA threonylcarbamoyladenosine biosynthesis protein RimN	tRNA	NA	NA	NA	NA
AVT97957.1|487303_489796_-	DNA topoisomerase I	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	35.3	1.9e-114
AVT97958.1|489978_491253_-	RDD family protein	NA	NA	NA	NA	NA
AVT97959.1|492067_492541_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97960.1|492583_493726_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
AVT97961.1|493797_494934_-	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	57.1	1.7e-09
AVT97962.1|495066_495579_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.0	2.6e-18
AVT97963.1|495972_496896_+|tRNA	methionyl-tRNA formyltransferase	tRNA	NA	NA	NA	NA
AVT97964.1|496895_498209_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
AVT97965.1|498259_499981_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
AVT97966.1|500145_501423_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
AVT97967.1|501620_502445_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AVT97968.1|502445_503504_+	CDP-glycerol glycerophosphotransferase	NA	NA	NA	NA	NA
AVT97969.1|503670_505176_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00943.1|505172_505682_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97970.1|505791_506925_-	GTP cyclohydrolase II RibA	NA	A0A2H4PQS2	Staphylococcus_phage	44.2	6.1e-28
AVT97971.1|507167_507689_+	N-acetyltransferase	NA	NA	NA	NA	NA
AVT97972.1|507887_508802_-	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA	NA
AVT97973.1|508902_509343_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
AVT97974.1|509451_511326_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	35.5	1.8e-37
AVT97975.1|511518_511839_+	hypothetical protein	NA	NA	NA	NA	NA
512345:512389	attL	CTCATAATCCTTTGGTTGAAGGTTCGAATCCTTCTGGGCCCACCA	NA	NA	NA	NA
AVT97976.1|512458_513733_-|integrase	integrase	integrase	V9IQN0	Stenotrophomonas_phage	50.5	1.1e-110
AVT97977.1|513645_513909_-	hypothetical protein	NA	V9IQX6	Stenotrophomonas_phage	71.4	7.2e-17
AVT97978.1|513866_514073_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97979.1|514069_514342_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00944.1|514338_514584_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97980.1|514580_514856_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97981.1|515017_515428_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97982.1|515653_515932_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97983.1|515928_516147_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00945.1|516455_519128_-	bifunctional DNA primase/helicase	NA	V9IQW5	Stenotrophomonas_phage	69.7	0.0e+00
AVT97984.1|519161_519374_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97985.1|519370_519649_-	hypothetical protein	NA	NA	NA	NA	NA
AVT97986.1|519659_519980_-	hypothetical protein	NA	V9IQW3	Stenotrophomonas_phage	56.5	6.3e-23
AVT97987.1|519982_520240_-	DNA-binding protein	NA	A0A2H4JE67	uncultured_Caudovirales_phage	46.4	6.6e-07
AVT97988.1|520311_520749_+	transcriptional regulator	NA	E5E3P4	Burkholderia_phage	32.0	5.4e-09
AVT97989.1|521409_522396_-	late control protein	NA	V9IQM7	Stenotrophomonas_phage	54.8	2.5e-94
AVT97990.1|522392_522794_-	oxidoreductase	NA	V9IQX3	Stenotrophomonas_phage	62.3	6.0e-39
AVT97991.1|522806_525677_-|tail	phage tail tape measure protein	tail	V9IQL1	Stenotrophomonas_phage	47.5	6.2e-194
AVT97992.1|525709_525823_-|tail	GpE family phage tail protein	tail	A0A0M4R2P3	Salmonella_phage	68.6	4.2e-06
AVT97993.1|525831_526134_-|tail	phage tail assembly protein	tail	A4PE51	Ralstonia_virus	62.6	6.3e-25
AVT97994.1|526179_526689_-|tail	phage major tail tube protein	tail	V9IQX1	Stenotrophomonas_phage	79.9	1.8e-72
AVT97995.1|526719_527886_-|tail	phage tail protein	tail	E5FFG9	Burkholderia_phage	62.4	4.6e-132
AVT97996.1|527897_528257_-|plate	baseplate assembly protein	plate	V9IQW0	Stenotrophomonas_phage	66.1	4.3e-36
AVT97997.1|528253_528817_-|plate	phage baseplate assembly protein V	plate	Q9ZXL0	Pseudomonas_virus	43.7	3.1e-25
AVT97998.1|528877_529456_-|tail	phage tail protein	tail	NA	NA	NA	NA
AVT97999.1|529463_530969_-	hypothetical protein	NA	V9IQX0	Stenotrophomonas_phage	47.0	2.1e-52
AVT98000.1|530978_531524_-|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	54.7	3.5e-50
AVT98001.1|531516_532407_-|plate	baseplate assembly protein	plate	V9IQV9	Stenotrophomonas_phage	53.7	7.2e-85
AVT98002.1|532488_532938_-	phage virion morphogenesis protein	NA	V9IQH0	Stenotrophomonas_phage	54.7	1.8e-36
AVT98003.1|532925_533345_-|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	65.2	2.0e-40
AVT98004.1|533341_533830_-	hypothetical protein	NA	A0A1S5NQ26	Burkholderia_phage	52.8	4.2e-26
AVT98005.1|533829_534471_-	lysozyme	NA	V9IQK6	Stenotrophomonas_phage	60.9	7.9e-49
AVT98006.1|534467_534743_-|holin	phage holin family protein	holin	V9IQV8	Stenotrophomonas_phage	59.8	3.0e-21
AVT98007.1|534735_535092_-	hypothetical protein	NA	V9IQG9	Stenotrophomonas_phage	56.1	4.5e-22
AVT98008.1|535096_535306_-|tail	phage tail protein	tail	K4PAW7	Burkholderia_phage	59.4	5.4e-15
AVT98009.1|535305_535773_-|head	head completion/stabilization protein	head	V9IQW6	Stenotrophomonas_phage	49.7	9.2e-31
AVT98010.1|535872_536592_-|terminase	terminase	terminase	Q9ZXM2	Pseudomonas_virus	63.4	2.0e-69
AVT98011.1|536595_537615_-|capsid	phage major capsid protein, P2 family	capsid	Q9ZXM3	Pseudomonas_virus	70.9	2.1e-136
AVT98012.1|537661_538504_-|capsid	phage capsid protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	52.6	1.7e-67
AVT98013.1|538625_540410_+|terminase	terminase	terminase	V9IQL5	Stenotrophomonas_phage	75.1	1.2e-267
AVT98014.1|540409_541429_+|portal	phage portal protein	portal	A0A2H4J922	uncultured_Caudovirales_phage	72.5	4.1e-140
AVT98015.1|541449_541680_+	Com family DNA-binding transcriptional regulator	NA	V9IQK2	Stenotrophomonas_phage	54.8	1.9e-13
AVT98016.1|541612_542317_+	site-specific DNA-methyltransferase	NA	V9IQV5	Stenotrophomonas_phage	77.8	3.3e-109
AVT98017.1|542348_542816_-	DUF4411 domain-containing protein	NA	NA	NA	NA	NA
AVT98018.1|542815_543994_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
AVT98019.1|544724_547484_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.3	1.8e-41
AVT98020.1|547492_548419_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AVT98021.1|548415_551250_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98022.1|551277_552009_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98023.1|552035_553958_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98024.1|554063_555440_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
AVT98025.1|556967_557201_-	hypothetical protein	NA	V9IQN0	Stenotrophomonas_phage	53.1	4.1e-16
556856:556900	attR	CTCATAATCCTTTGGTTGAAGGTTCGAATCCTTCTGGGCCCACCA	NA	NA	NA	NA
AVT98026.1|559077_560967_-	transcription termination factor Rho	NA	NA	NA	NA	NA
AVT98027.1|561183_561525_-	thioredoxin TrxA	NA	A0A1J0GW78	Streptomyces_phage	44.4	2.3e-15
AVT98028.1|561723_563448_+	ATP-dependent RNA helicase RhlB	NA	A0A1V0SBR7	Catovirus	29.4	1.4e-47
AVT98029.1|563523_564210_+	cell division ATP-binding protein FtsE	NA	NA	NA	NA	NA
AVT98030.1|564206_565157_+	ABC transporter permease	NA	NA	NA	NA	NA
AVU00946.1|565220_566015_+	response regulator	NA	NA	NA	NA	NA
AVT98031.1|566011_566737_+	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	44.3	3.6e-50
AVT98032.1|566953_567829_+	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	39.5	3.6e-44
AVT98033.1|567907_568468_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98034.1|568520_569813_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AVT98035.1|572104_572392_+	co-chaperone GroES	NA	A0A221S331	uncultured_virus	40.0	5.1e-16
AVT98036.1|572528_574169_+	molecular chaperone GroEL	NA	A0A2I7SAK5	Vibrio_phage	63.5	5.1e-177
AVT98037.1|574471_576748_-	type III secretion system effector protein	NA	NA	NA	NA	NA
AVT98038.1|577855_578824_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	3.0e-100
AVT98039.1|581950_583024_+	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	47.9	4.3e-84
AVT98040.1|583540_585718_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98041.1|589409_589928_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98042.1|590089_592915_+	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA	NA
AVT98043.1|593010_593571_-	hypothetical protein	NA	A0A2I7SAW6	Vibrio_phage	29.6	5.1e-12
AVT98044.1|597692_598193_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98045.1|599085_600033_-	nucleoside-diphosphate sugar epimerase	NA	NA	NA	NA	NA
AVT98046.1|600167_600758_+	malonic semialdehyde reductase	NA	NA	NA	NA	NA
AVT98047.1|600968_601712_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AVT98048.1|604035_606723_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AVT98049.1|606809_607547_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98050.1|607557_608934_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	7.1e-63
AVT98051.1|610483_611586_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	5.0e-43
>prophage 3
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	652756	734427	4735208	transposase,tail,protease	Leptospira_phage(13.33%)	56	NA	NA
AVT98069.1|652756_653858_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	5.0e-43
AVT98070.1|654567_655944_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.1	7.8e-78
AVT98071.1|657116_658808_-	alpha,alpha-trehalase TreA	NA	NA	NA	NA	NA
AVT98072.1|659060_659846_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
AVT98073.1|661089_662094_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98074.1|662132_663062_-	GAF domain-containing protein	NA	NA	NA	NA	NA
AVT98075.1|663609_666498_-	insulinase family protein	NA	NA	NA	NA	NA
AVT98076.1|666750_669333_+	sensor domain-containing diguanylate cyclase	NA	G3MA91	Bacillus_virus	29.2	3.2e-08
AVT98077.1|669910_670709_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AVT98078.1|673312_674767_-	endoglucanase	NA	H2DE45	Erwinia_phage	32.6	5.2e-48
AVT98079.1|674974_676462_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	57.1	2.4e-125
AVU00949.1|676741_677695_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	38.0	1.7e-15
AVT98080.1|677863_679513_+	peptidase M20	NA	NA	NA	NA	NA
AVT98081.1|680504_682442_+	glucans biosynthesis glucosyltransferase MdoH	NA	NA	NA	NA	NA
AVT98082.1|682593_683262_+	carboxylesterase	NA	NA	NA	NA	NA
AVT98083.1|683266_684319_+	histidine kinase	NA	Q9EYF3	Enterobacteria_phage	33.6	1.4e-18
AVT98084.1|684349_685087_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AVT98085.1|685117_686032_+	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
AVT98086.1|686594_687395_-	DUF481 domain-containing protein	NA	NA	NA	NA	NA
AVT98087.1|687956_688922_+	YafY family transcriptional regulator	NA	NA	NA	NA	NA
AVT98088.1|689030_689600_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98089.1|689984_690296_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98090.1|690363_692457_+	S9 family peptidase	NA	NA	NA	NA	NA
AVT98091.1|693051_694236_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AVT98092.1|694345_696481_+	oligopeptidase B	NA	F2Y2Z7	Organic_Lake_phycodnavirus	26.1	1.8e-28
AVU00950.1|696824_697223_+	DUF454 domain-containing protein	NA	NA	NA	NA	NA
AVT98093.1|697280_697523_+	sugar transporter	NA	NA	NA	NA	NA
AVT98094.1|697512_698367_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
AVT98095.1|698354_699035_+	DUF484 domain-containing protein	NA	NA	NA	NA	NA
AVU00951.1|699228_700146_+	tyrosine recombinase XerC	NA	A0A142F2H8	Mycobacterium_phage	28.1	1.7e-12
AVT98096.1|700661_701213_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
AVT98097.1|701317_702685_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A2H5BJT2	Erwinia_phage	29.5	4.7e-43
AVT98098.1|702887_703343_-	nucleoside deaminase	NA	NA	NA	NA	NA
AVT98099.1|703339_703840_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AVU00952.1|705000_706650_-	MFS transporter	NA	NA	NA	NA	NA
AVT98100.1|706736_707498_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
AVT98101.1|707670_708561_+	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA	NA
AVT98102.1|708682_710695_+	M1 family peptidase	NA	NA	NA	NA	NA
AVT98103.1|710867_711587_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98104.1|711886_712510_+	HAD family hydrolase	NA	NA	NA	NA	NA
AVT98105.1|712621_713554_-	carbohydrate kinase family protein	NA	NA	NA	NA	NA
AVT98106.1|713829_714876_+	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	21.2	2.7e-06
AVT98107.1|715048_716383_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
AVT98108.1|716379_716865_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
AVT98109.1|716868_718929_+	penicillin-binding protein 2	NA	NA	NA	NA	NA
AVT98110.1|718925_720044_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
AVT98111.1|719956_720163_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98112.1|720521_721553_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	7.9e-75
AVT98113.1|722854_724246_+	endopolygalacturonase	NA	NA	NA	NA	NA
AVT98114.1|724514_725654_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
AVT98115.1|725650_727066_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	50.6	4.3e-15
AVT98116.1|727567_728773_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.9	1.6e-66
AVT98117.1|729852_730131_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98118.1|730118_730817_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
AVT98119.1|730831_731845_+	lipoyl synthase	NA	NA	NA	NA	NA
AVT98120.1|732243_734427_+|tail,protease	tail-specific protease	tail,protease	A0A0R6PIZ1	Moraxella_phage	31.4	3.7e-82
>prophage 4
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	1065195	1126202	4735208	transposase,protease	Leptospira_phage(18.18%)	44	NA	NA
AVT98378.1|1065195_1066254_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	1.8e-74
AVT98379.1|1067287_1068256_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	2.8e-98
AVT98380.1|1070158_1071532_-	MFS transporter	NA	NA	NA	NA	NA
AVT98381.1|1071630_1073670_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA	NA
AVT98382.1|1073877_1074900_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
AVU00977.1|1074873_1075068_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98383.1|1075315_1076413_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98384.1|1076605_1077115_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98385.1|1077134_1077995_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AVT98386.1|1077945_1078338_-	HNH endonuclease	NA	NA	NA	NA	NA
AVT98387.1|1078340_1079549_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	26.5	2.9e-20
AVT98388.1|1079639_1080737_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVT98389.1|1080740_1081601_+	sulfate ABC transporter permease subunit CysT	NA	NA	NA	NA	NA
AVT98390.1|1081597_1082551_+	sulfate ABC transporter permease subunit CysW	NA	NA	NA	NA	NA
AVU00978.1|1082558_1083593_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	2.0e-25
AVT98391.1|1083952_1084666_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00979.1|1084735_1085758_-	L-threonine 3-dehydrogenase	NA	NA	NA	NA	NA
AVT98392.1|1086273_1088607_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AVU00980.1|1091021_1093172_+	S46 family peptidase	NA	NA	NA	NA	NA
AVT98393.1|1093264_1093909_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
AVT98394.1|1094879_1096178_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
AVT98395.1|1096245_1097328_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
AVT98396.1|1097542_1098283_+	colicin V synthesis protein	NA	NA	NA	NA	NA
AVT98397.1|1098319_1099786_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	40.1	8.3e-86
AVT98398.1|1099924_1100749_+	DUF455 domain-containing protein	NA	NA	NA	NA	NA
AVT98399.1|1101468_1102267_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AVT98400.1|1102729_1103149_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98401.1|1103328_1104072_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
AVT98402.1|1104699_1105242_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AVT98403.1|1105222_1106359_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AVT98404.1|1106563_1108090_-	exopolyphosphatase	NA	NA	NA	NA	NA
AVT98405.1|1108261_1110364_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
AVT98406.1|1110467_1111811_-	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	33.8	5.0e-29
AVT98407.1|1111868_1112558_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	35.7	5.9e-34
AVU00981.1|1112732_1114379_-	peptidase	NA	NA	NA	NA	NA
AVT98408.1|1114528_1114837_+	glutaredoxin 3	NA	A0A2L0UZG6	Agrobacterium_phage	43.2	4.7e-07
AVT98409.1|1114833_1115229_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
AVT98410.1|1115443_1116451_+	isocitrate dehydrogenase	NA	NA	NA	NA	NA
AVT98411.1|1116591_1117353_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98412.1|1118559_1119618_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	42.9	2.6e-73
AVT98413.1|1119774_1119957_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98414.1|1120934_1121903_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	9.6e-99
AVT98415.1|1124190_1125483_+	trigger factor	NA	NA	NA	NA	NA
AVT98416.1|1125575_1126202_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.4	1.0e-56
>prophage 5
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	1149681	1212091	4735208	transposase,protease	Leptospira_phage(18.18%)	51	NA	NA
AVU00984.1|1149681_1150793_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	56.9	2.6e-84
AVU00983.1|1150731_1151823_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.0	9.3e-42
AVT98438.1|1151820_1152312_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98439.1|1152682_1154779_+	DNA polymerase III subunit gamma/tau	NA	E7DN81	Pneumococcus_phage	40.7	3.1e-46
AVT98440.1|1154785_1155106_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
AVT98441.1|1155203_1155797_+	recombination protein RecR	NA	NA	NA	NA	NA
AVT98442.1|1155898_1156249_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
AVT98443.1|1156368_1156902_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98444.1|1156901_1158851_-	DUF3488 domain-containing protein	NA	NA	NA	NA	NA
AVT98445.1|1158843_1159800_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AVT98446.1|1159805_1160759_-	MoxR family ATPase	NA	NA	NA	NA	NA
AVT98447.1|1160796_1162665_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00985.1|1162815_1164609_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98448.1|1164713_1165289_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AVT98449.1|1165401_1165911_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98450.1|1166008_1166203_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
AVT98451.1|1166292_1167270_+	3-oxoacyl-ACP synthase III	NA	NA	NA	NA	NA
AVT98452.1|1167501_1167942_+	MEKHLA domain-containing protein	NA	NA	NA	NA	NA
AVT98453.1|1168219_1169164_+	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA	NA
AVT98454.1|1169225_1169969_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.5	5.2e-12
AVT98455.1|1170173_1170413_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	44.6	5.9e-10
AVT98456.1|1170554_1171790_+	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA	NA
AVT98457.1|1171960_1173316_+	aminodeoxychorismate synthase, component I	NA	NA	NA	NA	NA
AVT98458.1|1173376_1174450_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
AVT98459.1|1174446_1175406_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AVT98460.1|1175402_1175756_+	pilus assembly protein PilZ	NA	NA	NA	NA	NA
AVT98461.1|1176255_1176753_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98462.1|1176956_1177283_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98463.1|1177519_1179295_-	propionate catabolism operon regulatory protein PrpR	NA	NA	NA	NA	NA
AVT98464.1|1179263_1180160_+	methylisocitrate lyase	NA	NA	NA	NA	NA
AVT98465.1|1180235_1181390_+	2-methylcitrate synthase	NA	NA	NA	NA	NA
AVT98466.1|1181578_1184170_+	Fe/S-dependent 2-methylisocitrate dehydratase AcnD	NA	NA	NA	NA	NA
AVU00986.1|1184714_1184918_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98467.1|1186063_1187287_+	2-methylaconitate cis-trans isomerase PrpF	NA	NA	NA	NA	NA
AVT98468.1|1187791_1190008_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AVT98469.1|1190085_1191096_+	nucleoside hydrolase	NA	NA	NA	NA	NA
AVT98470.1|1192000_1194988_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AVT98471.1|1195162_1196110_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	36.0	6.5e-07
AVT98472.1|1197100_1197661_-	bacterioferritin	NA	NA	NA	NA	NA
AVT98473.1|1198349_1198826_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
AVT98474.1|1199236_1200136_+	cytochrome C biogenesis protein	NA	A0A2L0UZR4	Agrobacterium_phage	27.7	4.5e-18
AVT98475.1|1200697_1201084_+	response regulator	NA	W8CYM9	Bacillus_phage	31.8	9.6e-10
AVT98476.1|1201052_1201349_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98477.1|1201709_1202837_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AVT98478.1|1202836_1203700_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
AVT98479.1|1203994_1204180_+	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
AVT98480.1|1204518_1205811_+	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	37.5	6.4e-74
AVT98481.1|1206136_1208809_+	aminopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	28.2	4.7e-79
AVT98482.1|1209294_1210326_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AVU00987.1|1210416_1210764_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
AVT98483.1|1210971_1212091_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	3.0e-43
>prophage 6
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	1236307	1312121	4735208	transposase,protease	Bacillus_phage(15.38%)	56	NA	NA
AVT98498.1|1236307_1237705_-|protease	serine protease	protease	NA	NA	NA	NA
AVT98499.1|1238132_1240103_+	oligopeptide transporter, OPT family	NA	NA	NA	NA	NA
AVT98500.1|1240947_1241793_+	transporter	NA	NA	NA	NA	NA
AVU00993.1|1242081_1244202_+	S9 family peptidase	NA	NA	NA	NA	NA
AVT98501.1|1244478_1244940_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98502.1|1245071_1245797_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AVT98503.1|1246614_1248756_+	outer protein P	NA	NA	NA	NA	NA
AVT98504.1|1248872_1251008_+	outer protein P	NA	NA	NA	NA	NA
AVT98505.1|1251170_1251976_-|transposase	IS5/IS1182 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	37.1	5.3e-10
AVT98506.1|1251972_1252167_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00994.1|1253078_1254317_-	type III secretion system effector protein	NA	NA	NA	NA	NA
AVT98507.1|1255142_1257248_-	catalase HPII	NA	A0A2K9L0T1	Tupanvirus	47.7	1.9e-136
AVT98508.1|1258897_1259545_-	VRR-NUC domain-containing protein	NA	Q8W6S1	Burkholderia_virus	45.5	6.5e-35
AVT98509.1|1259541_1260093_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
AVT98510.1|1260216_1260399_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00995.1|1260458_1263392_-	glycine dehydrogenase (aminomethyl-transferring)	NA	M4QFZ1	Prochlorococcus_phage	50.0	6.2e-258
AVT98511.1|1263859_1264051_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00996.1|1264481_1265285_+	sulfotransferase	NA	M4QPS9	Synechococcus_phage	27.7	9.0e-26
AVU00997.1|1265373_1266585_+	hemolysin D	NA	NA	NA	NA	NA
AVT98512.1|1266581_1268741_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	28.0	2.2e-34
AVT98513.1|1269549_1269954_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98514.1|1270035_1272054_-	peptidase M2 family protein	NA	NA	NA	NA	NA
AVT98515.1|1272165_1273836_-	phosphoethanolamine transferase	NA	NA	NA	NA	NA
AVU00998.1|1273832_1274597_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AVU00999.1|1274696_1276430_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
AVT98516.1|1276649_1277366_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	34.4	2.8e-23
AVT98517.1|1277358_1278651_+	sensor histidine kinase	NA	NA	NA	NA	NA
AVT98518.1|1278802_1279294_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98519.1|1279362_1279620_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
AVT98520.1|1279622_1280432_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
AVT98521.1|1280467_1281208_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
AVT98522.1|1281212_1281812_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AVT98523.1|1282056_1283253_+	sensor histidine kinase	NA	NA	NA	NA	NA
AVT98524.1|1283252_1283894_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AVT98525.1|1284244_1285441_+	polyketide cyclase	NA	NA	NA	NA	NA
AVT98526.1|1285522_1285909_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AVT98527.1|1285911_1286586_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
AVT98528.1|1286649_1287447_-	peptidase	NA	NA	NA	NA	NA
AVT98529.1|1287577_1287757_-	Arc family DNA binding domain-containing protein	NA	NA	NA	NA	NA
AVT98530.1|1287753_1288038_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98531.1|1288653_1289856_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
AVT98532.1|1290054_1290264_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98533.1|1290260_1290677_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98534.1|1290832_1291564_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98535.1|1291763_1292642_+	hypothetical protein	NA	A8ATW4	Listeria_phage	34.5	3.9e-06
AVT98536.1|1292749_1293010_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
AVT98537.1|1293069_1294551_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98538.1|1294566_1298304_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AVT98539.1|1298300_1299284_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
AVT98540.1|1299280_1300075_+	OmpA family protein	NA	NA	NA	NA	NA
AVT98541.1|1300127_1301198_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AVT98542.1|1302142_1304962_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.4	4.7e-53
AVU01000.1|1305467_1306484_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.3	7.3e-49
AVT98543.1|1307591_1308968_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	54.8	3.0e-77
AVT98544.1|1309111_1310488_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.6	5.1e-61
AVT98545.1|1311152_1312121_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
>prophage 7
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	1316384	1385747	4735208	transposase,protease,plate	Ralstonia_phage(27.27%)	57	NA	NA
AVT98548.1|1316384_1317719_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AVT98549.1|1317870_1318479_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AVU01001.1|1318864_1319353_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98550.1|1319399_1319900_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AVT98551.1|1319903_1321400_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AVT98552.1|1321541_1322039_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AVT98553.1|1322186_1322675_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AVT98554.1|1322677_1324513_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AVT98555.1|1324476_1325568_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AVT98556.1|1325653_1328386_+	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	29.6	7.1e-91
AVT98557.1|1328416_1328770_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98558.1|1328862_1331637_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.4	4.0e-41
AVT98559.1|1331611_1332484_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98560.1|1332503_1335371_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98561.1|1335382_1336408_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98562.1|1336720_1337785_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AVT98563.1|1337799_1338051_-	hypothetical protein	NA	NA	NA	NA	NA
AVU01002.1|1338350_1339463_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
AVT98564.1|1339459_1340002_-	shikimate kinase	NA	NA	NA	NA	NA
AVT98565.1|1340168_1340768_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AVT98566.1|1340948_1341365_+	DUF2170 domain-containing protein	NA	NA	NA	NA	NA
AVT98567.1|1341377_1342151_+	PspA/IM30 family protein	NA	NA	NA	NA	NA
AVT98568.1|1342176_1343259_+	potassium channel protein	NA	NA	NA	NA	NA
AVT98569.1|1343261_1343933_+	DUF2491 domain-containing protein	NA	NA	NA	NA	NA
AVT98570.1|1343970_1344375_+	DUF350 domain-containing protein	NA	NA	NA	NA	NA
AVT98571.1|1344387_1344960_+	DUF1190 domain-containing protein	NA	A0A191ZBZ0	Erwinia_phage	28.1	6.4e-10
AVT98572.1|1344961_1346128_+	glutathionylspermidine synthase family protein	NA	B2ZXR7	Ralstonia_phage	41.6	6.4e-73
AVU01003.1|1346490_1346952_-	MFS transporter	NA	NA	NA	NA	NA
AVT98573.1|1348749_1350756_+	peptidase M1	NA	NA	NA	NA	NA
AVT98574.1|1351805_1354952_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AVT98575.1|1354971_1355208_-	transcriptional regulator	NA	NA	NA	NA	NA
AVT98576.1|1355283_1356036_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
AVT98577.1|1356046_1357093_+	cupin-like domain-containing protein	NA	NA	NA	NA	NA
AVT98578.1|1357133_1358651_+	tryptophan 7-halogenase	NA	A0A1D7SF58	Cyanophage	31.8	5.8e-50
AVT98579.1|1358688_1359693_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AVU01004.1|1359837_1360236_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98580.1|1360367_1361744_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.3	1.1e-60
AVT98581.1|1361886_1362072_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98582.1|1362331_1363729_-|protease	serine protease	protease	NA	NA	NA	NA
AVT98583.1|1364170_1365553_-	amino acid permease	NA	NA	NA	NA	NA
AVT98584.1|1365745_1366510_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AVT98585.1|1366823_1367765_+	amino acid amidase	NA	NA	NA	NA	NA
AVT98586.1|1368520_1369909_+	amino acid permease	NA	NA	NA	NA	NA
AVT98587.1|1371858_1373313_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	41.0	9.0e-93
AVT98588.1|1373269_1374172_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98589.1|1374171_1375413_-	DNA (cytosine-5-)-methyltransferase	NA	M1PSQ0	Streptococcus_phage	34.7	3.2e-54
AVT98590.1|1375645_1376614_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	1.6e-98
AVT98591.1|1377734_1378751_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AVU01005.1|1378811_1379606_-	phospholipase	NA	NA	NA	NA	NA
AVT98592.1|1379765_1381127_-	magnesium transporter	NA	NA	NA	NA	NA
AVT98593.1|1381189_1381414_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98594.1|1381414_1383145_-	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	24.1	1.0e-10
AVT98595.1|1383203_1383473_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
AVT98596.1|1383465_1383858_-	PTS fructose IIA subunit family protein	NA	NA	NA	NA	NA
AVT98597.1|1383934_1384249_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98598.1|1384251_1385220_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	3.3e-99
AVT98599.1|1385345_1385747_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	1410628	1471583	4735208	transposase	Ralstonia_phage(20.0%)	57	NA	NA
AVT98627.1|1410628_1411687_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	6.2e-75
AVT98628.1|1411753_1412722_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
AVT98629.1|1413025_1413355_-	non-heme iron oxygenase ferredoxin subunit	NA	NA	NA	NA	NA
AVT98630.1|1413351_1413891_-	N-acetyltransferase	NA	NA	NA	NA	NA
AVT98631.1|1414435_1415452_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	2.5e-49
AVT98632.1|1416260_1417505_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	41.7	5.0e-92
AVT98633.1|1417501_1418764_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
AVT98634.1|1418763_1419528_-	Fe-S cluster assembly ATPase SufC	NA	W5SAS9	Pithovirus	28.5	2.0e-11
AVT98635.1|1419785_1421243_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
AVT98636.1|1421258_1421717_-	SUF system Fe-S cluster assembly regulator	NA	NA	NA	NA	NA
AVT98637.1|1421888_1422356_+	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA	NA
AVT98638.1|1422460_1422679_+	peptidase	NA	NA	NA	NA	NA
AVT98639.1|1423285_1423882_-	DUF1439 domain-containing protein	NA	NA	NA	NA	NA
AVT98640.1|1423937_1424480_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98641.1|1424537_1424879_-	DUF3861 domain-containing protein	NA	NA	NA	NA	NA
AVT98642.1|1424936_1425578_-	M23 family peptidase	NA	NA	NA	NA	NA
AVT98643.1|1425682_1426108_-	DNA-binding protein	NA	NA	NA	NA	NA
AVT98644.1|1426663_1427524_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AVT98645.1|1427567_1428260_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AVT98646.1|1428325_1429091_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AVT98647.1|1429441_1430479_+	type IV pili twitching motility protein PilT	NA	NA	NA	NA	NA
AVT98648.1|1430592_1431723_+	type IV pili twitching motility protein PilT	NA	NA	NA	NA	NA
AVU01008.1|1432012_1432669_+	YitT family protein	NA	NA	NA	NA	NA
AVT98649.1|1433771_1434344_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AVT98650.1|1434340_1434775_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98651.1|1434771_1435653_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98652.1|1435620_1436187_+	YqgE/AlgH family protein	NA	NA	NA	NA	NA
AVT98653.1|1436179_1436647_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
AVT98654.1|1436660_1437608_+	aspartate carbamoyltransferase catalytic subunit	NA	NA	NA	NA	NA
AVT98655.1|1438044_1438479_+	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AVT98656.1|1438631_1439231_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AVT98657.1|1439528_1440410_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AVT98658.1|1441502_1444112_+	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
AVT98659.1|1444095_1444554_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98660.1|1444550_1445906_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98661.1|1445886_1447293_+	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
AVT98662.1|1447339_1447513_+	AsmA family protein	NA	NA	NA	NA	NA
AVT98663.1|1447609_1448431_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AVT98664.1|1448525_1449494_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.5e-99
AVT98665.1|1449496_1449790_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98666.1|1449748_1450747_-	octaprenyl-diphosphate synthase	NA	NA	NA	NA	NA
AVT98667.1|1451022_1451556_+	single-stranded DNA-binding protein	NA	L7TJL2	Pseudomonas_virus	60.9	1.9e-32
AVT98668.1|1451838_1453323_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.5	5.0e-14
AVT98669.1|1453616_1454324_+	NAD(P)-dependent alcohol dehydrogenase	NA	NA	NA	NA	NA
AVT98670.1|1456835_1457513_+	HAD family hydrolase	NA	NA	NA	NA	NA
AVT98671.1|1457748_1457955_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98672.1|1458049_1458274_-	putative selenoprotein	NA	NA	NA	NA	NA
AVT98673.1|1458273_1460346_-	carbon starvation protein A	NA	NA	NA	NA	NA
AVU01009.1|1460629_1461436_+	pirin family protein	NA	NA	NA	NA	NA
AVT98674.1|1461522_1461894_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98675.1|1462297_1465114_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.6	4.7e-53
AVT98676.1|1465113_1466010_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AVT98677.1|1466006_1466471_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AVU01010.1|1466494_1466974_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AVU01011.1|1467123_1467603_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AVT98678.1|1467689_1469426_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
AVT98679.1|1470206_1471583_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	48.1	9.9e-65
>prophage 9
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	1568760	1667553	4735208	transposase,tRNA,protease	Ralstonia_phage(20.0%)	82	NA	NA
AVT98741.1|1568760_1571403_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	40.0	4.7e-172
AVT98742.1|1571916_1572552_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98743.1|1572574_1573603_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
AVT98744.1|1573599_1574499_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA	NA
AVT98745.1|1574555_1574972_+	ribosome silencing factor	NA	NA	NA	NA	NA
AVT98746.1|1574983_1576099_+	J domain-containing protein	NA	NA	NA	NA	NA
AVT98747.1|1577188_1577659_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
AVT98748.1|1578096_1578771_-	energy transducer TonB	NA	NA	NA	NA	NA
AVT98749.1|1579081_1582192_-	Oar protein	NA	NA	NA	NA	NA
AVT98750.1|1582658_1583393_-	SIMPL domain-containing protein	NA	NA	NA	NA	NA
AVT98751.1|1583531_1584104_+	Maf-like protein	NA	NA	NA	NA	NA
AVT98752.1|1584103_1585603_+	ribonuclease G	NA	NA	NA	NA	NA
AVT98753.1|1585743_1589664_+	TIGR02099 family protein	NA	NA	NA	NA	NA
AVU01021.1|1589669_1590422_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98754.1|1590520_1591966_+|protease	metalloprotease TldD	protease	NA	NA	NA	NA
AVT98755.1|1592222_1592804_-	DUF615 domain-containing protein	NA	NA	NA	NA	NA
AVU01022.1|1592949_1594317_+|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
AVU01023.1|1594391_1594796_+	DUF4870 domain-containing protein	NA	NA	NA	NA	NA
AVT98756.1|1594847_1595309_+	DUF4870 domain-containing protein	NA	NA	NA	NA	NA
AVT98757.1|1595378_1596476_-|protease	protease	protease	NA	NA	NA	NA
AVT98758.1|1596882_1597680_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AVT98759.1|1597792_1598668_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
AVT98760.1|1598669_1598930_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
AVT98761.1|1598961_1600266_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
AVT98762.1|1600299_1602006_-	alkaline phosphatase	NA	NA	NA	NA	NA
AVT98763.1|1602148_1603489_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
AVT98764.1|1603498_1604335_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AVT98765.1|1604581_1605073_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AVT98766.1|1605280_1606030_-	NlpC/P60 family protein	NA	A0A0K2SUC1	Clostridium_phage	38.5	1.2e-19
AVT98767.1|1606139_1606676_-	NlpC/P60 family protein	NA	A0A1V0DZX6	Clostridioides_phage	40.5	3.2e-19
AVT98768.1|1606786_1607266_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AVT98769.1|1607494_1608739_+	DUF418 domain-containing protein	NA	NA	NA	NA	NA
AVT98770.1|1608746_1609997_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AVT98771.1|1609993_1611364_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.8	2.4e-34
AVU01024.1|1612921_1613218_+	cysteine methyltransferase	NA	NA	NA	NA	NA
AVT98772.1|1613258_1613957_+	DUF1751 domain-containing protein	NA	NA	NA	NA	NA
AVT98773.1|1614207_1615176_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	9.6e-99
AVT98774.1|1615759_1616785_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	1.9e-49
AVT98775.1|1616819_1617940_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	3.0e-43
AVT98776.1|1618767_1620144_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	48.1	9.9e-65
AVT98777.1|1621149_1623165_-	M13 family peptidase	NA	NA	NA	NA	NA
AVU01025.1|1623834_1624851_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	3.3e-49
AVT98778.1|1625247_1626216_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
AVT98779.1|1626443_1626869_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98780.1|1627234_1628086_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AVT98781.1|1628181_1628751_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	74.9	4.5e-72
AVU01026.1|1628785_1628971_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98782.1|1629116_1629545_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98783.1|1629547_1630516_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
AVT98784.1|1630675_1630843_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98785.1|1630870_1631305_-	HIT family protein	NA	NA	NA	NA	NA
AVT98786.1|1631301_1631964_-	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AVT98787.1|1632144_1633509_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
AVT98788.1|1633571_1634540_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	3.3e-99
AVT98789.1|1634665_1635190_-	hypothetical protein	NA	NA	NA	NA	NA
AVU01027.1|1635186_1635699_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
AVT98790.1|1635857_1636977_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.2	2.4e-40
AVU01028.1|1637195_1637774_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98791.1|1637793_1639299_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	45.4	5.5e-85
AVU01029.1|1639488_1639674_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98792.1|1639593_1641177_+	lytic transglycosylase	NA	I1VXB7	Halocynthia_phage	30.6	4.7e-10
AVT98793.1|1641726_1642575_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
AVT98794.1|1642571_1643222_-	SCO family protein	NA	NA	NA	NA	NA
AVT98795.1|1643302_1644229_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AVT98796.1|1644239_1645343_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	40.7	1.4e-74
AVT98797.1|1645335_1646409_+	D-glycerate dehydrogenase	NA	M1HTA3	Paramecium_bursaria_Chlorella_virus	24.1	1.2e-14
AVT98798.1|1646492_1647518_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AVU01030.1|1647978_1650045_+	ferrous iron transporter B	NA	NA	NA	NA	NA
AVT98799.1|1650041_1650449_+	VOC family protein	NA	NA	NA	NA	NA
AVT98800.1|1650621_1651395_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AVT98801.1|1651391_1652060_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
AVT98802.1|1652442_1653369_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	23.7	5.2e-09
AVT98803.1|1653474_1654692_+	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
AVT98804.1|1655138_1655945_+	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
AVT98805.1|1656271_1657159_+	acetyl-CoA carboxylase carboxyl transferase subunit beta	NA	NA	NA	NA	NA
AVT98806.1|1657155_1658505_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AVT98807.1|1658627_1659566_+	isopenicillin N synthase family oxygenase	NA	NA	NA	NA	NA
AVU01031.1|1659775_1660459_+	methylamine utilization protein	NA	NA	NA	NA	NA
AVT98808.1|1660455_1662822_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AVT98809.1|1662818_1663691_+	DUF3034 domain-containing protein	NA	NA	NA	NA	NA
AVT98810.1|1663690_1664119_+	group 1 truncated hemoglobin	NA	NA	NA	NA	NA
AVT98811.1|1666176_1667553_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	1.4e-63
>prophage 10
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	1739013	1772822	4735208	transposase,integrase,tRNA,protease	Leptospira_phage(20.0%)	26	1730061:1730076	1773162:1773177
1730061:1730076	attL	GCGCGCACCGTCCAGC	NA	NA	NA	NA
AVT98870.1|1739013_1739811_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AVT98871.1|1739988_1741108_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	3.0e-43
AVU01035.1|1741528_1741996_-	energy transducer TonB	NA	NA	NA	NA	NA
AVT98872.1|1742426_1743395_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	3.0e-100
AVT98873.1|1743516_1744284_-	energy transducer TonB	NA	NA	NA	NA	NA
AVT98874.1|1744290_1745682_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	49.6	1.0e-93
AVT98875.1|1746142_1746727_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
AVT98876.1|1746826_1747843_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AVU01036.1|1748466_1749885_+|integrase	integrase	integrase	NA	NA	NA	NA
AVT98877.1|1749980_1750223_+	PbsX family transcriptional regulator	NA	NA	NA	NA	NA
AVT98878.1|1750216_1750558_+	toxin MazF	NA	NA	NA	NA	NA
AVT98879.1|1752428_1756022_-	avirulence protein	NA	NA	NA	NA	NA
AVT98880.1|1757396_1759508_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	32.2	1.3e-15
AVT98881.1|1760003_1761002_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AVT98882.1|1761077_1761245_-	transcriptional regulator	NA	NA	NA	NA	NA
AVU01037.1|1761900_1762245_-	response regulator	NA	NA	NA	NA	NA
AVT98883.1|1762547_1764065_+	circadian clock protein KaiC	NA	NA	NA	NA	NA
AVT98884.1|1764051_1766124_+	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA	NA
AVU01038.1|1766268_1766970_-	C-type cytochrome biogenesis protein	NA	NA	NA	NA	NA
AVT98885.1|1766969_1767467_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
AVT98886.1|1767466_1768009_-	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA	NA
AVT98887.1|1768005_1769994_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA	NA
AVT98888.1|1770057_1770528_-	cytochrome c biogenesis protein CcmE	NA	NA	NA	NA	NA
AVT98889.1|1770524_1770731_-	heme exporter protein CcmD	NA	NA	NA	NA	NA
AVT98890.1|1770727_1771486_-	heme ABC transporter permease	NA	NA	NA	NA	NA
AVT98891.1|1771496_1772822_-|protease	serine protease	protease	A0A217EQY2	Bacillus_phage	36.7	4.0e-23
1773162:1773177	attR	GCGCGCACCGTCCAGC	NA	NA	NA	NA
>prophage 11
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	1831919	1841807	4735208	tRNA	Micromonas_sp._RCC1109_virus(16.67%)	9	NA	NA
AVU01050.1|1831919_1833596_+	2-polyprenylphenol 6-hydroxylase	NA	E5EQ95	Micromonas_sp._RCC1109_virus	27.3	2.8e-37
AVT98940.1|1833684_1834326_+	LexA repressor 2	NA	A0A1W6JNS2	Morganella_phage	40.2	2.4e-13
AVT98941.1|1834498_1835533_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.0	1.6e-112
AVT98942.1|1835601_1835823_-	hypothetical protein	NA	NA	NA	NA	NA
AVT98943.1|1835834_1836323_+	recombination regulator RecX	NA	NA	NA	NA	NA
AVT98944.1|1836424_1839073_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.8	2.4e-83
AVT98945.1|1839212_1839425_+	carbon storage regulator	NA	J7I430	Pseudomonas_phage	76.5	1.3e-13
AVT98946.1|1839952_1840135_+	hypothetical protein	NA	NA	NA	NA	NA
AVT98947.1|1841315_1841807_+	lysozyme	NA	D5LH07	Escherichia_phage	67.7	4.6e-57
>prophage 12
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	1968026	2049117	4735208	transposase,tRNA	uncultured_Caudovirales_phage(38.1%)	47	NA	NA
AVT99051.1|1968026_1969544_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	38.5	8.6e-86
AVT99052.1|1969685_1970822_+	two-component system response regulator	NA	NA	NA	NA	NA
AVT99053.1|1970823_1971162_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99054.1|1971186_1973364_+	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	33.1	1.3e-47
AVT99055.1|1973375_1974245_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AVT99056.1|1974421_1976104_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	26.2	2.1e-32
AVT99057.1|1976753_1979522_-	aconitate hydratase AcnA	NA	NA	NA	NA	NA
AVT99058.1|1979669_1979918_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
AVT99059.1|1979914_1980325_+	PIN domain-containing protein	NA	NA	NA	NA	NA
AVT99060.1|1980390_1982982_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
AVT99061.1|1983335_1984151_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
AVT99062.1|1984806_1987050_-	bifunctional diguanylate cyclase/phosphodiesterase	NA	NA	NA	NA	NA
AVT99063.1|1987158_1988235_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AVT99064.1|1988231_1988828_-	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
AVT99065.1|1988824_1989691_-	chemotaxis protein CheR	NA	NA	NA	NA	NA
AVT99066.1|1989936_1992327_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	58.3	3.9e-08
AVU01061.1|1992405_1992750_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99067.1|1993104_1993587_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
AVT99068.1|1993722_1994520_-	flagellar brake protein	NA	NA	NA	NA	NA
AVT99069.1|1995561_1997823_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	54.5	1.3e-10
AVT99070.1|1998234_2000496_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	2.5e-12
AVT99071.1|2001087_2003562_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	47.4	1.9e-10
AVT99072.1|2003607_2004666_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	1.8e-74
AVT99073.1|2007666_2009910_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.8	3.4e-14
AVT99074.1|2010419_2011796_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
AVT99075.1|2012077_2014291_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	63.2	1.9e-09
AVT99076.1|2014488_2016858_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	61.7	2.7e-09
AVT99077.1|2016871_2017633_-	transporter	NA	NA	NA	NA	NA
AVT99078.1|2023140_2025402_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	61.4	2.8e-08
AVU01062.1|2025520_2026537_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	2.5e-49
AVT99079.1|2026513_2027300_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AVT99080.1|2027957_2029016_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	8.9e-74
AVT99081.1|2029319_2031329_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
AVT99082.1|2031362_2031728_-	response regulator	NA	W8CYM9	Bacillus_phage	39.3	2.7e-14
AVT99083.1|2031724_2032033_-	STAS domain-containing protein	NA	NA	NA	NA	NA
AVT99084.1|2032133_2033156_-	chemotaxis protein	NA	NA	NA	NA	NA
AVT99085.1|2033152_2033935_-	ParA family protein	NA	Q8JL10	Natrialba_phage	35.7	1.7e-13
AVT99086.1|2033936_2034911_-	flagellar motor protein MotD	NA	NA	NA	NA	NA
AVT99087.1|2034917_2035658_-	flagellar motor protein	NA	NA	NA	NA	NA
AVT99088.1|2035746_2036100_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99089.1|2038386_2039094_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	51.2	1.4e-51
AVT99090.1|2039096_2040041_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99091.1|2040610_2042830_-	TonB-dependent siderophore receptor	NA	A0A0P0I887	Acinetobacter_phage	28.6	3.7e-05
AVT99092.1|2043084_2043537_-	hypothetical protein	NA	NA	NA	NA	NA
AVU01063.1|2044428_2047470_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AVT99093.1|2047714_2047993_-	hypothetical protein	NA	A0A0P0ZG22	Escherichia_phage	70.3	9.0e-34
AVT99094.1|2048148_2049117_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
>prophage 13
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	2136150	2217462	4735208	transposase,tRNA,protease	Ralstonia_phage(16.67%)	54	NA	NA
AVT99167.1|2136150_2137287_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
AVT99168.1|2137283_2137742_-	NUDIX hydrolase	NA	NA	NA	NA	NA
AVT99169.1|2137992_2138313_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	1.3e-12
AVT99170.1|2138455_2140738_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	44.6	5.1e-175
AVT99171.1|2140945_2141164_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
AVU01069.1|2141244_2141997_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
AVT99172.1|2142130_2142760_-	cinnamoyl-CoA reductase	NA	NA	NA	NA	NA
AVT99173.1|2143435_2144557_-	N-acetyltransferase	NA	NA	NA	NA	NA
AVT99174.1|2144614_2145583_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.5	1.2e-64
AVT99175.1|2145866_2148224_+	DNA translocase FtsK	NA	G1D482	Mycobacterium_virus	45.8	2.5e-84
AVT99176.1|2148386_2150315_+	DUF3857 domain-containing protein	NA	NA	NA	NA	NA
AVU01070.1|2150421_2151051_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
AVT99177.1|2151163_2155330_-	type III effector	NA	NA	NA	NA	NA
AVU01071.1|2155566_2156943_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.3	4.0e-74
AVT99178.1|2156974_2157301_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99179.1|2157297_2157705_-	fluoride efflux transporter CrcB	NA	A0A2H4J148	uncultured_Caudovirales_phage	49.1	7.5e-21
AVT99180.1|2157736_2158087_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99181.1|2158083_2159415_-	voltage-gated chloride channel protein	NA	A0A1X9I5Z9	Streptococcus_phage	35.2	4.3e-41
AVT99182.1|2159735_2160941_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AVT99183.1|2161105_2163478_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AVT99184.1|2163502_2164135_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AVT99185.1|2164353_2164779_+	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	41.7	1.1e-19
AVT99186.1|2164797_2166003_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
AVT99187.1|2166013_2166802_+	type IV pilus biogenesis/stability protein PilW	NA	NA	NA	NA	NA
AVT99188.1|2166798_2167659_+	DUF4115 domain-containing protein	NA	NA	NA	NA	NA
AVT99189.1|2167729_2168368_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99190.1|2168364_2169585_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
AVT99191.1|2169595_2170993_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AVT99192.1|2171307_2172528_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AVT99193.1|2173019_2174180_-	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
AVU01072.1|2175028_2176045_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.7	2.8e-48
AVT99194.1|2176382_2176982_-	DUF1264 domain-containing protein	NA	NA	NA	NA	NA
AVT99195.1|2177127_2178096_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	2.8e-98
AVT99196.1|2178244_2178634_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99197.1|2178572_2178950_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99198.1|2179155_2180409_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AVT99199.1|2180446_2181016_+	molybdenum cofactor guanylyltransferase	NA	NA	NA	NA	NA
AVT99200.1|2180999_2181362_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99201.1|2183736_2184714_-	siroheme synthase	NA	NA	NA	NA	NA
AVT99202.1|2186035_2186224_+	nitrate transport ATP-binding protein	NA	NA	NA	NA	NA
AVT99203.1|2186236_2186512_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99204.1|2187156_2187414_+	stress-induced protein	NA	NA	NA	NA	NA
AVT99205.1|2187639_2188608_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.1e-99
AVT99206.1|2189249_2189735_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
AVT99207.1|2189841_2190762_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
AVT99208.1|2191951_2193763_-	EAL domain-containing protein	NA	NA	NA	NA	NA
AVT99209.1|2194513_2203942_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99210.1|2204219_2204831_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AVT99211.1|2204827_2205850_-	sensor histidine kinase	NA	NA	NA	NA	NA
AVT99212.1|2205968_2207453_-	histidine kinase	NA	NA	NA	NA	NA
AVT99213.1|2207449_2210542_-	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA	NA
AVT99214.1|2210534_2211650_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AVT99215.1|2212139_2214875_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AVT99216.1|2216343_2217462_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.0	3.3e-42
>prophage 14
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	2312107	2373419	4735208	transposase,plate	Ralstonia_phage(57.14%)	35	NA	NA
AVT99236.1|2312107_2313076_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.1e-99
AVT99237.1|2314978_2318104_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AVT99238.1|2318155_2319268_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AVT99239.1|2319391_2319970_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AVT99240.1|2322518_2324606_+	type III effector	NA	NA	NA	NA	NA
AVU01076.1|2326547_2329637_+	histidine kinase	NA	NA	NA	NA	NA
AVU01077.1|2331921_2332629_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AVT99241.1|2332625_2333618_+	cytochrome-c peroxidase	NA	NA	NA	NA	NA
AVT99242.1|2333614_2336074_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AVT99243.1|2336187_2337168_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AVT99244.1|2337176_2338205_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AVT99245.1|2338377_2338704_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99246.1|2338700_2341604_-	serine/threonine protein kinase	NA	A0A2R8FF19	Brazilian_cedratvirus	25.0	5.6e-09
AVT99247.1|2341600_2342323_-	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
AVT99248.1|2342319_2342967_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
AVT99249.1|2342963_2346422_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AVT99250.1|2346425_2347742_-	type VI secretion system protein TssL	NA	NA	NA	NA	NA
AVT99251.1|2347743_2349081_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AVT99252.1|2349077_2350466_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
AVT99253.1|2350462_2351002_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99254.1|2351010_2352948_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	28.6	7.7e-39
AVT99255.1|2353211_2353673_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99256.1|2353775_2353979_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99257.1|2355023_2356400_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.1	4.6e-78
AVT99258.1|2356562_2357531_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
AVT99259.1|2357972_2360744_-	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	29.3	1.2e-77
AVT99260.1|2360776_2361787_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AVT99261.1|2361750_2363628_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AVT99262.1|2363631_2364135_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AVT99263.1|2364122_2364956_-	ImpE protein	NA	NA	NA	NA	NA
AVT99264.1|2364991_2365495_-	Hcp1 family type VI secretion system effector	NA	NA	NA	NA	NA
AVT99265.1|2365594_2367109_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AVU01078.1|2367101_2367608_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AVT99266.1|2367952_2368750_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AVT99267.1|2372450_2373419_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	2.1e-98
>prophage 15
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	2614269	2703340	4735208	transposase,tRNA,protease	Ralstonia_phage(14.29%)	54	NA	NA
AVT99457.1|2614269_2614710_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	46.0	7.1e-25
AVT99458.1|2614788_2615424_-	stringent starvation protein A	NA	NA	NA	NA	NA
AVU01094.1|2615820_2616564_-	cytochrome c1	NA	NA	NA	NA	NA
AVT99459.1|2616571_2617831_-	cytochrome b	NA	NA	NA	NA	NA
AVT99460.1|2617830_2618475_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AVT99461.1|2619002_2619989_-	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	56.0	1.3e-29
AVT99462.1|2621341_2621635_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
AVU01095.1|2621930_2623385_+|tRNA	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase	tRNA	NA	NA	NA	NA
AVT99463.1|2623808_2624795_+	PhoH family protein	NA	A0A1B2ICF6	Erwinia_phage	47.7	4.8e-45
AVT99464.1|2625225_2625870_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99465.1|2625924_2626410_+	endoribonuclease YbeY	NA	NA	NA	NA	NA
AVT99466.1|2626409_2626928_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99467.1|2627022_2627901_+	CBS domain-containing protein	NA	NA	NA	NA	NA
AVT99468.1|2627897_2629178_+	DUF4105 domain-containing protein	NA	NA	NA	NA	NA
AVT99469.1|2629193_2630195_+	magnesium and cobalt transport protein CorA	NA	NA	NA	NA	NA
AVU01096.1|2630346_2631711_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AVT99470.1|2632185_2633034_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
AVT99471.1|2633030_2633942_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA	NA
AVT99472.1|2634070_2635204_-	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.3	7.4e-26
AVT99473.1|2635349_2636861_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99474.1|2636847_2638434_-	MFS transporter	NA	NA	NA	NA	NA
AVT99475.1|2638430_2639633_-	HlyD family secretion protein	NA	NA	NA	NA	NA
AVT99476.1|2640481_2641450_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	3.6e-98
AVT99477.1|2644069_2645455_-	glutamine synthetase	NA	NA	NA	NA	NA
AVU01097.1|2646101_2647481_+	glutamine synthetase	NA	NA	NA	NA	NA
AVT99478.1|2647480_2648797_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AVT99479.1|2648933_2650178_+	diguanylate cyclase response regulator	NA	A0A127AWB9	Bacillus_phage	36.4	1.9e-19
AVT99480.1|2650483_2651764_-	MFS transporter	NA	NA	NA	NA	NA
AVT99481.1|2652065_2652374_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99482.1|2652333_2654682_-	CbbBc protein	NA	NA	NA	NA	NA
AVT99483.1|2654678_2655524_-	sulfurtransferase FdhD	NA	NA	NA	NA	NA
AVT99484.1|2655530_2657210_-	MFS transporter	NA	NA	NA	NA	NA
AVT99485.1|2657738_2659091_+	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
AVT99486.1|2659151_2662283_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99487.1|2662447_2663302_+	plasmid replication/partition related protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	38.7	3.2e-13
AVT99488.1|2663472_2664777_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
AVT99489.1|2664918_2669013_+	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	28.4	5.0e-56
AVT99490.1|2670105_2671074_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	5.1e-100
AVT99491.1|2671560_2676570_-	glutamate dehydrogenase	NA	NA	NA	NA	NA
AVT99492.1|2676847_2677507_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AVT99493.1|2677521_2678829_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AVT99494.1|2678841_2682012_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AVT99495.1|2683495_2684554_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	1.8e-74
AVT99496.1|2684702_2685698_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AVT99497.1|2685858_2688375_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	28.5	6.3e-09
AVT99498.1|2688371_2689328_+	1-phosphofructokinase	NA	NA	NA	NA	NA
AVT99499.1|2689486_2691229_+	PTS fructose transporter subunit EIIBC	NA	NA	NA	NA	NA
AVU01098.1|2691547_2692684_+	carbohydrate porin	NA	NA	NA	NA	NA
AVT99500.1|2693078_2695841_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.4	3.6e-42
AVT99501.1|2696111_2696837_+	hypothetical protein	NA	NA	NA	NA	NA
AVU01099.1|2699222_2700239_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	2.5e-49
AVT99502.1|2700559_2700910_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99503.1|2700906_2701650_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99504.1|2701963_2703340_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.7	3.2e-63
>prophage 16
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	2899229	2957274	4735208	transposase	Ralstonia_phage(13.33%)	43	NA	NA
AVT99650.1|2899229_2900198_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
AVT99651.1|2901702_2902605_-	CAP domain-containing protein	NA	NA	NA	NA	NA
AVT99652.1|2902802_2904170_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.7	4.8e-112
AVT99653.1|2904421_2904934_+	DUF3060 domain-containing protein	NA	NA	NA	NA	NA
AVT99654.1|2904863_2905103_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
AVT99655.1|2905445_2906945_+	cupin domain-containing protein	NA	NA	NA	NA	NA
AVT99656.1|2906941_2907874_+	N-acetyltransferase	NA	NA	NA	NA	NA
AVT99657.1|2908054_2910883_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
AVT99658.1|2910925_2912128_+	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
AVT99659.1|2912369_2913806_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.8	3.7e-38
AVT99660.1|2914004_2914598_+	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	27.5	2.1e-11
AVU01116.1|2914862_2915456_+	DUF1949 domain-containing protein	NA	A0A1X9I5T8	Streptococcus_phage	41.2	8.1e-16
AVT99661.1|2915452_2917222_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.5	5.2e-58
AVT99662.1|2917464_2918319_+	RND transporter	NA	NA	NA	NA	NA
AVT99663.1|2918315_2919719_+	TolC family protein	NA	NA	NA	NA	NA
AVT99664.1|2920070_2920265_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99665.1|2920544_2921666_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
AVT99666.1|2921662_2922580_-	pyridoxal kinase	NA	NA	NA	NA	NA
AVT99667.1|2923107_2924238_-	molecular chaperone DnaJ	NA	Q8QNB4	Ectocarpus_siliculosus_virus	30.3	1.4e-24
AVT99668.1|2924397_2926323_-	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	50.6	2.2e-147
AVT99669.1|2926464_2926983_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AVT99670.1|2927083_2928136_-	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
AVT99671.1|2928252_2929917_+	DNA repair protein RecN	NA	NA	NA	NA	NA
AVT99672.1|2930359_2930785_-	ferric iron uptake transcriptional regulator	NA	NA	NA	NA	NA
AVT99673.1|2930874_2931270_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
AVT99674.1|2931616_2931892_-	RnfH family protein	NA	NA	NA	NA	NA
AVT99675.1|2931905_2932337_-	ubiquinone-binding protein	NA	NA	NA	NA	NA
AVT99676.1|2932397_2932901_+	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	41.9	5.8e-23
AVT99677.1|2933065_2935513_-	serine peptidase	NA	A0A218KC60	Bacillus_phage	26.7	2.6e-15
AVT99678.1|2937262_2938231_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	5.1e-100
AVT99679.1|2938453_2939830_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.3	7.3e-60
AVU01117.1|2940598_2941291_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99680.1|2942988_2944109_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.6	1.1e-42
AVT99681.1|2945103_2945352_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99682.1|2945628_2946783_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA	NA
AVT99683.1|2946782_2948105_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA	NA
AVU01118.1|2948131_2949172_+	dihydrorhizobitoxine desaturase	NA	NA	NA	NA	NA
AVU01119.1|2949189_2950050_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA	NA
AVT99684.1|2950085_2950685_+	LysE family translocator	NA	NA	NA	NA	NA
AVT99685.1|2950751_2951687_+	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
AVU01120.1|2951752_2953105_+	glutamine synthetase	NA	NA	NA	NA	NA
AVT99686.1|2953653_2955030_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
AVT99687.1|2956172_2957274_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	5.0e-43
>prophage 17
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	2964649	3015703	4735208	transposase,tRNA,protease	Ralstonia_phage(18.18%)	39	NA	NA
AVT99690.1|2964649_2965447_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AVT99691.1|2965455_2966910_-	deoxyribodipyrimidine photo-lyase	NA	A0A1V0S949	Catovirus	31.5	4.4e-47
AVT99692.1|2966976_2968407_-	replicative DNA helicase	NA	O80281	Escherichia_phage	53.6	3.8e-120
AVT99693.1|2968628_2969183_-	NADPH-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	34.1	1.2e-18
AVT99694.1|2969399_2971340_-	asparagine synthase (glutamine-hydrolyzing)	NA	A0A1B1ISV2	uncultured_Mediterranean_phage	30.8	2.6e-26
AVT99695.1|2971515_2972154_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
AVT99696.1|2976220_2977012_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AVT99697.1|2977157_2977373_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99698.1|2977372_2978140_+	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AVT99699.1|2978201_2979032_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AVT99700.1|2979104_2979533_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99701.1|2979664_2980144_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AVT99702.1|2980394_2980610_-	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	59.7	6.5e-16
AVT99703.1|2980576_2980810_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99704.1|2980837_2981323_+	DUF456 domain-containing protein	NA	NA	NA	NA	NA
AVT99705.1|2983941_2986173_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	59.7	1.5e-09
AVT99706.1|2986316_2987693_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.1	4.6e-78
AVT99707.1|2988811_2989780_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	5.6e-99
AVT99708.1|2990101_2991175_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99709.1|2991347_2992316_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.9e-99
AVT99710.1|2993406_2994042_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
AVT99711.1|2994177_2995695_-	fumarate hydratase	NA	NA	NA	NA	NA
AVT99712.1|2995734_2995995_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99713.1|2996029_2997910_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	38.9	5.2e-24
AVT99714.1|2998098_2998878_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
AVT99715.1|2998959_2999445_-	glutathione peroxidase	NA	A0A1S7DM81	Molluscum_contagiosum_virus	36.2	2.8e-14
AVT99716.1|2999422_2999671_-	hypothetical protein	NA	NA	NA	NA	NA
AVU01122.1|3001902_3002142_-	HTH domain-containing protein	NA	NA	NA	NA	NA
AVT99717.1|3002391_3003105_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99718.1|3004618_3005125_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
AVU01123.1|3005286_3005865_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99719.1|3005956_3006457_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AVT99720.1|3006523_3007369_-	hypothetical protein	NA	NA	NA	NA	NA
AVT99721.1|3007419_3007698_-	N-acetyltransferase	NA	NA	NA	NA	NA
AVT99722.1|3007917_3008106_+	hypothetical protein	NA	NA	NA	NA	NA
AVT99723.1|3008519_3009128_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
AVT99724.1|3010324_3012142_+	peptidase M14	NA	NA	NA	NA	NA
AVU01124.1|3012270_3014460_+	glycosyl hydrolase	NA	NA	NA	NA	NA
AVT99725.1|3014905_3015703_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	3537735	3558501	4735208	transposase,tRNA	Ralstonia_phage(60.0%)	14	NA	NA
AVU00073.1|3537735_3538704_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	1.6e-98
AVU00074.1|3539062_3539455_-	histone-like nucleoid-structuring protein	NA	NA	NA	NA	NA
AVU00075.1|3542598_3543567_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
AVU00076.1|3543811_3545188_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
AVU00077.1|3546190_3547311_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.6	1.1e-42
AVU01157.1|3548153_3549156_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.5	4.2e-97
AVU00078.1|3552240_3552441_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
AVU00079.1|3552803_3553598_+	thiazole synthase	NA	NA	NA	NA	NA
AVU00080.1|3553590_3553884_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00081.1|3553899_3554658_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
AVU00082.1|3554733_3556596_+	SLC13 family permease	NA	NA	NA	NA	NA
AVU00083.1|3556653_3556995_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA	NA
AVU00084.1|3557253_3557529_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00085.1|3557702_3558501_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	3646144	3706141	4735208	transposase,protease	Ralstonia_phage(25.0%)	48	NA	NA
AVU00150.1|3646144_3647521_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.0	6.0e-62
AVU00151.1|3647785_3648436_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00152.1|3648808_3650098_-	citrate synthase	NA	NA	NA	NA	NA
AVU00153.1|3650332_3650575_-	50S ribosomal protein L31 type B	NA	NA	NA	NA	NA
AVU00154.1|3650645_3651584_-	nucleoside hydrolase	NA	NA	NA	NA	NA
AVU00155.1|3651716_3653870_-	DNA helicase RecG	NA	NA	NA	NA	NA
AVU00156.1|3653890_3654271_-	RidA family protein	NA	NA	NA	NA	NA
AVU00157.1|3654350_3656522_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	38.8	2.8e-13
AVU00158.1|3656650_3656950_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AVU00159.1|3657218_3657830_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	31.5	1.8e-10
AVU00160.1|3657945_3658806_-	YicC family protein	NA	NA	NA	NA	NA
AVU00161.1|3658915_3659641_+	ribonuclease PH	NA	NA	NA	NA	NA
AVU00162.1|3660002_3660626_+	non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family	NA	C6K8R3	Cassava_brown_streak_virus	34.2	2.0e-12
AVU00163.1|3660641_3661799_+	YggW family oxidoreductase	NA	NA	NA	NA	NA
AVU00164.1|3661965_3664386_+	DUF1631 domain-containing protein	NA	NA	NA	NA	NA
AVU00165.1|3664382_3664730_+	PilZ domain-containing protein	NA	NA	NA	NA	NA
AVU01161.1|3664928_3666254_+	Xaa-Pro dipeptidase	NA	NA	NA	NA	NA
AVU00166.1|3667140_3668481_-	peptidase M24 family protein	NA	NA	NA	NA	NA
AVU01162.1|3668491_3669034_-	YecA family protein	NA	NA	NA	NA	NA
AVU01163.1|3669271_3669493_+	TIGR02449 family protein	NA	NA	NA	NA	NA
AVU00167.1|3669489_3669789_+	cell division protein ZapA	NA	NA	NA	NA	NA
AVU00168.1|3670399_3670990_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
AVU00169.1|3670986_3671457_+	EVE domain-containing protein	NA	NA	NA	NA	NA
AVU00170.1|3671548_3672196_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
AVU00171.1|3672350_3672800_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
AVU00172.1|3672949_3673831_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00173.1|3673880_3674120_-	rubredoxin	NA	NA	NA	NA	NA
AVU00174.1|3674143_3674767_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
AVU00175.1|3675190_3676645_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00176.1|3678674_3679964_+	glutamate-1-semialdehyde-2,1-aminomutase	NA	NA	NA	NA	NA
AVU00177.1|3680236_3680473_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00178.1|3680491_3683263_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AVU00179.1|3683341_3683791_-	azurin	NA	NA	NA	NA	NA
AVU00180.1|3685234_3685738_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00181.1|3686186_3687153_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	2.5e-99
AVU00182.1|3689734_3690352_+	hydrolase	NA	NA	NA	NA	NA
AVU00183.1|3690597_3691824_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	24.4	4.4e-16
AVU00184.1|3693993_3694791_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AVU00185.1|3694838_3695498_-	serine/threonine protein kinase	NA	NA	NA	NA	NA
AVU00186.1|3695649_3697737_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AVU00187.1|3697850_3698120_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00188.1|3698459_3699344_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00189.1|3699490_3700087_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AVU01164.1|3700086_3701445_-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
AVU00190.1|3701809_3702373_-	adenylate kinase	NA	A0A1B4XWI3	Tenacibaculum_phage	31.4	2.1e-13
AVU00191.1|3702532_3703789_+	6-phosphofructokinase	NA	NA	NA	NA	NA
AVU00192.1|3704088_3705057_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	2.3e-100
AVU00193.1|3705178_3706141_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 21
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	3892346	3898716	4735208		Enterobacteria_phage(50.0%)	6	NA	NA
AVU00313.1|3892346_3893693_+	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	26.9	2.6e-33
AVU00314.1|3893738_3895142_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	28.8	1.6e-41
AVU00315.1|3895258_3896167_-	dTDP-4-dehydrorhamnose reductase	NA	A0A1D7XFA3	Escherichia_phage	33.8	5.4e-27
AVU00316.1|3896163_3896721_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.1	1.7e-44
AVU00317.1|3896717_3897605_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	58.2	2.2e-94
AVU00318.1|3897660_3898716_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	48.0	4.3e-84
>prophage 22
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	4088734	4219271	4735208	tRNA,tail,protease,head,terminase,integrase,capsid,portal,transposase	Xanthomonas_phage(13.51%)	115	4096958:4096976	4217217:4217235
AVU00472.1|4088734_4089793_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	1.8e-74
AVU00473.1|4090676_4091453_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00474.1|4091449_4092766_+	amino acid permease	NA	NA	NA	NA	NA
AVU00475.1|4092978_4093260_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00476.1|4093432_4093765_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00477.1|4093819_4094254_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00478.1|4094438_4095617_+	PQQ-dependent sugar dehydrogenase	NA	NA	NA	NA	NA
AVU00479.1|4095781_4095985_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00480.1|4096156_4098328_-	beta-glucosidase	NA	NA	NA	NA	NA
4096958:4096976	attL	CTGCGCGGCATCGATGGCG	NA	NA	NA	NA
AVU00481.1|4098556_4098913_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AVU00482.1|4098992_4100057_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	57.4	5.1e-101
AVU00483.1|4100336_4100552_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
AVU01195.1|4101084_4101531_+	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	44.5	3.9e-23
AVU00484.1|4102551_4103610_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	1.8e-74
AVU00485.1|4104149_4105112_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
AVU00486.1|4105200_4106949_+	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	34.8	6.5e-45
AVU00487.1|4107226_4108328_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	5.0e-43
AVU00488.1|4108342_4108729_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00489.1|4108953_4110000_+	bile acid:sodium symporter	NA	NA	NA	NA	NA
AVU01196.1|4110183_4111764_+	thiol reductase thioredoxin	NA	NA	NA	NA	NA
AVU00490.1|4112162_4113050_-	protoheme IX farnesyltransferase	NA	NA	NA	NA	NA
AVU00491.1|4113052_4114216_-	heme A synthase	NA	NA	NA	NA	NA
AVU00492.1|4114226_4114802_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00493.1|4114829_4115552_-	SURF1 family protein	NA	NA	NA	NA	NA
AVU00494.1|4115612_4115831_+	twin transmembrane helix small protein	NA	NA	NA	NA	NA
AVU00495.1|4115923_4116799_-	cytochrome c oxidase subunit 3	NA	NA	NA	NA	NA
AVU00496.1|4116837_4117434_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
AVU00497.1|4117430_4117604_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00498.1|4117584_4119189_-	cytochrome c oxidase subunit I	NA	NA	NA	NA	NA
AVU00499.1|4119227_4120181_-	cytochrome c oxidase subunit II	NA	NA	NA	NA	NA
AVU01197.1|4120197_4120629_-	DUF2244 domain-containing protein	NA	NA	NA	NA	NA
AVU00500.1|4120950_4124151_+	bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	NA	NA	NA	NA	NA
AVU00501.1|4126033_4127153_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	3.0e-43
AVU01198.1|4133662_4134874_-|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
AVU00502.1|4135044_4136463_+	hypothetical protein	NA	A0A0K2CNY2	Brevibacillus_phage	37.9	6.9e-13
AVU00503.1|4136833_4137967_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
AVU00504.1|4138004_4138232_-	hypothetical protein	NA	NA	NA	NA	NA
AVU01199.1|4138290_4139511_-	MFS transporter	NA	NA	NA	NA	NA
AVU00505.1|4139905_4140706_-	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	29.0	3.1e-26
AVU00506.1|4141029_4141305_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00507.1|4141748_4142006_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00508.1|4141969_4143181_-	DUF1173 domain-containing protein	NA	NA	NA	NA	NA
AVU00509.1|4143350_4143614_-	PAAR domain-containing protein	NA	A4JWV5	Burkholderia_virus	43.4	9.8e-06
AVU00510.1|4143610_4145308_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00511.1|4145304_4147455_-	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	28.5	3.0e-28
AVU00512.1|4147523_4150247_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	30.2	2.6e-69
AVU00513.1|4150629_4150830_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00514.1|4150924_4151719_-	restriction endonuclease subunit M	NA	B7SYF3	Stenotrophomonas_phage	79.9	2.9e-125
AVU00515.1|4151834_4152566_-	hypothetical protein	NA	A0A1V0DY81	Dinoroseobacter_phage	40.7	4.3e-35
AVU00516.1|4152567_4156428_-	hypothetical protein	NA	A0A1I9L2F3	Xanthomonas_phage	53.7	0.0e+00
AVU01200.1|4156508_4156874_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00517.1|4156852_4157728_-	DUF2163 domain-containing protein	NA	A0A1I9L2F1	Xanthomonas_phage	50.7	3.7e-81
AVU00518.1|4157724_4158327_-	hypothetical protein	NA	A0A1I9L2F0	Xanthomonas_phage	52.7	2.3e-50
AVU00519.1|4158329_4161875_-|tail	phage tail tape measure protein	tail	A5H1M1	Xanthomonas_virus	39.7	4.0e-33
AVU00520.1|4162030_4163176_+	DUF4236 domain-containing protein	NA	NA	NA	NA	NA
AVU01201.1|4163419_4163638_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00521.1|4163739_4164090_-	hypothetical protein	NA	G9FHI3	Rhodococcus_phage	50.4	1.5e-22
AVU00522.1|4164093_4164546_-|tail	phage tail protein	tail	NA	NA	NA	NA
AVU00523.1|4164611_4164947_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
AVU00524.1|4164943_4165345_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00525.1|4165337_4165670_-|head,tail	head-tail adaptor protein	head,tail	C7BGH2	Burkholderia_phage	38.9	4.3e-06
AVU00526.1|4165666_4166083_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A286S294	Klebsiella_phage	37.7	3.5e-05
AVU00527.1|4166086_4166311_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00528.1|4166368_4167613_-|capsid	phage major capsid protein	capsid	C7BGH0	Burkholderia_phage	45.9	8.6e-92
AVU00529.1|4167678_4168407_-|protease	Clp protease ClpP	protease	C7BGG9	Burkholderia_phage	54.9	1.1e-49
AVU00530.1|4168369_4169689_-|portal	phage portal protein	portal	C7BGG8	Burkholderia_phage	37.8	2.8e-61
AVU00531.1|4169688_4171365_-|terminase	terminase large subunit	terminase	A0A0U4B0C7	Pseudomonas_phage	71.5	6.1e-234
AVU00532.1|4171367_4171748_-	hypothetical protein	NA	A0A0U4JIP6	Pseudomonas_phage	53.2	8.8e-32
AVU01202.1|4171849_4172248_-	HNH endonuclease	NA	A0A2D1GNP5	Pseudomonas_phage	42.7	2.4e-11
AVU00533.1|4172423_4172705_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00534.1|4172819_4173095_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00535.1|4173091_4173508_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00536.1|4173590_4173812_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00537.1|4173808_4174153_-	hypothetical protein	NA	NA	NA	NA	NA
AVU01203.1|4174149_4174584_-	lysozyme	NA	D5LH07	Escherichia_phage	67.6	1.4e-49
AVU00538.1|4174746_4175031_-|tRNA	methionyl-tRNA formyltransferase	tRNA	NA	NA	NA	NA
AVU00539.1|4175166_4175721_-	hypothetical protein	NA	NA	NA	NA	NA
AVU01204.1|4175713_4175902_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00540.1|4176005_4177361_-	DNA helicase	NA	O80281	Escherichia_phage	36.0	2.9e-53
AVU01205.1|4177357_4177657_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00541.1|4178241_4178862_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AVU00542.1|4178920_4179208_-	hypothetical protein	NA	NA	NA	NA	NA
AVU01206.1|4179299_4179992_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AVU01207.1|4180254_4180632_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00543.1|4180698_4180887_+	carbon storage regulator	NA	NA	NA	NA	NA
AVU01208.1|4181090_4181321_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
AVU00544.1|4181247_4182447_-|integrase	site-specific integrase	integrase	B7SYF8	Stenotrophomonas_phage	36.2	1.4e-62
AVU00545.1|4182781_4183441_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
AVU00546.1|4183463_4184222_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00547.1|4184259_4185057_+	ParA family protein	NA	Q8JL10	Natrialba_phage	30.3	9.5e-20
AVU00548.1|4185056_4185983_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	34.9	1.0e-12
AVU00549.1|4186018_4186327_+	mitomycin resistance protein	NA	NA	NA	NA	NA
AVU00550.1|4186531_4187497_+	KR domain-containing protein	NA	A0A1V0SKV4	Klosneuvirus	30.5	1.6e-29
AVU00551.1|4187863_4188586_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AVU00552.1|4188585_4188927_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00553.1|4189344_4189893_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00554.1|4190000_4192349_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	29.5	4.5e-49
AVU00555.1|4192362_4192830_-	dUTP diphosphatase	NA	Q2NP83	Xanthomonas_phage	96.1	1.1e-79
AVU00556.1|4192826_4194101_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	31.2	5.8e-35
AVU01209.1|4194197_4194875_+	JAB domain-containing protein	NA	NA	NA	NA	NA
AVU00557.1|4194962_4196651_+|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AVU00558.1|4196830_4197712_+	sporulation protein	NA	NA	NA	NA	NA
AVU00559.1|4197718_4198198_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00560.1|4198289_4199045_+	KR domain-containing protein	NA	NA	NA	NA	NA
AVU00561.1|4200424_4204327_-	avirulence protein	NA	NA	NA	NA	NA
AVU00562.1|4206848_4208735_-	arginine decarboxylase	NA	NA	NA	NA	NA
AVU00563.1|4208973_4209831_+	polyamine aminopropyltransferase	NA	A0A1C9C533	Heterosigma_akashiwo_virus	32.5	2.2e-14
AVU00564.1|4210269_4210881_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00565.1|4211073_4211886_-	hypothetical protein	NA	NA	NA	NA	NA
AVU01210.1|4212564_4213101_+	kinase	NA	NA	NA	NA	NA
AVU00566.1|4213449_4215435_-	beta-N-acetylglucosaminidase	NA	NA	NA	NA	NA
AVU01211.1|4216048_4216387_-	transcriptional regulator	NA	NA	NA	NA	NA
AVU00567.1|4216576_4216855_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00568.1|4216871_4218392_+|protease	ATP-dependent protease	protease	NA	NA	NA	NA
4217217:4217235	attR	CTGCGCGGCATCGATGGCG	NA	NA	NA	NA
AVU00569.1|4218472_4219271_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	4398433	4458422	4735208	transposase	Ralstonia_phage(37.5%)	44	NA	NA
AVU00697.1|4398433_4399810_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.6	1.3e-61
AVU00698.1|4400023_4400695_+	4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase	NA	NA	NA	NA	NA
AVU01231.1|4401800_4401974_+	4-oxalomesaconate hydratase	NA	NA	NA	NA	NA
AVU00699.1|4401970_4402993_+	amidohydrolase	NA	NA	NA	NA	NA
AVU00700.1|4403382_4403550_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
AVU00701.1|4403563_4403800_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
AVU00702.1|4403984_4404344_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00703.1|4404374_4404602_+	hypothetical protein	NA	NA	NA	NA	NA
AVU01232.1|4406823_4407462_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
AVU01233.1|4407684_4409313_+	alkaline phosphatase	NA	NA	NA	NA	NA
AVU00704.1|4411086_4411683_-	4-phosphopantetheinyl transferase	NA	NA	NA	NA	NA
AVU00705.1|4411809_4412061_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AVU00706.1|4412122_4412560_-	GFA family protein	NA	NA	NA	NA	NA
AVU00707.1|4412556_4413336_-	exodeoxyribonuclease III	NA	NA	NA	NA	NA
AVU00708.1|4415014_4416742_-	cation acetate symporter	NA	NA	NA	NA	NA
AVU00709.1|4416738_4417056_-	DUF485 domain-containing protein	NA	NA	NA	NA	NA
AVU00710.1|4418821_4420765_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	37.8	8.7e-83
AVU00711.1|4421026_4421695_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AVU00712.1|4422959_4423163_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00713.1|4424516_4424738_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00714.1|4424734_4425745_+	aldo/keto reductase	NA	NA	NA	NA	NA
AVU00715.1|4425741_4426614_+	amidohydrolase	NA	NA	NA	NA	NA
AVU00716.1|4426610_4427381_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AVU00717.1|4427550_4428408_+	FAA hydrolase family protein	NA	NA	NA	NA	NA
AVU00718.1|4428930_4430250_+	L-fuconate dehydratase	NA	NA	NA	NA	NA
AVU00719.1|4430744_4431713_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.9e-99
AVU01234.1|4431838_4432204_-	L-rhamnose mutarotase	NA	NA	NA	NA	NA
AVU00720.1|4432200_4433502_-	L-fucose:H+ symporter permease	NA	NA	NA	NA	NA
AVU00721.1|4433682_4434459_+	transcriptional regulator	NA	NA	NA	NA	NA
AVU01235.1|4434935_4435520_+	hypothetical protein	NA	NA	NA	NA	NA
AVU01236.1|4435712_4439162_-	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA	NA
AVU00722.1|4439913_4442556_+	hypothetical protein	NA	NA	NA	NA	NA
AVU01237.1|4442659_4445059_-	NdvB protein	NA	NA	NA	NA	NA
AVU00723.1|4445061_4446444_-	MFS transporter	NA	NA	NA	NA	NA
AVU00724.1|4446601_4447186_+	gluconokinase	NA	NA	NA	NA	NA
AVU00725.1|4448021_4449752_+	polyvinylalcohol dehydrogenase	NA	A0A0M4JT37	Mollivirus	36.1	1.7e-82
AVU00726.1|4449849_4450107_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00727.1|4450083_4450389_-	hypothetical protein	NA	NA	NA	NA	NA
AVU01238.1|4450291_4450732_-	3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
AVU00728.1|4450751_4451180_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00729.1|4451338_4452458_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.6	1.5e-42
AVU00730.1|4453915_4455035_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	3.0e-43
AVU00731.1|4455054_4456023_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.9e-99
AVU00732.1|4457453_4458422_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
>prophage 24
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	4469096	4548377	4735208	transposase,tRNA	Acidithiobacillus_phage(20.0%)	52	NA	NA
AVU00737.1|4469096_4471355_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AVU00738.1|4471512_4472421_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AVU00739.1|4472510_4474325_+	type II/IV secretion system protein	NA	NA	NA	NA	NA
AVU01239.1|4474718_4483352_-	hypothetical protein	NA	A0A1S5SDF1	Streptococcus_phage	32.0	1.4e-10
AVU00740.1|4484129_4484882_+	GMP synthase	NA	NA	NA	NA	NA
AVU00741.1|4484941_4485841_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00742.1|4485993_4486749_-	twin-arginine translocase subunit TatC	NA	NA	NA	NA	NA
AVU00743.1|4486745_4487318_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
AVU00744.1|4487333_4487561_-	twin-arginine translocase subunit TatA	NA	NA	NA	NA	NA
AVU00745.1|4487633_4488539_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00746.1|4488692_4489658_+	ferrochelatase	NA	NA	NA	NA	NA
AVU01240.1|4489660_4490512_+	alpha/beta hydrolase	NA	R4JP33	Mycobacterium_phage	31.3	1.3e-06
AVU00747.1|4490592_4491051_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00748.1|4491321_4492107_-	M48 family peptidase	NA	NA	NA	NA	NA
AVU00749.1|4492082_4492328_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00750.1|4492722_4493628_-	recombination-associated protein RdgC	NA	S4TWL4	Salmonella_phage	33.2	1.4e-43
AVU00751.1|4493691_4494609_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	62.5	3.1e-83
AVU00752.1|4494699_4495239_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00753.1|4495242_4496580_+	xylose isomerase	NA	NA	NA	NA	NA
AVU00754.1|4496704_4497763_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	1.8e-74
AVU00755.1|4497894_4498962_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AVU00756.1|4499137_4501333_+	alpha-glucuronidase	NA	NA	NA	NA	NA
AVU00757.1|4501329_4503294_+	9-O-acetylesterase	NA	NA	NA	NA	NA
AVU00758.1|4503305_4504565_+	D-galactonate dehydratase family protein	NA	Q6A202	Oenococcus_phage	26.0	7.7e-40
AVU01241.1|4504564_4506265_+	glycoside hydrolase family 43 protein	NA	NA	NA	NA	NA
AVU00759.1|4509333_4510797_+	mannitol dehydrogenase family protein	NA	G8DCZ3	Micromonas_pusilla_virus	31.6	2.9e-46
AVU00760.1|4510848_4511907_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	1.2e-75
AVU00761.1|4512062_4513439_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
AVU00762.1|4513615_4514719_+	restriction endonuclease	NA	A0A1S5SAB0	Streptococcus_phage	40.4	9.4e-58
AVU00763.1|4514810_4515185_-	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA	NA
AVU01242.1|4515885_4516902_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	1.9e-49
AVU00764.1|4517034_4518411_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
AVU00765.1|4519044_4520100_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00766.1|4520326_4521745_-	glucuronate isomerase	NA	NA	NA	NA	NA
AVU00767.1|4521785_4522763_-	1,4-beta-xylanase	NA	NA	NA	NA	NA
AVU00768.1|4524167_4525649_-	MFS transporter	NA	NA	NA	NA	NA
AVU00769.1|4525990_4528864_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AVU00770.1|4528962_4530450_+	MFS transporter	NA	NA	NA	NA	NA
AVU00771.1|4530481_4531516_+	alpha-N-arabinofuranosidase	NA	NA	NA	NA	NA
AVU00772.1|4531857_4532391_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00773.1|4532672_4533641_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	6.6e-100
AVU00774.1|4534107_4534913_-|transposase	IS5/IS1182 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	36.0	7.7e-09
AVU01243.1|4535114_4535687_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00775.1|4535825_4536044_+	DUF465 domain-containing protein	NA	NA	NA	NA	NA
AVU00776.1|4536189_4536444_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00777.1|4536680_4537661_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
AVU00778.1|4537856_4540520_-	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA	NA
AVU00779.1|4540519_4541494_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00780.1|4541492_4541738_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00781.1|4541906_4542959_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AVU00782.1|4543123_4546162_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00783.1|4547000_4548377_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.7	3.2e-63
>prophage 25
CP025609	Xanthomonas oryzae pv. oryzae strain MAI1 chromosome, complete genome	4735208	4565840	4711879	4735208	transposase	Acidithiobacillus_phage(27.78%)	107	NA	NA
AVU00792.1|4565840_4567217_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
AVU00793.1|4573695_4575600_-	PAS domain-containing protein	NA	Q6XLU9	Feldmannia_irregularis_virus	27.7	3.0e-19
AVU00794.1|4575596_4576199_-	biliverdin-producing heme oxygenase	NA	NA	NA	NA	NA
AVU00795.1|4576299_4577559_-	tetracycline resistance MFS efflux pump	NA	NA	NA	NA	NA
AVU00796.1|4577849_4580012_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
AVU00797.1|4580164_4580371_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00798.1|4580578_4580968_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00799.1|4581025_4581847_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00800.1|4581971_4583348_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.3	4.3e-60
AVU00801.1|4583479_4584661_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00802.1|4584758_4588190_-	ATP-binding protein	NA	NA	NA	NA	NA
AVU00803.1|4588337_4589036_-	DUF4194 domain-containing protein	NA	NA	NA	NA	NA
AVU00804.1|4589019_4590492_-	DUF3375 domain-containing protein	NA	NA	NA	NA	NA
AVU00805.1|4590488_4591076_-	DUF4276 domain-containing protein	NA	NA	NA	NA	NA
AVU00806.1|4591075_4592272_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
AVU00807.1|4592345_4592975_-	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	49.5	4.2e-47
AVU00808.1|4593068_4593566_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AVU00809.1|4594979_4595504_+	FUSC family protein	NA	NA	NA	NA	NA
AVU01246.1|4595475_4596492_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.3	5.6e-49
AVU00810.1|4596492_4596711_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00811.1|4596898_4598260_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	27.1	5.8e-33
AVU00812.1|4598440_4599817_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	48.1	9.9e-65
AVU01247.1|4600505_4601219_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00813.1|4601249_4601756_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00814.1|4602029_4602236_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00815.1|4602222_4603335_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AVU00816.1|4603549_4604669_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.6	3.3e-42
AVU01248.1|4604731_4605376_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00817.1|4605548_4606343_-	peptidase	NA	NA	NA	NA	NA
AVU01249.1|4606513_4606987_+	SRPBCC domain-containing protein	NA	NA	NA	NA	NA
AVU00818.1|4609469_4609799_-	thioredoxin	NA	A0A0K1Y9C9	Streptomyces_phage	32.5	7.2e-06
AVU00819.1|4609819_4610218_-	host attachment protein	NA	NA	NA	NA	NA
AVU01250.1|4610309_4611008_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00820.1|4611177_4611648_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
AVU00821.1|4613395_4614772_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.0	6.0e-62
AVU00822.1|4615296_4615608_+	hypothetical protein	NA	NA	NA	NA	NA
AVU01251.1|4615867_4616350_-	ATPase	NA	NA	NA	NA	NA
AVU01252.1|4616646_4617816_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
AVU00823.1|4618057_4618246_+	CsbD family protein	NA	NA	NA	NA	NA
AVU00824.1|4618890_4619148_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00825.1|4619272_4619722_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00826.1|4619941_4620859_+	hypothetical protein	NA	K7PHD1	Enterobacteria_phage	47.3	1.7e-68
AVU00827.1|4622177_4624958_-	TonB-dependent receptor	NA	NA	NA	NA	NA
AVU00828.1|4625244_4626267_+	sugar kinase	NA	NA	NA	NA	NA
AVU01253.1|4626894_4628103_-	enoyl-[acyl-carrier-protein] reductase FabV	NA	NA	NA	NA	NA
AVU00829.1|4630074_4631241_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AVU00830.1|4633192_4634569_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	54.8	1.0e-77
AVU00831.1|4634579_4634873_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00832.1|4634983_4637179_-	TonB-dependent receptor	NA	A0A1B0VCF0	Salmonella_phage	40.6	2.4e-65
AVU00833.1|4637277_4638480_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AVU00834.1|4638750_4639761_+	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	37.8	7.3e-49
AVU00835.1|4640035_4640503_+	DUF4410 domain-containing protein	NA	NA	NA	NA	NA
AVU00836.1|4641879_4643256_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.0	6.0e-62
AVU00837.1|4643399_4644776_-|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.1	4.6e-78
AVU00838.1|4644891_4645215_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00839.1|4645321_4646290_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	4.3e-99
AVU00840.1|4647318_4649754_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00841.1|4649764_4650541_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00842.1|4650562_4651858_+	hypothetical protein	NA	NA	NA	NA	NA
AVU01254.1|4651877_4654004_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	26.3	7.9e-29
AVU01255.1|4654260_4655490_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.6	2.0e-61
AVU00843.1|4655595_4656972_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.6	5.1e-61
AVU01256.1|4658320_4658731_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
AVU00844.1|4658990_4659446_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00845.1|4659378_4659576_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00846.1|4659669_4660557_-	pseudouridylate synthase	NA	NA	NA	NA	NA
AVU00847.1|4660890_4662468_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00848.1|4662962_4663790_+	restriction endonuclease	NA	NA	NA	NA	NA
AVU00849.1|4664516_4665575_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	42.9	2.6e-73
AVU00850.1|4665731_4665914_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00851.1|4667300_4668420_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	3.0e-43
AVU00852.1|4668657_4669218_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00853.1|4669216_4670185_+|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.9e-99
AVU00854.1|4670653_4671391_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00855.1|4671408_4672101_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00856.1|4673294_4674320_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	1.9e-49
AVU00857.1|4674357_4674690_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00858.1|4674682_4675159_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AVU00859.1|4675161_4675596_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
AVU00860.1|4675711_4675957_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00861.1|4675957_4676152_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00862.1|4676293_4676626_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00863.1|4676874_4676973_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00864.1|4677075_4678470_-	type III secretion system effector protein	NA	NA	NA	NA	NA
AVU00865.1|4679625_4679904_-	plasmid maintenance system killer protein	NA	A0A222YWE2	Escherichia_phage	37.0	2.9e-08
AVU00866.1|4680001_4682263_-	exodeoxyribonuclease V subunit alpha	NA	A0A0N9S864	Staphylococcus_phage	44.9	1.5e-09
AVU00867.1|4682450_4686512_-	exodeoxyribonuclease V subunit beta	NA	S5MMD7	Bacillus_phage	22.5	3.2e-10
AVU00868.1|4686508_4689922_-	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA	NA
AVU00869.1|4690247_4690940_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	24.2	9.8e-05
AVU00870.1|4690951_4692088_-	hypothetical protein	NA	NA	NA	NA	NA
AVU00871.1|4692227_4693196_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
AVU01257.1|4693375_4694371_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	61.3	1.2e-96
AVU00872.1|4695947_4696637_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	1.8e-35
AVU00873.1|4696649_4697807_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00874.1|4697819_4699130_+	ABC transporter permease	NA	NA	NA	NA	NA
AVU00875.1|4699311_4700431_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.6	1.1e-42
AVU00876.1|4700756_4701551_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.5	5.8e-09
AVU00877.1|4701550_4702300_+	ABC transporter permease	NA	NA	NA	NA	NA
AVU00878.1|4702311_4702863_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
AVU00879.1|4702859_4703522_+	organic solvent ABC transporter	NA	NA	NA	NA	NA
AVU00880.1|4703511_4703802_+	STAS domain-containing protein	NA	NA	NA	NA	NA
AVU00881.1|4703812_4704871_+	hypothetical protein	NA	NA	NA	NA	NA
AVU00882.1|4704943_4705465_-	FRG domain-containing protein	NA	NA	NA	NA	NA
AVU00883.1|4705552_4706929_+|transposase	IS5/IS1182 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.7	3.2e-63
AVU01258.1|4707297_4707843_-	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	34.5	2.0e-16
AVU01259.1|4708982_4710563_-	DNA recombination protein RmuC	NA	NA	NA	NA	NA
AVU00884.1|4710910_4711879_-|transposase	IS5/IS1182 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.5e-99
