The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	0	8386	2928142	tRNA	Streptococcus_phage(66.67%)	9	NA	NA
AVR90494.1|19_559_-	serine O-acetyltransferase	NA	NA	NA	NA	NA
AVR93305.1|555_735_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90495.1|828_2286_-|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
AVR90496.1|2338_2812_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
AVR90497.1|2830_3976_-	PIN/TRAM domain-containing protein	NA	NA	NA	NA	NA
AVR90498.1|4076_5447_-	DNA repair protein RadA	NA	NA	NA	NA	NA
AVR90499.1|5525_6005_-	dUTP diphosphatase	NA	A0A249XZY3	Enterococcus_phage	68.9	8.8e-37
AVR90500.1|6330_7146_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.9	4.2e-47
AVR90501.1|7132_8386_+	gamma-glutamyl-phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	57.5	3.4e-120
>prophage 2
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	30564	36482	2928142		Tupanvirus(25.0%)	4	NA	NA
AVR90521.1|30564_32196_+	ABC-F family ATPase	NA	A0A2K9L3Z8	Tupanvirus	26.6	6.9e-49
AVR90522.1|32591_33461_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	31.4	1.1e-13
AVR90523.1|33585_34878_-	adenylosuccinate synthetase	NA	G5CQQ4	Megavirus	35.7	3.1e-68
AVR90524.1|35114_36482_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	57.1	1.5e-134
>prophage 3
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	39658	48320	2928142		Bacillus_virus(50.0%)	7	NA	NA
AVR90528.1|39658_40225_-	single-stranded DNA-binding protein	NA	A0A097PAQ3	Streptococcus_pyogenes_phage	73.0	1.4e-44
AVR90529.1|40269_40572_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
AVR90530.1|40746_43248_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	34.1	8.5e-99
AVR90531.1|43303_45253_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.0	7.0e-141
AVR90532.1|45249_46377_-	DNA replication and repair protein RecF	NA	NA	NA	NA	NA
AVR90533.1|46363_46609_-	S4 domain-containing protein YaaA	NA	NA	NA	NA	NA
AVR90534.1|47189_48320_-	DNA polymerase III subunit beta	NA	A0A0A8IL17	Aurantimonas_phage	26.1	7.6e-31
>prophage 4
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	75569	76370	2928142		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
AVR90557.1|75569_76370_+	sorbitol-6-phosphate 2-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.2	7.9e-06
>prophage 5
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	80703	81381	2928142		Cyanophage(100.0%)	1	NA	NA
AVR90563.1|80703_81381_+	fructose-6-phosphate aldolase	NA	M4SIN4	Cyanophage	31.5	1.8e-19
>prophage 6
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	85879	87524	2928142		Natrialba_phage(50.0%)	2	NA	NA
AVR90568.1|85879_86641_+	ParA family protein	NA	Q8JL10	Natrialba_phage	32.3	3.7e-29
AVR90569.1|86633_87524_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	32.9	5.5e-16
>prophage 7
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	91803	96920	2928142	tRNA	Bacillus_phage(50.0%)	4	NA	NA
AVR90574.1|91803_93285_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.1	1.6e-97
AVR90575.1|93453_94725_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.6	3.9e-92
AVR90576.1|95059_96241_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	27.5	7.7e-26
AVR90577.1|96230_96920_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	38.5	1.6e-39
>prophage 8
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	107609	113649	2928142	protease	Klebsiella_phage(50.0%)	4	NA	NA
AVR90583.1|107609_110105_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A0A8J958	Klebsiella_phage	39.5	1.5e-127
AVR90584.1|110238_111273_+	FUSC family protein	NA	NA	NA	NA	NA
AVR90585.1|111453_112374_+	U32 family peptidase	NA	NA	NA	NA	NA
AVR90586.1|112401_113649_+|protease	collagenase-like protease	protease	Q6DW11	Phage_TP	34.2	1.1e-43
>prophage 9
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	120733	127999	2928142		Pandoravirus(40.0%)	10	NA	NA
AVR90592.1|120733_121873_+	ImmA/IrrE family metallo-endopeptidase	NA	B6SBZ6	Clostridium_virus	33.2	5.1e-43
AVR90593.1|121895_122294_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90594.1|122379_123729_+	glutathione-disulfide reductase	NA	NA	NA	NA	NA
AVR90595.1|123926_124289_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AVR90596.1|124289_124775_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AVR90597.1|124768_125338_+	GTP cyclohydrolase I FolE	NA	S4VV34	Pandoravirus	49.1	2.0e-32
AVR90598.1|125341_125935_+	non-canonical purine NTP pyrophosphatase	NA	A0A1K0ISQ7	Cassava_brown_streak_virus	34.3	1.5e-09
AVR90599.1|125927_126719_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.5	1.6e-22
AVR90600.1|126759_126861_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90601.1|127633_127999_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SEX8	Streptococcus_phage	42.5	6.1e-14
>prophage 10
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	149972	158119	2928142		Streptococcus_phage(33.33%)	4	NA	NA
AVR90620.1|149972_150314_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SAB3	Streptococcus_phage	43.3	1.4e-17
AVR90621.1|150487_150667_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90622.1|150675_154299_+	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.5	2.0e-48
AVR90623.1|154465_158119_+	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.8	2.4e-65
>prophage 11
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	161419	165135	2928142		Lactobacillus_virus(50.0%)	5	NA	NA
AVR90626.1|161419_161887_+	DNA starvation/stationary phase protection protein	NA	C1KFH1	Lactobacillus_virus	25.9	1.0e-05
AVR90627.1|161939_162047_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90628.1|162108_162552_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
AVR90629.1|162565_162958_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
AVR90630.1|163977_165135_+	DNA (cytosine-5-)-methyltransferase	NA	A0A0E3DF50	Bacillus_phage	29.5	7.8e-31
>prophage 12
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	179138	180074	2928142		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
AVR90641.1|179138_180074_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.4	2.4e-22
>prophage 13
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	186253	194217	2928142	holin	Planktothrix_phage(33.33%)	9	NA	NA
AVR90649.1|186253_186976_+	metal ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	9.2e-22
AVR90650.1|186972_187644_+	ABC transporter permease	NA	NA	NA	NA	NA
AVR90651.1|187656_188475_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90652.1|188566_190306_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	29.6	5.4e-60
AVR90653.1|190316_191045_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AVR90654.1|191196_191616_+|holin	antiholin LrgA	holin	NA	NA	NA	NA
AVR90655.1|191612_192296_+|holin	antiholin LrgB	holin	NA	NA	NA	NA
AVR90656.1|192492_193038_-	cysteine hydrolase	NA	NA	NA	NA	NA
AVR90657.1|193203_194217_+	alpha/beta hydrolase	NA	A0A0G2Y6Q1	Acanthamoeba_polyphaga_mimivirus	22.6	3.9e-10
>prophage 14
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	211847	215652	2928142		Clostridium_phage(50.0%)	3	NA	NA
AVR90673.1|211847_213056_-	hypothetical protein	NA	A0A0A7RU41	Clostridium_phage	55.6	1.8e-06
AVR90674.1|213247_214492_+	competence/damage-inducible protein A	NA	NA	NA	NA	NA
AVR90675.1|214605_215652_+	DNA recombination/repair protein RecA	NA	A0A0S2MVG1	Bacillus_phage	66.1	1.4e-127
>prophage 15
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	219022	226057	2928142		Catovirus(33.33%)	4	NA	NA
AVR90680.1|219022_221599_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	26.1	2.3e-38
AVR90681.1|221630_223763_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	38.3	2.1e-53
AVR90682.1|224473_224911_+	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA	NA
AVR90683.1|225085_226057_+	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	32.0	1.7e-42
>prophage 16
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	232125	232839	2928142		Streptomyces_phage(100.0%)	1	NA	NA
AVR90687.1|232125_232839_+	trehalose operon repressor	NA	A0A291LID1	Streptomyces_phage	42.2	3.1e-06
>prophage 17
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	243679	245593	2928142		Cyanophage(50.0%)	2	NA	NA
AVR90699.1|243679_244579_+	6-phosphogluconate dehydrogenase (decarboxylating)	NA	M4QGJ9	Cyanophage	34.3	1.8e-51
AVR90700.1|244591_245593_+	hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	26.8	2.0e-19
>prophage 18
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	255303	264556	2928142	tRNA	Mollivirus(25.0%)	8	NA	NA
AVR90712.1|255303_255918_+	guanylate kinase	NA	A0A0M5KCK5	Mollivirus	33.6	4.8e-11
AVR93188.1|255925_256225_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AVR90713.1|256379_258812_+	primosomal protein N'	NA	NA	NA	NA	NA
AVR90714.1|258838_259333_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	41.1	1.2e-15
AVR90715.1|259325_260267_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	31.0	1.1e-09
AVR90716.1|260272_261652_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
AVR90717.1|261653_262403_+	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
AVR90718.1|262399_264556_+	serine/threonine protein kinase IreK	NA	F2WL08	Lausannevirus	29.7	4.4e-19
>prophage 19
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	267573	271308	2928142	transposase	Staphylococcus_phage(50.0%)	3	NA	NA
AVR90723.1|267573_268482_+	DUF4162 domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.7	3.9e-25
AVR90724.1|268474_269716_+	ABC transporter permease	NA	NA	NA	NA	NA
AVR90725.1|270348_271308_+|transposase	IS30-like element IS1062 family transposase	transposase	H7BW61	unidentified_phage	25.7	4.1e-09
>prophage 20
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	279322	281274	2928142		Bacillus_virus(100.0%)	2	NA	NA
AVR90732.1|279322_280330_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.3	5.1e-18
AVR90733.1|280329_281274_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.6	2.1e-21
>prophage 21
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	285323	286016	2928142		Acanthamoeba_polyphaga_lentillevirus(100.0%)	1	NA	NA
AVR90737.1|285323_286016_+	ribonuclease 3	NA	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	31.7	9.8e-29
>prophage 22
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	292093	292579	2928142		Pandoravirus(100.0%)	1	NA	NA
AVR90742.1|292093_292579_+	cupin domain-containing protein	NA	A0A291ATU0	Pandoravirus	36.2	5.6e-15
>prophage 23
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	298972	301634	2928142		uncultured_Caudovirales_phage(50.0%)	3	NA	NA
AVR90748.1|298972_299920_+	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	44.0	3.4e-72
AVR90749.1|299916_300882_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AVR90750.1|300878_301634_+	iron ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.4	5.1e-15
>prophage 24
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	321273	321837	2928142		Synechococcus_phage(100.0%)	1	NA	NA
AVR90766.1|321273_321837_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.1	1.6e-13
>prophage 25
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	351345	527851	2928142	integrase,portal,capsid,tRNA,transposase,head,holin,protease,terminase,tail	Erysipelothrix_phage(40.68%)	168	432175:432193	434677:434695
AVR90803.1|351345_352644_-|protease	serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	29.1	1.4e-20
AVR90804.1|353044_353524_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
AVR90805.1|353705_354665_+|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
AVR90806.1|354686_355871_+	DUF262 domain-containing protein	NA	A0A0R6PKN1	Moraxella_phage	28.5	1.9e-19
AVR93191.1|355915_356908_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90807.1|357222_358611_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
AVR90808.1|358958_359468_+	DinB family protein	NA	NA	NA	NA	NA
AVR90809.1|359605_360070_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90810.1|360072_360999_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90811.1|361150_362932_+	DNA-binding protein	NA	NA	NA	NA	NA
AVR90812.1|363043_363784_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AVR90813.1|363807_364767_+	restriction endonuclease	NA	NA	NA	NA	NA
AVR90814.1|364882_365266_+	two pore domain potassium channel family protein	NA	NA	NA	NA	NA
AVR90815.1|365394_366657_+	serine/threonine transporter SstT	NA	NA	NA	NA	NA
AVR90816.1|366806_369359_+	cation-transporting P-type ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	28.9	1.2e-60
AVR90817.1|369364_370813_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90818.1|370904_372086_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90819.1|372129_373554_-	DUF1116 domain-containing protein	NA	NA	NA	NA	NA
AVR90820.1|373540_375100_-	acyl-CoA synthetase FdrA	NA	NA	NA	NA	NA
AVR90821.1|375077_375944_-	DUF2877 domain-containing protein	NA	NA	NA	NA	NA
AVR90822.1|376074_377745_+	PucR family transcriptional regulator	NA	NA	NA	NA	NA
AVR90823.1|377778_378684_+	bacteriochlorophyll 4-vinyl reductase	NA	NA	NA	NA	NA
AVR90824.1|378851_379577_+	SAM-dependent DNA methyltransferase	NA	A0A2H4PQP4	Staphylococcus_phage	41.0	8.6e-36
AVR90825.1|379942_380401_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90826.1|380397_382785_+	restriction endonuclease	NA	NA	NA	NA	NA
AVR90827.1|382803_385716_-	DNA modification methyltransferase	NA	A0A1P8BMM5	Lactococcus_phage	24.8	6.6e-18
AVR90828.1|385965_386190_-	XRE family transcriptional regulator	NA	A0A2K5B263	Erysipelothrix_phage	68.8	1.9e-18
AVR90829.1|386190_387837_-	DUF2326 domain-containing protein	NA	NA	NA	NA	NA
AVR90830.1|387826_388051_-	hypothetical protein	NA	NA	NA	NA	NA
AVR93192.1|388034_389129_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90831.1|389677_390262_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90832.1|390363_390561_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90833.1|390565_390880_+	rRNA biogenesis protein rrp5	NA	A0A2K5B2A7	Erysipelothrix_phage	45.3	7.6e-13
AVR90834.1|390879_392022_+	DUF2800 domain-containing protein	NA	Q6DMW2	Streptococcus_phage	58.2	1.3e-123
AVR90835.1|392023_392572_+	DUF2815 domain-containing protein	NA	A0A2K5B2A9	Erysipelothrix_phage	83.1	1.4e-83
AVR90836.1|392631_394569_+	hypothetical protein	NA	A0A2K5B2B0	Erysipelothrix_phage	66.9	6.3e-259
AVR90837.1|394753_395422_+	transcriptional regulator	NA	A0A2K5B268	Erysipelothrix_phage	64.5	1.2e-76
AVR90838.1|395426_395639_+	hypothetical protein	NA	A0A2K5B269	Erysipelothrix_phage	56.2	4.9e-16
AVR90839.1|395631_395976_+	DUF4406 domain-containing protein	NA	A0A2K5B270	Erysipelothrix_phage	53.3	4.8e-29
AVR90840.1|395968_398215_+	DNA primase	NA	A0A1B0RXC5	Streptococcus_phage	48.6	1.4e-204
AVR90841.1|398340_398553_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90842.1|398542_398752_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90843.1|398748_399036_+	VRR-NUC domain-containing protein	NA	A0A1B0RXC4	Streptococcus_phage	65.6	7.1e-26
AVR90844.1|399032_400388_+	DEAD/DEAH box helicase	NA	A0A2K5B273	Erysipelothrix_phage	71.7	1.1e-164
AVR90845.1|400350_400725_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90846.1|400736_401153_+	DUF1492 domain-containing protein	NA	A0A2K5B275	Erysipelothrix_phage	37.2	2.8e-15
AVR93193.1|401313_401673_+	HNH endonuclease	NA	A0A2K5B276	Erysipelothrix_phage	56.6	1.1e-31
AVR93195.1|401804_402383_+|terminase	terminase	terminase	A0A2K5B277	Erysipelothrix_phage	51.8	2.4e-52
AVR93194.1|402387_403170_+	S-adenosylmethionine synthetase	NA	NA	NA	NA	NA
AVR90847.1|403170_404421_+	DNA modification methylase	NA	A0A2I4R670	Erysipelothrix_phage	60.4	4.1e-142
AVR90848.1|404508_404898_+	DUF4314 domain-containing protein	NA	E4ZFL7	Streptococcus_phage	71.0	3.1e-16
AVR90849.1|404900_405095_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90850.1|405069_405267_+	DUF5049 domain-containing protein	NA	NA	NA	NA	NA
AVR90851.1|405256_405481_+	hypothetical protein	NA	A0A2K5B284	Erysipelothrix_phage	45.9	1.1e-13
AVR90852.1|405534_407133_+|terminase	terminase large subunit	terminase	A0A2K5B285	Erysipelothrix_phage	84.3	3.6e-268
AVR90853.1|407282_407702_+	DUF2992 domain-containing protein	NA	NA	NA	NA	NA
AVR90854.1|407752_409120_+|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	75.1	2.3e-178
AVR90855.1|409010_409763_+|protease	Clp protease	protease	M1PLE5	Streptococcus_phage	56.6	5.6e-62
AVR90856.1|409766_410984_+|capsid	phage major capsid protein	capsid	A0A2I4R671	Erysipelothrix_phage	48.5	7.3e-104
AVR90857.1|410994_411306_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2K5B290	Erysipelothrix_phage	74.0	2.2e-36
AVR90858.1|411302_411641_+|head,tail	head-tail adaptor protein	head,tail	A0A2K5B291	Erysipelothrix_phage	54.7	1.7e-23
AVR90859.1|411633_412065_+	hypothetical protein	NA	A0A2K5B292	Erysipelothrix_phage	59.4	7.6e-40
AVR93196.1|412091_412400_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90860.1|412401_412992_+|tail	phage tail protein	tail	A0A2K5B294	Erysipelothrix_phage	72.2	8.2e-77
AVR90861.1|413001_413385_+	hypothetical protein	NA	A0A2K5B295	Erysipelothrix_phage	64.2	4.1e-37
AVR90862.1|413638_414067_+	N-acetyltransferase	NA	NA	NA	NA	NA
AVR90863.1|414155_416717_+|tail	phage tail protein	tail	A0A2K5B297	Erysipelothrix_phage	74.5	1.1e-82
AVR90864.1|416732_417425_+|tail	phage tail protein	tail	A0A1L2BYA2	Clostridium_phage	29.0	4.9e-20
AVR90865.1|417421_421495_+	hypothetical protein	NA	A0A1B1P770	Bacillus_phage	43.0	1.4e-87
AVR90866.1|421668_422088_+	DUF1617 domain-containing protein	NA	A0A1I9KKA6	Lactobacillus_phage	25.6	1.1e-06
AVR90867.1|422138_422552_+|holin	holin	holin	A0A2K5B2A2	Erysipelothrix_phage	57.0	1.5e-37
AVR90868.1|422541_423462_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1D8ETE4	Propionibacterium_phage	41.7	3.4e-29
AVR90869.1|423582_423987_+	hypothetical protein	NA	NA	NA	NA	NA
AVR93197.1|424259_425975_+	recombinase family protein	NA	Q6DMS6	Streptococcus_phage	40.4	9.4e-73
AVR90870.1|425934_427509_+	recombinase family protein	NA	Q6DMS5	Streptococcus_phage	54.7	3.2e-152
AVR90871.1|427633_429676_+	DUF4357 domain-containing protein	NA	NA	NA	NA	NA
AVR90872.1|429696_429981_+	hypothetical protein	NA	NA	NA	NA	NA
432175:432193	attL	AAGAACAACAAAAAATAGG	NA	NA	NA	NA
AVR90873.1|432418_432910_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90874.1|432945_433875_-|integrase	site-specific integrase	integrase	A8ATM2	Listeria_phage	47.1	4.3e-80
AVR90875.1|433958_435140_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
434677:434695	attR	CCTATTTTTTGTTGTTCTT	NA	NA	NA	NA
AVR90876.1|435237_438381_+	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
AVR93198.1|438592_439666_+	chloride ion channel protein	NA	NA	NA	NA	NA
AVR90877.1|439690_440347_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90878.1|440398_441466_-	choloylglycine hydrolase	NA	M1H9I8	Acanthocystis_turfacea_Chlorella_virus	27.8	1.7e-19
AVR90879.1|441684_443304_+	SulP family inorganic anion transporter	NA	NA	NA	NA	NA
AVR90880.1|443375_444068_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90881.1|444260_444713_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AVR90882.1|444728_445244_+	N-acetyltransferase	NA	NA	NA	NA	NA
AVR90883.1|445838_447335_+	putative allantoin permease	NA	NA	NA	NA	NA
AVR90884.1|447335_448700_+	allantoinase AllB	NA	NA	NA	NA	NA
AVR90885.1|448881_450105_+	allantoate deiminase	NA	NA	NA	NA	NA
AVR90886.1|450126_450912_+	(S)-ureidoglycine aminohydrolase	NA	NA	NA	NA	NA
AVR90887.1|451029_452655_-	PucR family transcriptional regulator	NA	NA	NA	NA	NA
AVR90888.1|452826_454035_+	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
AVR90889.1|454132_455392_+	MFS transporter	NA	NA	NA	NA	NA
AVR90890.1|455437_455698_-	metal-sensitive transcriptional regulator	NA	NA	NA	NA	NA
AVR90891.1|455865_456180_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
AVR90892.1|456180_457830_+	CoA-disulfide reductase	NA	NA	NA	NA	NA
AVR90893.1|457822_458122_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
AVR90894.1|458293_459460_+	RND transporter	NA	NA	NA	NA	NA
AVR90895.1|459452_460127_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	2.2e-33
AVR90896.1|460123_461332_+	permease	NA	NA	NA	NA	NA
AVR90897.1|462474_463923_+	amidase	NA	NA	NA	NA	NA
AVR90898.1|463988_464516_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
AVR90899.1|464636_467450_+	PRD domain-containing protein	NA	NA	NA	NA	NA
AVR90900.1|467521_467923_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
AVR90901.1|467942_468437_+	PTS mannose/fructose/sorbose transporter subunit IIB	NA	NA	NA	NA	NA
AVR90902.1|468460_469210_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
AVR93199.1|469218_470061_+	PTS fructose transporter subunit IID	NA	NA	NA	NA	NA
AVR90903.1|470072_471176_+	SelA-like pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AVR90904.1|471179_471923_+	oxo-acid lyase	NA	NA	NA	NA	NA
AVR90905.1|472074_474183_+	mannonate oxidoreductase	NA	F2Y0V3	Organic_Lake_phycodnavirus	21.9	3.5e-13
AVR90906.1|474300_475716_+	alkaline phosphatase	NA	NA	NA	NA	NA
AVR90907.1|475827_476799_+	amidinotransferase	NA	NA	NA	NA	NA
AVR90908.1|477200_478160_-|transposase	IS30-like element IS1062 family transposase	transposase	H7BW61	unidentified_phage	25.7	4.1e-09
AVR90909.1|478902_479544_-	MFS transporter	NA	NA	NA	NA	NA
AVR90910.1|479583_481113_-	copper oxidase	NA	NA	NA	NA	NA
AVR90911.1|481393_482075_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	85.4	1.2e-111
AVR90912.1|482731_484411_+	D-lactate dehydrogenase	NA	NA	NA	NA	NA
AVR90913.1|484513_485886_-|transposase	IS3-like element ISLla3 family transposase	transposase	A0A1B1P773	Bacillus_phage	44.2	3.7e-56
AVR90914.1|486268_487618_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	51.4	5.8e-118
AVR90915.1|487755_488379_-	cysteine hydrolase	NA	NA	NA	NA	NA
AVR90916.1|488455_488644_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90917.1|488643_489219_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AVR90918.1|489572_489833_+	DUF3102 domain-containing protein	NA	J7KDG2	Streptococcus_phage	49.4	1.4e-12
AVR90919.1|489982_490507_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	38.6	2.8e-20
AVR90920.1|490507_490861_+	hypothetical protein	NA	NA	NA	NA	NA
AVR93200.1|490976_491318_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90921.1|491436_492378_+	lysophospholipase	NA	NA	NA	NA	NA
AVR90922.1|492422_493682_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
AVR90923.1|493983_494124_-	DNA-binding protein	NA	NA	NA	NA	NA
AVR90924.1|494224_494461_+	XRE family transcriptional regulator	NA	A0A097PBE6	Streptococcus_pyogenes_phage	50.7	1.6e-12
AVR90925.1|494879_496994_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	38.7	3.4e-117
AVR90926.1|498510_499470_-|transposase	IS30 family transposase IS6770	transposase	NA	NA	NA	NA
AVR93201.1|499630_499897_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90927.1|501566_502729_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	49.1	3.1e-75
AVR90928.1|502836_503691_+	chromosome partitioning protein ParA	NA	A0A1X9I765	Streptococcus_phage	97.9	5.0e-152
AVR90929.1|503761_503977_+	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	94.2	3.0e-29
AVR90930.1|503993_504266_+	antitoxin	NA	A0A1X9I6E5	Streptococcus_phage	96.7	5.4e-07
AVR90931.1|504267_504576_+	zeta toxin	NA	NA	NA	NA	NA
AVR93202.1|504655_505084_-	hypothetical protein	NA	W6LMU7	Streptococcus_phage	35.7	5.8e-16
AVR90932.1|505128_505629_-	HAD family hydrolase	NA	NA	NA	NA	NA
AVR90933.1|505633_506401_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
AVR90934.1|506602_506827_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90935.1|506888_507314_+	galactose-6-phosphate isomerase subunit LacA	NA	NA	NA	NA	NA
AVR90936.1|507330_507846_+	galactose-6-phosphate isomerase subunit LacB	NA	NA	NA	NA	NA
AVR90937.1|507856_508789_+	tagatose-6-phosphate kinase	NA	NA	NA	NA	NA
AVR90938.1|508791_509772_+	tagatose-bisphosphate aldolase	NA	NA	NA	NA	NA
AVR90939.1|509799_510117_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
AVR90940.1|510116_511823_+	PTS lactose transporter subunit IIBC	NA	NA	NA	NA	NA
AVR90941.1|511969_513376_+	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
AVR90942.1|513398_513671_+	DUF3884 domain-containing protein	NA	NA	NA	NA	NA
AVR90943.1|513691_514591_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
AVR90944.1|515027_515636_+	zeta-toxin	NA	NA	NA	NA	NA
AVR90945.1|515583_515862_-	recombinase family protein	NA	NA	NA	NA	NA
AVR90946.1|515849_516170_-	recombinase family protein	NA	A0A219Y912	Aeromonas_phage	45.1	5.5e-19
AVR90947.1|519787_520762_+	choloylglycine hydrolase	NA	M1H001	Paramecium_bursaria_Chlorella_virus	31.6	2.1e-24
AVR90948.1|521206_521512_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90949.1|521505_522033_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90950.1|522627_522870_+	hypothetical protein	NA	NA	NA	NA	NA
AVR93203.1|523276_524119_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90951.1|524256_524853_+	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	38.1	2.2e-21
AVR90952.1|524869_525157_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90953.1|525150_525375_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90954.1|525395_525644_+	DNA helicase UvrB	NA	NA	NA	NA	NA
AVR90955.1|525985_526258_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90956.1|526290_526740_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90957.1|526891_527851_+|transposase	IS30 family transposase IS6770	transposase	NA	NA	NA	NA
>prophage 26
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	545717	546191	2928142		Clostridioides_phage(100.0%)	1	NA	NA
AVR90969.1|545717_546191_-	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	37.3	4.1e-10
>prophage 27
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	554406	603943	2928142	transposase	Staphylococcus_phage(25.0%)	47	NA	NA
AVR90980.1|554406_555366_-|transposase	IS30-like element IS1062 family transposase	transposase	H7BW61	unidentified_phage	25.7	4.1e-09
AVR90981.1|555660_556731_+	ammonium transporter	NA	NA	NA	NA	NA
AVR93207.1|558166_558295_-	PTS lactose transporter subunit IIC	NA	NA	NA	NA	NA
AVR90982.1|559034_559346_-|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	65.6	1.6e-23
AVR90983.1|559451_559727_-	hypothetical protein	NA	A0A0N9S8A3	Staphylococcus_phage	40.9	1.1e-10
AVR90984.1|560235_561402_-	ROK family transcriptional regulator	NA	NA	NA	NA	NA
AVR93208.1|561767_563834_+	family 31 glucosidase	NA	NA	NA	NA	NA
AVR90985.1|563833_564619_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
AVR93209.1|564611_565424_+	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA	NA
AVR90986.1|565448_565931_+	PTS mannose/fructose/sorbose transporter subunit IIB	NA	NA	NA	NA	NA
AVR90987.1|565942_566350_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
AVR90988.1|566454_567762_+	xylose isomerase	NA	NA	NA	NA	NA
AVR90989.1|567823_569314_+	xylulokinase	NA	NA	NA	NA	NA
AVR90990.1|570318_571278_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
AVR90991.1|571604_572804_+	MFS transporter	NA	NA	NA	NA	NA
AVR90992.1|572879_573440_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AVR90993.1|573583_574198_+	N-acetyltransferase	NA	NA	NA	NA	NA
AVR90994.1|574438_574822_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AVR90995.1|577243_578646_-|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	42.8	1.4e-34
AVR90996.1|578822_579287_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
AVR90997.1|579279_579576_+	PTS ascorbate transporter subunit IIB	NA	NA	NA	NA	NA
AVR90998.1|580160_581003_-	MATE family efflux transporter	NA	NA	NA	NA	NA
AVR90999.1|581348_582017_+	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
AVR91000.1|582119_582386_+	ACT domain-containing protein	NA	NA	NA	NA	NA
AVR91001.1|582400_583744_+	PFL family protein	NA	NA	NA	NA	NA
AVR91002.1|584645_585095_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91003.1|586475_587435_-|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
AVR91004.1|587692_588412_+	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	32.7	1.2e-18
AVR91005.1|588413_589256_+	metal ABC transporter permease	NA	NA	NA	NA	NA
AVR91006.1|589252_590203_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVR91007.1|590217_590451_+	iron-dependent repressor	NA	NA	NA	NA	NA
AVR91008.1|590779_591364_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AVR91009.1|591494_592163_+	cobalt transporter	NA	NA	NA	NA	NA
AVR91010.1|592164_593589_+	ABC transporter ATP-binding protein	NA	A0A1V0SGN0	Hokovirus	26.4	4.5e-20
AVR91011.1|593606_594176_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91012.1|594285_596040_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.1	4.4e-25
AVR91013.1|596023_597766_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.4	5.0e-29
AVR91014.1|598288_598549_+	30S ribosomal protein S14	NA	NA	NA	NA	NA
AVR91015.1|598563_598743_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
AVR91016.1|598773_599151_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91017.1|599171_599321_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
AVR91018.1|599847_600294_+	polysaccharide deacetylase	NA	NA	NA	NA	NA
AVR91019.1|600318_601407_+	polysaccharide deacetylase	NA	NA	NA	NA	NA
AVR91020.1|601586_601757_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVR91021.1|601735_602125_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91022.1|602169_602598_+	NusG domain II-containing protein	NA	NA	NA	NA	NA
AVR91023.1|602983_603943_+|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
>prophage 28
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	612239	617149	2928142	tRNA	Staphylococcus_phage(50.0%)	4	NA	NA
AVR91034.1|612239_613079_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	48.5	4.0e-69
AVR91035.1|613101_613584_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
AVR91036.1|613749_615195_+	cardiolipin synthase	NA	NA	NA	NA	NA
AVR91037.1|615892_617149_+|tRNA	Tyrosine--tRNA ligase 1	tRNA	A0A1L2CUL7	Pectobacterium_phage	40.3	1.7e-79
>prophage 29
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	624375	624882	2928142		Bacillus_virus(100.0%)	1	NA	NA
AVR91043.1|624375_624882_-	phosphatidylglycerophosphatase A	NA	G3MBC5	Bacillus_virus	55.1	3.6e-41
>prophage 30
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	628927	629887	2928142		Catovirus(100.0%)	1	NA	NA
AVR91050.1|628927_629887_+	epimerase	NA	A0A1V0SAI6	Catovirus	30.2	1.2e-32
>prophage 31
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	655245	656199	2928142		Bacillus_virus(100.0%)	1	NA	NA
AVR91076.1|655245_656199_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	7.1e-22
>prophage 32
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	664012	664354	2928142		Streptococcus_phage(100.0%)	1	NA	NA
AVR91083.1|664012_664354_+	YlbF family regulator	NA	A0A1X9I5Y8	Streptococcus_phage	34.9	2.5e-09
>prophage 33
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	672677	673415	2928142		Staphylococcus_phage(100.0%)	1	NA	NA
AVR91091.1|672677_673415_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	2.0e-27
>prophage 34
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	685306	686881	2928142		Streptococcus_phage(100.0%)	1	NA	NA
AVR91104.1|685306_686881_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	26.1	2.7e-34
>prophage 35
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	698301	703200	2928142	protease	Agrobacterium_phage(50.0%)	4	NA	NA
AVR91115.1|698301_700554_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	39.9	8.7e-127
AVR91116.1|700844_701036_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91117.1|701206_701473_+	phosphocarrier protein HPr	NA	NA	NA	NA	NA
AVR91118.1|701472_703200_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	33.9	8.7e-18
>prophage 36
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	715368	719783	2928142		Bacillus_phage(50.0%)	2	NA	NA
AVR91126.1|715368_717627_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	39.7	2.1e-125
AVR91127.1|717752_719783_+	NAD-dependent DNA ligase LigA	NA	A0A0A8J9A9	Ralstonia_phage	35.7	3.7e-108
>prophage 37
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	723587	731674	2928142		Catovirus(25.0%)	7	NA	NA
AVR91132.1|723587_724676_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.6	6.7e-16
AVR91133.1|724875_726249_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	51.1	5.8e-134
AVR91134.1|726517_726835_+	thioredoxin	NA	NA	NA	NA	NA
AVR93214.1|726877_727723_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AVR91135.1|728121_729141_+	putrescine carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	27.8	1.2e-14
AVR91136.1|729207_730584_+	APC family permease	NA	NA	NA	NA	NA
AVR91137.1|730576_731674_+	agmatine deiminase	NA	M1HPC5	Acanthocystis_turfacea_Chlorella_virus	47.9	1.3e-96
>prophage 38
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	734970	736304	2928142		Bacillus_phage(50.0%)	2	NA	NA
AVR93215.1|734970_735651_+	nicotinamide riboside transporter PnuC	NA	A0A218KBU3	Bacillus_phage	27.9	1.1e-19
AVR91141.1|735659_736304_+	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	48.2	9.0e-53
>prophage 39
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	752084	755529	2928142		Streptococcus_phage(50.0%)	2	NA	NA
AVR91158.1|752084_753989_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	32.8	1.3e-91
AVR91159.1|754791_755529_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	44.2	1.1e-35
>prophage 40
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	760092	788352	2928142	integrase,protease	Streptococcus_phage(86.96%)	32	750661:750681	786121:786141
750661:750681	attL	AGTCAAAAAAACATTAGAAAA	NA	NA	NA	NA
AVR91162.1|760092_762912_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	55.6	1.7e-305
AVR91163.1|763083_763890_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91164.1|764055_764943_+	RNase adaptor protein RapZ	NA	A0A0R8VB27	Thermobifida_phage	32.2	5.3e-11
AVR91165.1|764942_765938_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	64.2	1.9e-118
AVR91166.1|765971_766907_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	37.8	2.1e-50
AVR91167.1|767140_768064_+	PEP phosphonomutase	NA	NA	NA	NA	NA
AVR91168.1|768177_768696_+	DsbA family protein	NA	NA	NA	NA	NA
AVR91169.1|768740_769334_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	54.7	4.4e-54
AVR91170.1|769529_770048_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91171.1|770068_770473_-	DUF1622 domain-containing protein	NA	NA	NA	NA	NA
AVR91172.1|770829_772047_-|integrase	site-specific integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
AVR91173.1|772128_772332_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
AVR91174.1|772315_772567_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91175.1|772792_773023_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
AVR91176.1|773019_773442_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
AVR93216.1|773670_773742_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91177.1|773946_774300_+	XRE family transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
AVR91178.1|774359_774545_-	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	67.9	3.9e-17
AVR91179.1|774645_776565_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.1	0.0e+00
AVR91180.1|776580_776667_-	tetracycline resistance protein	NA	NA	NA	NA	NA
AVR91181.1|776941_777874_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
AVR91182.1|777870_778872_-	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	99.7	1.4e-190
AVR91183.1|778868_781046_-	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
AVR91184.1|781048_783496_-	ATP/GTP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
AVR91185.1|783479_783986_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
AVR91186.1|783960_784458_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
AVR91187.1|784574_784796_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
AVR91188.1|784838_786044_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
AVR91189.1|786066_786219_-	conjugal transfer protein	NA	NA	NA	NA	NA
786121:786141	attR	TTTTCTAATGTTTTTTTGACT	NA	NA	NA	NA
AVR91190.1|786221_787607_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
AVR91191.1|787635_788022_-	DUF961 domain-containing protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
AVR91192.1|788037_788352_-	DUF961 domain-containing protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
>prophage 41
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	792532	800740	2928142		Staphylococcus_phage(50.0%)	6	NA	NA
AVR91197.1|792532_794320_+	glycerophosphodiester phosphodiesterase	NA	A0A249Y1D7	Staphylococcus_phage	25.3	4.2e-07
AVR91198.1|794345_794753_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AVR91199.1|794986_795187_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	81.8	2.1e-24
AVR93217.1|795948_797262_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
AVR91200.1|797462_799340_+	acetyltransferase	NA	W6MVL2	Pseudomonas_phage	31.4	4.2e-34
AVR91201.1|799555_800740_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	71.2	1.7e-150
>prophage 42
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	804202	822521	2928142	tRNA	Staphylococcus_phage(37.5%)	18	NA	NA
AVR91205.1|804202_805918_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.0	3.5e-11
AVR91206.1|805917_807687_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.6	4.2e-52
AVR91207.1|807649_807892_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91208.1|807888_808098_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91209.1|808096_808702_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AVR91210.1|808839_809919_+	ABC transporter permease	NA	NA	NA	NA	NA
AVR91211.1|809923_810592_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.1	1.9e-29
AVR91212.1|810649_811213_-	SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	45.5	4.3e-35
AVR91213.1|811212_812181_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	58.8	3.0e-44
AVR91214.1|812196_812847_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AVR91215.1|813014_814040_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91216.1|814039_814699_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
AVR91217.1|815015_817229_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	32.5	3.4e-14
AVR91218.1|817632_820047_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	72.7	0.0e+00
AVR91219.1|820101_820392_-	DUF3955 domain-containing protein	NA	NA	NA	NA	NA
AVR91220.1|820422_820866_-	DUF2798 domain-containing protein	NA	NA	NA	NA	NA
AVR91221.1|821041_821872_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVR91222.1|821885_822521_-	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.1	2.1e-30
>prophage 43
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	829069	830329	2928142		Lactobacillus_phage(50.0%)	2	NA	NA
AVR91232.1|829069_829525_-	N-acetyltransferase	NA	E9LUK4	Lactobacillus_phage	54.7	7.5e-38
AVR91233.1|829699_830329_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.6	2.4e-34
>prophage 44
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	848067	849678	2928142		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
AVR91254.1|848067_849678_+	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.4	2.4e-62
>prophage 45
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	852891	853269	2928142		Lactobacillus_phage(100.0%)	1	NA	NA
AVR91259.1|852891_853269_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A291I9M9	Lactobacillus_phage	36.9	6.7e-08
>prophage 46
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	869687	870881	2928142		Planktothrix_phage(100.0%)	1	NA	NA
AVR91274.1|869687_870881_-	osmoprotectant	NA	G9BWD6	Planktothrix_phage	32.2	4.4e-21
>prophage 47
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	875066	894076	2928142	transposase	Acanthocystis_turfacea_Chlorella_virus(25.0%)	13	NA	NA
AVR91279.1|875066_877712_+	calcium-translocating P-type ATPase, PMCA-type	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	27.4	4.4e-69
AVR91280.1|878074_879034_+|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
AVR91281.1|879113_881120_+	potassium transporter Kup	NA	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	33.9	5.5e-64
AVR91282.1|881189_881888_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVR91283.1|882052_884158_+	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	27.6	1.6e-61
AVR91284.1|884281_885706_+	M protein trans-acting positive regulator	NA	NA	NA	NA	NA
AVR91285.1|885774_886686_+	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	31.9	1.5e-08
AVR91286.1|886873_889522_+	DNA polymerase I	NA	F8WQ35	Bacillus_phage	34.6	4.9e-52
AVR91287.1|889621_890464_+	formamidopyrimidine-DNA glycosylase	NA	A0A127AWE5	Bacillus_phage	30.5	2.8e-22
AVR91288.1|890460_891060_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
AVR91289.1|891239_891722_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
AVR91290.1|891737_893147_+	helicase DnaB	NA	D2IZY0	Enterococcus_phage	44.7	1.8e-05
AVR91291.1|893143_894076_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	36.6	6.1e-26
>prophage 48
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	904207	908968	2928142	tRNA	Planktothrix_phage(50.0%)	4	NA	NA
AVR91298.1|904207_904930_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	6.8e-33
AVR91299.1|904922_906386_-	ABC transporter permease	NA	NA	NA	NA	NA
AVR91300.1|906575_907664_+	oxidoreductase	NA	NA	NA	NA	NA
AVR91301.1|907822_908968_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	43.5	4.5e-87
>prophage 49
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	923278	931198	2928142	transposase	Planktothrix_phage(16.67%)	12	NA	NA
AVR91315.1|923278_924337_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.1	2.0e-17
AVR91316.1|924336_925293_+	ABC transporter ATP-binding protein	NA	A0A1J0FA64	Only_Syngen_Nebraska_virus	23.9	3.2e-06
AVR91317.1|925333_926404_+|transposase	transposase	transposase	A0A288TXV8	Enterococcus_phage	48.4	3.8e-88
AVR91318.1|926802_927324_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	3.0e-14
AVR91319.1|927437_927638_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
AVR91320.1|927698_928058_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
AVR91321.1|928104_928455_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91322.1|928377_928641_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91323.1|928552_928912_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
AVR91324.1|929039_929474_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AVR91325.1|929491_930007_+	GrpB family protein	NA	A0A2K5B2B6	Erysipelothrix_phage	47.6	4.2e-37
AVR91326.1|930022_931198_-	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	48.0	3.0e-86
>prophage 50
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	934920	935595	2928142		Bacillus_phage(100.0%)	1	NA	NA
AVR91331.1|934920_935595_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	30.1	8.3e-25
>prophage 51
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	939265	941275	2928142	tRNA	Klosneuvirus(100.0%)	1	NA	NA
AVR91335.1|939265_941275_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	39.2	1.2e-100
>prophage 52
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	947844	959232	2928142		Bacillus_phage(60.0%)	11	NA	NA
AVR91343.1|947844_948948_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.7	3.7e-22
AVR91344.1|949133_949556_+	methylglyoxal synthase	NA	NA	NA	NA	NA
AVR91345.1|949829_950369_+	folate family ECF transporter S component	NA	NA	NA	NA	NA
AVR91346.1|950420_952187_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.7	1.5e-52
AVR91347.1|952176_953904_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.6	4.1e-44
AVR91348.1|954011_954797_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91349.1|955058_956267_+	peptidase M23	NA	F8WPX7	Bacillus_phage	55.9	3.9e-17
AVR91350.1|956363_956927_+	N-acetyltransferase	NA	NA	NA	NA	NA
AVR91351.1|956972_957497_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91352.1|957548_958418_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
AVR91353.1|958551_959232_+	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	46.0	1.2e-47
>prophage 53
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	964005	971323	2928142		Synechococcus_phage(33.33%)	6	NA	NA
AVR91360.1|964005_964674_-	beta-phosphoglucomutase	NA	A0A1D8KNV9	Synechococcus_phage	24.6	8.6e-06
AVR91361.1|964666_966961_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
AVR91362.1|967240_969409_+	PTS glucose/maltose transporter subunit IIBCA	NA	A0A2I7SAJ6	Vibrio_phage	36.0	2.1e-05
AVR91363.1|969474_969609_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91364.1|969623_970448_+	maltose 6'-phosphate phosphatase	NA	NA	NA	NA	NA
AVR91365.1|970507_971323_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	29.2	2.7e-22
>prophage 54
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	982989	985191	2928142		Enterococcus_phage(50.0%)	2	NA	NA
AVR91384.1|982989_983835_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	36.7	9.7e-39
AVR91385.1|983844_985191_+	exodeoxyribonuclease VII large subunit	NA	A0A160DEV2	Gordonia_phage	33.2	4.5e-30
>prophage 55
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	991283	992685	2928142	transposase	Macacine_betaherpesvirus(100.0%)	1	NA	NA
AVR91393.1|991283_992685_+|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	42.8	1.4e-34
>prophage 56
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1009900	1014256	2928142	tRNA	Klosneuvirus(50.0%)	2	NA	NA
AVR91413.1|1009900_1012681_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	27.8	1.1e-91
AVR91414.1|1012732_1014256_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	33.7	3.6e-76
>prophage 57
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1017524	1018826	2928142		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
AVR91419.1|1017524_1018826_+	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.6	4.7e-40
>prophage 58
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1030502	1033148	2928142		Stenotrophomonas_phage(100.0%)	1	NA	NA
AVR91433.1|1030502_1033148_-	pyruvate, phosphate dikinase	NA	A0A2D2W2B1	Stenotrophomonas_phage	39.9	2.5e-85
>prophage 59
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1039992	1042230	2928142		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
AVR91440.1|1039992_1042230_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	31.0	1.4e-121
>prophage 60
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1046581	1046983	2928142		Anguillid_herpesvirus(100.0%)	1	NA	NA
AVR93226.1|1046581_1046983_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.1	3.0e-22
>prophage 61
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1051832	1058331	2928142		Moraxella_phage(50.0%)	4	NA	NA
AVR91446.1|1051832_1053239_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	28.8	7.8e-41
AVR93227.1|1053447_1054644_+	multidrug resistance protein	NA	NA	NA	NA	NA
AVR91447.1|1054698_1054884_-	DUF2929 domain-containing protein	NA	NA	NA	NA	NA
AVR91448.1|1055001_1058331_+	DNA polymerase III subunit alpha	NA	A0A291AWR1	Streptomyces_phage	32.0	1.0e-144
>prophage 62
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1062671	1066477	2928142		Bacillus_phage(66.67%)	3	NA	NA
AVR91453.1|1062671_1064093_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	NA	A0A1D7RI04	Synechococcus_phage	32.1	2.9e-35
AVR91454.1|1064250_1064937_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	31.2	1.1e-27
AVR91455.1|1064947_1066477_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	27.5	1.1e-21
>prophage 63
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1073985	1074795	2928142		Indivirus(100.0%)	1	NA	NA
AVR91459.1|1073985_1074795_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	30.2	2.6e-12
>prophage 64
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1091464	1092454	2928142		Tupanvirus(100.0%)	1	NA	NA
AVR91475.1|1091464_1092454_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	36.5	4.0e-52
>prophage 65
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1099059	1100376	2928142		Streptococcus_phage(100.0%)	1	NA	NA
AVR91482.1|1099059_1100376_+	excinuclease ABC subunit A	NA	Q6DMX4	Streptococcus_phage	41.1	1.9e-89
>prophage 66
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1121205	1122801	2928142		Bacillus_phage(100.0%)	1	NA	NA
AVR91501.1|1121205_1122801_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.0	1.6e-21
>prophage 67
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1134079	1139653	2928142	tRNA	Bacillus_phage(50.0%)	3	NA	NA
AVR91513.1|1134079_1137874_+	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	23.0	5.0e-18
AVR91514.1|1137943_1138288_+	transcriptional regulator	NA	NA	NA	NA	NA
AVR91515.1|1138606_1139653_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	33.9	4.6e-30
>prophage 68
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1144579	1147751	2928142		Planktothrix_phage(50.0%)	3	NA	NA
AVR91520.1|1144579_1145311_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.5	1.7e-31
AVR91521.1|1145581_1146403_+	glutamate racemase	NA	NA	NA	NA	NA
AVR91522.1|1146395_1147751_+	ribonuclease PH	NA	A0A2H4UUV7	Bodo_saltans_virus	30.3	1.9e-12
>prophage 69
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1159209	1171598	2928142		Staphylococcus_phage(25.0%)	13	NA	NA
AVR91538.1|1159209_1160034_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.6	4.5e-73
AVR91539.1|1160084_1160807_-	gamma-glutamyl-gamma-aminobutyrate hydrolase	NA	NA	NA	NA	NA
AVR91540.1|1160948_1161323_-	lactoylglutathione lyase	NA	NA	NA	NA	NA
AVR91541.1|1161471_1161918_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AVR91542.1|1161981_1162794_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
AVR91543.1|1162812_1164183_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	33.3	1.8e-26
AVR91544.1|1164179_1165031_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
AVR91545.1|1165326_1165764_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
AVR91546.1|1165831_1166458_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
AVR91547.1|1166765_1168376_+	CTP synthetase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.7	2.6e-141
AVR91548.1|1168396_1168546_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91549.1|1168602_1170939_-	penicillin-binding protein	NA	NA	NA	NA	NA
AVR91550.1|1170980_1171598_-	Holliday junction resolvase RecU	NA	R9TMF8	Paenibacillus_phage	37.4	9.9e-25
>prophage 70
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1176130	1176847	2928142		Bacillus_phage(100.0%)	1	NA	NA
AVR91555.1|1176130_1176847_+	DNA replication protein DnaD	NA	A0A0N7AE27	Bacillus_phage	42.7	1.1e-14
>prophage 71
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1188191	1189148	2928142		Streptococcus_phage(100.0%)	1	NA	NA
AVR91565.1|1188191_1189148_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	27.9	1.4e-17
>prophage 72
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1205800	1213218	2928142		Bacillus_phage(50.0%)	7	NA	NA
AVR91584.1|1205800_1206661_+	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	24.6	1.6e-12
AVR91585.1|1206814_1207480_+	MIP family channel protein	NA	NA	NA	NA	NA
AVR91586.1|1207653_1208358_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	41.2	1.7e-44
AVR91587.1|1208364_1210194_+	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	37.0	1.1e-34
AVR91588.1|1210190_1211501_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91589.1|1211500_1212355_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91590.1|1212411_1213218_+	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	34.0	2.2e-32
>prophage 73
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1220624	1221950	2928142		Dickeya_phage(100.0%)	1	NA	NA
AVR91600.1|1220624_1221950_-	malate permease	NA	A0A140XAH4	Dickeya_phage	51.5	1.8e-18
>prophage 74
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1234034	1235075	2928142		Bacillus_virus(100.0%)	1	NA	NA
AVR91612.1|1234034_1235075_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.4	3.5e-30
>prophage 75
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1241494	1245905	2928142		Lactobacillus_phage(66.67%)	4	NA	NA
AVR91618.1|1241494_1242103_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	51.5	2.6e-54
AVR91619.1|1242121_1243378_+	NADPH-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	53.5	4.9e-63
AVR91620.1|1243789_1245280_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91621.1|1245221_1245905_+	hypothetical protein	NA	A0A2I7S7V5	Vibrio_phage	38.9	4.7e-07
>prophage 76
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1261292	1267317	2928142		Pandoravirus(50.0%)	6	NA	NA
AVR91634.1|1261292_1262726_+	aryl-phospho-beta-D-glucosidase	NA	A0A0B5JD41	Pandoravirus	31.6	8.2e-54
AVR91635.1|1262750_1263800_+	oxidoreductase	NA	NA	NA	NA	NA
AVR91636.1|1264273_1264732_+	DUF441 domain-containing protein	NA	NA	NA	NA	NA
AVR91637.1|1264770_1265112_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
AVR91638.1|1265185_1265449_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91639.1|1265604_1267317_-	DUF814 domain-containing protein	NA	A0A1J0F9J4	Only_Syngen_Nebraska_virus	46.2	2.1e-08
>prophage 77
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1271118	1281755	2928142		Streptococcus_phage(40.0%)	11	NA	NA
AVR91644.1|1271118_1271886_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.6	1.4e-12
AVR91645.1|1271917_1272379_-	threonine/serine exporter	NA	NA	NA	NA	NA
AVR91646.1|1272390_1273167_-	threonine/serine exporter	NA	NA	NA	NA	NA
AVR91647.1|1273398_1273605_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91648.1|1273622_1274402_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
AVR91649.1|1274616_1275336_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	37.0	1.6e-34
AVR91650.1|1275335_1276805_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	28.6	1.2e-20
AVR91651.1|1276843_1277395_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91652.1|1277409_1278111_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91653.1|1278216_1280325_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	54.1	6.1e-199
AVR91654.1|1280582_1281755_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	50.6	7.8e-103
>prophage 78
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1290055	1310525	2928142	holin,tRNA,tail	Enterococcus_phage(40.0%)	24	NA	NA
AVR91663.1|1290055_1292452_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.1	1.7e-19
AVR91664.1|1292476_1292827_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
AVR91665.1|1292909_1293140_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91666.1|1293199_1293673_-	toxin	NA	A0A097BY56	Enterococcus_phage	71.2	1.1e-60
AVR91667.1|1293719_1294202_-	XRE family transcriptional regulator	NA	R9QTP6	Staphylococcus_phage	48.6	1.2e-20
AVR91668.1|1294371_1294554_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91669.1|1294584_1295355_+	DNA replication protein	NA	A0A0K0MX39	Streptococcus_phage	57.0	2.5e-33
AVR91670.1|1295373_1296216_+	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	30.3	1.4e-29
AVR91671.1|1296218_1296311_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91672.1|1296303_1296675_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91673.1|1296694_1297102_+	transcriptional regulator	NA	NA	NA	NA	NA
AVR91674.1|1297347_1297740_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91675.1|1297752_1298265_+|tail	phage major tail protein, TP901-1 family	tail	W6LP72	Streptococcus_phage	49.4	8.8e-35
AVR91676.1|1298299_1298659_+	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	32.2	7.6e-09
AVR91677.1|1298676_1299045_+	hypothetical protein	NA	A0A1P8BLR3	Lactococcus_phage	33.3	1.3e-08
AVR91678.1|1299034_1301968_+	hypothetical protein	NA	W8EBC4	Geobacillus_phage	41.2	6.9e-15
AVR91679.1|1301969_1302896_+|tail	phage tail family protein	tail	C9E2K5	Enterococcus_phage	78.6	6.9e-147
AVR91680.1|1302908_1304366_+	hypothetical protein	NA	C9E2K6	Enterococcus_phage	47.8	3.3e-175
AVR91681.1|1304398_1306234_+	hypothetical protein	NA	A0A097BYA8	Enterococcus_phage	71.7	4.1e-143
AVR91682.1|1306239_1306635_+|holin	holin	holin	F0PIJ6	Enterococcus_phage	48.9	2.8e-33
AVR91683.1|1306780_1307878_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A139ZVY1	Enterococcus_phage	44.3	2.6e-76
AVR91684.1|1308032_1308953_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
AVR91685.1|1308972_1309929_+	riboflavin biosynthesis protein RibF	NA	NA	NA	NA	NA
AVR91686.1|1309928_1310525_+	N-acetyltransferase	NA	A0A1P8CWJ6	Bacillus_phage	37.1	1.5e-22
>prophage 79
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1316460	1319121	2928142		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
AVR91695.1|1316460_1319121_+	magnesium-translocating P-type ATPase	NA	M1HXH2	Paramecium_bursaria_Chlorella_virus	24.0	8.3e-44
>prophage 80
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1322435	1326699	2928142		Chrysochromulina_ericina_virus(33.33%)	5	NA	NA
AVR91699.1|1322435_1324265_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	48.3	4.6e-134
AVR91700.1|1324379_1324502_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91701.1|1324556_1325726_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.0	2.7e-23
AVR91702.1|1325697_1325943_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91703.1|1325964_1326699_+	serine/threonine protein phosphatase	NA	A7KV25	Bacillus_phage	30.9	2.1e-13
>prophage 81
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1334851	1335553	2928142		Planktothrix_phage(100.0%)	1	NA	NA
AVR91712.1|1334851_1335553_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.0	1.3e-36
>prophage 82
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1353524	1357973	2928142		Mycobacterium_phage(100.0%)	1	NA	NA
AVR91726.1|1353524_1357973_+	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	25.1	9.7e-29
>prophage 83
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1369384	1376968	2928142	tail	Streptococcus_phage(33.33%)	8	NA	NA
AVR91738.1|1369384_1369717_+	DUF4176 domain-containing protein	NA	A0A1X9I6T6	Streptococcus_phage	53.8	4.5e-24
AVR91739.1|1369809_1370787_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91740.1|1370805_1371609_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91741.1|1371793_1372225_+	cupin	NA	NA	NA	NA	NA
AVR91742.1|1372393_1373308_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.4	8.5e-89
AVR91743.1|1373350_1373812_-|tail	phage tail protein	tail	NA	NA	NA	NA
AVR91744.1|1374008_1374509_-	peptidase M4	NA	NA	NA	NA	NA
AVR91745.1|1374628_1376968_-	sulfate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	5.8e-33
>prophage 84
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1387703	1396171	2928142		Only_Syngen_Nebraska_virus(33.33%)	5	NA	NA
AVR91755.1|1387703_1390316_+	magnesium-translocating P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	25.4	1.1e-51
AVR91756.1|1390914_1392030_+	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	E3SJ83	Synechococcus_phage	28.4	8.1e-09
AVR91757.1|1392032_1393010_+	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
AVR91758.1|1393152_1394757_+	dihydrolipoamide acetyltransferase	NA	NA	NA	NA	NA
AVR91759.1|1394764_1396171_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.8	5.6e-47
>prophage 85
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1407757	1410063	2928142		Lactococcus_phage(50.0%)	3	NA	NA
AVR91769.1|1407757_1407958_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	72.7	3.3e-22
AVR91770.1|1408255_1409377_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91771.1|1409712_1410063_-	XRE family transcriptional regulator	NA	Q5YAA4	Bacillus_phage	56.9	1.8e-15
>prophage 86
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1417073	1422642	2928142	tRNA	Hokovirus(50.0%)	3	NA	NA
AVR91779.1|1417073_1418423_+	ATP-dependent helicase	NA	A0A1V0SGU7	Hokovirus	31.4	4.8e-40
AVR91780.1|1418970_1419654_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AVR91781.1|1419999_1422642_+|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	34.1	1.1e-67
>prophage 87
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1441500	1451146	2928142		Staphylococcus_phage(50.0%)	9	NA	NA
AVR91800.1|1441500_1443603_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	36.5	2.0e-117
AVR91801.1|1443599_1443692_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91802.1|1443871_1444315_+	cell division protein ZapA	NA	NA	NA	NA	NA
AVR91803.1|1444334_1444883_+	CvpA family protein	NA	NA	NA	NA	NA
AVR91804.1|1444993_1447360_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	52.2	2.0e-25
AVR91805.1|1447457_1447772_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	40.4	2.3e-17
AVR91806.1|1447936_1449733_+	excinuclease ABC subunit C	NA	NA	NA	NA	NA
AVR91807.1|1449884_1450142_+	DUF3884 domain-containing protein	NA	NA	NA	NA	NA
AVR91808.1|1450246_1451146_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.6	1.6e-23
>prophage 88
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1455766	1459722	2928142		Streptococcus_phage(66.67%)	3	NA	NA
AVR93243.1|1455766_1457215_+	ABC-F type ribosomal protection protein	NA	Q6DMX7	Streptococcus_phage	37.7	1.9e-74
AVR91813.1|1457255_1458542_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	58.0	1.8e-23
AVR91814.1|1458663_1459722_-	endonuclease	NA	A0A1S5SAB0	Streptococcus_phage	59.1	3.1e-103
>prophage 89
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1491801	1497555	2928142		Paramecium_bursaria_Chlorella_virus(33.33%)	3	NA	NA
AVR91845.1|1491801_1494138_+	ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	25.1	6.0e-38
AVR91846.1|1494453_1496340_+	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	31.6	4.2e-50
AVR91847.1|1496448_1497555_+	RNA polymerase sigma factor SigA	NA	F4YCU2	Synechococcus_phage	39.6	1.2e-39
>prophage 90
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1507045	1512712	2928142		uncultured_Mediterranean_phage(50.0%)	6	NA	NA
AVR91857.1|1507045_1507795_-	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	44.2	3.8e-26
AVR91858.1|1507976_1509068_+	DUF871 domain-containing protein	NA	NA	NA	NA	NA
AVR91859.1|1509262_1510192_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AVR91860.1|1510360_1511251_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.9	1.1e-32
AVR91861.1|1511315_1512110_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	31.9	2.2e-08
AVR91862.1|1512106_1512712_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.5	2.7e-14
>prophage 91
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1517349	1518786	2928142		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
AVR91868.1|1517349_1518786_+	ATP-dependent DNA helicase RecQ	NA	F2NZ48	Diadromus_pulchellus_ascovirus	36.6	2.5e-58
>prophage 92
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1523464	1530287	2928142		Bacillus_phage(25.0%)	9	NA	NA
AVR91873.1|1523464_1523740_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	70.8	1.2e-25
AVR91874.1|1523854_1523965_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91875.1|1524046_1525087_+	hypothetical protein	NA	NA	NA	NA	NA
AVR93246.1|1525114_1526353_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AVR91876.1|1526362_1526902_+	hypothetical protein	NA	G3MAV7	Bacillus_virus	32.2	3.0e-17
AVR91877.1|1526939_1527824_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	38.7	3.5e-55
AVR91878.1|1527947_1528298_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
AVR91879.1|1528290_1529070_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
AVR91880.1|1529066_1530287_+	CCA-adding enzyme	NA	H7BUW3	unidentified_phage	51.7	1.0e-44
>prophage 93
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1534722	1535889	2928142		Pandoravirus(100.0%)	1	NA	NA
AVR91886.1|1534722_1535889_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	36.1	3.9e-38
>prophage 94
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1541083	1541932	2928142		Staphylococcus_phage(100.0%)	1	NA	NA
AVR91892.1|1541083_1541932_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	36.2	1.9e-13
>prophage 95
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1545412	1550621	2928142	tRNA	Tupanvirus(25.0%)	5	NA	NA
AVR91897.1|1545412_1547308_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.4	3.2e-50
AVR91898.1|1547325_1548273_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	66.9	2.9e-124
AVR91899.1|1548290_1548785_+	trimethoprim-resistant dihydrofolate reductase DfrE	NA	A0A1B2IBQ4	Erwinia_phage	37.2	1.6e-20
AVR91900.1|1548808_1549978_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
AVR91901.1|1549991_1550621_-	LexA repressor	NA	A0A0N9RTK0	Paenibacillus_phage	32.3	1.6e-06
>prophage 96
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1554667	1556689	2928142		Brevibacillus_phage(50.0%)	2	NA	NA
AVR91905.1|1554667_1555528_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0K2CP65	Brevibacillus_phage	45.8	9.0e-24
AVR91906.1|1555756_1556689_+	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	63.6	1.3e-105
>prophage 97
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1561462	1570031	2928142		Bacillus_phage(50.0%)	7	NA	NA
AVR91912.1|1561462_1563211_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.3	4.2e-52
AVR91913.1|1563203_1564982_+	multidrug ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.3	2.8e-59
AVR91914.1|1564982_1565087_+	methionine ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AVR91915.1|1565070_1565496_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
AVR91916.1|1565635_1566646_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91917.1|1566948_1568385_+	catalase	NA	A0A2K9L0T1	Tupanvirus	37.3	1.9e-90
AVR91918.1|1568597_1570031_-	deoxyribodipyrimidine photo-lyase	NA	A0A1V0SGL1	Hokovirus	34.3	7.1e-66
>prophage 98
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1586610	1593679	2928142		Bacillus_virus(66.67%)	3	NA	NA
AVR91931.1|1586610_1588857_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.3	2.1e-165
AVR91932.1|1589146_1591609_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	30.7	2.9e-99
AVR91933.1|1591621_1593679_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.3	4.5e-114
>prophage 99
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1610357	1611125	2928142		Bacillus_virus(100.0%)	1	NA	NA
AVR91953.1|1610357_1611125_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.6	2.2e-13
>prophage 100
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1616016	1625236	2928142	tRNA,protease	Erwinia_phage(25.0%)	8	NA	NA
AVR91959.1|1616016_1617420_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.5	1.7e-43
AVR91960.1|1617434_1617983_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
AVR91961.1|1618011_1618911_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.2	1.4e-35
AVR91962.1|1619122_1620430_-|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
AVR91963.1|1620537_1622616_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	35.8	3.8e-100
AVR91964.1|1622800_1623454_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AVR93249.1|1623544_1624408_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
AVR91965.1|1624468_1625236_-	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	39.8	1.3e-26
>prophage 101
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1644763	1657761	2928142		Staphylococcus_phage(33.33%)	16	NA	NA
AVR91985.1|1644763_1645444_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.6	3.2e-32
AVR91986.1|1645636_1646368_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91987.1|1646369_1647224_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.3	2.0e-15
AVR91988.1|1647220_1647589_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AVR91989.1|1647737_1648181_-	hypothetical protein	NA	NA	NA	NA	NA
AVR91990.1|1648301_1648856_-	signal peptidase I	NA	NA	NA	NA	NA
AVR91991.1|1648874_1650308_-	PDZ domain-containing protein	NA	A0A0R6PIZ1	Moraxella_phage	26.8	4.1e-21
AVR91992.1|1650404_1650623_-	YozE family protein	NA	NA	NA	NA	NA
AVR91993.1|1650628_1651144_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
AVR91994.1|1651160_1651805_-	DUF2140 domain-containing protein	NA	NA	NA	NA	NA
AVR93250.1|1651806_1652634_-	lipase	NA	NA	NA	NA	NA
AVR91995.1|1652809_1653652_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	42.4	3.1e-21
AVR91996.1|1653774_1654437_+	hemolysin III	NA	NA	NA	NA	NA
AVR91997.1|1654630_1654828_+	hypothetical protein	NA	NA	NA	NA	NA
AVR91998.1|1654933_1655446_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.2	3.5e-31
AVR91999.1|1655448_1657761_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.6	1.1e-68
>prophage 102
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1662655	1663210	2928142		Lactobacillus_phage(100.0%)	1	NA	NA
AVR92006.1|1662655_1663210_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	29.1	2.0e-08
>prophage 103
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1666629	1669112	2928142		Bacillus_phage(100.0%)	2	NA	NA
AVR92011.1|1666629_1667340_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	37.8	6.7e-41
AVR92012.1|1667336_1669112_+	PAS domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	33.8	2.8e-27
>prophage 104
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1685074	1689669	2928142		Halovirus(33.33%)	4	NA	NA
AVR92026.1|1685074_1686154_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	37.6	4.2e-63
AVR92027.1|1686156_1687440_-	dihydroorotase	NA	NA	NA	NA	NA
AVR92028.1|1687448_1688375_-	aspartate carbamoyltransferase	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	33.9	1.3e-28
AVR92029.1|1688388_1689669_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	37.6	4.1e-65
>prophage 105
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1694595	1705057	2928142	tRNA	Bacillus_phage(33.33%)	13	NA	NA
AVR92035.1|1694595_1694802_+	cold shock domain-containing protein	NA	Q9AZD3	Lactococcus_phage	56.9	4.0e-15
AVR92036.1|1694906_1695368_-	pore-forming protein EbsA	NA	NA	NA	NA	NA
AVR92037.1|1695468_1695876_+	ribonuclease HI	NA	NA	NA	NA	NA
AVR92038.1|1696005_1696500_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AVR93252.1|1696517_1697279_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	31.4	3.3e-22
AVR92039.1|1697434_1699219_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.2	1.0e-45
AVR92040.1|1699218_1700970_-	multidrug ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.2	1.0e-53
AVR92041.1|1701167_1701386_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92042.1|1701580_1702474_-	endonuclease	NA	A0A2H4UU70	Bodo_saltans_virus	32.2	1.9e-24
AVR92043.1|1702484_1702952_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AVR92044.1|1702951_1703614_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92045.1|1703610_1703790_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92046.1|1703794_1705057_-|tRNA	Tyrosine--tRNA ligase 2	tRNA	A0A1L2CUL7	Pectobacterium_phage	42.0	2.6e-80
>prophage 106
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1713459	1714356	2928142		Bacillus_phage(100.0%)	1	NA	NA
AVR92054.1|1713459_1714356_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	51.4	2.1e-76
>prophage 107
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1721709	1727825	2928142		Bacillus_virus(50.0%)	7	NA	NA
AVR92063.1|1721709_1722468_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.6	5.5e-17
AVR92064.1|1722478_1723288_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.0	2.7e-14
AVR92065.1|1723304_1724189_-	phosphate ABC transporter permease PtsA	NA	NA	NA	NA	NA
AVR92066.1|1724188_1725109_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AVR92067.1|1725231_1726086_-	phosphate ABC transporter substrate-binding protein	NA	E3SLK5	Synechococcus_phage	22.0	9.0e-08
AVR92068.1|1726261_1727146_-	ABC transporter permease	NA	NA	NA	NA	NA
AVR92069.1|1727138_1727825_-	cell division ATP-binding protein FtsE	NA	G3M9Y6	Bacillus_virus	25.5	1.4e-16
>prophage 108
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1733267	1737302	2928142		Streptococcus_phage(50.0%)	6	NA	NA
AVR92073.1|1733267_1734584_-	DNA/RNA helicase	NA	A0A1X9I5S6	Streptococcus_phage	42.1	2.1e-80
AVR92074.1|1734683_1735019_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
AVR92075.1|1735139_1735427_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92076.1|1735568_1736231_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	50.0	6.2e-49
AVR92077.1|1736220_1736454_+	DUF2829 domain-containing protein	NA	A8AT88	Listeria_phage	35.2	1.9e-08
AVR92078.1|1736537_1737302_+	3-oxoacyl-ACP reductase	NA	A0A0K0KVL6	Prochlorococcus_phage	25.0	2.3e-07
>prophage 109
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1740486	1750668	2928142		Synechococcus_phage(42.86%)	10	NA	NA
AVR92083.1|1740486_1742028_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	52.6	2.7e-79
AVR92084.1|1742024_1742597_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.1	9.2e-25
AVR92085.1|1742593_1743625_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	44.4	1.1e-55
AVR92086.1|1743626_1745066_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.3	4.7e-49
AVR92087.1|1745041_1747261_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.9	2.8e-146
AVR92088.1|1747257_1747932_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
AVR92089.1|1747932_1748184_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AVR92090.1|1748197_1748911_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3ELR0	Synechococcus_phage	43.0	4.3e-48
AVR92091.1|1749062_1750187_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AVR92092.1|1750179_1750668_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.0	3.8e-19
>prophage 110
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1775041	1825717	2928142	integrase,transposase,protease	Streptococcus_phage(55.56%)	46	1781338:1781353	1803200:1803215
AVR92114.1|1775041_1777102_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	43.2	2.6e-146
AVR92115.1|1777143_1778553_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	30.7	3.6e-38
AVR92116.1|1778913_1779768_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AVR92117.1|1780159_1780990_+	PhnP protein	NA	NA	NA	NA	NA
AVR92118.1|1781137_1781992_-|protease	serine protease	protease	NA	NA	NA	NA
1781338:1781353	attL	AAAATAGTAATGGATT	NA	NA	NA	NA
AVR92119.1|1782040_1783573_-	peptidase M4 family protein	NA	NA	NA	NA	NA
AVR92120.1|1783807_1784878_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
AVR92121.1|1784807_1785335_-	HD domain-containing protein	NA	NA	NA	NA	NA
AVR92122.1|1785552_1786458_+	polysaccharide deacetylase	NA	NA	NA	NA	NA
AVR92123.1|1787658_1787841_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92124.1|1787961_1788063_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92125.1|1788204_1789383_-|integrase	site-specific integrase	integrase	S6C485	Thermus_phage	30.2	2.8e-28
AVR92126.1|1790366_1792202_-	beta-galactosidase	NA	NA	NA	NA	NA
AVR92127.1|1792373_1793636_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
AVR92128.1|1793773_1793998_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92129.1|1794252_1795545_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	40.4	3.9e-31
AVR92130.1|1795818_1796079_-	hypothetical protein	NA	NA	NA	NA	NA
AVR93256.1|1796683_1797845_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	2.0e-79
AVR93257.1|1797917_1798124_+	hypothetical protein	NA	U5P429	Shigella_phage	53.3	2.6e-06
AVR92131.1|1798393_1798789_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
AVR92132.1|1798801_1799650_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AVR92133.1|1799664_1800492_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	M4QNT1	Ostreococcus_lucimarinus_virus	38.0	5.4e-50
AVR92134.1|1800503_1801349_-	DUF2520 domain-containing protein	NA	NA	NA	NA	NA
AVR92135.1|1803096_1804416_-	sensor histidine kinase	NA	NA	NA	NA	NA
1803200:1803215	attR	AATCCATTACTATTTT	NA	NA	NA	NA
AVR92136.1|1804412_1805066_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	33.2	4.0e-24
AVR92137.1|1805127_1805268_-	RNA helicase	NA	NA	NA	NA	NA
AVR92138.1|1806620_1807997_-	ABC transporter permease	NA	NA	NA	NA	NA
AVR92139.1|1807996_1808653_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.1	1.3e-22
AVR92140.1|1808662_1809940_-	ABC transporter permease	NA	NA	NA	NA	NA
AVR92141.1|1810126_1810612_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
AVR92142.1|1810767_1811178_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92143.1|1811422_1811710_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92144.1|1811710_1811938_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
AVR92145.1|1812008_1813199_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
AVR92146.1|1813303_1814215_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	41.1	1.3e-57
AVR92147.1|1814233_1815238_-	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	66.3	1.4e-121
AVR92148.1|1815234_1817358_-	FUSC family protein	NA	A0A1S5SF30	Streptococcus_phage	58.7	2.4e-174
AVR92149.1|1817362_1819810_-	ATP/GTP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.3	0.0e+00
AVR93258.1|1819796_1820186_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	66.7	2.5e-42
AVR92150.1|1820249_1820978_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92151.1|1820984_1821812_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92152.1|1821885_1822389_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	61.2	3.1e-56
AVR92153.1|1822401_1822623_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	87.7	4.5e-28
AVR92154.1|1823019_1824270_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	62.1	6.1e-114
AVR92155.1|1824401_1824536_-	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
AVR92156.1|1824532_1825717_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	62.1	1.0e-142
>prophage 111
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1829912	1832054	2928142		Streptococcus_phage(100.0%)	4	NA	NA
AVR92158.1|1829912_1830929_-	cell division protein FtsK	NA	A0A1S5SFB5	Streptococcus_phage	58.6	5.2e-103
AVR92159.1|1830998_1831352_-	damage-inducible protein J	NA	NA	NA	NA	NA
AVR92160.1|1831352_1831727_-	DUF961 domain-containing protein	NA	A0A1S5SF96	Streptococcus_phage	67.9	1.9e-34
AVR92161.1|1831739_1832054_-	DUF961 domain-containing protein	NA	A0A1S5SF38	Streptococcus_phage	53.8	4.6e-26
>prophage 112
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1840513	1843025	2928142		Streptococcus_phage(50.0%)	2	NA	NA
AVR92169.1|1840513_1841122_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	42.7	3.0e-34
AVR92170.1|1841222_1843025_+	glycerophosphodiester phosphodiesterase	NA	I6XE30	Staphylococcus_phage	23.3	3.5e-09
>prophage 113
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1851066	1852320	2928142	protease	Bacillus_virus(100.0%)	1	NA	NA
AVR92183.1|1851066_1852320_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	1.5e-144
>prophage 114
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1862114	1862819	2928142		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
AVR93260.1|1862114_1862819_-	aquaporin family protein	NA	M1H9L8	Acanthocystis_turfacea_Chlorella_virus	35.1	2.6e-29
>prophage 115
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1871353	1874059	2928142		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
AVR92199.1|1871353_1874059_-	ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	29.2	3.3e-72
>prophage 116
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1891478	1892777	2928142		Streptococcus_phage(100.0%)	1	NA	NA
AVR92218.1|1891478_1892777_-	enolase	NA	W6LP63	Streptococcus_phage	81.1	1.2e-192
>prophage 117
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1897530	1906727	2928142	tRNA	Orpheovirus(50.0%)	9	NA	NA
AVR92223.1|1897530_1898409_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	22.8	5.2e-11
AVR92224.1|1898551_1899121_-	TIGR01440 family protein	NA	NA	NA	NA	NA
AVR92225.1|1899117_1899636_-	ECF transporter S component	NA	NA	NA	NA	NA
AVR92226.1|1899607_1900423_-	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
AVR92227.1|1900597_1902367_-|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L424	Tupanvirus	30.3	1.3e-13
AVR92228.1|1902384_1903686_-|tRNA	histidine--tRNA ligase	tRNA	A0A2I2L577	Orpheovirus	26.6	8.8e-23
AVR92229.1|1903682_1903931_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92230.1|1904043_1904490_-|tRNA	D-aminoacyl-tRNA deacylase	tRNA	NA	NA	NA	NA
AVR92231.1|1904513_1906727_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	38.0	1.3e-10
>prophage 118
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1909906	1911184	2928142		Bacillus_phage(100.0%)	1	NA	NA
AVR92236.1|1909906_1911184_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	49.9	1.8e-105
>prophage 119
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1923533	1927656	2928142		Planktothrix_phage(50.0%)	3	NA	NA
AVR92253.1|1923533_1924283_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.5	2.4e-33
AVR92254.1|1924400_1925102_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AVR92255.1|1925232_1927656_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.0	2.2e-83
>prophage 120
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1931296	1934793	2928142		Bacillus_phage(50.0%)	2	NA	NA
AVR92260.1|1931296_1933063_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	25.8	1.6e-22
AVR92261.1|1933059_1934793_-	thiol reductant ABC exporter subunit CydD	NA	A0A2H4UU96	Bodo_saltans_virus	24.3	1.1e-12
>prophage 121
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1947361	1952670	2928142		Tupanvirus(66.67%)	5	NA	NA
AVR93262.1|1947361_1948336_-	ribose-phosphate pyrophosphokinase 1	NA	A0A2K9L2G2	Tupanvirus	31.9	9.8e-35
AVR92274.1|1948548_1949298_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	2.6e-11
AVR92275.1|1949294_1950164_+	metal ABC transporter permease	NA	NA	NA	NA	NA
AVR92276.1|1950150_1951077_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVR92277.1|1951131_1952670_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	24.5	7.7e-34
>prophage 122
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1955799	1956870	2928142		Planktothrix_phage(100.0%)	1	NA	NA
AVR92282.1|1955799_1956870_-	methionine import ATP-binding protein MetN 1	NA	G9BWD6	Planktothrix_phage	35.1	4.0e-29
>prophage 123
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1963225	1968014	2928142		Paramecium_bursaria_Chlorella_virus(50.0%)	3	NA	NA
AVR92289.1|1963225_1965034_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	37.8	1.2e-97
AVR92290.1|1965477_1966311_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
AVR92291.1|1966307_1968014_-	heme ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	2.0e-19
>prophage 124
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1976472	1982479	2928142	tRNA	Klosneuvirus(66.67%)	6	NA	NA
AVR92296.1|1976472_1977813_-	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	25.0	2.0e-06
AVR92297.1|1977855_1978239_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AVR92298.1|1978441_1979683_-	GTPase HflX	NA	NA	NA	NA	NA
AVR92299.1|1979686_1980616_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AVR92300.1|1980616_1981363_-	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	41.2	2.8e-13
AVR93264.1|1981519_1982479_-	epimerase	NA	A0A1V0SKV4	Klosneuvirus	36.5	5.3e-49
>prophage 125
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	1986779	1994205	2928142		uncultured_marine_virus(25.0%)	6	NA	NA
AVR92304.1|1986779_1987748_-	glycosyltransferase family 2 protein	NA	A0A0F7L2F7	uncultured_marine_virus	29.1	1.2e-05
AVR92305.1|1987749_1988805_-	dTDP-glucose 4,6-dehydratase	NA	A0A140G5S6	Enterobacteria_phage	27.1	3.7e-11
AVR92306.1|1988816_1989518_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AVR92307.1|1990086_1992198_-	hypothetical protein	NA	D6PSS2	Lactobacillus_phage	27.0	1.1e-17
AVR92308.1|1992513_1993356_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AVR92309.1|1993371_1994205_-	ammonia monooxygenase	NA	F2Y1U7	Organic_Lake_phycodnavirus	33.2	2.4e-13
>prophage 126
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2004447	2011708	2928142		Escherichia_phage(40.0%)	9	NA	NA
AVR92315.1|2004447_2005665_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.0	1.5e-08
AVR92316.1|2005677_2006472_-	ABC transporter permease	NA	NA	NA	NA	NA
AVR92317.1|2006718_2007060_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92318.1|2007133_2007484_-	DUF2304 domain-containing protein	NA	NA	NA	NA	NA
AVR92319.1|2007483_2008209_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AVR92320.1|2008267_2009110_-	dTDP-4-dehydrorhamnose reductase	NA	A0A1D8EQE2	Escherichia_phage	33.2	4.2e-26
AVR92321.1|2009203_2010232_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	41.9	1.9e-68
AVR92322.1|2010256_2010829_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	50.3	2.4e-41
AVR92323.1|2010841_2011708_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	63.9	6.1e-105
>prophage 127
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2017935	2019337	2928142	transposase	Macacine_betaherpesvirus(100.0%)	1	NA	NA
AVR92331.1|2017935_2019337_+|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	42.8	1.4e-34
>prophage 128
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2022377	2022758	2928142		Microbacterium_phage(100.0%)	1	NA	NA
AVR92335.1|2022377_2022758_+	PH domain-containing protein	NA	A6N235	Microbacterium_phage	33.0	2.5e-10
>prophage 129
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2027072	2028077	2928142		Clostridium_phage(100.0%)	1	NA	NA
AVR92342.1|2027072_2028077_-	nucleoid-associated protein	NA	A0A090D855	Clostridium_phage	22.3	8.6e-10
>prophage 130
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2043426	2046985	2928142		Bacillus_phage(100.0%)	2	NA	NA
AVR92355.1|2043426_2045154_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.6	1.2e-35
AVR92356.1|2045206_2046985_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.8	1.1e-52
>prophage 131
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2075056	2087946	2928142		Ostreococcus_lucimarinus_virus(20.0%)	9	NA	NA
AVR92376.1|2075056_2076973_-	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	24.0	7.4e-26
AVR92377.1|2076983_2078018_-	5-dehydro-2-deoxygluconokinase	NA	NA	NA	NA	NA
AVR92378.1|2078176_2079193_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AVR92379.1|2079379_2081215_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	25.3	5.2e-21
AVR92380.1|2081461_2082682_+	acetyltransferase	NA	NA	NA	NA	NA
AVR92381.1|2082705_2083185_+	nucleoside 2-deoxyribosyltransferase	NA	A0A1W6JK28	Lactococcus_phage	56.9	4.1e-42
AVR92382.1|2083219_2085826_-	chaperone protein ClpB	NA	A0A2I7SAX5	Vibrio_phage	34.4	4.4e-130
AVR92383.1|2086095_2086467_-	DoxX family protein	NA	NA	NA	NA	NA
AVR92384.1|2086650_2087946_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	24.7	1.1e-17
>prophage 132
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2092439	2093081	2928142		Brevibacillus_phage(100.0%)	1	NA	NA
AVR92389.1|2092439_2093081_-	N-acetylmuramoyl-L-alanine amidase	NA	S5M633	Brevibacillus_phage	44.4	1.7e-27
>prophage 133
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2096203	2102194	2928142	tRNA	Acanthamoeba_polyphaga_moumouvirus(50.0%)	4	NA	NA
AVR92395.1|2096203_2097556_-|tRNA	asparagine--tRNA ligase	tRNA	L7RCX2	Acanthamoeba_polyphaga_moumouvirus	32.0	2.9e-61
AVR92396.1|2097572_2098772_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AVR92397.1|2098810_2099329_-	peptidase	NA	NA	NA	NA	NA
AVR92398.1|2099404_2102194_-	DNA polymerase III subunit epsilon	NA	A0A127AW80	Bacillus_phage	25.8	2.8e-50
>prophage 134
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2105638	2109994	2928142		Clostridium_phage(100.0%)	1	NA	NA
AVR92401.1|2105638_2109994_-	PolC-type DNA polymerase III	NA	A0A0A8WJ41	Clostridium_phage	40.3	3.0e-22
>prophage 135
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2114201	2125416	2928142	tRNA,protease	Tupanvirus(25.0%)	11	NA	NA
AVR92408.1|2114201_2115920_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	23.5	2.6e-06
AVR92409.1|2115991_2117260_-|protease	protease eep	protease	NA	NA	NA	NA
AVR92410.1|2117543_2117639_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92411.1|2117675_2118455_+	glucose-1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.7	6.0e-19
AVR92412.1|2118539_2119142_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92413.1|2119130_2119235_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92414.1|2119527_2120133_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92415.1|2120216_2120717_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92416.1|2120803_2122351_-	ATP-dependent helicase	NA	Q331U3	Clostridium_botulinum_C_phage	27.2	1.8e-06
AVR92417.1|2122350_2124096_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
AVR92418.1|2124243_2125416_-	ImmA/IrrE family metallo-endopeptidase	NA	B6SBZ6	Clostridium_virus	40.2	3.1e-67
>prophage 136
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2128871	2132629	2928142		Mycobacterium_phage(33.33%)	4	NA	NA
AVR92421.1|2128871_2129339_-	SUF system NifU family Fe-S cluster assembly protein	NA	V5R992	Mycobacterium_phage	36.6	2.7e-14
AVR92422.1|2129325_2130561_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	48.1	1.3e-113
AVR92423.1|2130557_2131844_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
AVR92424.1|2131858_2132629_-	Fe-S cluster assembly ATPase SufC	NA	A0A1M7XV31	Cedratvirus	26.3	4.7e-08
>prophage 137
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2147916	2149523	2928142		Rhizobium_phage(50.0%)	2	NA	NA
AVR92441.1|2147916_2148891_-	phosphate starvation-inducible protein PhoH	NA	L7TP00	Rhizobium_phage	48.3	5.9e-48
AVR92442.1|2149073_2149523_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	37.4	1.2e-16
>prophage 138
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2155015	2157629	2928142		Streptococcus_phage(100.0%)	2	NA	NA
AVR92449.1|2155015_2155798_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	37.1	5.5e-36
AVR92450.1|2155904_2157629_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	61.1	2.8e-202
>prophage 139
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2160854	2161832	2928142		Bacillus_virus(100.0%)	1	NA	NA
AVR92454.1|2160854_2161832_-	GMP reductase	NA	G3MBI2	Bacillus_virus	79.8	5.1e-148
>prophage 140
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2164913	2165540	2928142		Streptococcus_phage(100.0%)	1	NA	NA
AVR92457.1|2164913_2165540_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	50.5	4.3e-52
>prophage 141
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2178251	2183465	2928142		Clostridium_botulinum_C_phage(33.33%)	5	NA	NA
AVR92473.1|2178251_2180591_-	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	37.5	6.6e-37
AVR92474.1|2180550_2181054_-	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	55.8	1.5e-34
AVR92475.1|2181176_2181821_-	competence protein ComEA	NA	NA	NA	NA	NA
AVR92476.1|2181916_2182969_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
AVR92477.1|2182973_2183465_-	phosphopantetheine adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	35.6	4.8e-22
>prophage 142
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2191236	2202509	2928142	tRNA	Streptococcus_phage(28.57%)	10	NA	NA
AVR92484.1|2191236_2193006_-	DNA helicase RecQ	NA	M1PGQ0	Moumouvirus	39.8	4.5e-78
AVR92485.1|2193323_2195159_-	translational GTPase TypA	NA	A0A1S5SF82	Streptococcus_phage	36.1	1.6e-17
AVR92486.1|2195379_2196162_-	inositol monophosphatase family protein	NA	NA	NA	NA	NA
AVR92487.1|2196162_2196441_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92488.1|2196490_2197756_-	voltage-gated chloride channel protein	NA	A0A1X9I5Z9	Streptococcus_phage	34.4	4.2e-46
AVR92489.1|2197966_2198215_-	hypothetical protein	NA	A0A1P8BLF6	Lactococcus_phage	52.0	4.6e-13
AVR92490.1|2198392_2198716_+	XRE family transcriptional regulator	NA	D7RWL5	Brochothrix_phage	61.2	3.6e-26
AVR92491.1|2198796_2199312_-	hydrolase	NA	NA	NA	NA	NA
AVR92492.1|2199452_2201144_-|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	33.3	6.9e-76
AVR92493.1|2201462_2202509_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.1	9.8e-57
>prophage 143
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2213497	2218304	2928142		Flavobacterium_phage(33.33%)	8	NA	NA
AVR92505.1|2213497_2214313_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.4	2.1e-22
AVR92506.1|2214660_2215479_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVR92507.1|2215493_2216180_-	ABC transporter permease	NA	NA	NA	NA	NA
AVR92508.1|2216172_2217210_-	methionine import ATP-binding protein MetN 2	NA	G3M9Y6	Bacillus_virus	35.2	7.8e-30
AVR92509.1|2217203_2217404_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92510.1|2217370_2217463_-	hypothetical protein	NA	NA	NA	NA	NA
AVR93271.1|2217624_2217939_-	glycine cleavage system protein H	NA	NA	NA	NA	NA
AVR92511.1|2217944_2218304_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	56.9	3.5e-30
>prophage 144
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2231750	2238370	2928142		Aeromonas_phage(25.0%)	6	NA	NA
AVR92524.1|2231750_2232989_-	serine hydroxymethyltransferase	NA	A0A219YB23	Aeromonas_phage	54.9	1.3e-103
AVR92525.1|2233064_2234087_-	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	38.8	3.4e-54
AVR92526.1|2234130_2234964_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AVR92527.1|2234956_2236030_-	peptide chain release factor 1	NA	NA	NA	NA	NA
AVR92528.1|2236041_2236626_-	thymidine kinase	NA	E0YIP8	Lactococcus_phage	52.6	9.4e-49
AVR92529.1|2236852_2238370_-	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	31.3	2.4e-56
>prophage 145
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2250206	2257434	2928142		environmental_halophage(33.33%)	6	NA	NA
AVR92537.1|2250206_2251355_-	aminotransferase class V-fold PLP-dependent enzyme	NA	Q2XUY6	environmental_halophage	29.0	6.0e-31
AVR92538.1|2251368_2251950_-	molybdenum cofactor cytidylyltransferase	NA	NA	NA	NA	NA
AVR92539.1|2251963_2254537_-	selenium-dependent xanthine dehydrogenase	NA	A0A0P0I429	Acinetobacter_phage	25.4	1.2e-50
AVR92540.1|2254657_2255665_-	xanthine dehydrogenase accessory factor	NA	NA	NA	NA	NA
AVR92541.1|2255661_2256021_-	molybdenum transporter	NA	NA	NA	NA	NA
AVR92542.1|2256114_2257434_-	purine permease	NA	Q9KX94	Enterobacteria_phage	28.8	3.4e-22
>prophage 146
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2276957	2283592	2928142		Bacillus_phage(66.67%)	5	NA	NA
AVR92559.1|2276957_2278826_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	33.0	8.7e-64
AVR92560.1|2278822_2280550_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.3	3.5e-51
AVR92561.1|2280570_2281248_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AVR92562.1|2281395_2281965_-	guanylate kinase	NA	NA	NA	NA	NA
AVR92563.1|2282146_2283592_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	24.9	4.1e-29
>prophage 147
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2298094	2319183	2928142	protease	Bacillus_virus(30.0%)	23	NA	NA
AVR92582.1|2298094_2298559_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	62.7	6.3e-48
AVR92583.1|2298571_2300941_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	43.2	1.4e-98
AVR93276.1|2300940_2301705_-	carboxylesterase	NA	NA	NA	NA	NA
AVR92584.1|2301721_2301820_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92585.1|2301859_2302096_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AVR92586.1|2302263_2302539_-	N-acetyltransferase	NA	NA	NA	NA	NA
AVR92587.1|2302528_2302813_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92588.1|2302904_2304710_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	32.4	1.6e-75
AVR92589.1|2304735_2304831_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92590.1|2304902_2305730_-	NAD(+) synthetase	NA	G3MA24	Bacillus_virus	55.3	1.2e-73
AVR92591.1|2305732_2307217_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	44.9	8.6e-107
AVR92592.1|2307294_2307705_-	GtrA family protein	NA	NA	NA	NA	NA
AVR92593.1|2307923_2309471_-	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXE4	Bacillus_phage	39.1	2.7e-18
AVR92594.1|2309487_2310198_-	hypothetical protein	NA	NA	NA	NA	NA
AVR93277.1|2310221_2310746_-	PhoP family transcriptional regulator	NA	NA	NA	NA	NA
AVR92595.1|2311243_2312869_-	molecular chaperone GroEL	NA	A0A219YK78	uncultured_virus	55.3	1.8e-153
AVR92596.1|2312926_2313211_-	co-chaperone GroES	NA	A0A221S328	uncultured_virus	44.1	3.6e-14
AVR92597.1|2313443_2313620_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92598.1|2313638_2314292_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AVR92599.1|2314334_2314985_-	transcriptional regulator	NA	NA	NA	NA	NA
AVR92600.1|2315198_2317145_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	31.3	5.0e-54
AVR92601.1|2317159_2317792_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AVR92602.1|2317974_2319183_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.4	2.5e-27
>prophage 148
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2324203	2325352	2928142		Streptococcus_phage(100.0%)	1	NA	NA
AVR92607.1|2324203_2325352_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	36.7	6.8e-43
>prophage 149
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2339117	2339873	2928142		Escherichia_phage(100.0%)	1	NA	NA
AVR92622.1|2339117_2339873_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	25.8	2.5e-14
>prophage 150
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2346450	2361193	2928142		Mycoplasma_phage(28.57%)	14	NA	NA
AVR92630.1|2346450_2347305_-	CHAP domain-containing protein	NA	Q45NF0	Actinomyces_virus	28.4	9.3e-05
AVR92631.1|2347670_2348744_-	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVR92632.1|2348740_2349577_-	ABC transporter permease	NA	NA	NA	NA	NA
AVR92633.1|2349576_2350383_-	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	24.5	4.3e-12
AVR92634.1|2350401_2351487_-	spermidine/putrescine ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	42.6	7.6e-36
AVR92635.1|2351512_2352055_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVR92636.1|2352318_2353311_+	NADPH:quinone reductase	NA	NA	NA	NA	NA
AVR92637.1|2353326_2354100_+	phosphopantothenate--cysteine ligase	NA	Q9HH70	Methanothermobacter_phage	31.0	2.6e-14
AVR92638.1|2354096_2354651_+	phosphopantothenoylcysteine decarboxylase	NA	Q9J5A8	Fowlpox_virus	38.9	8.1e-26
AVR92639.1|2354654_2355290_+	ECF transporter S component	NA	NA	NA	NA	NA
AVR92640.1|2355345_2356551_-	aminoacyltransferase	NA	NA	NA	NA	NA
AVR92641.1|2356788_2357295_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	28.4	8.5e-06
AVR92642.1|2357557_2358517_+	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA	NA
AVR92643.1|2358583_2361193_-	ATP-dependent RecD-like DNA helicase	NA	A0A1P8DII4	Virus_Rctr197k	35.2	3.0e-38
>prophage 151
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2375934	2377650	2928142		Bacillus_phage(100.0%)	1	NA	NA
AVR92659.1|2375934_2377650_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.9	2.5e-57
>prophage 152
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2385133	2388331	2928142		Gordonia_phage(100.0%)	1	NA	NA
AVR92667.1|2385133_2388331_-	Snf2 family helicase	NA	A0A160DDK8	Gordonia_phage	26.6	1.3e-35
>prophage 153
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2397376	2417487	2928142		Streptococcus_phage(28.57%)	19	NA	NA
AVR92677.1|2397376_2398564_+	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.2	1.7e-36
AVR92678.1|2398616_2398712_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92679.1|2398726_2399548_+	NUDIX hydrolase	NA	G3MA14	Bacillus_virus	29.7	3.0e-24
AVR92680.1|2399564_2400089_+	N-acetyltransferase	NA	NA	NA	NA	NA
AVR92681.1|2400133_2400565_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92682.1|2400756_2401881_-	LytR family transcriptional regulator	NA	A0A1X9I5X1	Streptococcus_phage	33.3	5.3e-24
AVR92683.1|2402061_2403246_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AVR92684.1|2403235_2404036_-	recombination regulator RecX	NA	NA	NA	NA	NA
AVR92685.1|2404167_2405538_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	38.5	1.5e-89
AVR92686.1|2405609_2405858_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AVR92687.1|2406038_2409116_-	beta-galactosidase subunit alpha	NA	L0N6M2	Herpes_simplex_virus	32.3	6.7e-146
AVR92688.1|2409093_2410593_-	amino acid permease	NA	NA	NA	NA	NA
AVR92689.1|2410741_2411572_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AVR92690.1|2411766_2413269_+	hypothetical protein	NA	C9E2L4	Enterococcus_phage	98.0	2.5e-271
AVR92691.1|2413390_2413759_-	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AVR92692.1|2413821_2414322_-	50S ribosomal protein L10	NA	NA	NA	NA	NA
AVR92693.1|2414644_2415334_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
AVR92694.1|2415445_2415868_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
AVR92695.1|2415990_2417487_-	Lsa family ABC-F type ribosomal protection protein	NA	Q6DMX7	Streptococcus_phage	26.4	2.8e-28
>prophage 154
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2424968	2425514	2928142		Bacillus_virus(100.0%)	1	NA	NA
AVR92703.1|2424968_2425514_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	31.3	1.2e-10
>prophage 155
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2430810	2434615	2928142		Cafeteria_roenbergensis_virus(33.33%)	5	NA	NA
AVR92710.1|2430810_2431566_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	46.3	1.3e-55
AVR92711.1|2431599_2432133_+	exonuclease	NA	M1PFD8	Streptococcus_phage	36.5	1.4e-22
AVR92712.1|2432141_2432321_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92713.1|2432253_2432844_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92714.1|2432932_2434615_-	thioredoxin reductase	NA	G3MA85	Bacillus_virus	37.8	8.1e-53
>prophage 156
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2442391	2462137	2928142		Streptococcus_phage(36.36%)	21	NA	NA
AVR93280.1|2442391_2443594_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	30.9	6.2e-23
AVR92722.1|2443593_2445114_-	D-alanine--poly(phosphoribitol) ligase subunit 1	NA	A0A2K9KZV5	Tupanvirus	27.5	2.9e-41
AVR92723.1|2445128_2445278_-	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
AVR92724.1|2445481_2447578_-	ABC transporter permease	NA	NA	NA	NA	NA
AVR92725.1|2447567_2448335_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.2	4.4e-30
AVR92726.1|2448740_2450924_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.8	4.0e-286
AVR92727.1|2450956_2451553_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	56.4	6.0e-51
AVR92728.1|2451597_2452716_-	DNA polymerase IV	NA	NA	NA	NA	NA
AVR92729.1|2452841_2453600_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
AVR92730.1|2453583_2454246_-	spermidine/putrescine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.1	3.9e-19
AVR92731.1|2454260_2455133_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	57.2	1.1e-80
AVR92732.1|2455244_2455592_-	initiation-control protein YabA	NA	M1PFV3	Streptococcus_phage	36.7	8.1e-16
AVR92733.1|2455584_2456424_-	signal peptidase	NA	NA	NA	NA	NA
AVR92734.1|2456540_2457491_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	33.0	6.2e-34
AVR92735.1|2457492_2457822_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92736.1|2457841_2458480_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	53.8	2.8e-54
AVR92737.1|2458560_2458677_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92738.1|2458688_2459285_-	recombination protein RecR	NA	NA	NA	NA	NA
AVR92739.1|2459460_2460123_-	thiaminase II	NA	NA	NA	NA	NA
AVR92740.1|2460134_2460788_-	cobalt ABC transporter permease	NA	NA	NA	NA	NA
AVR92741.1|2460778_2462137_-	cobalt ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	28.2	2.3e-13
>prophage 157
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2470677	2474733	2928142		Streptococcus_virus(50.0%)	3	NA	NA
AVR92752.1|2470677_2472438_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	43.0	1.5e-54
AVR92753.1|2472509_2473724_-	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
AVR92754.1|2473740_2474733_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	36.5	4.0e-52
>prophage 158
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2482675	2484178	2928142		Enterococcus_phage(100.0%)	1	NA	NA
AVR92766.1|2482675_2484178_+	hypothetical protein	NA	C9E2L4	Enterococcus_phage	98.0	1.9e-271
>prophage 159
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2488660	2493795	2928142	tRNA	Tupanvirus(50.0%)	4	NA	NA
AVR93282.1|2488660_2490598_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.3	4.0e-112
AVR92770.1|2490994_2491174_-	tautomerase	NA	NA	NA	NA	NA
AVR93283.1|2491339_2492764_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92771.1|2492931_2493795_-	aminoglycoside adenylyltransferase	NA	A0A1X9I6F2	Streptococcus_phage	41.1	1.3e-59
>prophage 160
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2508843	2509581	2928142		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
AVR92790.1|2508843_2509581_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.6	4.7e-21
>prophage 161
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2525810	2527616	2928142		Bodo_saltans_virus(50.0%)	2	NA	NA
AVR92805.1|2525810_2526401_-	peptidylprolyl isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	41.6	3.3e-25
AVR92806.1|2526605_2527616_+	ferredoxin--NADP(+) reductase	NA	Q9JRK7	Streptococcus_phage	50.0	8.9e-31
>prophage 162
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2534719	2536938	2928142		Planktothrix_phage(50.0%)	2	NA	NA
AVR93284.1|2534719_2535772_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.9	5.3e-26
AVR92814.1|2535999_2536938_-	glycosyltransferase	NA	V5USA4	Oenococcus_phage	50.5	1.8e-78
>prophage 163
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2543967	2552486	2928142		Bacillus_phage(50.0%)	9	NA	NA
AVR92822.1|2543967_2545116_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A167RG65	Powai_lake_megavirus	29.5	2.3e-30
AVR92823.1|2545132_2545624_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
AVR92824.1|2545630_2545810_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92825.1|2545866_2547636_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.4	2.8e-56
AVR92826.1|2547632_2549360_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.0	1.7e-45
AVR92827.1|2549588_2549975_+	DUF454 domain-containing protein	NA	NA	NA	NA	NA
AVR92828.1|2550280_2550493_+	DUF1447 domain-containing protein	NA	NA	NA	NA	NA
AVR92829.1|2550494_2552180_+	ribonuclease J	NA	NA	NA	NA	NA
AVR92830.1|2552285_2552486_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.2	5.3e-20
>prophage 164
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2558164	2561452	2928142	tRNA	Streptococcus_phage(50.0%)	2	NA	NA
AVR92835.1|2558164_2558764_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	36.9	7.7e-22
AVR92836.1|2558809_2561452_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	42.9	4.4e-162
>prophage 165
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2564547	2567360	2928142		Moraxella_phage(50.0%)	3	NA	NA
AVR92840.1|2564547_2565861_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	32.7	5.7e-46
AVR92841.1|2566041_2566779_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AVR92842.1|2566778_2567360_-	acetyltransferase	NA	M1HKK6	Paramecium_bursaria_Chlorella_virus	50.9	7.5e-06
>prophage 166
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2579494	2580454	2928142	transposase	unidentified_phage(100.0%)	1	NA	NA
AVR92856.1|2579494_2580454_+|transposase	IS30-like element IS1062 family transposase	transposase	H7BW61	unidentified_phage	24.9	1.7e-07
>prophage 167
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2585296	2585896	2928142	integrase	Bacillus_phage(100.0%)	1	2580440:2580457	2592254:2592271
2580440:2580457	attL	TCTAACTTAATTTGACAA	NA	NA	NA	NA
AVR92860.1|2585296_2585896_-|integrase	site-specific integrase	integrase	D2XR58	Bacillus_phage	35.6	2.5e-28
AVR92860.1|2585296_2585896_-|integrase	site-specific integrase	integrase	D2XR58	Bacillus_phage	35.6	2.5e-28
2592254:2592271	attR	TCTAACTTAATTTGACAA	NA	NA	NA	NA
>prophage 168
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2593416	2594586	2928142	integrase	Bacillus_phage(100.0%)	1	2592143:2592156	2600198:2600211
2592143:2592156	attL	CAGACATTTATTTC	NA	NA	NA	NA
AVR92870.1|2593416_2594586_+|integrase	site-specific integrase	integrase	A0A1B0T6A8	Bacillus_phage	28.6	4.6e-31
AVR92870.1|2593416_2594586_+|integrase	site-specific integrase	integrase	A0A1B0T6A8	Bacillus_phage	28.6	4.6e-31
2600198:2600211	attR	CAGACATTTATTTC	NA	NA	NA	NA
>prophage 169
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2598151	2605002	2928142		Enterococcus_phage(40.0%)	7	NA	NA
AVR92875.1|2598151_2598376_+	NrdH-redoxin	NA	A0A0M7REK7	Lactobacillus_phage	49.3	6.4e-14
AVR92876.1|2598377_2598755_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	37.8	1.2e-12
AVR92877.1|2598735_2600895_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	63.3	1.0e-265
AVR92878.1|2601095_2602061_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	71.3	2.1e-130
AVR92879.1|2602100_2603387_-	TPM domain-containing protein	NA	NA	NA	NA	NA
AVR92880.1|2603431_2604001_-	LemA family protein	NA	NA	NA	NA	NA
AVR92881.1|2604300_2605002_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	40.8	1.9e-16
>prophage 170
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2608414	2609023	2928142		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
AVR92885.1|2608414_2609023_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	57.1	5.1e-66
>prophage 171
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2624536	2630327	2928142		Staphylococcus_phage(33.33%)	6	NA	NA
AVR93288.1|2624536_2625994_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	32.9	3.8e-67
AVR92901.1|2625998_2626814_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
AVR92902.1|2626987_2627359_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AVR92903.1|2627428_2628028_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0E3XCL7	Enterococcus_phage	55.0	6.4e-37
AVR92904.1|2628533_2628644_+	hypothetical protein	NA	NA	NA	NA	NA
AVR92905.1|2628845_2630327_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	38.2	2.2e-86
>prophage 172
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2650423	2651134	2928142		Planktothrix_phage(100.0%)	1	NA	NA
AVR92920.1|2650423_2651134_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	6.1e-34
>prophage 173
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2654541	2655696	2928142		Micromonas_sp._RCC1109_virus(100.0%)	1	NA	NA
AVR92924.1|2654541_2655696_-	mannitol-1-phosphate 5-dehydrogenase	NA	E5EQS6	Micromonas_sp._RCC1109_virus	29.8	1.2e-15
>prophage 174
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2671279	2672407	2928142		uncultured_virus(100.0%)	1	NA	NA
AVR92941.1|2671279_2672407_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	A0A218MNE0	uncultured_virus	45.7	6.4e-86
>prophage 175
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2696958	2699129	2928142		Bacillus_phage(100.0%)	2	NA	NA
AVR92958.1|2696958_2698440_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	35.0	4.1e-32
AVR92959.1|2698436_2699129_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.4	5.3e-35
>prophage 176
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2702373	2705158	2928142		Synechococcus_phage(50.0%)	3	NA	NA
AVR92962.1|2702373_2703060_-	HAD family phosphatase	NA	A0A1D8KNV9	Synechococcus_phage	25.4	5.3e-11
AVR92963.1|2703246_2704599_+	aspartate kinase	NA	NA	NA	NA	NA
AVR92964.1|2704621_2705158_-	HAD family hydrolase	NA	A0A0N9SIY2	Staphylococcus_phage	41.8	4.6e-26
>prophage 177
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2714931	2717418	2928142		uncultured_virus(100.0%)	1	NA	NA
AVR92977.1|2714931_2717418_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	34.7	1.1e-93
>prophage 178
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2723770	2730237	2928142		Pandoravirus(50.0%)	7	NA	NA
AVR92984.1|2723770_2725201_+	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	26.2	2.8e-30
AVR92985.1|2725237_2726374_-	cystathionine gamma-synthase	NA	A0A0B5JD48	Pandoravirus	27.2	2.1e-20
AVR92986.1|2726387_2727305_-	cysteine synthase family protein	NA	C3U2M1	Lactococcus_phage	40.5	9.2e-59
AVR92987.1|2727394_2727532_-	hypothetical protein	NA	NA	NA	NA	NA
AVR92988.1|2727700_2728261_-	elongation factor P	NA	NA	NA	NA	NA
AVR92989.1|2728615_2729263_+	elongation factor G-binding protein	NA	NA	NA	NA	NA
AVR92990.1|2729301_2730237_-	dihydroorotate dehydrogenase	NA	A0A1V0SH91	Hokovirus	44.3	1.0e-57
>prophage 179
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2734758	2736402	2928142		Golden_Marseillevirus(50.0%)	3	NA	NA
AVR92996.1|2734758_2735433_-	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	28.7	5.2e-11
AVR92997.1|2735445_2735958_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AVR93297.1|2735970_2736402_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.0	3.7e-18
>prophage 180
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2754902	2762763	2928142	tRNA,protease	Tupanvirus(25.0%)	6	NA	NA
AVR93007.1|2754902_2756399_-|tRNA	lysine--tRNA ligase	tRNA	A0A2K9L3L6	Tupanvirus	39.0	2.6e-87
AVR93008.1|2756492_2757491_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AVR93009.1|2757502_2758399_-	redox-regulated molecular chaperone Hsp33	NA	NA	NA	NA	NA
AVR93010.1|2758560_2760717_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	C7U047	Ostreococcus_tauri_virus	50.6	1.6e-109
AVR93011.1|2760810_2761356_-	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	27.7	6.3e-07
AVR93012.1|2761374_2762763_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	R4TVK3	Phaeocystis_globosa_virus	25.4	1.0e-13
>prophage 181
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2773426	2774938	2928142		Bacillus_phage(100.0%)	1	NA	NA
AVR93023.1|2773426_2774938_-	CHAP domain-containing protein	NA	Q9ZXE4	Bacillus_phage	45.8	3.6e-20
>prophage 182
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2779874	2781237	2928142		Planktothrix_phage(50.0%)	2	NA	NA
AVR93029.1|2779874_2780615_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.6	6.5e-31
AVR93030.1|2780661_2781237_-	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	34.9	4.6e-16
>prophage 183
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2785413	2787098	2928142		Bacillus_phage(50.0%)	2	NA	NA
AVR93036.1|2785413_2786289_-	energy-coupling factor ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.8	5.9e-15
AVR93037.1|2786258_2787098_-	energy-coupling factor ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.1	5.3e-21
>prophage 184
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2804555	2813084	2928142		Tupanvirus(33.33%)	9	NA	NA
AVR93069.1|2804555_2805722_-	class I SAM-dependent methyltransferase	NA	A0A2K9L0U7	Tupanvirus	36.9	1.3e-46
AVR93070.1|2805993_2806818_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
AVR93071.1|2806999_2808187_-	elongation factor Tu	NA	NA	NA	NA	NA
AVR93072.1|2808337_2810419_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	29.1	7.2e-67
AVR93073.1|2810502_2810973_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
AVR93074.1|2811028_2811442_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
AVR93075.1|2811420_2811699_-	hypothetical protein	NA	NA	NA	NA	NA
AVR93076.1|2811786_2812467_+	ribose-5-phosphate isomerase	NA	NA	NA	NA	NA
AVR93077.1|2812508_2813084_+	recombinase family protein	NA	Q1MVM2	Enterobacteria_phage	38.1	7.3e-22
>prophage 185
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2816318	2820883	2928142		uncultured_Caudovirales_phage(33.33%)	5	NA	NA
AVR93081.1|2816318_2817329_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.6	1.7e-21
AVR93082.1|2817325_2818126_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.5	8.4e-16
AVR93083.1|2818362_2819301_+	ferrichrome ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVR93084.1|2819339_2820047_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
AVR93085.1|2820064_2820883_-	purine-nucleoside phosphorylase	NA	Q5YBA4	Grouper_iridovirus	41.4	1.8e-53
>prophage 186
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2827537	2829106	2928142		Staphylococcus_phage(100.0%)	1	NA	NA
AVR93095.1|2827537_2829106_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.7	1.0e-20
>prophage 187
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2832742	2834044	2928142		Geobacillus_virus(100.0%)	1	NA	NA
AVR93100.1|2832742_2834044_-	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.7	8.9e-124
>prophage 188
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2838997	2840560	2928142		Hokovirus(100.0%)	1	NA	NA
AVR93106.1|2838997_2840560_+	GMP synthase (glutamine-hydrolyzing)	NA	A0A1V0SH76	Hokovirus	29.5	6.0e-18
>prophage 189
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2846562	2850422	2928142	transposase	Geobacillus_virus(50.0%)	3	NA	NA
AVR93110.1|2846562_2847018_-|transposase	IS200/IS605 family transposase	transposase	A0A0H3UZM0	Geobacillus_virus	34.2	9.6e-17
AVR93111.1|2847519_2848788_+	radical SAM/SPASM domain-containing protein	NA	NA	NA	NA	NA
AVR93112.1|2848787_2850422_+	ABC transporter ATP-binding protein	NA	F2Y165	Organic_Lake_phycodnavirus	22.8	3.5e-16
>prophage 190
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2870067	2872290	2928142	tRNA	Yaba-like_disease_virus(50.0%)	2	NA	NA
AVR93127.1|2870067_2870982_+	alpha/beta hydrolase	NA	Q9DHU9	Yaba-like_disease_virus	26.3	5.6e-16
AVR93128.1|2871018_2872290_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.3	3.5e-93
>prophage 191
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2901471	2902365	2928142		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
AVR93153.1|2901471_2902365_-	KR domain-containing protein	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	44.6	2.2e-57
>prophage 192
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2908154	2909171	2928142		uncultured_virus(100.0%)	1	NA	NA
AVR93158.1|2908154_2909171_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	30.8	3.1e-07
>prophage 193
CP028285	Enterococcus faecalis strain FDAARGOS_324 chromosome, complete genome	2928142	2917534	2921780	2928142		Chrysochromulina_ericina_virus(33.33%)	4	NA	NA
AVR93164.1|2917534_2918911_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7P8	Chrysochromulina_ericina_virus	34.6	9.3e-31
AVR93165.1|2919121_2919943_-	pur operon repressor	NA	A0A1V0SKE5	Klosneuvirus	26.4	3.6e-06
AVR93166.1|2920086_2920926_-	metal ABC transporter permease	NA	NA	NA	NA	NA
AVR93167.1|2921087_2921780_-	metal ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	31.6	3.0e-14
>prophage 1
CP028284	Enterococcus faecalis strain FDAARGOS_324 plasmid unnamed2, complete sequence	78592	36094	44362	78592		Streptococcus_virus(16.67%)	15	NA	NA
AVR90446.1|36094_37882_-	lysozyme	NA	A0A1U9WRD0	Streptococcus_virus	43.2	8.1e-27
AVR90447.1|38019_38736_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90448.1|38930_39113_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90449.1|39166_39412_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90450.1|39519_39849_-	PcfU	NA	C9E2N6	Enterococcus_phage	74.5	2.4e-41
AVR90451.1|39845_40436_-	thermonuclease	NA	O64020	Bacillus_phage	54.4	6.4e-37
AVR90452.1|40447_40600_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90453.1|40613_41066_-	single-stranded DNA-binding protein	NA	A0A097PAQ3	Streptococcus_pyogenes_phage	61.3	1.6e-43
AVR90489.1|41131_41524_-	PcfR	NA	NA	NA	NA	NA
AVR90454.1|41680_41911_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90455.1|42012_42213_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90456.1|42508_42694_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90457.1|42696_42870_+	PcfM protein	NA	NA	NA	NA	NA
AVR90458.1|42893_43445_+	hypothetical protein	NA	A0A1B0XUG6	Freshwater_phage	38.8	2.0e-08
AVR90459.1|43588_44362_+	hypothetical protein	NA	A8ATL9	Listeria_phage	49.5	3.9e-18
>prophage 1
CP028283	Enterococcus faecalis strain FDAARGOS_324 plasmid unnamed3, complete sequence	49440	0	6082	49440		Listeria_phage(20.0%)	12	NA	NA
AVR90352.1|723_1503_-	hypothetical protein	NA	A8ATL9	Listeria_phage	46.2	7.4e-17
AVR90353.1|1638_2190_-	hypothetical protein	NA	A0A1B0XUG6	Freshwater_phage	38.8	2.0e-08
AVR90354.1|2213_2387_-	PcfM protein	NA	NA	NA	NA	NA
AVR90355.1|2389_2575_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90356.1|2580_3030_-	PcfO	NA	NA	NA	NA	NA
AVR90404.1|3161_3347_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90357.1|3316_3517_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90358.1|3618_3849_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90359.1|3903_4398_+	PcfR	NA	NA	NA	NA	NA
AVR90360.1|4462_4915_+	single-stranded DNA-binding protein	NA	A0A097PAQ3	Streptococcus_pyogenes_phage	62.7	9.1e-44
AVR90361.1|5092_5671_+	thermonuclease	NA	O64020	Bacillus_phage	55.9	4.8e-37
AVR90362.1|5752_6082_+	PcfU	NA	C9E2N6	Enterococcus_phage	75.5	1.4e-41
>prophage 2
CP028283	Enterococcus faecalis strain FDAARGOS_324 plasmid unnamed3, complete sequence	49440	9162	12752	49440		Clostridioides_phage(50.0%)	8	NA	NA
AVR90366.1|9162_9807_+	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	31.9	2.0e-15
AVR90367.1|9825_10035_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90368.1|10056_10281_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90369.1|10312_10501_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90405.1|10641_11160_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90406.1|11107_11329_+	excinuclease ABC subunit C	NA	NA	NA	NA	NA
AVR90370.1|11466_11841_-	hypothetical protein	NA	NA	NA	NA	NA
AVR90371.1|11840_12752_-	chromosome partitioning protein ParA	NA	F0PIG8	Enterococcus_phage	34.3	2.9e-36
>prophage 3
CP028283	Enterococcus faecalis strain FDAARGOS_324 plasmid unnamed3, complete sequence	49440	30557	30992	49440		Lactococcus_phage(100.0%)	1	NA	NA
AVR90383.1|30557_30992_+	type III secretion system protein PrgE	NA	Q38339	Lactococcus_phage	37.5	3.5e-16
>prophage 4
CP028283	Enterococcus faecalis strain FDAARGOS_324 plasmid unnamed3, complete sequence	49440	35100	40534	49440		Staphylococcus_phage(50.0%)	6	NA	NA
AVR90388.1|35100_37716_+	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	35.4	1.8e-14
AVR90389.1|37739_38366_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90390.1|38343_38598_+	type III secretion system protein PrgM	NA	NA	NA	NA	NA
AVR90391.1|38581_39190_+	PcfA protein	NA	NA	NA	NA	NA
AVR90392.1|39303_40059_+	hypothetical protein	NA	NA	NA	NA	NA
AVR90393.1|40075_40534_+	single-stranded DNA-binding protein	NA	A0A290GHL8	Caldibacillus_phage	46.8	1.3e-26
