The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	0	14227	1831911	portal,terminase	Campylobacter_phage(100.0%)	14	NA	NA
AVS36078.1|456_6183_-	hypothetical protein	NA	X2KLJ2	Campylobacter_phage	100.0	0.0e+00
AVS36079.1|6242_6581_+	hypothetical protein	NA	X2KLU6	Campylobacter_phage	100.0	1.6e-56
AVS36080.1|6572_6788_-	hypothetical protein	NA	X2KXE3	Campylobacter_phage	100.0	2.2e-32
AVS36081.1|6868_7225_-	DNA repair protein	NA	X2KRE9	Campylobacter_phage	100.0	1.8e-58
AVS36082.1|7221_8202_-	hypothetical protein	NA	X2KRA7	Campylobacter_phage	100.0	2.3e-180
AVS36083.1|8373_8724_-	hypothetical protein	NA	X2KXE7	Campylobacter_phage	100.0	7.3e-57
AVS36084.1|8724_9267_-	hypothetical protein	NA	X2KRF4	Campylobacter_phage	99.4	1.7e-92
AVS36085.1|9263_10436_-|portal	phage portal protein	portal	X2KR48	Campylobacter_phage	100.0	3.1e-216
AVS36086.1|10595_11030_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	X2KQB2	Campylobacter_phage	100.0	3.2e-78
AVS36087.1|11084_12710_-|terminase	terminase large subunit	terminase	X2KXM1	Campylobacter_phage	99.8	0.0e+00
AVS36088.1|12713_13349_-|terminase	terminase	terminase	X2KRQ1	Campylobacter_phage	99.1	1.3e-109
AVS36089.1|13408_13594_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36090.1|13608_13950_-	HNH endonuclease	NA	X2KRE4	Campylobacter_phage	100.0	1.1e-62
AVS36091.1|13936_14227_-	hypothetical protein	NA	X2KM44	Campylobacter_phage	97.4	2.6e-15
>prophage 2
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	19507	26498	1831911	tRNA	Tupanvirus(25.0%)	7	NA	NA
AVS36097.1|19507_20899_-|tRNA	glutamate--tRNA ligase	tRNA	A0A2K9L0I5	Tupanvirus	29.8	3.3e-15
AVS36098.1|20963_21779_+	hypothetical protein	NA	NA	NA	NA	NA
AVS36099.1|21816_23148_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AVS36100.1|23149_23605_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AVS36101.1|23752_24313_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	60.0	2.8e-58
AVS36102.1|24361_25366_+	UDP-N-acetylglucosamine 4,6-dehydratase (inverting)	NA	A0A2P1ELS8	Moumouvirus	38.9	6.3e-45
AVS36103.1|25367_26498_+	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	A0A2D2W2B8	Stenotrophomonas_phage	31.0	6.3e-17
>prophage 3
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	36320	37829	1831911		Tupanvirus(100.0%)	1	NA	NA
AVS36115.1|36320_37829_+	amino acid adenylation protein	NA	A0A2K9L3I8	Tupanvirus	29.4	5.1e-38
>prophage 4
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	41903	50524	1831911		uncultured_Mediterranean_phage(50.0%)	9	NA	NA
AVS36119.1|41903_42602_+	pseudaminic acid cytidylyltransferase	NA	A0A1B1IVD3	uncultured_Mediterranean_phage	27.5	5.3e-06
AVS36120.1|42585_43410_+	UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase	NA	NA	NA	NA	NA
AVS36121.1|43406_43880_+	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	NA	NA	NA	NA	NA
AVS36122.1|43844_44591_-	imidazole glycerol phosphate synthase subunit HisF	NA	A0A1V0SIZ6	Klosneuvirus	21.9	2.3e-07
AVS37812.1|44591_45197_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
AVS36123.1|45193_46330_-	N-acetyl sugar amidotransferase	NA	NA	NA	NA	NA
AVS36124.1|46587_47619_+	pseudaminic acid synthase	NA	A0A1B1IVE2	uncultured_Mediterranean_phage	33.7	1.4e-31
AVS36125.1|47615_49556_+	PseD protein	NA	NA	NA	NA	NA
AVS36126.1|49552_50524_+	NAD-dependent dehydratase	NA	A0A0P0YMS6	Yellowstone_lake_phycodnavirus	29.8	3.3e-30
>prophage 5
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	55077	58263	1831911		uncultured_Mediterranean_phage(50.0%)	3	NA	NA
AVS36131.1|55077_56082_+	N-acetylneuraminate synthase	NA	A0A1B1IVE2	uncultured_Mediterranean_phage	35.0	2.3e-34
AVS36132.1|56074_57229_+	UDP-N-acetylglucosamine 2-epimerase (hydrolyzing)	NA	NA	NA	NA	NA
AVS36133.1|57237_58263_+	CBS domain-containing protein	NA	G3MA50	Bacillus_virus	26.6	5.5e-12
>prophage 6
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	77397	78405	1831911	tRNA	Moraxella_phage(100.0%)	1	NA	NA
AVS36146.1|77397_78405_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	37.0	3.5e-43
>prophage 7
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	84954	87606	1831911		uncultured_Caudovirales_phage(50.0%)	3	NA	NA
AVS36154.1|84954_85923_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	47.5	6.3e-74
AVS36155.1|85915_86854_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AVS36156.1|86850_87606_+	iron ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	32.1	8.2e-21
>prophage 8
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	97644	98652	1831911		Dinoroseobacter_phage(100.0%)	1	NA	NA
AVS36163.1|97644_98652_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A1V0DYC6	Dinoroseobacter_phage	31.7	2.0e-06
>prophage 9
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	104303	106100	1831911		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
AVS36167.1|104303_106100_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1I9J5	Paramecium_bursaria_Chlorella_virus	36.4	1.7e-93
>prophage 10
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	109670	110990	1831911		Moraxella_phage(100.0%)	1	NA	NA
AVS36170.1|109670_110990_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	30.3	1.6e-51
>prophage 11
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	115270	115873	1831911		Cassava_brown_streak_virus(100.0%)	1	NA	NA
AVS36175.1|115270_115873_-	non-canonical purine NTP pyrophosphatase	NA	A0A2P1DNP2	Cassava_brown_streak_virus	29.7	1.0e-10
>prophage 12
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	125225	126650	1831911		Tupanvirus(100.0%)	1	NA	NA
AVS36185.1|125225_126650_+	catalase	NA	A0A2K9L0T1	Tupanvirus	45.1	1.7e-91
>prophage 13
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	130994	132362	1831911		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
AVS36189.1|130994_132362_+	adenylosuccinate lyase	NA	A0A1B1ISB0	uncultured_Mediterranean_phage	23.6	8.4e-08
>prophage 14
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	137348	138173	1831911		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
AVS36194.1|137348_138173_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	F2NZ40	Diadromus_pulchellus_ascovirus	24.6	1.4e-05
>prophage 15
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	142463	146617	1831911		Bacillus_phage(50.0%)	5	NA	NA
AVS36201.1|142463_143834_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	33.1	9.2e-55
AVS36202.1|143955_144492_+	flagellar basal body protein FliL	NA	NA	NA	NA	NA
AVS36203.1|144491_144839_+	holo-ACP synthase	NA	NA	NA	NA	NA
AVS36204.1|144839_145259_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36205.1|145255_146617_-	cytochrome P450	NA	A0A2I2L481	Orpheovirus	24.6	9.8e-33
>prophage 16
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	151054	152318	1831911		Tupanvirus(50.0%)	2	NA	NA
AVS36209.1|151054_151567_-	adenylyl-sulfate kinase	NA	A0A2K9L4R9	Tupanvirus	31.5	2.0e-07
AVS36210.1|151556_152318_-	sugar nucleotidyltransferase	NA	G3MA50	Bacillus_virus	56.9	3.4e-06
>prophage 17
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	158753	163673	1831911		Synechococcus_phage(33.33%)	6	NA	NA
AVS36217.1|158753_159428_-	D-glycero-D-manno-heptose 1-phosphate guanosyltransferase	NA	A0A0G2Y8M0	Acanthamoeba_polyphaga_mimivirus	25.9	3.9e-06
AVS36218.1|159415_160021_-	SIS domain-containing protein	NA	A0A067XQR2	Caulobacter_phage	35.0	3.7e-16
AVS36219.1|160008_161028_-	dehydrogenase	NA	A0A222YW25	Synechococcus_phage	40.5	4.6e-59
AVS36220.1|161024_162056_-	GDP-mannose 4,6 dehydratase	NA	A0A222YY99	Synechococcus_phage	73.0	1.0e-146
AVS36221.1|162066_163128_-	GDP-L-fucose synthase	NA	M1HKX0	Paramecium_bursaria_Chlorella_virus	50.1	9.9e-89
AVS36222.1|163127_163673_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A1D7XFA9	Escherichia_phage	32.8	2.7e-18
>prophage 18
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	169116	173453	1831911		Tupanvirus(50.0%)	4	NA	NA
AVS36227.1|169116_170220_-	UDP-galactopyranose mutase	NA	E4ZFQ1	Streptococcus_phage	37.1	1.2e-65
AVS36228.1|170221_171196_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	38.7	3.1e-57
AVS36229.1|171192_172491_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	37.9	4.9e-74
AVS36230.1|172496_173453_-	SDR family NAD-dependent epimerase/dehydratase	NA	A0A2K9KZK0	Tupanvirus	48.9	3.1e-81
>prophage 19
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	177555	181953	1831911		Tetraselmis_virus(50.0%)	4	NA	NA
AVS36234.1|177555_178503_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	32.5	1.7e-39
AVS36235.1|178512_180171_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVS36236.1|180172_181291_-	capsule biosynthesis protein	NA	NA	NA	NA	NA
AVS36237.1|181290_181953_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	21.6	1.7e-06
>prophage 20
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	204853	206266	1831911		Vibrio_phage(100.0%)	1	NA	NA
AVS36262.1|204853_206266_-	pilus (MSHA type) biogenesis protein MshL	NA	R9TEZ5	Vibrio_phage	25.8	5.6e-15
>prophage 21
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	215620	217987	1831911		Campylobacter_virus(100.0%)	1	NA	NA
AVS36270.1|215620_217987_-	hypothetical protein	NA	H6SUL3	Campylobacter_virus	29.0	3.0e-05
>prophage 22
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	225354	229303	1831911		Acinetobacter_phage(50.0%)	5	NA	NA
AVS36282.1|225354_226473_-	carbamoyl-phosphate synthase small chain	NA	A0A0P0IKJ1	Acinetobacter_phage	30.1	1.3e-06
AVS36283.1|226472_227024_-	DUF507 domain-containing protein	NA	NA	NA	NA	NA
AVS36284.1|227116_227635_-	nucleosidase	NA	NA	NA	NA	NA
AVS36285.1|227627_228056_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36286.1|228052_229303_-	adenylosuccinate synthetase	NA	L7Y4J5	Megavirus	38.0	8.1e-74
>prophage 23
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	237843	239946	1831911		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
AVS36293.1|237843_239946_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	81.2	3.6e-10
>prophage 24
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	259870	269880	1831911		Cyanophage(20.0%)	10	NA	NA
AVS36311.1|259870_260860_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SQF5	Cyanophage	43.8	3.1e-60
AVS36312.1|260920_261526_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
AVS36313.1|261522_262272_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
AVS36314.1|262246_262978_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	NA	A0A218MMX0	uncultured_virus	42.2	7.9e-13
AVS36315.1|262974_264012_-	ATP-binding protein	NA	NA	NA	NA	NA
AVS36316.1|264076_264526_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA	NA
AVS36317.1|264652_265873_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
AVS36318.1|265866_266691_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	44.9	1.7e-56
AVS36319.1|266772_268746_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	36.9	3.8e-78
AVS36320.1|268884_269880_-	ABC transporter ATP-binding protein	NA	A0A2H4UUX5	Bodo_saltans_virus	27.7	1.2e-11
>prophage 25
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	276559	280077	1831911		Tupanvirus(50.0%)	2	NA	NA
AVS36329.1|276559_277636_-	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L7I1	Tupanvirus	41.8	2.9e-72
AVS36330.1|277767_280077_+	DEAD/DEAH box helicase	NA	A0A097BY72	Enterococcus_phage	27.6	5.0e-21
>prophage 26
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	285682	287167	1831911		Acinetobacter_phage(100.0%)	1	NA	NA
AVS36332.1|285682_287167_+	DNA methyltransferase	NA	J7I0U9	Acinetobacter_phage	32.3	2.5e-37
>prophage 27
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	291974	295924	1831911		Staphylococcus_phage(50.0%)	3	NA	NA
AVS36337.1|291974_292397_+	low molecular weight phosphatase family protein	NA	A0A2H4PQT9	Staphylococcus_phage	40.9	3.6e-10
AVS36338.1|292390_293434_+	arsenical-resistance protein	NA	NA	NA	NA	NA
AVS36339.1|293935_295924_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	78.2	6.3e-12
>prophage 28
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	311840	312506	1831911		Bacillus_virus(100.0%)	1	NA	NA
AVS36355.1|311840_312506_-	peptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	8.8e-11
>prophage 29
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	319941	321573	1831911		Aureococcus_anophage(100.0%)	1	NA	NA
AVS36361.1|319941_321573_-	multidrug ABC transporter permease/ATP-binding protein	NA	A0A076FI99	Aureococcus_anophage	26.2	5.5e-14
>prophage 30
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	327374	331935	1831911		Cellulophaga_phage(50.0%)	5	NA	NA
AVS36370.1|327374_328274_+	ATP phosphoribosyltransferase	NA	A0A0F7Q4B0	Cellulophaga_phage	67.6	2.0e-05
AVS36371.1|328281_329568_+	histidinol dehydrogenase	NA	NA	NA	NA	NA
AVS36372.1|329564_330623_+	bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase	NA	NA	NA	NA	NA
AVS36373.1|330619_331207_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
AVS36374.1|331203_331935_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	A0A2H4UVM0	Bodo_saltans_virus	27.0	3.4e-08
>prophage 31
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	345828	353174	1831911		Brazilian_cedratvirus(33.33%)	7	NA	NA
AVS36389.1|345828_346605_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	27.8	6.9e-15
AVS36390.1|346601_347408_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVS36391.1|347404_348322_-	radical SAM/SPASM domain-containing protein	NA	NA	NA	NA	NA
AVS36392.1|348427_349687_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	27.6	1.3e-34
AVS36393.1|349672_350692_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AVS36394.1|350764_351517_+	hypothetical protein	NA	NA	NA	NA	NA
AVS36395.1|352193_353174_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.9	2.6e-27
>prophage 32
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	361513	366563	1831911		Pandoravirus(25.0%)	5	NA	NA
AVS36406.1|361513_362602_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	39.2	1.4e-61
AVS36407.1|362601_363276_-	ribonuclease 3	NA	A0A2K9L8W0	Tupanvirus	35.4	1.9e-24
AVS36408.1|363262_363703_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	40.7	2.2e-26
AVS36409.1|363689_364676_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36410.1|364745_366563_+	DNA primase	NA	I6P4U6	Helicobacter_phage	28.7	1.7e-51
>prophage 33
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	370124	370970	1831911		Indivirus(100.0%)	1	NA	NA
AVS36416.1|370124_370970_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	28.6	2.8e-09
>prophage 34
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	373989	374712	1831911		Planktothrix_phage(100.0%)	1	NA	NA
AVS36419.1|373989_374712_+	sulfate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.8	4.1e-22
>prophage 35
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	378643	381425	1831911		uncultured_Caudovirales_phage(66.67%)	3	NA	NA
AVS36425.1|378643_379102_-	NlpC/P60 family protein	NA	A0A2H5BM69	Streptomyces_phage	43.9	7.9e-19
AVS36426.1|379110_380280_-	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	42.1	2.2e-65
AVS36427.1|380276_381425_-	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	45.3	2.3e-75
>prophage 36
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	389122	396599	1831911		Planktothrix_phage(25.0%)	10	NA	NA
AVS36434.1|389122_389776_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.2	2.7e-28
AVS36435.1|389772_390261_+	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
AVS36436.1|390221_390725_+	thioredoxin	NA	NA	NA	NA	NA
AVS36437.1|390734_391172_-	DUF411 domain-containing protein	NA	NA	NA	NA	NA
AVS36438.1|391452_391878_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36439.1|392554_393403_-	DNA ligase	NA	A0A1X9VNY8	Mimivirus	33.5	2.6e-31
AVS36440.1|393402_394065_-	AMIN domain-containing protein	NA	NA	NA	NA	NA
AVS36441.1|394054_394258_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36442.1|394323_395568_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	52.6	7.7e-109
AVS36443.1|395567_396599_-	DNA recombination/repair protein RecA	NA	A0A0S2MVG1	Bacillus_phage	63.4	1.5e-113
>prophage 37
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	409226	411329	1831911		Catovirus(100.0%)	1	NA	NA
AVS36454.1|409226_411329_-	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.8	1.6e-98
>prophage 38
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	441109	442252	1831911		Halovirus(50.0%)	2	NA	NA
AVS36493.1|441109_441493_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	R4T9S8	Halovirus	34.6	1.4e-05
AVS36494.1|441652_442252_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2K9L162	Tupanvirus	32.0	1.3e-08
>prophage 39
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	448215	453103	1831911		uncultured_Mediterranean_phage(33.33%)	3	NA	NA
AVS36498.1|448215_449538_+	chromosomal replication initiator protein DnaA	NA	A0A1B1INM7	uncultured_Mediterranean_phage	30.5	5.3e-07
AVS36499.1|449697_450765_+	DNA polymerase III subunit beta	NA	A0A0A8IL17	Aurantimonas_phage	21.4	1.1e-10
AVS36500.1|450793_453103_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	38.5	6.2e-128
>prophage 40
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	462301	463149	1831911		Emiliania_huxleyi_virus(50.0%)	2	NA	NA
AVS36506.1|462301_462877_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	37.7	8.4e-18
AVS36507.1|462909_463149_-	DUF655 domain-containing protein	NA	A0A1V0SDW0	Indivirus	42.5	2.3e-06
>prophage 41
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	467500	483912	1831911		Streptococcus_virus(12.5%)	13	NA	NA
AVS36511.1|467500_468175_+	7-cyano-7-deazaguanine synthase	NA	A0A1U9WRB5	Streptococcus_virus	36.0	5.2e-27
AVS36512.1|468195_469722_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
AVS36513.1|469733_469901_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AVS36514.1|470006_471785_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	35.1	2.6e-09
AVS36515.1|471774_472689_-	cytochrome B6	NA	NA	NA	NA	NA
AVS36516.1|472752_473631_-	FAA hydrolase family protein	NA	NA	NA	NA	NA
AVS36517.1|473743_474646_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.9	6.1e-07
AVS36518.1|474723_476052_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.1	1.6e-19
AVS36519.1|476067_478437_+	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4P767	Pseudomonas_phage	38.1	1.1e-143
AVS36520.1|478474_479860_-	sodium:dicarboxylate symporter	NA	NA	NA	NA	NA
AVS36521.1|479979_480603_-	thymidylate synthase (FAD)	NA	A0A1B0XW95	Campylobacter_phage	51.7	2.9e-48
AVS36522.1|480722_482354_+	CTP synthetase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.1	7.9e-146
AVS36523.1|482340_483912_+	single-stranded-DNA-specific exonuclease RecJ	NA	A0A0R6PDC6	Moraxella_phage	47.4	4.4e-53
>prophage 42
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	503870	505679	1831911		Tupanvirus(100.0%)	1	NA	NA
AVS36532.1|503870_505679_-	translational GTPase TypA	NA	A0A2K9L2P9	Tupanvirus	37.1	7.0e-26
>prophage 43
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	527848	528745	1831911		Citrobacter_phage(100.0%)	1	NA	NA
AVS36557.1|527848_528745_+	signal peptide peptidase SppA	NA	A0A0A0RQ86	Citrobacter_phage	32.6	5.3e-19
>prophage 44
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	536276	537074	1831911		Enterobacteria_phage(100.0%)	1	NA	NA
AVS36564.1|536276_537074_-	cytolethal distending toxin subunit B family protein	NA	A5LH53	Enterobacteria_phage	55.2	2.1e-75
>prophage 45
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	541918	542614	1831911		Sphenicid_alphaherpesvirus(100.0%)	1	NA	NA
AVS36570.1|541918_542614_-	uracil-DNA glycosylase	NA	A0A1R3T3N6	Sphenicid_alphaherpesvirus	44.4	6.5e-49
>prophage 46
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	552767	556754	1831911	tRNA	Streptococcus_phage(25.0%)	5	NA	NA
AVS36580.1|552767_553523_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	39.8	2.1e-37
AVS36581.1|553596_554514_+|tRNA	methionyl-tRNA formyltransferase	tRNA	M4QRX9	Synechococcus_phage	25.6	7.6e-05
AVS36582.1|554476_555130_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AVS36583.1|555126_555912_+	ParA family protein	NA	H7BUL8	unidentified_phage	32.5	8.8e-18
AVS36584.1|555917_556754_+	ParB/RepB/Spo0J family partition protein	NA	S5VSZ7	Leptospira_phage	30.3	2.8e-14
>prophage 47
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	569184	569946	1831911	tRNA	Escherichia_phage(100.0%)	1	NA	NA
AVS36601.1|569184_569946_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	32.5	2.4e-28
>prophage 48
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	583673	598573	1831911		Cafeteria_roenbergensis_virus(16.67%)	12	NA	NA
AVS36618.1|583673_586289_+	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	28.1	1.7e-28
AVS36619.1|586285_586648_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
AVS36620.1|586637_587060_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
AVS36621.1|587180_589127_+	AAA family ATPase	NA	K4I1H4	Acidithiobacillus_phage	41.4	1.6e-28
AVS36622.1|589119_590451_+	restriction endonuclease	NA	NA	NA	NA	NA
AVS36623.1|590439_591243_-	metal ABC transporter permease	NA	NA	NA	NA	NA
AVS36624.1|591235_592090_-	metal ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	5.4e-13
AVS36625.1|592102_592993_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVS36626.1|593213_595232_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	78.2	6.4e-12
AVS36627.1|595366_597148_+	transcriptional initiation protein Tat	NA	NA	NA	NA	NA
AVS36628.1|597185_598124_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	41.0	6.1e-58
AVS36629.1|598258_598573_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	48.9	1.5e-21
>prophage 49
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	603860	607778	1831911		Streptococcus_phage(50.0%)	7	NA	NA
AVS36636.1|603860_604685_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	35.3	1.3e-32
AVS36637.1|604687_604888_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
AVS36638.1|604966_605623_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AVS36639.1|605624_606032_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36640.1|606031_606457_-	cytochrome c	NA	NA	NA	NA	NA
AVS36641.1|606456_607038_-	6-carboxytetrahydropterin synthase	NA	NA	NA	NA	NA
AVS36642.1|607034_607778_-	7-carboxy-7-deazaguanine synthase QueE	NA	M1PXL8	Cellulophaga_phage	33.6	5.0e-23
>prophage 50
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	612937	615777	1831911		Bacillus_thuringiensis_phage(50.0%)	3	NA	NA
AVS36650.1|612937_613600_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	34.0	3.3e-26
AVS36651.1|613627_614833_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
AVS36652.1|614868_615777_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.0	2.7e-18
>prophage 51
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	626484	629238	1831911		Staphylococcus_phage(33.33%)	4	NA	NA
AVS36663.1|626484_627669_-	serine/threonine protein phosphatase	NA	Q4Z932	Staphylococcus_phage	32.2	4.8e-52
AVS36664.1|627678_627888_-	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
AVS36665.1|627880_628600_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	49.1	1.2e-45
AVS36666.1|628671_629238_-	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	41.0	8.3e-26
>prophage 52
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	632784	640681	1831911	protease	Synechococcus_phage(20.0%)	8	NA	NA
AVS36670.1|632784_633312_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.0	9.4e-16
AVS36671.1|633347_633932_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	59.8	6.0e-56
AVS36672.1|633931_635266_-	trigger factor	NA	NA	NA	NA	NA
AVS36673.1|635409_635982_+	GTP cyclohydrolase I FolE	NA	A0A0P0HSD2	Acinetobacter_phage	56.1	9.2e-49
AVS36674.1|635981_637367_+	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
AVS36675.1|637369_638707_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.2	2.5e-57
AVS36676.1|638708_639437_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
AVS36677.1|639499_640681_-	AAA family ATPase	NA	A0A127AWE7	Bacillus_phage	34.7	1.0e-49
>prophage 53
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	648063	651517	1831911	tRNA	Tupanvirus(33.33%)	3	NA	NA
AVS36685.1|648063_649872_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.5	4.5e-110
AVS36686.1|649868_650387_+	translation initiation factor IF-3	NA	K4F6Y6	Cronobacter_phage	28.6	3.1e-11
AVS36687.1|650425_651517_+	DNA modification methylase	NA	E5ERN5	Ostreococcus_lucimarinus_virus	39.2	5.2e-61
>prophage 54
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	657422	669888	1831911		uncultured_Mediterranean_phage(28.57%)	14	NA	NA
AVS36693.1|657422_658610_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	32.2	4.0e-38
AVS36694.1|658629_659259_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	36.5	6.8e-21
AVS36695.1|659347_659896_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
AVS36696.1|659864_661238_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	42.7	1.1e-95
AVS36697.1|661224_662247_-	ribonucleotide-diphosphate reductase subunit beta	NA	A2PYN0	Cyanophage	33.4	4.9e-45
AVS36698.1|662249_662672_-	RDD family protein	NA	NA	NA	NA	NA
AVS36699.1|662672_663281_-	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
AVS36700.1|663283_663847_-	ribosome recycling factor	NA	NA	NA	NA	NA
AVS36701.1|663856_664228_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AVS36702.1|664331_665027_-	BAX inhibitor (BI)-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	32.5	1.6e-15
AVS36703.1|665187_665823_+	carbonic anhydrase	NA	NA	NA	NA	NA
AVS36704.1|665819_667703_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AVS36705.1|667725_668697_-	iron-sulfur cluster assembly scaffold protein NifU	NA	A0A1B1IT19	uncultured_Mediterranean_phage	37.6	1.6e-13
AVS36706.1|668706_669888_-	cysteine desulfurase, NifS family	NA	H7BUW1	unidentified_phage	37.1	2.1e-31
>prophage 55
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	678960	679719	1831911		Cafeteria_roenbergensis_virus(100.0%)	1	NA	NA
AVS36719.1|678960_679719_-	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	34.5	1.3e-31
>prophage 56
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	687028	691399	1831911		uncultured_Caudovirales_phage(50.0%)	4	NA	NA
AVS36726.1|687028_689146_-	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	78.2	6.7e-12
AVS36727.1|689259_689769_-	DUF2393 domain-containing protein	NA	NA	NA	NA	NA
AVS36728.1|689768_690299_-	DUF2393 domain-containing protein	NA	NA	NA	NA	NA
AVS36729.1|690310_691399_-	hypothetical protein	NA	L7RCW8	Acanthamoeba_polyphaga_moumouvirus	23.0	9.1e-05
>prophage 57
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	695539	696793	1831911	protease	Bacillus_virus(100.0%)	1	NA	NA
AVS36736.1|695539_696793_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	54.5	4.5e-117
>prophage 58
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	704132	707928	1831911		Bacillus_thuringiensis_phage(100.0%)	3	NA	NA
AVS36743.1|704132_704654_-	chemotaxis protein CheW	NA	Q56AR1	Bacillus_thuringiensis_phage	24.8	1.9e-05
AVS36744.1|704658_706968_-	hybrid sensor histidine kinase/response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	26.0	1.3e-13
AVS36745.1|706971_707928_-	chemotaxis protein CheV	NA	Q56AR1	Bacillus_thuringiensis_phage	31.2	4.5e-40
>prophage 59
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	714735	728902	1831911	tRNA	Campylobacter_phage(14.29%)	16	NA	NA
AVS36750.1|714735_717198_-	site-specific DNA-methyltransferase	NA	A0A2R3ZYF2	Campylobacter_phage	30.0	2.1e-33
AVS36751.1|717555_718308_-	accessory colonization factor AcfC	NA	NA	NA	NA	NA
AVS36752.1|718449_718563_-	glycerol-3-phosphate transporter	NA	NA	NA	NA	NA
AVS36753.1|718571_719744_-	MFS transporter	NA	NA	NA	NA	NA
AVS36754.1|719998_720775_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	33.7	1.0e-34
AVS36755.1|720764_721418_+|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	A0A291ATS8	Pandoravirus	31.1	1.0e-11
AVS36756.1|721492_721873_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
AVS36757.1|721869_722718_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AVS36758.1|722728_723553_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	39.9	2.4e-50
AVS36759.1|723706_724597_-	molybdenum ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.2	2.3e-22
AVS36760.1|724606_725275_-	molybdate ABC transporter permease subunit	NA	Q6GZ02	Mycoplasma_phage	31.4	5.6e-05
AVS36761.1|725267_725669_-	molybdenum-pterin-binding protein	NA	NA	NA	NA	NA
AVS36762.1|725665_726415_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVS36763.1|726468_727155_-	malonyl-[acyl-carrier protein] O-methyltransferase BioC	NA	NA	NA	NA	NA
AVS36764.1|727151_727763_-	DUF452 domain-containing protein	NA	NA	NA	NA	NA
AVS36765.1|727759_728902_-	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	26.5	4.7e-28
>prophage 60
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	733822	737945	1831911		Bovine_gammaherpesvirus(50.0%)	4	NA	NA
AVS36773.1|733822_735031_+	diaminopimelate decarboxylase	NA	A0A060D2X4	Bovine_gammaherpesvirus	27.7	1.1e-22
AVS36774.1|735032_735800_+	HAD family hydrolase	NA	NA	NA	NA	NA
AVS36775.1|735787_736861_+	prephenate dehydratase	NA	NA	NA	NA	NA
AVS36776.1|736850_737945_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	26.4	5.7e-15
>prophage 61
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	745829	751319	1831911		Klosneuvirus(33.33%)	8	NA	NA
AVS36784.1|745829_746993_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SIT1	Klosneuvirus	33.6	8.1e-44
AVS36785.1|747002_748079_+	phosphoserine transaminase	NA	M1Q1P2	Streptococcus_phage	39.8	8.5e-72
AVS36786.1|748075_748426_+	RidA family protein	NA	NA	NA	NA	NA
AVS36787.1|748422_749397_-	3-oxoacyl-ACP synthase III	NA	NA	NA	NA	NA
AVS36788.1|749389_750376_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
AVS36789.1|750381_750528_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
AVS36790.1|750551_750905_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36791.1|750905_751319_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	42.6	2.6e-21
>prophage 62
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	755268	757908	1831911		Bacillus_phage(100.0%)	1	NA	NA
AVS36797.1|755268_757908_-	DNA polymerase I	NA	A0A142F1Q9	Bacillus_phage	29.0	2.0e-61
>prophage 63
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	762691	769633	1831911		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
AVS36803.1|762691_765514_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	49.8	3.0e-249
AVS36804.1|765586_766372_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AVS36805.1|766493_766583_+	hypothetical protein	NA	NA	NA	NA	NA
AVS36806.1|766784_768035_+	anthranilate synthase component I	NA	NA	NA	NA	NA
AVS36807.1|768031_769633_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	32.7	3.7e-39
>prophage 64
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	783980	787103	1831911		Leptospira_phage(100.0%)	1	NA	NA
AVS36826.1|783980_787103_-	multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	22.9	1.6e-65
>prophage 65
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	791402	797024	1831911		Ralstonia_phage(33.33%)	6	NA	NA
AVS36832.1|791402_792572_+	glutathionylspermidine synthase	NA	B2ZXR7	Ralstonia_phage	34.4	1.7e-41
AVS36833.1|792575_793511_+	D-2-hydroxyacid dehydrogenase	NA	M1NSB9	Streptococcus_phage	27.5	3.3e-19
AVS36834.1|793500_793992_+	YajQ family cyclic di-GMP-binding protein	NA	NA	NA	NA	NA
AVS36835.1|794000_794477_+	hypothetical protein	NA	NA	NA	NA	NA
AVS36836.1|794487_795312_+	hypothetical protein	NA	NA	NA	NA	NA
AVS36837.1|795311_797024_+	ATP-binding protein	NA	A0A0R6PCP6	Moraxella_phage	30.8	8.3e-21
>prophage 66
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	800525	801802	1831911		Staphylococcus_phage(50.0%)	2	NA	NA
AVS36843.1|800525_800990_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	45.3	2.7e-30
AVS36844.1|800986_801802_-	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.1	8.5e-48
>prophage 67
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	805664	806900	1831911	tRNA	uncultured_Mediterranean_phage(100.0%)	1	NA	NA
AVS36849.1|805664_806900_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	50.0	1.1e-86
>prophage 68
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	817101	819848	1831911	tRNA	Catovirus(50.0%)	2	NA	NA
AVS36861.1|817101_818607_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	37.2	5.7e-90
AVS36862.1|818603_819848_+	serine hydroxymethyltransferase	NA	A0A219YB23	Aeromonas_phage	51.7	4.1e-102
>prophage 69
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	824739	826731	1831911		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
AVS36869.1|824739_826731_+	fumarate reductase flavoprotein subunit	NA	M1HTN0	Paramecium_bursaria_Chlorella_virus	25.8	4.2e-16
>prophage 70
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	838998	843414	1831911		Vibrio_phage(33.33%)	6	NA	NA
AVS36881.1|838998_839226_+	superinfection immunity protein	NA	M4MA40	Vibrio_phage	44.3	2.2e-06
AVS36882.1|839234_839867_+	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA	NA
AVS36883.1|840425_842003_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	27.3	9.9e-53
AVS36884.1|841992_842328_+	hypothetical protein	NA	NA	NA	NA	NA
AVS36885.1|842402_842786_+	hypothetical protein	NA	NA	NA	NA	NA
AVS36886.1|842829_843414_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	36.1	1.1e-17
>prophage 71
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	855623	856367	1831911		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
AVS36893.1|855623_856367_+	3-oxoacyl-ACP reductase FabG	NA	A0A0N9R355	Chrysochromulina_ericina_virus	25.8	1.5e-11
>prophage 72
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	866911	870167	1831911		uncultured_Caudovirales_phage(50.0%)	5	NA	NA
AVS36903.1|866911_868009_-	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	43.6	5.3e-13
AVS36904.1|868018_868234_-	DUF465 domain-containing protein	NA	NA	NA	NA	NA
AVS36905.1|868418_868613_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
AVS36906.1|868752_869400_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AVS36907.1|869396_870167_+	3'-5' exonuclease	NA	A0A1X9I5C8	Streptococcus_phage	34.6	2.6e-14
>prophage 73
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	878263	880530	1831911		Mamastrovirus(50.0%)	2	NA	NA
AVS36917.1|878263_879310_+	dehypoxanthine futalosine cyclase	NA	A9ZMK9	Mamastrovirus	47.6	9.9e-25
AVS36918.1|879309_880530_+	insulinase family protein	NA	G3MBJ8	Bacillus_virus	20.7	4.6e-05
>prophage 74
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	884781	887374	1831911		Planktothrix_phage(50.0%)	2	NA	NA
AVS36924.1|884781_885519_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.2	1.3e-34
AVS36925.1|886174_887374_+	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	27.6	2.3e-33
>prophage 75
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	890758	899441	1831911		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
AVS36933.1|890758_894895_+	DNA-directed RNA polymerase subunit beta	NA	F2Y186	Organic_Lake_phycodnavirus	30.6	2.7e-25
AVS36934.1|894887_899441_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	26.2	4.4e-69
>prophage 76
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	909946	918306	1831911		Salmonella_phage(40.0%)	8	NA	NA
AVS36947.1|909946_912022_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	26.9	6.7e-65
AVS36948.1|913506_913677_-	DNA-binding protein	NA	NA	NA	NA	NA
AVS36949.1|913669_914212_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36950.1|914213_914882_-	phage antirepressor Ant	NA	A0A0M3LQ72	Mannheimia_phage	52.3	5.7e-26
AVS36951.1|915210_916098_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37819.1|916072_916396_-	hypothetical protein	NA	A0A0M4S6X1	Salmonella_phage	57.1	2.3e-12
AVS37820.1|916795_917023_-	XRE family transcriptional regulator	NA	M5A9C2	Nitratiruptor_phage	43.8	8.1e-09
AVS36952.1|917274_918306_-	(p)ppGpp synthetase	NA	A0A1B0VBT5	Salmonella_phage	28.7	1.0e-26
>prophage 77
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	922529	928895	1831911		Campylobacter_phage(50.0%)	12	NA	NA
AVS36960.1|922529_922754_-	XRE family transcriptional regulator	NA	M5A9C2	Nitratiruptor_phage	59.4	2.7e-12
AVS36961.1|922755_922971_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36962.1|923019_923874_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36963.1|923863_924607_-	DNA-binding protein	NA	X2KQ88	Campylobacter_phage	94.2	2.2e-119
AVS36964.1|924603_924786_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36965.1|924929_925127_+	hypothetical protein	NA	NA	NA	NA	NA
AVS36966.1|925268_925523_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36967.1|925513_925783_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36968.1|926346_926619_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36969.1|927190_927478_-	hypothetical protein	NA	NA	NA	NA	NA
AVS36970.1|927468_927984_-	DUF4065 domain-containing protein	NA	Q9AZG0	Lactococcus_phage	36.2	5.2e-19
AVS36971.1|928160_928895_-	phage repressor protein	NA	X2KRC9	Campylobacter_phage	45.6	1.5e-32
>prophage 78
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	932232	933525	1831911	terminase	Sinorhizobium_phage(100.0%)	1	NA	NA
AVS36978.1|932232_933525_+|terminase	terminase	terminase	A0A1Y0T3N1	Sinorhizobium_phage	29.9	1.0e-26
>prophage 79
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	942319	943354	1831911		Pseudomonas_phage(100.0%)	1	NA	NA
AVS36987.1|942319_943354_+	hypothetical protein	NA	A0A2I7SBK1	Pseudomonas_phage	30.9	1.2e-17
>prophage 80
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	946581	950810	1831911		Campylobacter_phage(100.0%)	7	NA	NA
AVS36990.1|946581_947031_+	hypothetical protein	NA	X2KQT3	Campylobacter_phage	100.0	3.0e-79
AVS36991.1|947043_947679_+	DUF4376 domain-containing protein	NA	X2KRD7	Campylobacter_phage	99.1	1.4e-95
AVS36992.1|947675_948059_+	hypothetical protein	NA	X2KX26	Campylobacter_phage	100.0	2.4e-61
AVS36993.1|948423_949707_+	hypothetical protein	NA	X2KRN1	Campylobacter_phage	100.0	1.3e-239
AVS36994.1|949755_950214_+	hypothetical protein	NA	X2KQY5	Campylobacter_phage	100.0	2.0e-83
AVS36995.1|950275_950695_+	hypothetical protein	NA	X2KX19	Campylobacter_phage	100.0	6.3e-55
AVS36996.1|950612_950810_+	hypothetical protein	NA	X2KPN2	Campylobacter_phage	96.9	3.7e-26
>prophage 81
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	955600	956377	1831911		Acinetobacter_phage(100.0%)	1	NA	NA
AVS37003.1|955600_956377_+	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	37.6	2.0e-38
>prophage 82
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	961220	972592	1831911	tRNA	Tupanvirus(40.0%)	8	NA	NA
AVS37008.1|961220_962294_-	DegT/DnrJ/EryC1/StrS aminotransferase family protein	NA	A0A2K9L0G1	Tupanvirus	31.3	5.2e-37
AVS37009.1|962408_964937_+|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L1X7	Tupanvirus	38.1	2.9e-78
AVS37010.1|964936_965488_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AVS37011.1|965484_967416_+	penicillin-binding protein 1A	NA	NA	NA	NA	NA
AVS37012.1|967443_970017_-	ATP-dependent chaperone ClpB	NA	K4FB40	Cronobacter_phage	34.4	6.0e-116
AVS37013.1|970128_970419_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37014.1|970545_971880_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	27.2	1.0e-21
AVS37015.1|971881_972592_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A127KMU1	Cyanophage	40.9	5.7e-40
>prophage 83
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	975795	977622	1831911		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
AVS37021.1|975795_977622_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	32.0	1.1e-84
>prophage 84
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	989979	991143	1831911		Tupanvirus(100.0%)	1	NA	NA
AVS37032.1|989979_991143_+	succinyl-CoA ligase subunit beta	NA	A0A2K9L5E9	Tupanvirus	24.6	2.6e-05
>prophage 85
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	998010	999720	1831911	tRNA	Orpheovirus(100.0%)	1	NA	NA
AVS37042.1|998010_999720_+|tRNA	proline--tRNA ligase	tRNA	A0A2I2L3K8	Orpheovirus	24.1	5.2e-07
>prophage 86
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1013023	1019276	1831911		Streptococcus_phage(33.33%)	4	NA	NA
AVS37056.1|1013023_1014256_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	40.4	5.9e-77
AVS37057.1|1014326_1015262_+	cbb3-type cytochrome oxidase assembly protein CcoS	NA	A0A2K9L162	Tupanvirus	28.2	9.2e-06
AVS37058.1|1016816_1017746_-	DUF2860 domain-containing protein	NA	NA	NA	NA	NA
AVS37059.1|1017899_1019276_+	replicative DNA helicase	NA	A0A077SK18	Escherichia_phage	36.2	2.5e-68
>prophage 87
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1025700	1032063	1831911	tRNA	Staphylococcus_phage(25.0%)	7	NA	NA
AVS37067.1|1025700_1026720_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	36.7	1.2e-59
AVS37068.1|1026731_1027175_+	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	34.0	7.7e-11
AVS37069.1|1027192_1028893_+	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	29.1	2.2e-53
AVS37070.1|1028889_1029354_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
AVS37071.1|1029350_1030316_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AVS37072.1|1030304_1031333_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AVS37073.1|1031325_1032063_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	32.9	1.4e-28
>prophage 88
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1037658	1045478	1831911		Pseudomonas_phage(25.0%)	10	NA	NA
AVS37081.1|1037658_1039602_+	NAD-dependent DNA ligase LigA	NA	A0A1Y0SVC9	Pseudomonas_phage	32.7	1.1e-85
AVS37823.1|1039582_1040587_+	hypothetical protein	NA	NA	NA	NA	NA
AVS37082.1|1040583_1041345_+	TlyA family RNA methyltransferase	NA	NA	NA	NA	NA
AVS37083.1|1041310_1042165_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
AVS37084.1|1042151_1042862_+	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	A0A0N9SHZ9	Staphylococcus_phage	31.7	1.5e-24
AVS37085.1|1042851_1043073_-	lipoprotein	NA	NA	NA	NA	NA
AVS37086.1|1043069_1043504_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37087.1|1043561_1044194_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
AVS37088.1|1044204_1044855_-	DNA/RNA non-specific endonuclease	NA	X2KR27	Campylobacter_phage	65.4	1.7e-75
AVS37089.1|1044851_1045478_-	endonuclease III	NA	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	28.5	7.7e-17
>prophage 89
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1057972	1059898	1831911		Planktothrix_phage(100.0%)	1	NA	NA
AVS37101.1|1057972_1059898_+	macrolide ABC transporter permease/ATP-binding protein MacB	NA	G9BWD6	Planktothrix_phage	40.7	2.6e-31
>prophage 90
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1063448	1069292	1831911		Pseudomonas_phage(33.33%)	6	NA	NA
AVS37105.1|1063448_1064825_-	MBOAT family protein	NA	A0A125RNP0	Pseudomonas_phage	35.1	6.2e-43
AVS37106.1|1064867_1065371_-	non-heme ferritin	NA	NA	NA	NA	NA
AVS37107.1|1065550_1066546_+	phosphate-binding protein	NA	A0A1B1IWY0	uncultured_Mediterranean_phage	43.1	3.0e-63
AVS37108.1|1066555_1067470_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AVS37109.1|1067466_1068555_+	phosphate ABC transporter permease PtsA	NA	NA	NA	NA	NA
AVS37110.1|1068551_1069292_+	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	5.4e-17
>prophage 91
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1084794	1086729	1831911		Lactococcus_phage(100.0%)	1	NA	NA
AVS37123.1|1084794_1086729_-	RNB domain-containing ribonuclease	NA	Q0GXV6	Lactococcus_phage	28.9	5.1e-35
>prophage 92
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1091681	1094536	1831911	tRNA	uncultured_Caudovirales_phage(50.0%)	3	NA	NA
AVS37129.1|1091681_1092200_-	inorganic pyrophosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	48.6	6.0e-39
AVS37130.1|1092209_1092788_-	adenylate kinase	NA	NA	NA	NA	NA
AVS37131.1|1092784_1094536_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	24.6	6.1e-11
>prophage 93
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1099166	1101566	1831911		Pasteurella_phage(33.33%)	3	NA	NA
AVS37136.1|1099166_1100285_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A218M4G6	Pasteurella_phage	34.1	1.6e-09
AVS37137.1|1100244_1101072_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	50.0	5.6e-23
AVS37138.1|1101077_1101566_+	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	NA	A0A140XBD6	Dickeya_phage	41.2	2.5e-15
>prophage 94
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1105525	1109506	1831911		Acinetobacter_phage(100.0%)	3	NA	NA
AVS37144.1|1105525_1107316_-	aminopeptidase P family protein	NA	A0A0P0I8D7	Acinetobacter_phage	47.6	1.6e-160
AVS37145.1|1107331_1108885_-	MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	47.5	1.6e-127
AVS37146.1|1109083_1109506_-	di-/tripeptide transporter	NA	A0A0P0IY73	Acinetobacter_phage	50.8	1.7e-28
>prophage 95
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1113207	1114527	1831911		Erwinia_phage(100.0%)	1	NA	NA
AVS37150.1|1113207_1114527_-	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	28.4	2.3e-39
>prophage 96
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1117538	1118267	1831911		Staphylococcus_phage(100.0%)	1	NA	NA
AVS37825.1|1117538_1118267_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.8	1.4e-25
>prophage 97
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1138755	1142508	1831911		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
AVS37167.1|1138755_1142508_-	restriction endonuclease	NA	A0A1B1IUC6	uncultured_Mediterranean_phage	24.2	8.1e-45
>prophage 98
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1153354	1154608	1831911		Phage_TP(100.0%)	1	NA	NA
AVS37178.1|1153354_1154608_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.1	1.4e-38
>prophage 99
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1159096	1159849	1831911		Bodo_saltans_virus(100.0%)	1	NA	NA
AVS37185.1|1159096_1159849_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	31.8	3.7e-05
>prophage 100
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1166076	1169679	1831911		Streptomyces_phage(100.0%)	1	NA	NA
AVS37195.1|1166076_1169679_+	DNA polymerase III subunit alpha	NA	A0A291AWR1	Streptomyces_phage	37.3	3.4e-197
>prophage 101
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1180409	1181399	1831911		Bacillus_virus(100.0%)	1	NA	NA
AVS37209.1|1180409_1181399_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.4	4.5e-35
>prophage 102
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1197510	1204767	1831911	transposase	Helicobacter_phage(33.33%)	6	NA	NA
AVS37215.1|1197510_1198065_+|transposase	transposase	transposase	A0A1S5RHD5	Helicobacter_phage	61.6	3.5e-53
AVS37216.1|1198156_1198840_-	energy transducer TonB	NA	NA	NA	NA	NA
AVS37217.1|1199164_1201255_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	27.4	4.9e-07
AVS37218.1|1201555_1202350_+	HrcA family transcriptional regulator	NA	NA	NA	NA	NA
AVS37219.1|1202346_1202874_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AVS37220.1|1202895_1204767_+	molecular chaperone DnaK	NA	A0A167RF67	Powai_lake_megavirus	46.8	8.8e-149
>prophage 103
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1210332	1212601	1831911	tRNA	Hokovirus(33.33%)	3	NA	NA
AVS37226.1|1210332_1211559_-|tRNA	histidine--tRNA ligase	tRNA	A0A1V0SFH3	Hokovirus	26.7	2.0e-24
AVS37227.1|1211555_1212134_-	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	34.3	3.1e-12
AVS37228.1|1212124_1212601_-	phosphopantetheine adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	39.5	5.5e-23
>prophage 104
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1217422	1224278	1831911	tRNA	Planktothrix_phage(33.33%)	4	NA	NA
AVS37235.1|1217422_1218433_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.3	2.1e-32
AVS37236.1|1218437_1221050_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	42.0	2.6e-151
AVS37237.1|1221072_1222119_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37238.1|1222247_1224278_+	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	27.8	2.0e-45
>prophage 105
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1232980	1236191	1831911	tRNA	Vibrio_phage(33.33%)	3	NA	NA
AVS37250.1|1232980_1234099_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A0U4J6Z1	Vibrio_phage	35.2	7.9e-20
AVS37251.1|1234095_1234920_+	formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	36.7	4.7e-14
AVS37252.1|1234916_1236191_-	aminotransferase class V-fold PLP-dependent enzyme	NA	A0A1C9C5E2	Heterosigma_akashiwo_virus	31.0	4.7e-37
>prophage 106
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1246985	1255882	1831911	tRNA	Terra1_virus(20.0%)	9	NA	NA
AVS37263.1|1246985_1248374_+|tRNA	cysteine--tRNA ligase	tRNA	F1C979	Terra1_virus	30.8	2.7e-46
AVS37264.1|1248366_1250109_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.5	7.3e-57
AVS37265.1|1250140_1251199_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AVS37266.1|1251195_1252446_+	insulinase family protein	NA	A0A2L2DIR8	Acanthamoeba_polyphaga_mimivirus	25.5	3.9e-28
AVS37267.1|1252438_1253335_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
AVS37268.1|1253334_1254114_+	enoyl-ACP reductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	25.3	2.0e-06
AVS37269.1|1254154_1254460_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37270.1|1254471_1255068_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AVS37271.1|1255141_1255882_+	NAD(+) synthetase	NA	A0A0K0KVL1	Prochlorococcus_phage	32.6	2.6e-19
>prophage 107
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1262096	1271559	1831911	tRNA	Chrysochromulina_ericina_virus(20.0%)	11	NA	NA
AVS37277.1|1262096_1263386_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7P8	Chrysochromulina_ericina_virus	35.6	6.7e-31
AVS37278.1|1263382_1264537_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9J5A8	Fowlpox_virus	33.5	5.6e-13
AVS37279.1|1264533_1265151_+	hypothetical protein	NA	NA	NA	NA	NA
AVS37280.1|1265154_1265823_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	37.2	3.5e-15
AVS37281.1|1265819_1266596_+	prepilin peptidase	NA	NA	NA	NA	NA
AVS37282.1|1266595_1267621_+	LptF/LptG family permease	NA	NA	NA	NA	NA
AVS37283.1|1267617_1268343_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AVS37284.1|1268339_1269551_-	threonine ammonia-lyase	NA	A0A1W6JHY1	Lactococcus_phage	27.9	2.3e-09
AVS37285.1|1269550_1269964_-	CoA-binding protein	NA	NA	NA	NA	NA
AVS37286.1|1270082_1270499_+	hypothetical protein	NA	NA	NA	NA	NA
AVS37287.1|1270485_1271559_-|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	tRNA	A0A2K5B251	Erysipelothrix_phage	29.6	1.2e-12
>prophage 108
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1277930	1282248	1831911	tRNA	Hokovirus(66.67%)	5	NA	NA
AVS37292.1|1277930_1278383_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A1S5V092	Saudi_moumouvirus	41.4	4.1e-20
AVS37293.1|1278374_1279316_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37294.1|1279319_1281206_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	33.0	9.0e-85
AVS37295.1|1281215_1281413_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37296.1|1281405_1282248_-	fructose 1,6-bisphosphatase	NA	A0A1V0SEY8	Hokovirus	36.1	3.7e-30
>prophage 109
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1294483	1295332	1831911		Enterococcus_phage(100.0%)	1	NA	NA
AVS37311.1|1294483_1295332_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	37.2	7.0e-37
>prophage 110
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1299245	1302647	1831911	integrase	Acinetobacter_phage(50.0%)	3	1297204:1297220	1310222:1310238
1297204:1297220	attL	AAGCATAGCCATCAAGA	NA	NA	NA	NA
AVS37316.1|1299245_1299812_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	35.9	6.8e-28
AVS37317.1|1299808_1301593_-	bifunctional aminodeoxychorismate synthase component I/aminotransferase	NA	NA	NA	NA	NA
AVS37318.1|1301582_1302647_-|integrase	integrase	integrase	A0A1S6L016	Salmonella_phage	29.9	3.1e-10
1310222:1310238	attR	AAGCATAGCCATCAAGA	NA	NA	NA	NA
>prophage 111
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1313379	1324411	1831911		Mycobacterium_phage(33.33%)	6	NA	NA
AVS37331.1|1313379_1316220_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.6	2.8e-82
AVS37332.1|1316328_1318581_-	flagellin	NA	NA	NA	NA	NA
AVS37333.1|1318960_1320892_-	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	29.6	1.1e-45
AVS37334.1|1320895_1322185_-	sensor histidine kinase	NA	NA	NA	NA	NA
AVS37335.1|1322178_1322841_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AVS37336.1|1322827_1324411_-	phosphoglycerate dehydrogenase	NA	A0A1M7XU89	Cedratvirus	30.2	4.7e-34
>prophage 112
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1331121	1337974	1831911	tRNA	Orpheovirus(33.33%)	9	NA	NA
AVS37342.1|1331121_1332114_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.1	1.9e-33
AVS37343.1|1332236_1332602_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
AVS37344.1|1332631_1333201_-	DJ-1 family protein	NA	NA	NA	NA	NA
AVS37345.1|1333193_1333373_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37346.1|1333455_1334199_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AVS37347.1|1334191_1334920_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	4.2e-30
AVS37348.1|1334947_1336414_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
AVS37349.1|1336517_1336985_-|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
AVS37350.1|1336987_1337974_-	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	23.6	3.3e-14
>prophage 113
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1341101	1342424	1831911		Lactococcus_phage(50.0%)	2	NA	NA
AVS37355.1|1341101_1342001_-	cysteine synthase A	NA	C3U2M1	Lactococcus_phage	49.7	1.1e-67
AVS37356.1|1342127_1342424_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	53.9	1.8e-16
>prophage 114
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1347328	1360445	1831911		Hokovirus(20.0%)	15	NA	NA
AVS37361.1|1347328_1348258_-	ribose-phosphate pyrophosphokinase	NA	A0A1V0SHF7	Hokovirus	37.2	1.9e-48
AVS37362.1|1348365_1349025_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AVS37363.1|1349035_1349788_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AVS37364.1|1349789_1350569_-	adhesin	NA	NA	NA	NA	NA
AVS37365.1|1350590_1351319_-	polar amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.2	1.3e-31
AVS37366.1|1351454_1352243_-	chemotaxis protein methyltransferase	NA	NA	NA	NA	NA
AVS37367.1|1352258_1352813_-	chemotaxis protein CheB	NA	NA	NA	NA	NA
AVS37368.1|1352979_1353417_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA	NA
AVS37369.1|1353416_1353749_+	hypothetical protein	NA	NA	NA	NA	NA
AVS37370.1|1353745_1354294_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	38.3	8.0e-26
AVS37371.1|1354312_1354909_+	DedA family protein	NA	NA	NA	NA	NA
AVS37372.1|1354905_1356357_+	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	35.3	3.1e-45
AVS37373.1|1356353_1357457_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
AVS37374.1|1357478_1358861_-	argininosuccinate lyase	NA	NA	NA	NA	NA
AVS37375.1|1358870_1360445_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	54.0	7.9e-151
>prophage 115
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1377469	1389668	1831911		Vibrio_phage(20.0%)	11	NA	NA
AVS37388.1|1377469_1378813_-	helicase	NA	A0A2I7R7D8	Vibrio_phage	33.7	7.2e-44
AVS37389.1|1378861_1380208_+	hypothetical protein	NA	NA	NA	NA	NA
AVS37390.1|1380219_1381092_-	carbon-nitrogen hydrolase	NA	M1I5Z5	Acanthocystis_turfacea_Chlorella_virus	37.3	1.1e-48
AVS37391.1|1381088_1381976_-	cation transporter	NA	NA	NA	NA	NA
AVS37392.1|1381972_1382950_-	agamatine deiminase	NA	A7IVE6	Paramecium_bursaria_Chlorella_virus	28.4	1.5e-35
AVS37393.1|1383048_1383483_-	META domain-containing protein	NA	NA	NA	NA	NA
AVS37394.1|1383492_1384167_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
AVS37395.1|1384623_1385085_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37396.1|1385179_1386712_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	E3SNU8	Prochlorococcus_phage	49.7	1.5e-42
AVS37397.1|1386714_1387485_-	molecular chaperone DjlA	NA	NA	NA	NA	NA
AVS37398.1|1387481_1389668_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.4	3.2e-150
>prophage 116
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1406156	1406684	1831911		Bacillus_phage(100.0%)	1	NA	NA
AVS37412.1|1406156_1406684_-	thermonuclease family protein	NA	O64020	Bacillus_phage	24.4	1.4e-06
>prophage 117
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1418971	1421490	1831911		Paramecium_bursaria_Chlorella_virus(50.0%)	3	NA	NA
AVS37427.1|1418971_1419892_-	ornithine carbamoyltransferase	NA	M1I6M4	Paramecium_bursaria_Chlorella_virus	30.0	1.1e-19
AVS37428.1|1419888_1420872_-	porphobilinogen synthase	NA	NA	NA	NA	NA
AVS37429.1|1420929_1421490_+	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	45.0	5.3e-41
>prophage 118
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1424910	1438086	1831911	tRNA	Vibrio_phage(20.0%)	12	NA	NA
AVS37434.1|1424910_1426779_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.5	7.4e-39
AVS37435.1|1426794_1427307_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
AVS37436.1|1427303_1427822_-	DUF1751 domain-containing protein	NA	NA	NA	NA	NA
AVS37437.1|1427920_1428337_+	hypothetical protein	NA	NA	NA	NA	NA
AVS37438.1|1428345_1429962_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	R4TQL5	Phaeocystis_globosa_virus	43.9	1.4e-70
AVS37439.1|1429965_1431216_-|tRNA	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	tRNA	NA	NA	NA	NA
AVS37440.1|1431212_1432784_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37441.1|1432780_1433836_-	3-dehydroquinate synthase	NA	A0A0P0C619	Ostreococcus_mediterraneus_virus	35.0	5.7e-28
AVS37442.1|1433881_1435282_-	potassium transporter TrkA	NA	NA	NA	NA	NA
AVS37443.1|1435311_1436433_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	38.8	2.9e-70
AVS37444.1|1436434_1437202_+	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
AVS37445.1|1437564_1438086_+	DUF4102 domain-containing protein	NA	K7PGY1	Enterobacteria_phage	31.4	9.7e-05
>prophage 119
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1488962	1489547	1831911		Acinetobacter_phage(100.0%)	1	NA	NA
AVS37481.1|1488962_1489547_+	lysozyme	NA	A0A068CDE9	Acinetobacter_phage	37.4	2.6e-14
>prophage 120
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1545747	1547200	1831911		Staphylococcus_phage(50.0%)	2	NA	NA
AVS37521.1|1545747_1546443_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.9	5.4e-11
AVS37522.1|1546429_1547200_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.3	3.9e-10
>prophage 121
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1556040	1566917	1831911		Bacillus_virus(33.33%)	7	NA	NA
AVS37534.1|1556040_1558629_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	NA	G3M9Z5	Bacillus_virus	31.9	5.7e-98
AVS37535.1|1558669_1559245_-	ComF family protein	NA	NA	NA	NA	NA
AVS37536.1|1559241_1559886_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37537.1|1559962_1561759_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.5	7.1e-23
AVS37538.1|1561885_1563160_+	TolC family protein	NA	NA	NA	NA	NA
AVS37539.1|1563156_1563897_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AVS37540.1|1563899_1566917_+	AcrB/AcrD/AcrF family protein	NA	S5VTK5	Leptospira_phage	24.5	3.9e-66
>prophage 122
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1577958	1581354	1831911		Klosneuvirus(50.0%)	5	NA	NA
AVS37552.1|1577958_1578762_-	thiamine biosynthesis protein ThiF	NA	A0A1V0SIK8	Klosneuvirus	32.4	4.0e-10
AVS37553.1|1578758_1578950_-	thiamine biosynthesis protein ThiS	NA	NA	NA	NA	NA
AVS37554.1|1578959_1580057_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AVS37555.1|1580060_1580660_-	lysine transporter LysE	NA	NA	NA	NA	NA
AVS37556.1|1580652_1581354_-	NAD-dependent deacetylase	NA	A0A023MHA7	Escherichia_phage	40.4	6.6e-33
>prophage 123
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1592328	1599198	1831911	tRNA	Klosneuvirus(33.33%)	5	NA	NA
AVS37563.1|1592328_1593786_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.7	1.2e-97
AVS37564.1|1593795_1595157_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
AVS37565.1|1595153_1595264_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37566.1|1595257_1598011_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2P1ELB8	Moumouvirus	24.7	1.5e-67
AVS37567.1|1598109_1599198_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	34.6	2.7e-09
>prophage 124
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1603909	1607167	1831911		Escherichia_phage(50.0%)	3	NA	NA
AVS37575.1|1603909_1604461_+	single-stranded DNA-binding protein	NA	D5LH30	Escherichia_phage	42.7	4.9e-15
AVS37576.1|1604471_1604732_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
AVS37577.1|1604791_1607167_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	37.9	4.5e-134
>prophage 125
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1617267	1618170	1831911		Rhodococcus_phage(100.0%)	1	NA	NA
AVS37590.1|1617267_1618170_-	M23 family peptidase	NA	A0A2D0ZM66	Rhodococcus_phage	46.4	3.5e-18
>prophage 126
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1621196	1642882	1831911	tRNA,protease	Staphylococcus_phage(27.27%)	20	NA	NA
AVS37594.1|1621196_1623626_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	40.0	4.8e-155
AVS37595.1|1623635_1624607_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	46.5	4.8e-50
AVS37596.1|1624606_1626187_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
AVS37597.1|1626179_1626452_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.0	5.7e-09
AVS37598.1|1626424_1627750_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
AVS37599.1|1627986_1629183_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	40.8	1.1e-67
AVS37600.1|1629322_1630546_+	serine/threonine transporter SstT	NA	NA	NA	NA	NA
AVS37601.1|1630555_1631443_+	aspartate carbamoyltransferase	NA	Q84489	Paramecium_bursaria_Chlorella_virus	33.0	1.6e-28
AVS37602.1|1631446_1633168_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	20.7	2.0e-14
AVS37603.1|1633161_1633599_+	hypothetical protein	NA	NA	NA	NA	NA
AVS37604.1|1633595_1635671_+	ATP-dependent DNA helicase	NA	A7KV33	Bacillus_phage	35.9	8.9e-94
AVS37605.1|1635667_1636486_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
AVS37606.1|1636479_1636707_+	carbon storage regulator	NA	NA	NA	NA	NA
AVS37607.1|1636703_1637471_+	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
AVS37608.1|1637467_1637920_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	40.3	2.1e-19
AVS37609.1|1637930_1638533_+	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
AVS37610.1|1638532_1638823_+|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A218MMY6	uncultured_virus	50.6	2.8e-14
AVS37611.1|1638819_1640949_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	K4FB40	Cronobacter_phage	44.8	1.2e-130
AVS37612.1|1640923_1641571_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
AVS37613.1|1641592_1642882_-	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.2	6.9e-12
>prophage 127
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1646192	1652172	1831911		Bathycoccus_sp._RCC1105_virus(33.33%)	5	NA	NA
AVS37618.1|1646192_1648130_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQU5	Bathycoccus_sp._RCC1105_virus	45.3	5.8e-103
AVS37619.1|1648133_1648979_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
AVS37620.1|1649001_1649394_-	two-component system response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	33.6	4.9e-09
AVS37621.1|1649506_1650400_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37622.1|1650399_1652172_-	UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase	NA	L7Y3T9	Megavirus	28.7	3.4e-25
>prophage 128
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1660972	1663647	1831911		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
AVS37630.1|1660972_1662667_-	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.2	9.1e-28
AVS37631.1|1662660_1663647_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	36.0	2.1e-53
>prophage 129
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1672689	1688895	1831911		uncultured_virus(37.5%)	17	NA	NA
AVS37640.1|1672689_1673838_-	FkbM family methyltransferase	NA	A0A0A0V284	uncultured_virus	32.9	1.6e-07
AVS37641.1|1673900_1674716_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AVS37642.1|1674774_1675734_+	lipopolysaccharide heptosyltransferase II	NA	NA	NA	NA	NA
AVS37643.1|1675714_1676275_-	phosphoheptose isomerase	NA	A0A067XQR2	Caulobacter_phage	37.4	9.0e-17
AVS37644.1|1676271_1677657_-	bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase	NA	A0A0K0KVL9	Prochlorococcus_phage	45.4	2.5e-23
AVS37645.1|1677649_1678603_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SL51	Synechococcus_phage	34.8	4.9e-23
AVS37646.1|1678603_1679131_-	HAD family hydrolase	NA	NA	NA	NA	NA
AVS37647.1|1679245_1679548_+	cytochrome C	NA	NA	NA	NA	NA
AVS37648.1|1679570_1679777_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
AVS37649.1|1679773_1682131_-	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	28.5	1.8e-66
AVS37650.1|1682239_1683538_+	transcription termination factor Rho	NA	NA	NA	NA	NA
AVS37651.1|1683541_1685071_+	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	37.6	1.5e-45
AVS37652.1|1685067_1685397_-	DUF2165 domain-containing protein	NA	NA	NA	NA	NA
AVS37653.1|1685410_1685590_-	DUF2165 domain-containing protein	NA	NA	NA	NA	NA
AVS37654.1|1685661_1687761_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	28.9	2.6e-56
AVS37655.1|1687760_1687955_-	heavy metal transport/detoxification protein	NA	NA	NA	NA	NA
AVS37656.1|1687944_1688895_-	cation transporter	NA	A0A1V0SED0	Indivirus	31.4	3.2e-06
>prophage 130
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1694063	1704719	1831911	tRNA	Catovirus(20.0%)	13	NA	NA
AVS37664.1|1694063_1694546_-	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	42.9	6.6e-16
AVS37665.1|1694555_1695263_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AVS37666.1|1695371_1695713_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AVS37667.1|1695712_1696021_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AVS37668.1|1696038_1697631_-|tRNA	arginine--tRNA ligase	tRNA	L7RDT2	Acanthamoeba_polyphaga_moumouvirus	23.6	4.1e-06
AVS37669.1|1697642_1697882_-	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
AVS37670.1|1697883_1698507_-	guanylate kinase	NA	A0A223FN12	Murmansk_poxvirus	32.9	5.7e-20
AVS37671.1|1698503_1700117_-	highly acidic protein	NA	NA	NA	NA	NA
AVS37672.1|1700173_1700941_-	flagellar type III secretion system protein FliR	NA	NA	NA	NA	NA
AVS37673.1|1700927_1701563_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.3	9.9e-20
AVS37674.1|1701575_1702649_-	elongation factor Ts	NA	NA	NA	NA	NA
AVS37675.1|1702648_1703440_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
AVS37676.1|1703555_1704719_-	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	37.2	1.9e-53
>prophage 131
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1707813	1717672	1831911	tRNA	Salmonella_phage(40.0%)	8	NA	NA
AVS37680.1|1707813_1709100_-	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	36.7	3.8e-58
AVS37681.1|1709100_1710960_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AVS37682.1|1711047_1711545_-	histidine kinase	NA	A0A1B0V854	Salmonella_phage	41.6	1.8e-21
AVS37683.1|1711562_1712942_-	hypothetical protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	55.6	5.9e-17
AVS37684.1|1713061_1713556_-	histidine kinase	NA	A0A1B0V854	Salmonella_phage	38.5	2.1e-17
AVS37685.1|1713824_1715201_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AVS37686.1|1715197_1716004_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AVS37687.1|1716145_1717672_+	phosphate permease	NA	M4QMY4	Ostreococcus_lucimarinus_virus	27.3	6.7e-38
>prophage 132
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1729304	1730171	1831911		uncultured_phage(100.0%)	1	NA	NA
AVS37699.1|1729304_1730171_-	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	36.5	5.0e-14
>prophage 133
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1737721	1753022	1831911	protease	uncultured_virus(20.0%)	16	NA	NA
AVS37708.1|1737721_1738882_+	M23 family peptidase	NA	A8ATH6	Listeria_phage	45.5	1.3e-20
AVS37709.1|1738878_1739082_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37710.1|1739083_1739764_-	polyphenol oxidase	NA	NA	NA	NA	NA
AVS37711.1|1739727_1740339_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	30.8	2.1e-22
AVS37712.1|1740347_1742888_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37713.1|1743049_1743310_+	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	50.0	5.1e-15
AVS37714.1|1743330_1744968_+	molecular chaperone GroEL	NA	A0A240F779	uncultured_virus	60.8	6.9e-166
AVS37715.1|1745010_1746204_-	sensor histidine kinase	NA	B5LWN0	Feldmannia_species_virus	28.1	5.1e-09
AVS37716.1|1746196_1746862_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	33.8	1.2e-23
AVS37717.1|1747009_1747609_+	hemerythrin family non-heme iron protein	NA	NA	NA	NA	NA
AVS37718.1|1747619_1747868_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
AVS37719.1|1748126_1749374_-	sensor histidine kinase	NA	NA	NA	NA	NA
AVS37720.1|1749370_1750045_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	32.9	1.1e-27
AVS37721.1|1750120_1751539_-|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	33.9	7.9e-33
AVS37722.1|1751738_1752632_+	DnaJ family protein	NA	A0A1V0SF83	Hokovirus	30.8	1.1e-19
AVS37723.1|1752647_1753022_+	MerR family transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	42.5	2.4e-05
>prophage 134
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1757659	1758481	1831911		Lactococcus_phage(100.0%)	1	NA	NA
AVS37728.1|1757659_1758481_+	M23 family peptidase	NA	A0A1P8BMJ0	Lactococcus_phage	40.0	4.3e-15
>prophage 135
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1770325	1771861	1831911		Hokovirus(100.0%)	1	NA	NA
AVS37741.1|1770325_1771861_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	29.1	3.2e-16
>prophage 136
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1784151	1786101	1831911		Catovirus(50.0%)	2	NA	NA
AVS37751.1|1784151_1785273_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	29.9	7.1e-29
AVS37752.1|1785429_1786101_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	33.5	3.4e-26
>prophage 137
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1793952	1804070	1831911	tRNA	uncultured_Caudovirales_phage(25.0%)	9	NA	NA
AVS37760.1|1793952_1795932_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	33.6	1.2e-18
AVS37761.1|1795931_1797023_-	nitronate monooxygenase	NA	NA	NA	NA	NA
AVS37762.1|1797019_1798225_-|tRNA	tyrosine--tRNA ligase	tRNA	A0A1S6UA79	Serratia_phage	29.6	1.1e-27
AVS37763.1|1798236_1800432_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	44.0	1.4e-07
AVS37764.1|1800415_1800640_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AVS37765.1|1800650_1801370_-	UMP kinase	NA	NA	NA	NA	NA
AVS37766.1|1801421_1802615_-	peptidase M23	NA	NA	NA	NA	NA
AVS37767.1|1802611_1803418_-	ABC transporter permease	NA	NA	NA	NA	NA
AVS37768.1|1803404_1804070_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.8	2.8e-17
>prophage 138
CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1831911	1808982	1831400	1831911	tail,integrase,capsid,head	Campylobacter_phage(100.0%)	38	1806646:1806663	1823214:1823231
1806646:1806663	attL	ATAAAATACAAAAAATAA	NA	NA	NA	NA
AVS37773.1|1808982_1810158_+|integrase	site-specific integrase	integrase	X2KXI6	Campylobacter_phage	100.0	1.7e-222
AVS37774.1|1810154_1810361_-	DNA-binding protein	NA	X2KXB9	Campylobacter_phage	100.0	4.8e-32
AVS37775.1|1810362_1810716_-	hypothetical protein	NA	X2KRB4	Campylobacter_phage	100.0	2.1e-56
AVS37776.1|1810733_1811489_-	site-specific DNA-methyltransferase	NA	X2KR14	Campylobacter_phage	100.0	9.6e-147
AVS37777.1|1811466_1811733_-	hypothetical protein	NA	X2KLR9	Campylobacter_phage	98.9	1.4e-39
AVS37778.1|1811716_1812088_-	hypothetical protein	NA	X2KQ09	Campylobacter_phage	100.0	1.2e-60
AVS37779.1|1812088_1812313_-	hypothetical protein	NA	X2KM06	Campylobacter_phage	100.0	1.8e-37
AVS37780.1|1812321_1813083_-	hypothetical protein	NA	X2KQ81	Campylobacter_phage	100.0	1.4e-124
AVS37781.1|1813019_1813334_-	hypothetical protein	NA	X2KR17	Campylobacter_phage	100.0	1.6e-50
AVS37782.1|1813412_1813733_-	hypothetical protein	NA	X2KLS2	Campylobacter_phage	100.0	1.4e-51
AVS37783.1|1814120_1814357_-	transcriptional regulator	NA	X2KXC5	Campylobacter_phage	100.0	8.1e-36
AVS37784.1|1814370_1815138_-	RloG protein	NA	X2KRC2	Campylobacter_phage	100.0	3.7e-138
AVS37785.1|1815275_1815506_-	hypothetical protein	NA	X2KLS5	Campylobacter_phage	100.0	5.0e-38
AVS37786.1|1815471_1815735_-	hypothetical protein	NA	X2KQ17	Campylobacter_phage	100.0	4.1e-44
AVS37787.1|1815791_1816079_-	hypothetical protein	NA	X2KXC8	Campylobacter_phage	100.0	2.4e-50
AVS37788.1|1816131_1816863_-	DNA-binding protein	NA	X2KQ88	Campylobacter_phage	100.0	9.7e-128
AVS37789.1|1817292_1817577_-	hypothetical protein	NA	X2KRM3	Campylobacter_phage	97.9	1.1e-39
AVS37790.1|1817573_1817777_-	hypothetical protein	NA	X2KQ19	Campylobacter_phage	97.0	9.1e-28
AVS37791.1|1817991_1818375_+	Cro/Cl family transcriptional regulator	NA	X2KPM6	Campylobacter_phage	100.0	1.0e-43
AVS37792.1|1818378_1818696_+	hypothetical protein	NA	X2KX12	Campylobacter_phage	100.0	2.5e-48
AVS37793.1|1818697_1819678_+	DNA polymerase III subunit epsilon	NA	X2KQX9	Campylobacter_phage	100.0	2.5e-187
AVS37794.1|1819687_1820308_+	hypothetical protein	NA	X2KQS5	Campylobacter_phage	100.0	6.1e-107
AVS37795.1|1820309_1822088_+	NTPase KAP	NA	X2KLG0	Campylobacter_phage	100.0	0.0e+00
AVS37796.1|1822142_1822340_-	hypothetical protein	NA	X2KPN2	Campylobacter_phage	100.0	1.5e-27
AVS37797.1|1822257_1822677_-	hypothetical protein	NA	X2KX19	Campylobacter_phage	100.0	6.3e-55
AVS37798.1|1822738_1823197_-	hypothetical protein	NA	X2KQY5	Campylobacter_phage	100.0	2.0e-83
AVS37799.1|1823245_1824529_-	hypothetical protein	NA	X2KRN1	Campylobacter_phage	98.6	1.1e-235
1823214:1823231	attR	TTATTTTTTGTATTTTAT	NA	NA	NA	NA
AVS37800.1|1824525_1824897_-	hypothetical protein	NA	X2KRC3	Campylobacter_phage	92.7	5.5e-63
AVS37801.1|1824886_1825351_-	hypothetical protein	NA	X2KM25	Campylobacter_phage	100.0	5.1e-74
AVS37802.1|1825347_1825983_-	DUF4376 domain-containing protein	NA	X2KRD7	Campylobacter_phage	99.1	1.4e-95
AVS37803.1|1825995_1826445_-	hypothetical protein	NA	X2KQT3	Campylobacter_phage	100.0	3.0e-79
AVS37804.1|1826446_1828012_-	hypothetical protein	NA	X2KRN6	Campylobacter_phage	99.8	5.5e-205
AVS37805.1|1828004_1828637_-	hypothetical protein	NA	X2KRC7	Campylobacter_phage	100.0	7.9e-110
AVS37806.1|1828633_1828951_-|head,tail	head-tail adaptor protein	head,tail	X2KXD7	Campylobacter_phage	100.0	9.2e-51
AVS37807.1|1828963_1829401_-|head,tail	phage gp6-like head-tail connector protein	head,tail	X2KR38	Campylobacter_phage	100.0	1.8e-76
AVS37808.1|1829397_1829649_-	hypothetical protein	NA	X2KLU2	Campylobacter_phage	100.0	3.7e-18
AVS37809.1|1829659_1830826_-|capsid	phage major capsid protein	capsid	X2KQ31	Campylobacter_phage	100.0	2.8e-214
AVS37810.1|1830842_1831400_-	peptidase	NA	X2KXE1	Campylobacter_phage	100.0	1.1e-96
>prophage 1
CP028186	Campylobacter jejuni strain CFSAN054107 plasmid pGMI16-002, complete sequence	66602	17357	28731	66602	transposase	Streptococcus_phage(57.14%)	10	NA	NA
AVS37857.1|17357_17963_+	hypothetical protein	NA	E4ZFP8	Streptococcus_phage	100.0	2.6e-94
AVS37858.1|17959_18502_+	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	98.9	2.2e-92
AVS37859.1|18594_19389_+	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
AVS37860.1|19496_19685_-	hypothetical protein	NA	NA	NA	NA	NA
AVS37861.1|19679_20153_+|transposase	IS200/IS605 family transposase	transposase	A0A286QN76	Streptococcus_phage	62.9	1.4e-42
AVS37862.1|20139_21378_+|transposase	transposase	transposase	A0A1S5RHD5	Helicobacter_phage	52.6	3.6e-90
AVS37863.1|21731_21998_+	hypothetical protein	NA	A0A2R3ZY63	Campylobacter_phage	90.4	6.8e-39
AVS37864.1|22056_22617_+	hypothetical protein	NA	NA	NA	NA	NA
AVS37865.1|22619_22886_+	hypothetical protein	NA	NA	NA	NA	NA
AVS37866.1|22932_28731_+	helicase	NA	A0A248SL14	Klebsiella_phage	38.8	5.3e-285
