The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025286	Ethanoligenens harbinense YUAN-3 chromosome, complete genome	3009515	85223	106567	3009515	tail,transposase,terminase,capsid	Faecalibacterium_phage(53.85%)	29	NA	NA
AVQ94841.1|85223_87176_+|transposase	transposase	transposase	A0A0N7ACC7	Bacillus_phage	36.7	9.6e-106
AVQ94842.1|87191_88142_+	ATP-binding protein	NA	A0A0N7ACA6	Bacillus_phage	33.9	2.0e-40
AVQ94843.1|88158_88344_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ94844.1|88350_88827_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ94845.1|88819_89128_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ94846.1|89229_89670_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ94847.1|89671_89944_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
AVQ94848.1|89930_90596_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ94849.1|90626_91127_+	regulatory protein GemA	NA	NA	NA	NA	NA
AVQ94850.1|91123_91447_+	DNA-binding protein	NA	A0A2K9VGU3	Faecalibacterium_phage	39.1	4.7e-10
AVQ94851.1|91617_91956_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ94852.1|91948_92275_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ94853.1|92296_92869_+	DUF3486 domain-containing protein	NA	NA	NA	NA	NA
AVQ94854.1|92865_93360_+	antitermination protein NusG	NA	NA	NA	NA	NA
AVQ94855.1|93591_95043_+|terminase	terminase	terminase	A0A090EUA8	Clostridium_phage	61.2	4.1e-162
AVQ97291.1|95060_96488_+|capsid	capsid protein	capsid	A0A2K9V3H9	Faecalibacterium_phage	52.0	2.1e-134
AVQ94856.1|96474_98142_+|capsid	capsid protein	capsid	A0A2K9V3K1	Faecalibacterium_phage	39.5	6.8e-68
AVQ94857.1|98154_98376_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ94858.1|98540_99080_+	hypothetical protein	NA	A0A2K9V3G1	Faecalibacterium_phage	46.1	6.6e-33
AVQ94859.1|99092_100268_+|capsid	phage major capsid protein	capsid	A0A2K9V3F8	Faecalibacterium_phage	62.5	1.5e-106
AVQ94860.1|100281_100653_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ94861.1|100649_101072_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ94862.1|101076_101490_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ94863.1|101489_101915_+	hypothetical protein	NA	A0A1J1J8Y6	Escherichia_phage	41.3	1.3e-28
AVQ94864.1|101911_102415_+	hypothetical protein	NA	A0A2K9V3I7	Faecalibacterium_phage	42.0	4.8e-25
AVQ94865.1|102427_102784_+	hypothetical protein	NA	F6K8R7	Clostridium_phage	37.4	4.0e-10
AVQ94866.1|102780_103380_+	hypothetical protein	NA	B3GW12	Streptococcus_phage	44.6	9.1e-07
AVQ94867.1|103483_106009_+	hypothetical protein	NA	A0A2K9V3J7	Faecalibacterium_phage	40.0	3.2e-37
AVQ94868.1|106021_106567_+|tail	phage tail protein	tail	NA	NA	NA	NA
>prophage 2
CP025286	Ethanoligenens harbinense YUAN-3 chromosome, complete genome	3009515	194801	204921	3009515	tRNA	Klosneuvirus(14.29%)	9	NA	NA
AVQ94942.1|194801_196739_-|tRNA	threonine--tRNA ligase	tRNA	A0A1V0SKZ9	Klosneuvirus	32.2	4.0e-64
AVQ94943.1|197363_197798_+	NfeD family protein	NA	NA	NA	NA	NA
AVQ94944.1|197837_198800_+	SPFH/Band 7/PHB domain protein	NA	A0A0G2YDT0	Acanthamoeba_polyphaga_mimivirus	29.4	3.2e-14
AVQ97300.1|199265_199763_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.1	1.2e-20
AVQ94945.1|199759_200476_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3FUQ7	Synechococcus_phage	43.3	1.2e-45
AVQ94946.1|200588_202085_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.0	2.0e-55
AVQ94947.1|202085_203120_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.4	1.4e-66
AVQ94948.1|203113_203755_+	phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
AVQ94949.1|203751_204921_+	phosphoribosylpyrophosphate synthetase	NA	A0A0K1YAT7	Cronobacter_phage	21.8	2.3e-06
>prophage 3
CP025286	Ethanoligenens harbinense YUAN-3 chromosome, complete genome	3009515	508934	534867	3009515	integrase,capsid,tail	Faecalibacterium_phage(41.67%)	27	508863:508878	510454:510469
508863:508878	attL	CTAAATGATGATTTAT	NA	NA	NA	NA
AVQ95203.1|508934_509927_+|integrase	integrase	integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	30.1	2.1e-40
AVQ95204.1|509940_510477_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
510454:510469	attR	ATAAATCATCATTTAG	NA	NA	NA	NA
AVQ95205.1|510465_511110_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ95206.1|511153_514171_+	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	26.2	7.7e-70
AVQ95207.1|514243_514915_+	restriction endonuclease	NA	NA	NA	NA	NA
AVQ95208.1|515032_515599_-	recombinase	NA	A0A286S1P7	Klebsiella_phage	40.6	2.7e-29
AVQ95209.1|515892_516675_-	peptidase	NA	K7YGS3	Megavirus	35.0	1.7e-29
AVQ95210.1|516677_516932_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ95211.1|518194_518923_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ95212.1|518936_519992_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ95213.1|519991_521269_-|tail	phage tail protein	tail	NA	NA	NA	NA
AVQ95214.1|521268_522174_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ95215.1|522173_522719_-|tail	phage tail protein	tail	NA	NA	NA	NA
AVQ95216.1|522731_525911_-	hypothetical protein	NA	A0A2H4JA91	uncultured_Caudovirales_phage	25.0	2.4e-13
AVQ97326.1|526130_526520_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ95217.1|526516_527125_-	hypothetical protein	NA	B3GW12	Streptococcus_phage	33.3	9.8e-09
AVQ95218.1|527121_527505_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ95219.1|527518_528022_-	hypothetical protein	NA	A0A2K9V3I7	Faecalibacterium_phage	42.8	3.6e-25
AVQ95220.1|528024_528444_-	hypothetical protein	NA	A0A1J1J8Y6	Escherichia_phage	39.0	5.5e-27
AVQ95221.1|528443_528854_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ95222.1|528858_529281_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ95223.1|529277_529646_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ95224.1|529658_530834_-|capsid	phage major capsid protein	capsid	A0A2K9V3F8	Faecalibacterium_phage	62.5	4.4e-106
AVQ95225.1|530846_531386_-	hypothetical protein	NA	A0A2K9V3G1	Faecalibacterium_phage	46.6	3.5e-34
AVQ95226.1|531548_531770_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ95227.1|531772_533443_-|capsid	capsid protein	capsid	A0A2K9V3K1	Faecalibacterium_phage	39.3	4.9e-66
AVQ95228.1|533442_534867_-|capsid	capsid protein	capsid	A0A2K9V3H9	Faecalibacterium_phage	53.7	2.6e-137
>prophage 4
CP025286	Ethanoligenens harbinense YUAN-3 chromosome, complete genome	3009515	1353757	1365804	3009515	transposase	Streptococcus_phage(36.36%)	14	NA	NA
AVQ95890.1|1353757_1355290_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	36.4	3.0e-70
AVQ95891.1|1355355_1355706_-	IS66 family insertion sequence hypothetical protein	NA	S5VXZ8	Leptospira_phage	50.6	1.1e-17
AVQ95892.1|1355705_1356065_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AVQ95893.1|1356384_1357182_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	47.1	2.2e-53
AVQ95894.1|1357178_1358126_-|transposase	transposase	transposase	A0A059NT83	Lactococcus_phage	33.9	6.0e-37
AVQ95895.1|1358439_1358874_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ95896.1|1358920_1359346_-	very short patch repair endonuclease	NA	E5E3X5	Burkholderia_phage	55.0	3.2e-30
AVQ97388.1|1359345_1360599_-	LlaJI family restriction endonuclease	NA	Q6DMW8	Streptococcus_phage	38.7	8.9e-81
AVQ95897.1|1360631_1362359_-	hypothetical protein	NA	Q6DMW9	Streptococcus_phage	45.1	1.9e-81
AVQ95898.1|1362382_1363423_-	DNA (cytosine-5-)-methyltransferase	NA	Q02778	Bacillus_phage	39.0	2.0e-25
AVQ95899.1|1363419_1364736_-	DNA (cytosine-5-)-methyltransferase	NA	M1PSQ0	Streptococcus_phage	32.3	1.4e-39
AVQ95900.1|1364758_1364950_-	DNA-binding protein	NA	A0A1B1IUF9	uncultured_Mediterranean_phage	50.0	9.5e-11
AVQ95901.1|1364964_1365216_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ95902.1|1365345_1365804_+|transposase	IS200/IS605 family transposase ISEha1	transposase	A0A286QN76	Streptococcus_phage	33.1	1.8e-15
>prophage 5
CP025286	Ethanoligenens harbinense YUAN-3 chromosome, complete genome	3009515	1869099	1876050	3009515		Clostridium_phage(33.33%)	8	NA	NA
AVQ96326.1|1869099_1869858_-	3-ketoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.1	7.2e-17
AVQ96327.1|1870099_1871050_+	glycosyltransferase	NA	I1TED8	Salmonella_phage	37.5	1.3e-47
AVQ96328.1|1871445_1872534_-	glycerol dehydrogenase	NA	NA	NA	NA	NA
AVQ96329.1|1872714_1873569_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	31.2	2.5e-34
AVQ96330.1|1874013_1875321_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.6	5.2e-55
AVQ96331.1|1875317_1875578_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ96332.1|1875636_1875810_-	Arc family DNA-binding protein	NA	A0A0A8WG21	Clostridium_phage	54.7	2.1e-09
AVQ96333.1|1875876_1876050_-	Arc family DNA-binding protein	NA	A0A0A8WG21	Clostridium_phage	58.2	9.6e-10
>prophage 6
CP025286	Ethanoligenens harbinense YUAN-3 chromosome, complete genome	3009515	1953131	1983998	3009515	tail,head,protease,capsid,portal,terminase	Erysipelothrix_phage(42.31%)	37	NA	NA
AVQ96399.1|1953131_1955138_-	SAM-dependent DNA methyltransferase	NA	A0A220A2U5	Liberibacter_phage	29.0	2.2e-20
AVQ97444.1|1955228_1955414_-	helix-turn-helix domain-containing protein	NA	A0A1B1IUF9	uncultured_Mediterranean_phage	46.9	1.0e-09
AVQ96400.1|1955436_1956294_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ96401.1|1956533_1956725_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ96402.1|1957017_1957518_+	bacterio-opsin activator	NA	NA	NA	NA	NA
AVQ96403.1|1957800_1958133_+	DNA ligase	NA	A0A2K5B2A7	Erysipelothrix_phage	36.4	3.5e-08
AVQ96404.1|1958122_1959265_+	DUF2800 domain-containing protein	NA	A0A1X9I6D8	Streptococcus_phage	58.8	1.7e-126
AVQ96405.1|1959257_1959836_+	DUF2815 domain-containing protein	NA	M1PLM6	Streptococcus_phage	74.2	1.0e-71
AVQ96406.1|1959848_1960046_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ97445.1|1960124_1962113_+	DNA polymerase I	NA	A0A2K5B2B0	Erysipelothrix_phage	64.0	2.3e-256
AVQ96407.1|1962209_1962632_+	hypothetical protein	NA	A0A2K5B270	Erysipelothrix_phage	51.9	1.3e-36
AVQ96408.1|1962574_1964884_+	DNA primase	NA	A0A1X9I6B6	Streptococcus_phage	37.8	5.4e-47
AVQ96409.1|1965128_1965686_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ96410.1|1965682_1965970_+	VRR-NUC domain-containing protein	NA	M1PFY8	Streptococcus_phage	60.7	7.1e-26
AVQ96411.1|1965947_1966460_+	HNH endonuclease	NA	A0A2I7QIM4	Bacillus_phage	39.0	1.3e-22
AVQ96412.1|1966443_1967796_+	ATP-dependent helicase	NA	A0A2K5B273	Erysipelothrix_phage	66.6	2.2e-154
AVQ96413.1|1967792_1968014_+	hypothetical protein	NA	A0A2K5B274	Erysipelothrix_phage	59.2	3.9e-16
AVQ96414.1|1968010_1968424_+	DUF1492 domain-containing protein	NA	NA	NA	NA	NA
AVQ96415.1|1968578_1968932_+	HNH endonuclease	NA	A0A2K5B276	Erysipelothrix_phage	59.8	1.9e-36
AVQ96416.1|1969068_1969620_+|terminase	terminase	terminase	A0A2K5B277	Erysipelothrix_phage	62.3	1.4e-57
AVQ96417.1|1969620_1970883_+	DNA methylase	NA	A0A1B0RXJ0	Streptococcus_phage	41.9	6.9e-97
AVQ97446.1|1971650_1972382_+	virulence protein	NA	A0A2K5B280	Erysipelothrix_phage	43.6	3.8e-47
AVQ96418.1|1972378_1972603_+	DUF4314 domain-containing protein	NA	A0A2K5B281	Erysipelothrix_phage	64.2	5.0e-19
AVQ96419.1|1972604_1972790_+	DUF5049 domain-containing protein	NA	NA	NA	NA	NA
AVQ96420.1|1972910_1973387_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ96421.1|1973389_1973617_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ96422.1|1973736_1975344_+|terminase	terminase large subunit	terminase	A0A2K5B285	Erysipelothrix_phage	81.9	2.9e-265
AVQ96423.1|1975422_1976769_+|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	76.0	1.1e-185
AVQ96424.1|1976765_1977512_+|protease	Clp protease ClpP	protease	Q6DMU1	Streptococcus_phage	60.2	1.2e-69
AVQ96425.1|1977531_1978737_+|capsid	phage major capsid protein	capsid	Q6DMU0	Streptococcus_phage	62.3	1.1e-144
AVQ96426.1|1978805_1979084_+|head,tail	phage gp6-like head-tail connector protein	head,tail	M1PSE8	Streptococcus_phage	43.5	3.7e-11
AVQ96427.1|1979083_1979416_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
AVQ96428.1|1979412_1979793_+	hypothetical protein	NA	Q9AZY1	Lactococcus_phage	33.1	5.9e-12
AVQ96429.1|1979789_1980116_+	hypothetical protein	NA	D2XR22	Bacillus_phage	47.7	1.2e-21
AVQ96430.1|1980121_1980718_+|tail	phage tail protein	tail	A0A0U4JWV5	Exiguobacterium_phage	50.5	5.8e-46
AVQ96431.1|1980729_1981107_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ96432.1|1981283_1983998_+|tail	phage tail tape measure protein	tail	Q6DMT2	Streptococcus_phage	30.2	5.0e-44
>prophage 7
CP025286	Ethanoligenens harbinense YUAN-3 chromosome, complete genome	3009515	1987290	1996114	3009515	holin	Erysipelothrix_phage(85.71%)	8	NA	NA
AVQ96433.1|1987290_1987485_+	hypothetical protein	NA	A0A2K5B299	Erysipelothrix_phage	58.5	2.2e-15
AVQ96434.1|1987487_1988069_+	hypothetical protein	NA	A0A2K5B2A0	Erysipelothrix_phage	47.6	3.7e-45
AVQ96435.1|1988065_1990546_+	glycosyl hydrolase	NA	A0A2K5B2A1	Erysipelothrix_phage	68.3	0.0e+00
AVQ96436.1|1990633_1991047_+|holin	holin	holin	A0A2K5B2A2	Erysipelothrix_phage	71.3	1.3e-49
AVQ96437.1|1991049_1992000_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A2K5B2A3	Erysipelothrix_phage	43.3	2.5e-51
AVQ96438.1|1992121_1992544_+	RNA polymerase subunit sigma-70	NA	NA	NA	NA	NA
AVQ96439.1|1992758_1994552_+	recombinase family protein	NA	A0A2K5B2B4	Erysipelothrix_phage	43.2	2.8e-75
AVQ96440.1|1994530_1996114_+	recombinase family protein	NA	Q6DMS5	Streptococcus_phage	52.3	1.4e-147
