The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027846	Staphylococcus kloosii strain ATCC 43959 chromosome, complete genome	2630191	1270656	1313481	2630191	terminase,holin,tail,portal,integrase,protease,plate,capsid,head	uncultured_Caudovirales_phage(43.18%)	55	1270441:1270457	1314973:1314989
1270441:1270457	attL	AACCCGACCACCGGTAT	NA	NA	NA	NA
AVQ35761.1|1270656_1271703_-|integrase	integrase	integrase	A0A1W6JQE7	Staphylococcus_phage	34.5	3.6e-51
AVQ35762.1|1271757_1272384_-	hypothetical protein	NA	A0A1W6JQ94	Staphylococcus_phage	36.5	4.7e-14
AVQ35763.1|1272527_1273166_-	helix-turn-helix domain-containing protein	NA	U3PBN8	Staphylococcus_phage	84.4	4.4e-100
AVQ35764.1|1273358_1273613_+	XRE family transcriptional regulator	NA	B7T095	Staphylococcus_virus	77.9	3.9e-28
AVQ35765.1|1273927_1274590_-	hypothetical protein	NA	A0A2I6PDF5	Staphylococcus_phage	35.0	1.5e-23
AVQ35766.1|1274654_1274948_+	DUF771 domain-containing protein	NA	Q4ZCA6	Staphylococcus_virus	66.0	2.6e-31
AVQ35767.1|1274963_1275146_+	DUF1270 domain-containing protein	NA	NA	NA	NA	NA
AVQ35768.1|1275213_1275477_+	DUF1108 domain-containing protein	NA	NA	NA	NA	NA
AVQ35769.1|1275473_1275704_+	DUF2483 domain-containing protein	NA	A0A0E3TAJ7	Staphylococcus_phage	87.7	3.6e-28
AVQ35770.1|1275687_1276380_+	DNA-binding protein	NA	A0A1W6JQH5	Staphylococcus_phage	73.1	2.3e-94
AVQ35771.1|1276372_1277788_+	ATP-dependent helicase	NA	A0A2H4JBR2	uncultured_Caudovirales_phage	73.6	7.0e-199
AVQ35772.1|1277802_1278369_+	DUF669 domain-containing protein	NA	A0A2H4JGZ0	uncultured_Caudovirales_phage	77.7	1.9e-78
AVQ35773.1|1278349_1280656_+	DNA primase	NA	A0A2H4J4H0	uncultured_Caudovirales_phage	83.2	0.0e+00
AVQ35774.1|1280936_1281143_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ35775.1|1281139_1281478_+	VRR-NUC domain-containing protein	NA	A0A2H4JAY8	uncultured_Caudovirales_phage	76.5	2.4e-41
AVQ35776.1|1281455_1281647_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ35777.1|1281649_1281886_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ35778.1|1281882_1282560_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ37092.1|1282619_1283030_+	DUF3310 domain-containing protein	NA	A0A2H4J3I9	uncultured_Caudovirales_phage	65.5	7.8e-34
AVQ37093.1|1283041_1283725_+	SAM-dependent DNA methyltransferase	NA	B7T0H3	Staphylococcus_virus	67.3	1.4e-83
AVQ35779.1|1283721_1283916_+	hypothetical protein	NA	Q4ZA43	Staphylococcus_virus	42.6	2.7e-05
AVQ35780.1|1283921_1284377_+	hypothetical protein	NA	A0A173GAT5	Staphylococcus_phage	37.2	3.8e-13
AVQ35781.1|1284485_1285037_+	hypothetical protein	NA	Q4ZBT4	Staphylococcus_virus	49.5	1.8e-17
AVQ35782.1|1285189_1285687_+	dUTP pyrophosphatase	NA	A0A2H4JAL9	uncultured_Caudovirales_phage	70.9	1.2e-60
AVQ35783.1|1286164_1286365_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ35784.1|1286533_1286794_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ35785.1|1286795_1286978_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ35786.1|1287141_1287585_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ35787.1|1287588_1287777_+	transcriptional regulator	NA	H9A0T9	Staphylococcus_phage	51.0	1.1e-06
AVQ35788.1|1287777_1288191_+	DUF1492 domain-containing protein	NA	A0A2H4J5D4	uncultured_Caudovirales_phage	33.3	1.0e-04
AVQ35789.1|1288302_1288620_+	HNH endonuclease	NA	A0A2H4J5U5	uncultured_Caudovirales_phage	83.2	1.1e-46
AVQ35790.1|1288871_1289237_+	hypothetical protein	NA	A0A2H4J959	uncultured_Caudovirales_phage	80.2	1.9e-47
AVQ35791.1|1289233_1290886_+|terminase	terminase large subunit	terminase	A0A2H4J6U3	uncultured_Caudovirales_phage	90.7	4.2e-304
AVQ35792.1|1290904_1292077_+|portal	phage portal protein	portal	A0A2H4J9T2	uncultured_Caudovirales_phage	86.6	3.4e-191
AVQ35793.1|1292057_1292837_+|protease	Clp protease ClpP	protease	A0A1W6JQA0	Staphylococcus_phage	74.6	2.6e-102
AVQ35794.1|1292854_1294066_+|capsid	phage major capsid protein	capsid	A0A1W6JQD9	Staphylococcus_phage	89.1	1.4e-203
AVQ35795.1|1294259_1294547_+	hypothetical protein	NA	A0A1W6JQ66	Staphylococcus_phage	77.9	1.1e-34
AVQ37094.1|1294530_1294881_+|head,tail	phage head-tail adapter protein	head,tail	A0A1W6JQ73	Staphylococcus_phage	72.6	2.4e-44
AVQ35796.1|1294877_1295273_+	hypothetical protein	NA	A0A2H4JA97	uncultured_Caudovirales_phage	61.1	5.2e-43
AVQ35797.1|1295272_1295695_+	hypothetical protein	NA	A0A2H4J6T2	uncultured_Caudovirales_phage	67.2	3.8e-44
AVQ35798.1|1295733_1296372_+|tail	phage tail protein	tail	A0A1W6JQ47	Staphylococcus_phage	78.4	3.7e-83
AVQ35799.1|1296478_1296811_+	hypothetical protein	NA	A0A2H4JAA8	uncultured_Caudovirales_phage	60.0	2.8e-26
AVQ35800.1|1297095_1302630_+	peptidase M23	NA	A0A1W6JQA9	Staphylococcus_phage	68.1	3.1e-295
AVQ35801.1|1302645_1303470_+|tail	phage tail family protein	tail	A0A2H4J7E0	uncultured_Caudovirales_phage	54.5	7.7e-81
AVQ35802.1|1303478_1305065_+	peptidase	NA	A0A1W6JQ67	Staphylococcus_phage	55.8	3.9e-174
AVQ35803.1|1305057_1305624_+	hypothetical protein	NA	A0A249Y1Z4	Staphylococcus_phage	36.1	4.7e-05
AVQ35804.1|1305636_1307571_+	hypothetical protein	NA	R4WAL5	Staphylococcus_phage	43.7	3.6e-145
AVQ35805.1|1307586_1309068_+|plate	phage baseplate upper protein	plate	A0A2I6PEI6	Staphylococcus_phage	35.2	1.0e-75
AVQ35806.1|1309067_1309472_+	DUF2977 domain-containing protein	NA	NA	NA	NA	NA
AVQ35807.1|1309446_1309608_+	XkdX family protein	NA	A0A2H4J5I2	uncultured_Caudovirales_phage	88.7	2.3e-21
AVQ35808.1|1309644_1310088_+	hypothetical protein	NA	A0A2H4JB99	uncultured_Caudovirales_phage	57.9	5.8e-43
AVQ35809.1|1310060_1310474_+	hypothetical protein	NA	A0A2H4J2M0	uncultured_Caudovirales_phage	65.7	5.4e-43
AVQ35810.1|1310512_1310770_+|holin	phage holin	holin	A1BU76	Staphylococcus_virus	70.7	1.2e-27
AVQ35811.1|1310769_1312143_+	CHAP domain-containing protein	NA	A0A2H4J4H5	uncultured_Caudovirales_phage	65.3	1.1e-180
AVQ35812.1|1313025_1313481_+	DUF4065 domain-containing protein	NA	A0A0N9SGM1	Paenibacillus_phage	41.1	1.0e-18
1314973:1314989	attR	AACCCGACCACCGGTAT	NA	NA	NA	NA
>prophage 2
CP027846	Staphylococcus kloosii strain ATCC 43959 chromosome, complete genome	2630191	1389229	1422661	2630191	tRNA	Staphylococcus_phage(96.15%)	35	NA	NA
AVQ35876.1|1389229_1390627_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	58.9	1.2e-161
AVQ35877.1|1390639_1391644_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	50.9	1.2e-88
AVQ35878.1|1391633_1391876_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	67.1	2.1e-26
AVQ35879.1|1391931_1392408_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	52.5	1.5e-41
AVQ37097.1|1392415_1393186_+	dipeptidyl aminopeptidase	NA	A0A2H4PQM6	Staphylococcus_phage	67.8	1.4e-92
AVQ35880.1|1393248_1394841_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	79.8	4.1e-256
AVQ35881.1|1395219_1396416_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	85.9	8.3e-193
AVQ35882.1|1396509_1397418_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	79.7	1.5e-101
AVQ35883.1|1397662_1398499_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	64.3	1.1e-103
AVQ35884.1|1398566_1398923_-	CrcB family protein	NA	NA	NA	NA	NA
AVQ35885.1|1398922_1399288_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	61.2	2.8e-35
AVQ35886.1|1399348_1399654_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ35887.1|1399933_1400647_+	transaldolase	NA	H8ZNI7	Synechococcus_phage	37.4	1.1e-19
AVQ35888.1|1400892_1401726_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AVQ35889.1|1401858_1402308_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	41.8	1.8e-20
AVQ35890.1|1402314_1402743_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ37098.1|1402747_1403191_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	43.9	9.6e-22
AVQ35891.1|1403439_1403664_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ35892.1|1403802_1404663_+	autolysin	NA	A0A1W6JNR1	Staphylococcus_phage	41.3	4.6e-36
AVQ35893.1|1404877_1405801_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVQ35894.1|1405981_1407448_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	62.5	3.5e-12
AVQ35895.1|1407889_1408933_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	64.1	2.0e-126
AVQ35896.1|1408939_1409572_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	61.4	3.0e-69
AVQ35897.1|1409582_1410764_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	70.2	3.7e-161
AVQ35898.1|1410776_1411241_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	75.3	5.1e-58
AVQ35899.1|1411476_1412478_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	67.9	1.8e-124
AVQ35900.1|1412711_1413542_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AVQ35901.1|1413716_1414676_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
AVQ35902.1|1414830_1415232_+	transcriptional regulator	NA	NA	NA	NA	NA
AVQ35903.1|1415344_1415905_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	63.2	1.4e-65
AVQ35904.1|1415901_1416855_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	87.2	6.0e-69
AVQ35905.1|1416961_1418140_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	74.0	3.2e-157
AVQ35906.1|1418445_1420860_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	84.7	0.0e+00
AVQ35907.1|1420881_1421193_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	66.0	1.1e-32
AVQ35908.1|1421395_1422661_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	78.3	8.3e-42
>prophage 3
CP027846	Staphylococcus kloosii strain ATCC 43959 chromosome, complete genome	2630191	1541881	1553362	2630191	tRNA	uncultured_Mediterranean_phage(57.14%)	8	NA	NA
AVQ36015.1|1541881_1542880_+	Holliday junction branch migration DNA helicase RuvB	NA	E3T4M7	Cafeteria_roenbergensis_virus	25.7	1.7e-05
AVQ36016.1|1542885_1543911_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AVQ36017.1|1543933_1545073_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.1	2.4e-85
AVQ36018.1|1545088_1545349_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	44.3	3.7e-05
AVQ36019.1|1545572_1547849_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	33.7	2.5e-28
AVQ36020.1|1548001_1550278_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.3	1.8e-71
AVQ36021.1|1550295_1550814_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	3.6e-28
AVQ36022.1|1551172_1553362_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	35.9	5.0e-10
>prophage 4
CP027846	Staphylococcus kloosii strain ATCC 43959 chromosome, complete genome	2630191	1675507	1685398	2630191		uncultured_Mediterranean_phage(28.57%)	11	NA	NA
AVQ36147.1|1675507_1676395_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	30.3	3.6e-36
AVQ36148.1|1676449_1676956_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
AVQ36149.1|1677052_1677787_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	24.0	2.0e-08
AVQ36150.1|1677770_1678319_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	28.3	7.5e-08
AVQ36151.1|1678311_1679046_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AVQ36152.1|1679178_1679904_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	41.3	7.0e-46
AVQ37106.1|1679887_1681633_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	25.2	4.4e-17
AVQ36153.1|1681920_1682463_+	ECF transporter S component	NA	NA	NA	NA	NA
AVQ36154.1|1682709_1682958_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	49.3	1.3e-15
AVQ36155.1|1683069_1684029_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ36156.1|1684018_1685398_+	ATP-dependent DNA helicase RecQ	NA	M1PGQ0	Moumouvirus	34.0	3.2e-55
>prophage 5
CP027846	Staphylococcus kloosii strain ATCC 43959 chromosome, complete genome	2630191	2138281	2181527	2630191	holin,terminase,tail,portal,integrase,protease,capsid,head	uncultured_Caudovirales_phage(55.1%)	65	2155486:2155501	2181989:2182004
AVQ36569.1|2138281_2139760_-	CHAP domain-containing protein	NA	A0A249Y173	Staphylococcus_phage	60.1	2.8e-166
AVQ36570.1|2139746_2140229_-|holin	phage holin	holin	U3PJ27	Staphylococcus_phage	75.2	1.8e-45
AVQ36571.1|2140271_2140667_-	hypothetical protein	NA	A0A2H4JCM1	uncultured_Caudovirales_phage	70.8	1.5e-42
AVQ36572.1|2140653_2141076_-	hypothetical protein	NA	A0A2H4JID2	uncultured_Caudovirales_phage	75.0	1.7e-60
AVQ36573.1|2141112_2141271_-	XkdX family protein	NA	A0A2H4J5I2	uncultured_Caudovirales_phage	92.3	6.9e-23
AVQ36574.1|2141245_2141650_-	DUF2977 domain-containing protein	NA	NA	NA	NA	NA
AVQ36575.1|2141649_2143134_-	DUF2479 domain-containing protein	NA	A0A2I6PEI6	Staphylococcus_phage	32.7	3.1e-64
AVQ36576.1|2143147_2145085_-	hypothetical protein	NA	R4WAL5	Staphylococcus_phage	40.3	5.9e-132
AVQ36577.1|2145108_2145387_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ36578.1|2145402_2146995_-	peptidase	NA	A0A2H4J5K5	uncultured_Caudovirales_phage	58.4	3.0e-182
AVQ36579.1|2147003_2147828_-|tail	phage tail family protein	tail	A0A1W6JQE9	Staphylococcus_phage	51.3	1.4e-77
AVQ36580.1|2147827_2152354_-|tail	phage tail tape measure protein	tail	A0A2H4JA90	uncultured_Caudovirales_phage	70.8	0.0e+00
AVQ36581.1|2152568_2152931_-	hypothetical protein	NA	A0A2H4JD82	uncultured_Caudovirales_phage	93.3	6.8e-58
AVQ36582.1|2153003_2153498_-|tail	phage tail protein	tail	A0A1D6Z291	Staphylococcus_phage	56.7	5.0e-35
AVQ36583.1|2153591_2154188_-|tail	phage tail protein	tail	A0A2H4JH93	uncultured_Caudovirales_phage	94.1	1.5e-97
AVQ36584.1|2154200_2154605_-	hypothetical protein	NA	A0A2H4JEG7	uncultured_Caudovirales_phage	86.6	7.1e-64
AVQ36585.1|2154605_2155016_-	hypothetical protein	NA	A0A2H4J3L8	uncultured_Caudovirales_phage	62.5	7.8e-42
AVQ36586.1|2155012_2155342_-	hypothetical protein	NA	A0A2H4JGE5	uncultured_Caudovirales_phage	84.4	2.8e-50
AVQ36587.1|2155331_2155673_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4J5J4	uncultured_Caudovirales_phage	84.1	1.2e-48
2155486:2155501	attL	TTTAAAACAGCTAAAT	NA	NA	NA	NA
AVQ36588.1|2155744_2157088_-|capsid	phage major capsid protein	capsid	A0A2H4J411	uncultured_Caudovirales_phage	86.9	1.7e-141
AVQ36589.1|2157130_2157688_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4J792	uncultured_Caudovirales_phage	62.9	3.7e-63
AVQ36590.1|2157674_2158910_-|portal	phage portal protein	portal	A0A2H4JB06	uncultured_Caudovirales_phage	87.8	4.5e-210
AVQ36591.1|2158912_2159098_-	hypothetical protein	NA	A0A2H4JD76	uncultured_Caudovirales_phage	73.2	1.6e-15
AVQ36592.1|2159110_2160850_-|terminase	terminase large subunit	terminase	A0A2H4J5G3	uncultured_Caudovirales_phage	74.5	1.6e-258
AVQ36593.1|2160830_2161316_-|terminase	phage terminase small subunit P27 family	terminase	A0A0D4DCN9	Staphylococcus_phage	63.5	5.7e-52
AVQ36594.1|2161465_2161816_-	HNH endonuclease	NA	H9A108	Staphylococcus_phage	81.4	4.6e-51
AVQ36595.1|2162414_2162831_-	DUF722 domain-containing protein	NA	I6TJX2	Staphylococcus_virus	65.2	1.1e-46
AVQ36596.1|2162844_2163057_-	hypothetical protein	NA	A0A2H4J2V9	uncultured_Caudovirales_phage	62.9	2.4e-15
AVQ36597.1|2163058_2163247_-	transcriptional regulator	NA	A0A2H4JHD4	uncultured_Caudovirales_phage	71.1	2.2e-07
AVQ36598.1|2163499_2164006_-	dUTP pyrophosphatase	NA	A0A2H4JAL9	uncultured_Caudovirales_phage	71.6	1.3e-62
AVQ36599.1|2164007_2164280_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ36600.1|2164276_2164516_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ36601.1|2164512_2164758_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ36602.1|2164763_2164958_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ36603.1|2164954_2165188_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ36604.1|2165190_2165412_-	DUF3310 domain-containing protein	NA	A0A2H4J3I9	uncultured_Caudovirales_phage	88.6	3.9e-32
AVQ36605.1|2165411_2165606_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ36606.1|2165607_2166000_-	hypothetical protein	NA	U3PG42	Staphylococcus_phage	72.5	1.5e-13
AVQ36607.1|2166002_2166194_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ36608.1|2166199_2166601_-	DUF1064 domain-containing protein	NA	A0A2H4J5N5	uncultured_Caudovirales_phage	76.7	9.2e-56
AVQ36609.1|2166614_2166863_-	hypothetical protein	NA	NA	NA	NA	NA
AVQ36610.1|2166859_2167060_-	hypothetical protein	NA	A0A2H4JDU0	uncultured_Caudovirales_phage	67.2	1.3e-18
AVQ36611.1|2167056_2168298_-	damage-inducible protein	NA	U3PG36	Staphylococcus_phage	87.7	2.8e-204
AVQ36612.1|2168281_2168650_-	hypothetical protein	NA	A0A2H4J7Z2	uncultured_Caudovirales_phage	76.5	1.7e-48
AVQ36613.1|2168655_2169384_-	DNA replication protein DnaD	NA	A0A1W6JQ30	Staphylococcus_phage	59.3	9.9e-48
AVQ36614.1|2169370_2170051_-	hypothetical protein	NA	A0A2H4J972	uncultured_Caudovirales_phage	76.3	1.6e-100
AVQ36615.1|2170064_2170448_-	single-stranded DNA-binding protein	NA	H9A0R6	Staphylococcus_phage	66.2	1.2e-44
AVQ36616.1|2170447_2171104_-	single-stranded DNA-binding protein	NA	A0A2H4JAI6	uncultured_Caudovirales_phage	66.5	3.0e-80
AVQ36617.1|2171096_2171318_-	DUF2483 domain-containing protein	NA	A0A1X9H047	Staphylococcus_phage	74.0	1.1e-23
AVQ36618.1|2171289_2171568_-	hypothetical protein	NA	A0A2H4J7G4	uncultured_Caudovirales_phage	60.9	4.9e-24
AVQ36619.1|2171828_2172038_-	hypothetical protein	NA	A0A1W6JQ31	Staphylococcus_phage	81.2	6.1e-27
AVQ36620.1|2172101_2172587_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ36621.1|2172728_2173478_-	Rha family transcriptional regulator	NA	A0A2H4J8U5	uncultured_Caudovirales_phage	70.7	7.2e-94
AVQ36622.1|2173519_2173720_-	XRE family transcriptional regulator	NA	Q4ZC38	Staphylococcus_virus	90.6	2.9e-26
AVQ36623.1|2173885_2174221_+	XRE family transcriptional regulator	NA	Q4ZC39	Staphylococcus_virus	73.6	2.6e-35
AVQ36624.1|2174233_2174698_+	ImmA/IrrE family metallo-endopeptidase	NA	Q4ZC40	Staphylococcus_virus	60.8	9.7e-49
AVQ36625.1|2174712_2175693_+	hypothetical protein	NA	A0A1Q1PVZ4	Staphylococcus_phage	73.4	4.3e-131
AVQ36626.1|2176113_2176311_+	hypothetical protein	NA	A0A1P8L6H3	Staphylococcus_phage	58.1	2.2e-10
AVQ36627.1|2176311_2176908_-	hypothetical protein	NA	A0A1J0MFK1	Staphylococcus_phage	59.4	9.2e-52
AVQ36628.1|2177022_2178072_+|integrase	site-specific integrase	integrase	A0A1W6JPZ8	Staphylococcus_phage	89.4	3.2e-180
AVQ37113.1|2178437_2179001_-	competence protein ComK	NA	NA	NA	NA	NA
AVQ36629.1|2179245_2179464_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
AVQ36630.1|2179544_2180534_-	lipoate--protein ligase	NA	NA	NA	NA	NA
AVQ36631.1|2180733_2180919_+	DUF2187 domain-containing protein	NA	NA	NA	NA	NA
AVQ36632.1|2180924_2181527_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
2181989:2182004	attR	ATTTAGCTGTTTTAAA	NA	NA	NA	NA
>prophage 6
CP027846	Staphylococcus kloosii strain ATCC 43959 chromosome, complete genome	2630191	2375663	2384634	2630191		uncultured_Caudovirales_phage(33.33%)	7	NA	NA
AVQ36814.1|2375663_2377769_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	90.2	0.0e+00
AVQ36815.1|2377731_2378130_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	70.5	1.4e-48
AVQ36816.1|2378796_2379678_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AVQ36817.1|2379702_2380203_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	65.6	3.5e-52
AVQ36818.1|2380359_2381874_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	33.7	2.7e-55
AVQ36819.1|2382079_2383585_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	33.9	1.0e-62
AVQ36820.1|2383704_2384634_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	26.2	6.1e-10
>prophage 7
CP027846	Staphylococcus kloosii strain ATCC 43959 chromosome, complete genome	2630191	2398412	2405416	2630191		Pandoravirus(16.67%)	9	NA	NA
AVQ36832.1|2398412_2399552_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.5	3.1e-24
AVQ36833.1|2399535_2400129_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	41.4	3.2e-36
AVQ36834.1|2400365_2401040_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	56.3	2.6e-63
AVQ36835.1|2401039_2401465_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
AVQ36836.1|2401457_2402174_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	42.2	4.2e-51
AVQ36837.1|2402429_2403017_+	hypothetical protein	NA	NA	NA	NA	NA
AVQ36838.1|2403087_2403339_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AVQ36839.1|2403544_2403997_+	hypothetical protein	NA	Q9MBP7	Staphylococcus_prophage	65.7	1.4e-52
AVQ36840.1|2404381_2405416_-	glycosyltransferase	NA	A0A192Y8W7	Salmonella_phage	43.5	1.3e-61
